BLASTX nr result
ID: Mentha22_contig00049003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00049003
(484 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 258 8e-67
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 206 2e-51
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus... 198 6e-49
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 165 5e-39
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 163 3e-38
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 158 9e-37
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 157 1e-36
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 154 2e-35
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 153 3e-35
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 152 4e-35
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 151 1e-34
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 149 3e-34
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 149 5e-34
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 143 3e-32
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 142 4e-32
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 142 4e-32
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 138 7e-31
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 137 2e-30
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas... 136 3e-30
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 131 9e-29
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 258 bits (658), Expect = 8e-67
Identities = 120/160 (75%), Positives = 134/160 (83%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LSH+RK +FKGFYLS+ HSLEEIIIRPVD YRV GIM+R DCMG LESW+
Sbjct: 76 LSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAGIMIRADCMGTLESWN 135
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G LWFMPERKK+HFFV H ESYKLEVQFGD+LESR CC G + KVD+ILLKL+HAPK
Sbjct: 136 GMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAILLKLRHAPK 195
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+FKK++GPKIASRFTTDRYHICKEDYDF+WVRTTDFSSMK
Sbjct: 196 IFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMK 235
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 206 bits (525), Expect = 2e-51
Identities = 94/160 (58%), Positives = 121/160 (75%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS RKL+FKG YL ++HS E+II RPVD R+ GIM++GDCMG+LESW+
Sbjct: 41 LSEERKLVFKGHYLCVSHSFEDIITRPVDPENRLENAAGLCLLAGIMLKGDCMGILESWN 100
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G LW +PERKKL F+ +E ESYKLE+Q+GDI E+ CC NGD ++++ILLKLKHAPK
Sbjct: 101 GCKLWVLPERKKLLLFLDNEEESYKLEIQYGDICETHLCCSNGDGDEINAILLKLKHAPK 160
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
VF+KI+GP + S+F +DRY+IC +D DF+WVRTTDFS K
Sbjct: 161 VFRKISGPDVTSKFASDRYNICIQDMDFIWVRTTDFSEKK 200
>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
Length = 1135
Score = 198 bits (504), Expect = 6e-49
Identities = 102/161 (63%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS LIFKGF LSI S E++IIRPVD RV G+MVR +CM VLE+W
Sbjct: 71 LSEQGNLIFKGFRLSILPSSEDVIIRPVDPTNRVGNCAGSGFVAGVMVRDNCMAVLENWV 130
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G LWFMPERK+L F V ++ ESYKLEVQFGD+ ES RCC + +KVD+ILLKLKHAPK
Sbjct: 131 G-DLWFMPERKRLDFVVIYDGESYKLEVQFGDVAESGRCCLDRGGEKVDAILLKLKHAPK 189
Query: 122 VFKKIAGPKIASRF-TTDRYHICKEDYDFLWVRTTDFSSMK 3
V+KKI+GPK++SRF TDRY ICKED+DF WVRTTDFS +K
Sbjct: 190 VYKKISGPKVSSRFPATDRYRICKEDFDFAWVRTTDFSKVK 230
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 165 bits (418), Expect = 5e-39
Identities = 80/160 (50%), Positives = 111/160 (69%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS L+FK L ++ + ++II RPVD + R+ MV+GDCM +LESW+
Sbjct: 70 LSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAG---FMVKGDCMSMLESWE 126
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPERK++ F+V E YKLE+ F +I+ES C G+ KV+++LLKLK P+
Sbjct: 127 GVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGE--KVNALLLKLKFGPR 184
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+F+KI+GP +A+RF+TDRYH+CK+D+DFLWVRTTDFS MK
Sbjct: 185 IFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMK 224
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 163 bits (412), Expect = 3e-38
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS L+F+G LSI+ + ++II+RPV+ R +V +V DCM VLESW+
Sbjct: 70 LSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVG---FLVEDDCMLVLESWE 126
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G MPER ++ F+V + E YKLEV F D+LES CC G KV+++LLKLK+APK
Sbjct: 127 GVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGG--KVNALLLKLKYAPK 184
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+F+K AGP IAS+F+ DRYHI KED +FLW+RTTDFSS+K
Sbjct: 185 IFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIK 224
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 158 bits (399), Expect = 9e-37
Identities = 77/160 (48%), Positives = 108/160 (67%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS L+FKG LS+ S ++II RPV+ + R ++V+ D M VLE+W+
Sbjct: 72 LSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTG---LLVKNDVMQVLETWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
