BLASTX nr result

ID: Mentha22_contig00044030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00044030
         (329 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein...    56   5e-06
ref|NP_563981.1| protein TOPLESS [Arabidopsis thaliana] gi|30684...    56   5e-06

>gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein T21F11.18 gi|6730738 from
            Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains
            multiple WD PF|00400 domains. ESTs gb|Z34157,
            gb|AA006273, gb|AA605431, gb|W43588, gb|W43605,
            gb|Z34559, gb|R90037, gb|AI994125 come from this gene
            [Arabidopsis thaliana]
          Length = 1153

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/46 (60%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -3

Query: 327  SDGSVHAIEPHASDGKWGXXXXPENGS---TPITPSVGASSSDQPQ 199
            SDG VH  EP  S+GKWG     ENGS    P  PSVGAS+SDQPQ
Sbjct: 1107 SDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGASASDQPQ 1152


>ref|NP_563981.1| protein TOPLESS [Arabidopsis thaliana] gi|30684518|ref|NP_849672.1|
            protein TOPLESS [Arabidopsis thaliana]
            gi|79318004|ref|NP_001031050.1| protein TOPLESS
            [Arabidopsis thaliana] gi|79318012|ref|NP_001031051.1|
            protein TOPLESS [Arabidopsis thaliana]
            gi|75332047|sp|Q94AI7.1|TPL_ARATH RecName: Full=Protein
            TOPLESS; AltName: Full=WUS-interacting protein 1
            gi|15028127|gb|AAK76687.1| unknown protein [Arabidopsis
            thaliana] gi|23296857|gb|AAN13188.1| unknown protein
            [Arabidopsis thaliana] gi|332191235|gb|AEE29356.1|
            protein TOPLESS [Arabidopsis thaliana]
            gi|332191236|gb|AEE29357.1| protein TOPLESS [Arabidopsis
            thaliana] gi|332191237|gb|AEE29358.1| protein TOPLESS
            [Arabidopsis thaliana] gi|332191238|gb|AEE29359.1|
            protein TOPLESS [Arabidopsis thaliana]
          Length = 1131

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/46 (60%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -3

Query: 327  SDGSVHAIEPHASDGKWGXXXXPENGS---TPITPSVGASSSDQPQ 199
            SDG VH  EP  S+GKWG     ENGS    P  PSVGAS+SDQPQ
Sbjct: 1085 SDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGASASDQPQ 1130


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