BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00044468
         (569 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   243   3e-62
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   221   8e-56
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   219   5e-55
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   215   8e-54
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   215   8e-54
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   215   8e-54
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   214   1e-53
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   214   1e-53
gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]           214   2e-53
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   213   4e-53
gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]       211   8e-53
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   211   8e-53
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl...   207   1e-51
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   207   1e-51
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   207   2e-51
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   207   2e-51
ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A...   204   2e-50
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   203   3e-50
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   203   3e-50
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...   202   4e-50

>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  243 bits (619), Expect = 3e-62
 Identities = 121/157 (77%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
 Frame = -1

Query: 470 NVVKRNLSSRATAPADFSTNISVPTCNN-SYPPYERLLPCPSQNGPPRVEHLVVIEGCTV 294
           N   RN S  +TA A  ST+ S+ T NN SYPPY RLLPCPSQNGPPRVEH VV EG  V
Sbjct: 56  NAAHRNRSCESTASAYVSTDSSISTSNNNSYPPYGRLLPCPSQNGPPRVEHFVVTEGGPV 115

Query: 293 LDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSI 114
           LDYI K+LN+P  FVADLIHFGAVFYALVCP PP TATPEQI  FK++TDPSLLRKRSSI
Sbjct: 116 LDYISKSLNIPSPFVADLIHFGAVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSI 175

Query: 113 KGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           KGKT REAQKTFRI+RTDEF+E GTYLRVHVHPKRFP
Sbjct: 176 KGKTFREAQKTFRISRTDEFVETGTYLRVHVHPKRFP 212


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  221 bits (564), Expect = 8e-56
 Identities = 109/145 (75%), Positives = 121/145 (83%)
 Frame = -1

Query: 437 TAPADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPP 258
           TA +D +   SV    N YP Y RLLPCPSQNGPPRVEHLVV EG  VLDYI KAL+LPP
Sbjct: 63  TASSDSANTSSV----NGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPP 118

Query: 257 LFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTF 78
           LFVADLIHFGAV+YALVCP PP +ATPEQ++ FK+ T PS+LRKR SIKGKT+REAQKTF
Sbjct: 119 LFVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTF 178

Query: 77  RITRTDEFLEAGTYLRVHVHPKRFP 3
           RIT  +EF+EAGTYLRVHVHPKRFP
Sbjct: 179 RITDVNEFVEAGTYLRVHVHPKRFP 203


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  219 bits (557), Expect = 5e-55
 Identities = 109/159 (68%), Positives = 129/159 (81%), Gaps = 6/159 (3%)
 Frame = -1

Query: 461 KRNLSSRATA-PADFS-TNISVPTCNNS----YPPYERLLPCPSQNGPPRVEHLVVIEGC 300
           +R+L S+++A P   S T+++V T  NS    YP Y RLLPCPS + PPRVEH+VV+E  
Sbjct: 44  RRSLGSKSSAFPCKSSITDVTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAG 103

Query: 299 TVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRS 120
            V++YI K+LNLPPL+VADLIHFGAV+YALVCP PP TATPEQI+ FKKFT+PS L+ R 
Sbjct: 104 PVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRK 163

Query: 119 SIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           SIKGKTVREAQKTFRIT  DEF+E GTYLRVHVHPKRFP
Sbjct: 164 SIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFP 202


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  215 bits (547), Expect = 8e-54
 Identities = 102/127 (80%), Positives = 111/127 (87%)
 Frame = -1

Query: 383 YPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVC 204
           YP Y RLLPCPSQN PPRVEHLVV EG  VL+YI + LNLPPLFVADLIHFGAV+YALVC
Sbjct: 83  YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142

Query: 203 PSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVH 24
           P PP TATPEQ++ FK+ TDPS+L KRSSIKGKTVREAQKTFRIT  D+ +EAGTYLRVH
Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202

Query: 23  VHPKRFP 3
           VHPKRFP
Sbjct: 203 VHPKRFP 209


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551677|gb|ESR62306.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  215 bits (547), Expect = 8e-54
 Identities = 102/127 (80%), Positives = 111/127 (87%)
 Frame = -1

Query: 383 YPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVC 204
           YP Y RLLPCPSQN PPRVEHLVV EG  VL+YI + LNLPPLFVADLIHFGAV+YALVC
Sbjct: 83  YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142

Query: 203 PSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVH 24
           P PP TATPEQ++ FK+ TDPS+L KRSSIKGKTVREAQKTFRIT  D+ +EAGTYLRVH
Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202

Query: 23  VHPKRFP 3
           VHPKRFP
Sbjct: 203 VHPKRFP 209


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  215 bits (547), Expect = 8e-54
 Identities = 111/166 (66%), Positives = 126/166 (75%), Gaps = 1/166 (0%)
 Frame = -1