MPERK L F+V H E Y+LEVQFGD++E+ C E + ++LLKLKHAPK
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSL---ENQKSALLLKLKHAPK 185
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++++++GP +AS+F+ DRYHICKED +FLWVRTTDFS++K
Sbjct: 186 LYQRVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIK 225
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 157 bits (397), Expect = 1e-36
Identities = 79/161 (49%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+FKG L + S ++II RP++ YR I++ D M VLE+W+
Sbjct: 72 LSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTG---ILLENDYMEVLETWE 128
Query: 302 GATLWFMPERKKLHFFVKHER-ESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAP 126
MPERK L F+V H + E Y+LEVQFGDI+E+ C DEK ++LLKLKHAP
Sbjct: 129 NVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLE-DEKT--ALLLKLKHAP 185
Query: 125 KVFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
K++++++GP +AS+F++DRYH+C+ED +FLWVRTTDFS+MK
Sbjct: 186 KLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMK 226
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum
lycopersicum]
Length = 1119
Score = 154 bits (388), Expect = 2e-35
Identities = 75/160 (46%), Positives = 105/160 (65%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
L+ L+FKG LS+ S ++II RPV+ + R ++V D M VLE+W+
Sbjct: 72 LAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTG---LLVEKDVMQVLETWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
MPERK L F+V H E Y+LEVQFGD+ E C E + ++LLKLKHAPK
Sbjct: 129 DVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSV---ENQKSALLLKLKHAPK 185
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++++++GP +AS+F+ DRYHICKED +FLW+RTTDFS++K
Sbjct: 186 LYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIK 225
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca
subsp. vesca]
Length = 1136
Score = 153 bits (386), Expect = 3e-35
Identities = 73/160 (45%), Positives = 106/160 (66%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS + L FK L + + ++II RP+D R+R+ +V + M VLESW+
Sbjct: 73 LSSSADLFFKSHNLRLFEAHDDIIPRPLDPRHRLNSTVLHAG---FVVNDETMSVLESWE 129
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPERK++ F+V + YK+E+ F +I+ES CC GD KV+++ LKLK PK
Sbjct: 130 GVRAWVMPERKRVEFWVWRVGDCYKMEIAFENIVESVGCCLGGD--KVNALRLKLKFGPK 187
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+F++++GP +AS+F+ DRYH+CKED+D+LWVR TDFS MK
Sbjct: 188 IFRQLSGPNVASKFSADRYHVCKEDFDYLWVRCTDFSEMK 227
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 152 bits (385), Expect = 4e-35
Identities = 72/160 (45%), Positives = 103/160 (64%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+FK L ++ + ++II RPVD R R+ + C LE WD
Sbjct: 73 LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRRRLDDIVLTVGFPESDEKRFC--ALEKWD 130
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W + E+++L F+V E YK+EV+F DI+E+ CC NGD + ++ LLKLK+ PK
Sbjct: 131 GVRCWILEEKRRLEFWVWENGECYKIEVRFEDIVETLCCCVNGDASETNAFLLKLKYGPK 190
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
VFK+++GP IA++F +DRY CKED+DF+W+RTTDFS +K
Sbjct: 191 VFKRVSGPHIATKFKSDRYQFCKEDFDFMWIRTTDFSGLK 230
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 151 bits (381), Expect = 1e-34
Identities = 71/160 (44%), Positives = 108/160 (67%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS + L+FK L ++ + ++II RP+ A +R+ M DC+ VLE W+
Sbjct: 72 LSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAG---FMSSDDCLRVLERWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPER++L F+V + E YKL+ F DI E+ CCF+G +++LL++++AP+
Sbjct: 129 GVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSA--CNALLLRVRYAPR 186
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+++K++GP +AS+F+TDRYHICKE +DFLWVRTTDFS +K
Sbjct: 187 IYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIK 226
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 149 bits (377), Expect = 3e-34
Identities = 70/160 (43%), Positives = 107/160 (66%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS + L+FK L ++ + ++II RP+ A +R+ M DC+ VLE W+
Sbjct: 72 LSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAG---FMSSDDCLRVLERWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPER++L F+V + E YKL+ F D+ E+ CCF+G +++LL++++AP+
Sbjct: 129 GVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSA--CNALLLRVRYAPR 186
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++K++GP +AS+F+TDRYHICKE +DFLWVRTTDFS +K
Sbjct: 187 TYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIK 226
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 149 bits (375), Expect = 5e-34
Identities = 72/160 (45%), Positives = 106/160 (66%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS L+FK L ++ + ++II RP+ A +R+ MV+ D + VLE W+
Sbjct: 77 LSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGGVLHVG---FMVQDDYLRVLERWE 133
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
W MPER++L F++ + E YKLEV F D+LE+ CCFNG +++LL++K+AP+
Sbjct: 134 DVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSS--CNALLLRVKYAPR 191
