BLASTX nr result

ID: Mentha22_contig00047388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00047388
         (337 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM66271.1| ARF8 [Solanum melongena]                                62   1e-07
ref|XP_006357893.1| PREDICTED: auxin response factor 6-like isof...    60   4e-07
ref|XP_006357892.1| PREDICTED: auxin response factor 6-like isof...    60   4e-07
gb|ADH04265.1| ARF1 [Nicotiana benthamiana]                            59   5e-07
ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersi...    58   2e-06

>gb|ACM66271.1| ARF8 [Solanum melongena]
          Length = 891

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = -3

Query: 335 FQQNIPNVSASLLQNQMTQQSHSQPSFLQNLTENNTVSQAQILHQQLQGR 186
           FQQ+IPN SASL Q+QM Q SHS  + +Q  +EN+ +SQAQ+L QQLQ R
Sbjct: 462 FQQSIPNSSASLSQSQMLQPSHSHQNLIQGFSENHLISQAQMLQQQLQRR 511


>ref|XP_006357893.1| PREDICTED: auxin response factor 6-like isoform X2 [Solanum
           tuberosum]
          Length = 892

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -3

Query: 335 FQQNIPNVSASLLQNQMTQQSHSQPSFLQNLTENNTVSQAQILHQQLQGR 186
           FQ +IPN SA L Q+QM Q SHSQ + +Q  +EN+ +SQAQ+L QQLQ R
Sbjct: 461 FQHSIPNSSAPLSQSQMLQPSHSQQNLIQGFSENHLISQAQMLQQQLQRR 510


>ref|XP_006357892.1| PREDICTED: auxin response factor 6-like isoform X1 [Solanum
           tuberosum]
          Length = 893

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -3

Query: 335 FQQNIPNVSASLLQNQMTQQSHSQPSFLQNLTENNTVSQAQILHQQLQGR 186
           FQ +IPN SA L Q+QM Q SHSQ + +Q  +EN+ +SQAQ+L QQLQ R
Sbjct: 462 FQHSIPNSSAPLSQSQMLQPSHSQQNLIQGFSENHLISQAQMLQQQLQRR 511


>gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
          Length = 889

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 44/121 (36%), Positives = 57/121 (47%), Gaps = 27/121 (22%)
 Frame = -3

Query: 335 FQQNIPNVSASLLQNQMTQQSHSQPSFLQNLTENNTVSQAQILHQQLQGRXXXXXXXXXX 156
           FQQ+IP VSASL  +Q+ Q SHSQ + L   +EN  +SQAQ+L QQLQ R          
Sbjct: 458 FQQSIPGVSASLSHSQILQPSHSQQNLLHGFSENQLISQAQMLQQQLQRRQNYNDQQQLL 517

Query: 155 XXXXXXIP----------------TSL-QMGSASE----------STSQLQNFSDLIGNH 57
                                   +SL QM SA++          ST   Q FSD++GNH
Sbjct: 518 QPQLQQHQEVNSSQFQHQQQTKAMSSLSQMTSAAQPQLSHLQVLSSTGSPQTFSDILGNH 577

Query: 56  M 54
           +
Sbjct: 578 V 578


>ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
           gi|300252249|gb|ADJ96372.1| auxin response factor 6-1
           [Solanum lycopersicum]
          Length = 524

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = -3

Query: 335 FQQNIPNVSASLLQNQMTQQSHSQPSFLQNLTENNTVSQAQILHQQLQGR 186
           FQ +IPN SA L Q QM Q SHSQ + +Q  +EN+ +SQAQ+L QQLQ R
Sbjct: 461 FQHSIPNSSAPLSQIQMLQPSHSQHNLIQGFSENHLISQAQMLQQQLQRR 510


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