Query: 497 KQKTAYDSFNVVKRNLSSRATAP-ADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRVEH 321
           K   A  S N  +R     ++ P   ++TN S   C N    Y+RLLPCPS N PPR+EH
Sbjct: 41  KNALARFSLNSHERKFCCESSKPEVAYTTNTS---CVNGNSDYDRLLPCPSYNRPPRIEH 97

Query: 320 LVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDP 141
           LVV+E   VLDYI KAL+LPPLFVADLI FGAV YALVCP PP TATPEQI+ F+KFT P
Sbjct: 98  LVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAP 157

Query: 140 SLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           S+L+KRSSIKGKTVREAQKTFRIT  D++LEAGTYLRVHVHPKRFP
Sbjct: 158 SVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHPKRFP 203


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508781387|gb|EOY28643.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 491

 Score =  214 bits (546), Expect = 1e-53
 Identities = 101/128 (78%), Positives = 113/128 (88%)
 Frame = -1

Query: 386 SYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALV 207
           SYP Y RLLPCPS NGPPRVEHLVV EG  VL+YI KAL+LPP+FVADLIHFGAV+YALV
Sbjct: 92  SYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALV 151

Query: 206 CPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRV 27
           CP PP +ATPEQI+ FK+ T PS+L KR+SI+GKTVREAQKTFRIT  D+F+EAGTYLRV
Sbjct: 152 CPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRV 211

Query: 26  HVHPKRFP 3
           HVHPKRFP
Sbjct: 212 HVHPKRFP 219


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
           gi|462409392|gb|EMJ14726.1| hypothetical protein
           PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  214 bits (545), Expect = 1e-53
 Identities = 101/129 (78%), Positives = 111/129 (86%)
 Frame = -1

Query: 389 NSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYAL 210
           N YP Y RLLPCPS NGPPRVEHLVV EG  VL+YI K L+LPP FVADLIHFGAV+YAL
Sbjct: 78  NGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVYYAL 137

Query: 209 VCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLR 30
           VCP PP TATPEQ++ FK+ T PS+L+ R+SIKGKTVREAQKTFRIT  DEF+EAGTYLR
Sbjct: 138 VCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTYLR 197

Query: 29  VHVHPKRFP 3
           VHVHPKRFP
Sbjct: 198 VHVHPKRFP 206


>gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]
          Length = 446

 Score =  214 bits (544), Expect = 2e-53
 Identities = 104/129 (80%), Positives = 112/129 (86%)
 Frame = -1

Query: 389 NSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYAL 210
           N YP Y+RLLPCPS N PPRVEHLVV E   VLDYI KAL+LPPLFVADLIHFGAV YAL
Sbjct: 78  NCYPKYDRLLPCPSHNLPPRVEHLVVTEEGRVLDYICKALDLPPLFVADLIHFGAVHYAL 137

Query: 209 VCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLR 30
           VCP PP TATPEQIK FK+ T PS+LRKR+SIKGKTVREAQKTFRIT  ++F+EAGTYLR
Sbjct: 138 VCPKPPPTATPEQIKVFKEVTAPSVLRKRASIKGKTVREAQKTFRITDREQFVEAGTYLR 197

Query: 29  VHVHPKRFP 3
           VHVHPKRFP
Sbjct: 198 VHVHPKRFP 206


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score =  213 bits (541), Expect = 4e-53
 Identities = 106/154 (68%), Positives = 119/154 (77%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455 NLSSRATAPADFSTNISVPTCN---NSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDY 285
           +LS R  +      +I+  T     N YP Y RLLPCPS N PPR+EHLVV E   VLDY
Sbjct: 44  SLSKRKLSCESLKQDIACTTATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDY 103

Query: 284 IVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGK 105
           I KAL+LPPLFVADLIHFGAV YALVCP PP TATPEQI+ F++ T PS+L+KR+SIKGK
Sbjct: 104 ICKALDLPPLFVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGK 163

Query: 104 TVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           TVREAQKTFRIT  D+FLEAG YLRVHVHPKRFP
Sbjct: 164 TVREAQKTFRITHVDQFLEAGMYLRVHVHPKRFP 197


>gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]
          Length = 461

 Score =  211 bits (538), Expect = 8e-53
 Identities = 106/153 (69%), Positives = 121/153 (79%)
 Frame = -1

Query: 461 KRNLSSRATAPADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLDYI 282
           KR L  R+TA +     I   T +NSYPPY RLLPCP +N  PRVEHLVV EG  VL+YI
Sbjct: 37  KRCLCCRSTASSAIVNKICSST-SNSYPPYGRLLPCPIENTLPRVEHLVVSEGGPVLEYI 95

