BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00043792
         (994 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39565.1| hypothetical protein MIMGU_mgv1a003555mg [Mimulus...   571   e-160
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi...   545   e-152
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi...   544   e-152
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258...   520   e-145
ref|XP_007214219.1| hypothetical protein PRUPE_ppa023254mg [Prun...   518   e-144
ref|XP_007026426.1| Tetratricopeptide repeat-like superfamily pr...   511   e-142
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]     503   e-140
ref|XP_002308737.1| pentatricopeptide repeat-containing family p...   498   e-138
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi...   497   e-138
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   494   e-137
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   493   e-137
sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-c...   491   e-136
ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutr...   491   e-136
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]   491   e-136
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...   484   e-134
ref|NP_189042.4| pentatricopeptide repeat-containing protein [Ar...   481   e-133
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps...   480   e-133
ref|XP_004498496.1| PREDICTED: pentatricopeptide repeat-containi...   476   e-132
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   461   e-127

>gb|EYU39565.1| hypothetical protein MIMGU_mgv1a003555mg [Mimulus guttatus]
          Length = 578

 Score =  571 bits (1472), Expect = e-160
 Identities = 268/331 (80%), Positives = 304/331 (91%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMYGKAGSI DAKKVFDRL KKD+VSWNSMLT+YAQHG G++A+DLFEEMR  GF
Sbjct: 245  GNTLLDMYGKAGSIDDAKKVFDRLVKKDIVSWNSMLTSYAQHGLGEKAVDLFEEMRGFGF 304

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            QPN+ITFLCV+NACSH+GLL++GLYYFE++RKY LEPDITHYV +VDLLGR G+L++A+ 
Sbjct: 305  QPNKITFLCVLNACSHSGLLDRGLYYFELLRKYKLEPDITHYVTVVDLLGRAGQLDRAQT 364

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI EM I PTAAVWKALLGACRMHKNMELG YAAERVFELDPHDSGPHMLLSN+YASAGR
Sbjct: 365  FISEMTILPTAAVWKALLGACRMHKNMELGAYAAERVFELDPHDSGPHMLLSNMYASAGR 424

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
            L+DAARVRKMM+E+G+KKEPACSWVEIGNSVH+FVAND  HPQ +EI   W++IRD I+K
Sbjct: 425  LSDAARVRKMMNENGVKKEPACSWVEIGNSVHVFVANDENHPQREEIRRKWEEIRDGIEK 484

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVLW++DE ER ERLQYHSEKLALAFA+LNT  G+ ISIKKNIRVCGDCHSA
Sbjct: 485  IGYVPDTSHVLWFLDERERGERLQYHSEKLALAFAILNTAAGTTISIKKNIRVCGDCHSA 544

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
            F+FVS+L  +EI+LRDTNRFHHFR+GSCSCR
Sbjct: 545  FRFVSRLVGQEIVLRDTNRFHHFRSGSCSCR 575



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 77/323 (23%), Positives = 129/323 (39%), Gaps = 62/323 (19%)
 Frame = +1

Query: 7   TLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQP 186
           T+++MY K G +  A+K FD + ++D+VS+  ++T Y+Q    KEA+DL+ EM  +G QP
Sbjct: 45  TVVNMYAKCGDMELARKAFDEMPERDMVSYTMLITGYSQSNGFKEALDLYVEMLKMGLQP 104

Query: 187 NEITFLCVINA-------------------CSHTGLLEKGLYYFEMMRKYNLEPDI---- 297
           NE TF   +                     C +   +  G    +M  +     D     
Sbjct: 105 NEFTFGSALKCAGGMQSDAMGRVIHGTCLKCGYDNNVYVGSALVDMYTRCKRIDDAKAIF 164

Query: 298 --------THYVAIVDLLGRGGELEKAERFIKEMK---IQPTAAVWKALLGACRMHKNME 444
                     + A++    R GE   A     EMK     PT   + ++  AC  +  +E
Sbjct: 165 NGLECKNEVSWNALIAAYAREGEGHNAVELFSEMKRVGFNPTHFTYSSIFAACASNGALE 224

Query: 445 LGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARVRKMMSESGIK--KEP 600
            G +        D   SG  ++      L ++Y  AG ++DA +V   + +  I      
Sbjct: 225 QGKWV-----HADMLKSGQKLVAFVGNTLLDMYGKAGSIDDAKKVFDRLVKKDIVSWNSM 279

Query: 601 ACSWVEIG---NSVHLF-----------------VANDCKHPQIKEIHLTWDKIRDEIKK 720
             S+ + G    +V LF                 V N C H  + +  L + ++   ++K
Sbjct: 280 LTSYAQHGLGEKAVDLFEEMRGFGFQPNKITFLCVLNACSHSGLLDRGLYYFEL---LRK 336

Query: 721 IGYVPDTSHVLWYVDELEREERL 789
               PD +H +  VD L R  +L
Sbjct: 337 YKLEPDITHYVTVVDLLGRAGQL 359


>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Solanum lycopersicum]
          Length = 653

 Score =  545 bits (1403), Expect = e-152
 Identities = 252/330 (76%), Positives = 297/330 (90%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+KVFDRL KKDVVSWNSMLTAYAQHG G E ++ FEEM  +G 
Sbjct: 320  GNTLLDMYAKSGSIDDARKVFDRLVKKDVVSWNSMLTAYAQHGLGIETVECFEEMCRIGP 379

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNE+TFLC + ACSH GLL+ G++YFE+M+K+ +EP+I+HYV IVDLLGR G+L++AE+
Sbjct: 380  EPNEVTFLCALTACSHAGLLDNGMHYFELMKKFKIEPNISHYVTIVDLLGRSGQLDRAEK 439

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI EM I+P+AA+WKALLGACRMHK +ELG+YAAERVFELDPHDSGPH+LLSNIYASAGR
Sbjct: 440  FINEMPIEPSAAIWKALLGACRMHKKLELGVYAAERVFELDPHDSGPHILLSNIYASAGR 499

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             +DAARVRKMM++SG+KKEPACSWVEI N+VH+FVAND  HPQ +EI   W+KI D+IK+
Sbjct: 500  RSDAARVRKMMNQSGVKKEPACSWVEIENAVHMFVANDDAHPQREEIRNMWEKITDKIKE 559

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVLW++D+ EREERLQYHSE+LALAFALLN+P GSPI IKKNIRVCGDCH+A
Sbjct: 560  IGYVPDTSHVLWFMDQQEREERLQYHSERLALAFALLNSPSGSPIRIKKNIRVCGDCHTA 619

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
            FKFVSK+ +REIILRDTNRFHHFRNGSCSC
Sbjct: 620  FKFVSKVVDREIILRDTNRFHHFRNGSCSC 649



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 52/155 (33%), Positives = 81/155 (52%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ L+DMY + G + + K VFD+L  K+ VSWN ++  +A+ G G+ A+ LF EM+  GF
Sbjct: 219 GSALVDMYARCGLMDEGKIVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGF 278

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           QP   TF  V  AC++ G LE G +    M K  LE        ++D+  + G ++ A +
Sbjct: 279 QPTHFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARK 338

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAE 465
               + ++     W ++L A   H    LGI   E
Sbjct: 339 VFDRL-VKKDVVSWNSMLTAYAQH---GLGIETVE 369



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTL++MY K  S+ DA+KVFD + ++D+VSW +++T Y+Q+   KE + LF EM   GF 
Sbjct: 119 NTLINMYAKCESMGDARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFM 178

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PN+ TF  VI A         G        K   E ++    A+VD+  R G +++ +  
Sbjct: 179 PNQFTFGSVIKAAGALESDSTGRQLHGACVKCGYEDNVYVGSALVDMYARCGLMDEGKIV 238

Query: 364 IKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIYASA-- 534
             ++  +   + W  L+     H     G  A +   E+      P H   S++YA+   
Sbjct: 239 FDKLSCKNEVS-WNGLIAG---HARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACAN 294

Query: 535 -GRLNDAARVRKMMSESGIK 591
            G L     V   M +SG++
Sbjct: 295 IGALEPGKWVHVHMIKSGLE 314


>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Solanum tuberosum]
          Length = 654

