BLASTX nr result
ID: Mentha22_contig00048230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00048230
(922 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion)... 94 8e-17
gb|EPS74139.1| hypothetical protein M569_00616, partial [Genlise... 85 4e-14
ref|YP_005090412.1| orf2 gene product (mitochondrion) [Boea hygr... 70 9e-10
ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera... 64 6e-08
dbj|BAD66791.1| orf598 [Beta vulgaris subsp. vulgaris] 59 2e-06
gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota] 58 6e-06
ref|NP_862328.1| hypothetical protein BrnaMpl_p6 [Brassica napus... 58 6e-06
ref|NP_064083.1| orf352 gene product (mitochondrion) [Beta vulga... 57 8e-06
emb|CBJ20748.1| hypothetical protein [Beta vulgaris subsp. marit... 57 8e-06
>ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion) [Phoenix dactylifera]
gi|343478415|gb|AEM43903.1| DNA-dependent RNA polymerase
(mitochondrion) [Phoenix dactylifera]
Length = 875
Score = 94.0 bits (232), Expect = 8e-17
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Frame = -1
Query: 808 FQFIAKVLCKDSVNG---APITQDAAASAYQIMSDLLLNEEMARRTNLIPHPDGKIQDVY 638
FQF+AK+L KD V+ P+TQDA+ASAYQIMS LLLN+EM RRTNL+P DG+IQDVY
Sbjct: 461 FQFLAKILSKDIVSNYHKVPVTQDASASAYQIMSYLLLNQEMGRRTNLLPSSDGQIQDVY 520
Query: 637 MCLLYFIKEFLHP*INDAMSCALLSLVSQ 551
MCL +K+FL ++ +LS++++
Sbjct: 521 MCLQEELKKFLVTRLDANKYAVILSMLTR 549
>gb|EPS74139.1| hypothetical protein M569_00616, partial [Genlisea aurea]
Length = 343
Score = 85.1 bits (209), Expect = 4e-14
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = -1
Query: 808 FQFIAKVLCKDSVNGA-PITQDAAASAYQIMSDLLLNEEMARRTNLIPHPDGKIQDVYMC 632
FQFIAKV+CKD+++ PI+QDA+ASAYQIMS LLNEEMARRTNLI + DGKIQD+Y
Sbjct: 143 FQFIAKVICKDNLDFYHPISQDASASAYQIMSYFLLNEEMARRTNLIQNSDGKIQDIYTN 202
Query: 631 LL 626
+L
Sbjct: 203 IL 204
>ref|YP_005090412.1| orf2 gene product (mitochondrion) [Boea hygrometrica]
gi|340549502|gb|AEK53323.1| hypothetical protein
(mitochondrion) [Boea hygrometrica]
Length = 585
Score = 70.5 bits (171), Expect = 9e-10
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 14/88 (15%)
Frame = -1
Query: 808 FQFIAKVLCKDSVNG-------------APITQDAAASAYQIMSDLLLNEEMARRTNLIP 668
FQF+A +L + P+TQDA+ASAYQIMS LL+E MA RTNLIP
Sbjct: 195 FQFLANMLILKDIKSISEIQNYNLFILNTPLTQDASASAYQIMSYFLLDESMAMRTNLIP 254
Query: 667 HP-DGKIQDVYMCLLYFIKEFLHP*IND 587
HP +IQDVY +L +KEF++ + D
Sbjct: 255 HPCHNEIQDVYSYMLEELKEFINSELQD 282
>ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera]
gi|209954148|emb|CAQ77581.1| DNA-dependent RNA
polymerase. This is a family of single chain RNA
polymerases; pfam00940 [Vitis vinifera]
gi|239764752|gb|ACS15222.1| DNA-dependent RNA polymerase
[Vitis vinifera]
Length = 975
Score = 64.3 bits (155), Expect = 6e-08