Query: 281 VKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKGKT 102
             AL +PPLFVADLIHFGAVFYALVCP PP+TA PE+++ ++K+TD S+L KR SIKGKT
Sbjct: 96  SNALEIPPLFVADLIHFGAVFYALVCPDPPSTAAPEEMEIYRKYTDRSVLSKRPSIKGKT 155

Query: 101 VREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
            REAQKTFRITRTDE +E GTYLRVHVHPKRFP
Sbjct: 156 RREAQKTFRITRTDELVETGTYLRVHVHPKRFP 188


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
           chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  211 bits (538), Expect = 8e-53
 Identities = 106/157 (67%), Positives = 125/157 (79%), Gaps = 6/157 (3%)
 Frame = -1

Query: 455 NLSSRATA-PADFS-TNISVPTCNNS----YPPYERLLPCPSQNGPPRVEHLVVIEGCTV 294
           +L S+++A P   S T+++V T  NS    YP Y RLLPCPS + PPRVEH+VV+E   V
Sbjct: 46  SLGSKSSAFPCKSSITDVTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPV 105

Query: 293 LDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSI 114
           ++YI K+LNLPPL+VADLIHFGAV+YALVCP PP TATPEQI+ FK  T+PS L+ R SI
Sbjct: 106 MEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKNXTEPSFLKGRKSI 165

Query: 113 KGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           KGKTVREAQKTFRIT  DEF+E GTYLRVHVHPKRFP
Sbjct: 166 KGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFP 202


>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score =  207 bits (528), Expect = 1e-51
 Identities = 98/155 (63%), Positives = 123/155 (79%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 NLSSRATAPADFST----NISVPTCNNSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLD 288
           N ++     A+FST    N++  + ++S+P Y+RLLPCPS   PPR+EHLV+ EG  VL+
Sbjct: 54  NSNTALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLE 113

Query: 287 YIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKG 108
            I KAL+LPPL+V+DLI FGAV+YALVCP PP  AT EQI+ FK+ T+PS+LRKR+SIKG
Sbjct: 114 LICKALDLPPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKG 173

Query: 107 KTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           KTVREAQKTFR+T  D+F+E GTYLRVHVHPKRFP
Sbjct: 174 KTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFP 208


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  207 bits (528), Expect = 1e-51
 Identities = 98/155 (63%), Positives = 123/155 (79%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 NLSSRATAPADFST----NISVPTCNNSYPPYERLLPCPSQNGPPRVEHLVVIEGCTVLD 288
           N ++     A+FST    N++  + ++S+P Y+RLLPCPS   PPR+EHLV+ EG  VL+
Sbjct: 54  NSNTALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLE 113

Query: 287 YIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSSIKG 108
            I KAL+LPPL+V+DLI FGAV+YALVCP PP  AT EQI+ FK+ T+PS+LRKR+SIKG
Sbjct: 114 LICKALDLPPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKG 173

Query: 107 KTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           KTVREAQKTFR+T  D+F+E GTYLRVHVHPKRFP
Sbjct: 174 KTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFP 208


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  207 bits (527), Expect = 2e-51
 Identities = 105/168 (62%), Positives = 129/168 (76%), Gaps = 2/168 (1%)
 Frame = -1

Query: 500 LKQKTAYD--SFNVVKRNLSSRATAPADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRV 327
           LK K  Y   + +   R+ S ++TA +D S+  S    +N +  Y RL+PCP QN PPRV
Sbjct: 48  LKNKNHYKRLALSSCSRSFSCQSTALSDISST-SHTVSSNGHLRYGRLMPCPLQNSPPRV 106

Query: 326 EHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFT 147
           EHLVV +   VL+YI KAL+LPPL+V DLI FGAV+YALVCP PP TA+PEQIK +++ T
Sbjct: 107 EHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVT 166

Query: 146 DPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           DPS+LR+R+SIKGKTVREAQKTF+ITR DE +EAGTYLRVHVHPKRFP
Sbjct: 167 DPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFP 214


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 477

 Score =  207 bits (526), Expect = 2e-51
 Identities = 105/165 (63%), Positives = 124/165 (75%), Gaps = 2/165 (1%)
 Frame = -1

Query: 491 KTAYDSFNVVKRNLSSRATAPADFSTNISVPTCNNSYP--PYERLLPCPSQNGPPRVEHL 318
           K A+ S  + K+N   +  A       ++ PT  +S    PY RLLPCPSQNGPPRVEHL
Sbjct: 45  KVAWFSKKLKKKN---KRVACESLKEEVTYPTAASSVYGYPYTRLLPCPSQNGPPRVEHL 101

Query: 317 VVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPS 138
           VV EG  VL+YI K L+LP  FVADLIHFGAV+YALVCP PP TATPEQ++ +K+ T PS
Sbjct: 102 VVSEGGPVLEYICKKLDLPAQFVADLIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPS 161