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+++K++GP IAS+ DRYHICKE++DFLWVRTTDFS K
Sbjct: 192 IYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTK 231
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 143 bits (360), Expect = 3e-32
Identities = 71/160 (44%), Positives = 106/160 (66%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS L+F L + ++I++RPV A R M++ + M VLESW+
Sbjct: 70 LSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVG---FMLKEERMSVLESWE 126
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPER+++ F++ HE+E YKLEV F +ILE+ C E+K++++LLKLK+AP+
Sbjct: 127 GVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLNALLLKLKYAPR 184
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++KKI+G +ASRF++ RY +C EDYD+LWVRTT+FS M+
Sbjct: 185 IYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMR 224
>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
gi|482555639|gb|EOA19831.1| hypothetical protein
CARUB_v10000076mg, partial [Capsella rubella]
Length = 1165
Score = 142 bits (359), Expect = 4e-32
Identities = 67/160 (41%), Positives = 100/160 (62%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+FK L ++ + ++II RPVD R R+ C LE W+
Sbjct: 104 LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDVVLTVGFPESSEERFC--ALEKWE 161
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W + E++++ F+V + Y++EV+F DI+E+ CC NGD ++++ LLKLK+ PK
Sbjct: 162 GVRCWILEEKRRVEFWVWESGDCYRIEVRFEDIVETLGCCVNGDAFEINAFLLKLKYGPK 221
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
VFK++ GP IA++F +RY CKED+DF+W+RTTDFS K
Sbjct: 222 VFKRVTGPHIATKFKPNRYCFCKEDFDFMWIRTTDFSGSK 261
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 142 bits (359), Expect = 4e-32
Identities = 69/160 (43%), Positives = 100/160 (62%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+FK L ++ + ++II RPVD R R+ + C LE WD
Sbjct: 73 LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFC--ALEKWD 130
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W + E++++ F+V + YK+EV+F DI+E+ CC NGD ++D+ LLKLK+ PK
Sbjct: 131 GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
VFK++ IA++F +DRY CKED+DF+W+RTTDFS K
Sbjct: 191 VFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSK 229
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 138 bits (348), Expect = 7e-31
Identities = 67/160 (41%), Positives = 101/160 (63%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+FK L I+ + ++II RPVD R + C LE W+
Sbjct: 71 LSSQSKLLFKSRNLRISEAYDDIIPRPVDPRKMLDGVVLTVGFPEADEGRFC--ALEKWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W + E++++ F+V E YKLEV+F DI+E+ CCFNG ++++ L+LK+ PK
Sbjct: 129 GVRCWVIEEKRRVEFWVCDGGECYKLEVRFEDIVETVGCCFNG-ASEINAFFLRLKYGPK 187
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++KK++GP IA++F +DRY CKED+DF+W+R+TDFS +K
Sbjct: 188 IYKKVSGPHIATKFKSDRYRFCKEDFDFMWIRSTDFSGLK 227
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 137 bits (345), Expect = 2e-30
Identities = 65/160 (40%), Positives = 104/160 (65%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
L+ N+KL+ +L + S ++II RP R R+ + DCM VL+SW+
Sbjct: 72 LAENKKLLLSSHFLCLDASSDDIIPRPALPRNRINNGALYAGFP---IGPDCMSVLQSWE 128
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G W MPER++L F+V H + +KLE+ F +ILE C + + K +++LLKL++ P+
Sbjct: 129 GVRGWVMPERQRLDFWVTHGDQCFKLEIPFENILECDGYC-SDEGSKPNALLLKLRYGPR 187
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
+++K+AGP +A++F DRY CKE+++F+WVRTTDFS++K
Sbjct: 188 IYQKMAGPNVAAKFKDDRYRFCKENFEFMWVRTTDFSTLK 227
>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
gi|561028757|gb|ESW27397.1| hypothetical protein
PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 136 bits (342), Expect = 3e-30
Identities = 70/160 (43%), Positives = 102/160 (63%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS ++L+ +L ++ + E+II RP+ G+M+ D M VLESW+
Sbjct: 73 LSQLQQLLIHSHFLRLSDTSEDIIFRPLHRLQN------GVLYAGLMLSDDRMSVLESWE 126
Query: 302 GATLWFMPERKKLHFFVKHERESYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAPK 123
G +P+R+KL F V H+ + Y++E+ F DILES C G E K++++LLKLK PK
Sbjct: 127 GVAGLVVPQRRKLDFLVLHDGDCYRVEIFFEDILESHGYCL-GAEGKLNALLLKLKFGPK 185
Query: 122 VFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++KK GP +A++F DRYH CKED +FLWVRTTDFS++K
Sbjct: 186 IYKKKMGPDVATKFRNDRYHFCKEDSEFLWVRTTDFSALK 225
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 131 bits (330), Expect = 9e-29
Identities = 69/161 (42%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Frame = -3
Query: 482 LSHNRKLIFKGFYLSIAHSLEEIIIRPVDARYRVXXXXXXXXXXGIMVRGDCMGVLESWD 303
LS KL+ K L ++ + ++II RPV + R+ M + + VLE W+
Sbjct: 71 LSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVG---FMKKETTLCVLEYWE 127
Query: 302 GATLWFMPERKKLHFFVKHERE-SYKLEVQFGDILESRRCCFNGDEKKVDSILLKLKHAP 126
G WFMPER+++ F+++ +E YKL V+F DILE+ +GD KV++++LKL++ P
Sbjct: 128 GVRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGD--KVNAVVLKLRYGP 185
Query: 125 KVFKKIAGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMK 3
++++KI+GP IAS+F+T+RY CKED+DFLWVRTTD S++K
Sbjct: 186 RIYQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIK 226