BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00044340
         (501 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   1e-11
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   2e-11
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   2e-11
gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   2e-11
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]          48   2e-11
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]            48   2e-11
gb|AAX96594.1| retrotransposon protein, putative, Ty3-gypsy sub-...    48   2e-11
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]          48   2e-11
gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Ja...    48   2e-11
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   3e-11
gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subc...    47   4e-11
gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   6e-11
gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   8e-11
emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]          48   8e-11
gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subc...    47   8e-11
gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap...    46   1e-10
gb|ABC94893.1| polyprotein [Oryza australiensis]                       46   1e-10
gb|ABA95392.1| retrotransposon protein, putative, Ty3-gypsy subc...    47   1e-10
gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japoni...    47   2e-10
emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]          48   2e-10

>gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 47.8 bits (112), Expect(2) = 1e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 826  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 885

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 886  RWLELIKDYDLEVH 899



 Score = 47.0 bits (110), Expect(2) = 1e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 902  PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----RGQINTLDIQPLL 956

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 957  RTQIEEAQKDNEEIRE 972


>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1712

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 1205 SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 1264

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 1265 RWLELIKDYDLEVH 1278



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 1281 PGKANVVADALSRKSHYNHLRMEGMVPELREEIAQLNLHIVP-----HGRINTLDIQPLL 1335

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 1336 RTQIEEAQKDNEEVRE 1351


>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1710

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 1227 SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 1286

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 1287 RWLELIKDYDLEVH 1300



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 1303 PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----RGQINTLDIQPLL 1357

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 1358 RTQIEEAQKDNEEVRE 1373


>gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 864  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 923

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 924  RWLELIKDYDLEVH 937



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 940  PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----HGQINTLDIQPLL 994

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 995  RTQIEEAQKDNEEVRE 1010


>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
          Length = 1470

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 864  SRQLRPHEENYPTHDLELVAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 923

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 924  RWLELIKDYDLEVH 937



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 940  PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----RGQINTLDIQPLL 994

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 995  RTQIEEAQKDNEEVRE 1010


>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
          Length = 1470

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 864  SRQLRPHEENYPTHDLELVAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 923

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 924  RWLELIKDYDLEVH 937



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 940  PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----RGQINTLDIQPLL 994

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 995  RTQIEEAQKDNEEVRE 1010


>gb|AAX96594.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|62734535|gb|AAX96644.1|
           retrotransposon protein, putative, Ty3-gypsy sub-class
           [Oryza sativa Japonica Group] gi|77550407|gb|ABA93204.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1158

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436 SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
           S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 632 SRQLRPHEENYPTHDLELVAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 691

Query: 271 KWLELVKDYEINCH 230
           +WLEL+KDY++  H
Sbjct: 692 RWLELIKDYDLEIH 705



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = -2

Query: 230 PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
           P  ANVVA+ALS ++H            L  E +++NL +VP      G I TL ++P L
Sbjct: 708 PGKANVVADALSRKSHCNHLRTEGMAPELKEEMAQLNLHIVP-----HGQINTLDIQPLL 762

Query: 50  RSRIVDAQRKDESLKE 3
           R++I +AQ+ +E ++E
Sbjct: 763 RTQIEEAQKDNEEIRE 778


>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
          Length = 1470

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 864  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 923

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 924  RWLELIKDYDLEVH 937



 Score = 46.2 bits (108), Expect(2) = 2e-11
 Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -2

Query: 230  PKIANVVANALS---HRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVE 60
            P  ANVVA+ALS   H NHL++  ++     L  E +++NL +VP      G I TL ++
Sbjct: 940  PGKANVVADALSRKIHCNHLRMEGMV---PELREEIAQLNLHIVP-----RGQINTLDIQ 991

Query: 59   PDLRSRIVDAQRKDESLKE 3
            P LR++I +AQ+ +E ++E
Sbjct: 992  PLLRTQIEEAQKDNEEVRE 1010


>gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Japonica Group]
           gi|21672044|gb|AAM74406.1|AC120497_6 Putative
           retroelement [Oryza sativa Japonica Group]
           gi|31430958|gb|AAP52803.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 986

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
 Frame = -3

Query: 436 SQPLKLYQAKYRTHDLRLTTFVLASKI-------SHTIFTQRDVRLSQIIVFEQKDLNTS 278
           S+ L+ ++  Y THDL L   V A KI       +H      D  L  I  F Q DLN  
Sbjct: 380 SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDDKSLKYI--FTQSDLNLR 437

Query: 277 *KKWLELVKDYEINCH 230
            ++WLEL+KDY++  H
Sbjct: 438 QRRWLELIKDYDLEVH 453



 Score = 46.2 bits (108), Expect(2) = 2e-11
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -2