Query: 137 LLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           +L+KR SIKGKTVREAQKTFRIT  D+++E GTYLRVHVHPKRFP
Sbjct: 162 VLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLRVHVHPKRFP 206


>ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda]
           gi|548862161|gb|ERN19525.1| hypothetical protein
           AMTR_s00062p00043970 [Amborella trichopoda]
          Length = 477

 Score =  204 bits (518), Expect = 2e-50
 Identities = 102/158 (64%), Positives = 124/158 (78%)
 Frame = -1

Query: 476 SFNVVKRNLSSRATAPADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRVEHLVVIEGCT 297
           S++  KR + S +   A+ + + S    +N YP Y  LLPCPS+NGPPR+EHL+V EG  
Sbjct: 52  SWSFTKRLVGSTSITQANTTISTSP---SNVYPGYTSLLPCPSKNGPPRIEHLIVSEGGP 108

Query: 296 VLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTDPSLLRKRSS 117
           VLDYI KAL+LP LFVADLIHFGAV+YALV P PP +ATPEQ+K FK+ T  S+LRKR+S
Sbjct: 109 VLDYICKALDLPTLFVADLIHFGAVYYALVSPEPPPSATPEQVKLFKEATARSVLRKRAS 168

Query: 116 IKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           +KGKTVREAQKTFRIT  +EF+E GTYLRV+VHPKRFP
Sbjct: 169 LKGKTVREAQKTFRITHANEFVEEGTYLRVYVHPKRFP 206


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
           lycopersicum]
          Length = 448

 Score =  203 bits (516), Expect = 3e-50
 Identities = 102/168 (60%), Positives = 128/168 (76%), Gaps = 2/168 (1%)
 Frame = -1

Query: 500 LKQKTAYD--SFNVVKRNLSSRATAPADFSTNISVPTCNNSYPPYERLLPCPSQNGPPRV 327
           LK K  Y   + +   ++   ++TA +D ++  S    +N +  Y RL+PCP QN PPRV
Sbjct: 13  LKNKNHYKRLALSSCSKSFCCQSTALSDINST-SHTVSSNGHLRYGRLMPCPLQNSPPRV 71

Query: 326 EHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFT 147
           EHLVV +   V++YI KAL+LPPL+V DLI FGAV+YALVCP PP TA+PEQIK +++ T
Sbjct: 72  EHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVT 131

Query: 146 DPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           DPS+LRKR+SIKGKTVREAQKTF+ITR DE +EAGTYLRVHVHPKRFP
Sbjct: 132 DPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFP 179


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 395

 Score =  203 bits (516), Expect = 3e-50
 Identities = 96/124 (77%), Positives = 110/124 (88%)
 Frame = -1

Query: 374 YERLLPCPSQNGPPRVEHLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSP 195
           Y+RLLPCPSQN PPRVEHLVV+E   VLDYI KAL+LPPLFVADLIHFGAV YALVCP P
Sbjct: 3   YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 194 PATATPEQIKAFKKFTDPSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHP 15
           P TATPEQI+ F++FT PS+L+KR+SIKGKTVREAQKTFR++   +FLE GTYLRV+VHP
Sbjct: 63  PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 14  KRFP 3
           +RFP
Sbjct: 123 RRFP 126


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
           gi|561020966|gb|ESW19737.1| hypothetical protein
           PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  202 bits (515), Expect = 4e-50
 Identities = 99/167 (59%), Positives = 126/167 (75%), Gaps = 4/167 (2%)
 Frame = -1

Query: 491 KTAYDSFNVVKRNLSSRATAPADFST----NISVPTCNNSYPPYERLLPCPSQNGPPRVE 324
           +++Y+S+  +         A ++FS     N++  + +NS P Y+RLLPCP    PPRVE
Sbjct: 50  RSSYNSYTAI--------AAESEFSKTDAENLTATSSSNSLPKYDRLLPCPLHKTPPRVE 101

Query: 323 HLVVIEGCTVLDYIVKALNLPPLFVADLIHFGAVFYALVCPSPPATATPEQIKAFKKFTD 144
           HLVV EG  VL++I KAL LPPL+V DLI FGAV+YALVCP PP +AT EQI+ FK+ T+
Sbjct: 102 HLVVSEGGPVLEHICKALELPPLYVTDLIQFGAVYYALVCPQPPPSATEEQIRVFKEVTE 161

Query: 143 PSLLRKRSSIKGKTVREAQKTFRITRTDEFLEAGTYLRVHVHPKRFP 3
           PS+LR+R+SIKGKTVREAQKTFR+T  D+F+E GTYLRVHVHPKRFP
Sbjct: 162 PSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTYLRVHVHPKRFP 208