BLASTX nr result
ID: Mentha22_contig00044030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha22_contig00044030 (329 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein... 56 5e-06 ref|NP_563981.1| protein TOPLESS [Arabidopsis thaliana] gi|30684... 56 5e-06 >gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein T21F11.18 gi|6730738 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains multiple WD PF|00400 domains. ESTs gb|Z34157, gb|AA006273, gb|AA605431, gb|W43588, gb|W43605, gb|Z34559, gb|R90037, gb|AI994125 come from this gene [Arabidopsis thaliana] Length = 1153 Score = 56.2 bits (134), Expect = 5e-06 Identities = 28/46 (60%), Positives = 30/46 (65%), Gaps = 3/46 (6%) Frame = -3 Query: 327 SDGSVHAIEPHASDGKWGXXXXPENGS---TPITPSVGASSSDQPQ 199 SDG VH EP S+GKWG ENGS P PSVGAS+SDQPQ Sbjct: 1107 SDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGASASDQPQ 1152 >ref|NP_563981.1| protein TOPLESS [Arabidopsis thaliana] gi|30684518|ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] gi|79318004|ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] gi|79318012|ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] gi|75332047|sp|Q94AI7.1|TPL_ARATH RecName: Full=Protein TOPLESS; AltName: Full=WUS-interacting protein 1 gi|15028127|gb|AAK76687.1| unknown protein [Arabidopsis thaliana] gi|23296857|gb|AAN13188.1| unknown protein [Arabidopsis thaliana] gi|332191235|gb|AEE29356.1| protein TOPLESS [Arabidopsis thaliana] gi|332191236|gb|AEE29357.1| protein TOPLESS [Arabidopsis thaliana] gi|332191237|gb|AEE29358.1| protein TOPLESS [Arabidopsis thaliana] gi|332191238|gb|AEE29359.1| protein TOPLESS [Arabidopsis thaliana] Length = 1131 Score = 56.2 bits (134), Expect = 5e-06 Identities = 28/46 (60%), Positives = 30/46 (65%), Gaps = 3/46 (6%) Frame = -3 Query: 327 SDGSVHAIEPHASDGKWGXXXXPENGS---TPITPSVGASSSDQPQ 199 SDG VH EP S+GKWG ENGS P PSVGAS+SDQPQ Sbjct: 1085 SDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGASASDQPQ 1130