Query: 230 PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
           P  ANVVA+ALS + H            L  E +++NL +VP      G I TL ++P L
Sbjct: 456 PGKANVVADALSRKGHCNHLRTEGMASELKEEIAQLNLHIVP-----HGQINTLDIQPLL 510

Query: 50  RSRIVDAQRKDESLKE 3
           R++I +AQ+ +E ++E
Sbjct: 511 RTQIEEAQKDNEEIRE 526


>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score = 47.8 bits (112), Expect(2) = 3e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 864  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 923

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 924  RWLELIKDYDLEVH 937



 Score = 45.8 bits (107), Expect(2) = 3e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H            L  E +++NL +VP      G I TL ++P L
Sbjct: 940  PGKANVVADALSRKSHCNHLRTEGMVPELREEMAQLNLHIVP-----HGQINTLDIQPLL 994

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 995  RTQIEEAQKDNEEVRE 1010


>gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 522

 Score = 47.0 bits (110), Expect(2) = 4e-11
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 230 PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
           P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 277 PGKANVVADALSRKSHCNHLRMEGMAPELKEEIAQLNLHIVP-----RGQINTLDIQPLL 331

Query: 50  RSRIVDAQRKDESLKE 3
           R++I +AQ+ +E ++E
Sbjct: 332 RTQIEEAQKDNEEIQE 347



 Score = 46.2 bits (108), Expect(2) = 4e-11
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436 SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
           S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 201 SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNMRQR 260

Query: 271 KWLELVKDYEINCH 230
           +WLEL KDY++  H
Sbjct: 261 RWLELFKDYDLEVH 274


>gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1651

 Score = 48.1 bits (113), Expect(2) = 6e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS + +   A +  +++ L  E  K+ L +VP      GN+ +L V+P L
Sbjct: 1167 PGKANVVADALSRKPYCATALVWPTQDDLCREVEKLKLTVVP-----TGNLASLAVQPTL 1221

Query: 50   RSRIVDAQRKDESLKE 3
             ++I +AQ  D  +KE
Sbjct: 1222 EAQIREAQSDDGIMKE 1237



 Score = 44.3 bits (103), Expect(2) = 6e-11
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI-SHTIFTQR----DVRLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   + A KI  H +   R        S   +F Q +LN   +
Sbjct: 1091 SRQLRPHEVNYPTHDLELAAVIHALKIWRHYLIGNRCEIYTNHKSLKYIFTQSELNMRQR 1150

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY    H
Sbjct: 1151 RWLELIKDYNFGIH 1164


>gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1620

 Score = 47.8 bits (112), Expect(2) = 8e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 1071 SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 1130

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 1131 RWLELIKDYDLEVH 1144



 Score = 44.3 bits (103), Expect(2) = 8e-11
 Identities = 27/76 (35%), Positives = 44/76 (57%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +V     + G I TL + P L
Sbjct: 1147 PGKANVVADALSRKSHCNHLRMEEMAPELKEEIAQLNLHIV-----LRGRINTLDIRPLL 1201

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQR++  ++E
Sbjct: 1202 RTQIEEAQRENREIQE 1217


>emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
          Length = 1606

 Score = 47.8 bits (112), Expect(2) = 8e-11
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 797  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 856

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 857  RWLELIKDYDLEVH 870



 Score = 44.3 bits (103), Expect(2) = 8e-11
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 873  PGKANVVADALSRKSHCNHLRMEGMVPELKEEIAQLNLHIVPC-----GQINTLDIQPLL 927

Query: 50   RSRIVDAQRKDESLKE 3
            R+++ +AQ+ +E ++E
Sbjct: 928  RTQMEEAQKDNEEVRE 943


>gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score = 46.6 bits (109), Expect(2) = 8e-11
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI-------SH-TIFTQRDVRLSQIIVFEQKDLNT 281
            S+ L+ ++  Y THDL L   V A KI       +H  I+T      S   +F Q DLN 
Sbjct: 801  SRQLRPHEENYPTHDLELEAVVHALKIWRHYLIGNHCNIYTDHK---SLKYIFTQSDLNL 857

Query: 280  S*KKWLELVKDYEINCH 230
              ++WLEL+KDY++  H
Sbjct: 858  RQRRWLELIKDYDLEVH 874



 Score = 45.4 bits (106), Expect(2) = 8e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 877  PGKANVVADALSRKSHCNHLRMEGMVPELREEIAQLNLHIVP-----RGQINTLDIQPLL 931

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ  +E ++E
Sbjct: 932  RTQIEEAQMDNEEVRE 947


>gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group]
            gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza
            sativa Japonica Group] gi|31430228|gb|AAP52174.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1569