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 22/88 (25%)
Frame = -1
Query: 808 FQFIAKVLCKDSVNGA-----PITQDAAASAYQIMSDLLLNEEMARRTNLIPHPD----- 659
+QFI+KVLC +S N + PITQDA+ASAYQIMS LL+ ++A +TNLIP+ D
Sbjct: 585 YQFISKVLCIESNNKSNLIQIPITQDASASAYQIMSYFLLDNDLALKTNLIPYIDYHYSP 644
Query: 658 -------GKIQDVYMCLL-----YFIKE 611
KI+D+Y LL YF KE
Sbjct: 645 EYDFSDNKKIKDIYTILLEELKVYFRKE 672
>dbj|BAD66791.1| orf598 [Beta vulgaris subsp. vulgaris]
Length = 598
Score = 59.3 bits (142), Expect = 2e-06
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = -1
Query: 778 DSVNGAPITQDAAASAYQIMSDLLLNEEMARRTNLIP-HPDGKIQDVYMCLLYFIKEFL 605
D + +PITQDA+ASAYQI+S LL++ +A+RTNLIP D +IQDVY + +K F+
Sbjct: 300 DQILSSPITQDASASAYQILSYFLLDDTLAKRTNLIPMDGDDRIQDVYNHIEIELKSFI 358
>gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota]
Length = 999
Score = 57.8 bits (138), Expect = 6e-06
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = -1
Query: 775 SVNGAPITQDAAASAYQIMSDLLLNEEMARRTNLIPHP-DGKIQDVYMCLLYFIKEFLH 602
++ PITQDA+ASAYQ+MS LL++++A+ TNLI P D IQD+Y LL ++ +++
Sbjct: 622 AITSYPITQDASASAYQLMSYFLLDKDLAKNTNLIQRPGDSNIQDIYSYLLKEVQVYIN 680
>ref|NP_862328.1| hypothetical protein BrnaMpl_p6 [Brassica napus]
gi|23200585|dbj|BAC16369.1| orf6 [Brassica napus]
Length = 1078
Score = 57.8 bits (138), Expect = 6e-06
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -1
Query: 772 VNGAPITQDAAASAYQIMSDLLLNEEMARRTNLIPHPDGKIQDVYMCLLYFIKEFL 605
+N P++QDA+ASAYQIMS LLLNE++ + TN+I + KIQD+Y L + E+L
Sbjct: 616 LNEIPVSQDASASAYQIMSFLLLNEDLGKGTNMIYGSEDKIQDLYSSLKDELVEYL 671
>ref|NP_064083.1| orf352 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435105|ref|YP_004222323.1| hypothetical protein
BevumaM_p088 [Beta vulgaris subsp. maritima]
gi|346683197|ref|YP_004842129.1| hypothetical protein
BemaM_p084 [Beta macrocarpa] gi|9087332|dbj|BAA99476.1|
orf352 [Beta vulgaris subsp. vulgaris]
gi|317905659|emb|CBJ14055.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439838|emb|CBJ17546.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500115|emb|CBX24933.1| hypothetical protein [Beta
macrocarpa] gi|384939139|emb|CBL51986.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 352
Score = 57.4 bits (137), Expect = 8e-06
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -1
Query: 778 DSVNGAPITQDAAASAYQIMSDLLLNEEMARRTNLIP-HPDGKIQDVY 638
D + +PITQDA+ASAYQI+S LL++ +A+RTNLIP D +IQDVY
Sbjct: 300 DQILSSPITQDASASAYQILSYFLLDDTLAKRTNLIPMDGDDRIQDVY 347
>emb|CBJ20748.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 352
Score = 57.4 bits (137), Expect = 8e-06
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -1
Query: 778 DSVNGAPITQDAAASAYQIMSDLLLNEEMARRTNLIP-HPDGKIQDVY 638
D + +PITQDA+ASAYQI+S LL++ +A+RTNLIP D +IQDVY
Sbjct: 300 DQILSSPITQDASASAYQILSYFLLDDTLAKRTNLIPMDGDDRIQDVY 347