 Score = 45.8 bits (107), Expect(2) = 1e-10
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A  I   + I    D+     S   +F Q DLN   +
Sbjct: 963  SRQLRPHEENYPTHDLELAAVVHALNIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 1022

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 1023 RWLELIKDYDLEVH 1036



 Score = 45.8 bits (107), Expect(2) = 1e-10
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS ++H            L  E +++NL MVP      G I  L ++P L
Sbjct: 1039 PGKANVVADALSRKSHCNHLRTEGMAPELKEEIAQLNLHMVP-----HGQINNLDIQPLL 1093

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 1094 RTQIEEAQKDNEEIRE 1109


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score = 46.2 bits (108), Expect(2) = 1e-10
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    DV     S    F Q DLN   +
Sbjct: 863  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDVYTDHKSLKYFFTQPDLNLRQR 922

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 923  RWLELIKDYDLGIH 936



 Score = 45.1 bits (105), Expect(2) = 1e-10
 Identities = 29/76 (38%), Positives = 42/76 (55%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P  ANVVA+ALS +       L N    L  E +K+NL ++P      G + +L V P L
Sbjct: 939  PGKANVVADALSRKAQCNHMGLGNMASELQEEMAKLNLHLIP-----HGEVNSLEVRPLL 993

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQR +E  +E
Sbjct: 994  RTQIEEAQRGNEETQE 1009


>gb|ABA95392.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 785

 Score = 46.6 bits (109), Expect(2) = 1e-10
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436 SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
           S+ L+ ++  Y THDL L   V A KI   + I  Q ++     S    F Q DLN   +
Sbjct: 181 SRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNQCEIYTDHKSLKYFFTQPDLNLRQR 240

Query: 271 KWLELVKDYEINCH 230
           +WLEL+KDY++  H
Sbjct: 241 RWLELIKDYDLGIH 254



 Score = 44.7 bits (104), Expect(2) = 1e-10
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -2

Query: 230 PKIANVVANALSHR-NHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPD 54
           P  ANVVA+ALS + +H+  +FL+N  E L  E  K+NLE+V      +G I  L ++P 
Sbjct: 257 PGKANVVADALSRKLHHITASFLVNQPE-LHEEFQKLNLEVVE-----DGFIAALALQPT 310

Query: 53  LRSRIVDAQRKDE 15
           L+S+I  AQ  D+
Sbjct: 311 LQSQIKAAQLTDK 323


>gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 823

 Score = 46.6 bits (109), Expect(2) = 2e-10
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = -2

Query: 230 PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
           P  ANVVA+ALS + H     +      L  E +++NL +VP      G I TL ++P L
Sbjct: 328 PGKANVVADALSRKRHCNHLRMEGMVPKLREEIAQLNLHIVP-----RGQINTLDIQPLL 382

Query: 50  RSRIVDAQRKDESLKE 3
           R++I +AQ+ +E ++E
Sbjct: 383 RTQIEEAQKDNEEIRE 398



 Score = 44.3 bits (103), Expect(2) = 2e-10
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = -3

Query: 424 KLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*KKWLE 260
           K     Y THDL L   V A KI   + I    D+     S   +F Q DLN   ++WLE
Sbjct: 256 KFVWKNYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLE 315

Query: 259 LVKDYEINCH 230
           L+KDY++  H
Sbjct: 316 LIKDYDLEVH 325


>emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]
          Length = 1644

 Score = 47.8 bits (112), Expect(2) = 2e-10
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 436  SQPLKLYQAKYRTHDLRLTTFVLASKI--SHTIFTQRDV---RLSQIIVFEQKDLNTS*K 272
            S+ L+ ++  Y THDL L   V A KI   + I    D+     S   +F Q DLN   +
Sbjct: 954  SRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQR 1013

Query: 271  KWLELVKDYEINCH 230
            +WLEL+KDY++  H
Sbjct: 1014 RWLELIKDYDLEVH 1027



 Score = 42.7 bits (99), Expect(2) = 2e-10
 Identities = 25/76 (32%), Positives = 43/76 (56%)
 Frame = -2

Query: 230  PKIANVVANALSHRNHLKLAFLLNSEESLIHESSKMNLEMVPPPKTMEGNIVTLIVEPDL 51
            P   NVVA+ALS ++H            L  E +++NL ++P      G I TL ++P +
Sbjct: 1030 PGKTNVVADALSQKSHCNHLRTEGMAPELKEEIAQLNLHIIP-----YGQINTLDIQPLM 1084

Query: 50   RSRIVDAQRKDESLKE 3
            R++I +AQ+ +E ++E
Sbjct: 1085 RTQIEEAQKDNEEIRE 1100