 Score =  544 bits (1401), Expect = e-152
 Identities = 253/330 (76%), Positives = 295/330 (89%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+KVFDRL KKDVVSWNSMLTAYAQHG GKE ++ FEEM  +G 
Sbjct: 321  GNTLLDMYAKSGSIDDARKVFDRLLKKDVVSWNSMLTAYAQHGLGKETVECFEEMCRIGP 380

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNE+TFLC + ACSH GLL+ G++YFE+M+K+ +EP I+HYV IVDLLGR G+L++AE+
Sbjct: 381  EPNEVTFLCALTACSHAGLLDNGMHYFELMKKFKIEPIISHYVTIVDLLGRSGQLDRAEK 440

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI EM I+PTAAVWKALLGACRMHKN+ELG+YAAE VFELDPHDSGPH+LLSNIYASAGR
Sbjct: 441  FINEMPIEPTAAVWKALLGACRMHKNLELGVYAAEHVFELDPHDSGPHILLSNIYASAGR 500

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             +DAARVRK+M++SG+KKEPACSWVEI N+VH+FVAND  HPQ +EI   W+ I D+IK+
Sbjct: 501  RSDAARVRKLMNQSGVKKEPACSWVEIENAVHMFVANDDAHPQREEIRNMWENITDKIKE 560

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVLW++D  EREERLQYHSE+LALAFALLN+P GSPI IKKNIRVCGDCH+A
Sbjct: 561  IGYVPDTSHVLWFMDHQEREERLQYHSERLALAFALLNSPHGSPIRIKKNIRVCGDCHTA 620

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
            FKFVSK+ +REIILRDTNRFHHFRNGSCSC
Sbjct: 621  FKFVSKVVDREIILRDTNRFHHFRNGSCSC 650



 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ L+DMY + G + + K VFD+L  K+ VSWN ++  +A+ G G+ A+ LF EM+  GF
Sbjct: 220 GSALVDMYARCGLMDEGKIVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGF 279

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           QP   TF  V  AC++ G LE G +    M K  LE        ++D+  + G ++ A +
Sbjct: 280 QPTHFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARK 339

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYAS-AG 537
               + ++     W ++L A   H   +  +   E +  + P  +    L +    S AG
Sbjct: 340 VFDRL-LKKDVVSWNSMLTAYAQHGLGKETVECFEEMCRIGPEPNEVTFLCALTACSHAG 398

Query: 538 RLNDAARVRKMMSESGIKKEPACS 609
            L++     ++M +   K EP  S
Sbjct: 399 LLDNGMHYFELMKK--FKIEPIIS 420



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTL++MY K  S+ DA+KVFD + ++D+VSW +++T Y+Q+   KE + LF EM   GF 
Sbjct: 120 NTLINMYAKCESMGDARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFM 179

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEM---MRKYNLEPDITHYVAIVDLLGRGGELEKA 354
           PN+ TF  V+ A    G LE G    ++     K   E ++    A+VD+  R G +++ 
Sbjct: 180 PNQFTFGSVLKA---AGALESGGTGRQLHGGCVKCGYEENVYVGSALVDMYARCGLMDEG 236

Query: 355 ERFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIYAS 531
           +    ++  +   + W  L+     H     G  A +   E+      P H   S++YA+
Sbjct: 237 KIVFDKLSCKNEVS-WNGLIAG---HARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAA 292

Query: 532 A---GRLNDAARVRKMMSESGIK 591
               G L     V   M +SG++
Sbjct: 293 CANIGALEPGKWVHVHMIKSGLE 315


>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  520 bits (1339), Expect = e-145
 Identities = 248/327 (75%), Positives = 285/327 (87%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY KAGSI DAK+VFDRL K DVVSWN+MLT  AQHG GKE +D FE+M  +G 
Sbjct: 328  GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FLCV+ ACSH+GLL++GLYYFE+M+KY +EPD+ HYV  VDLLGR G L++AER
Sbjct: 388  EPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKNMELG+YAAER FELDPHDSGP MLLSNIYASAGR
Sbjct: 448  FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
              D A+VRKMM ESG+KK+PACSWVEI N+VHLFVAND  HP+IKEI   W++I  +IK+
Sbjct: 508  WRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKE 567

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL +VD+ EREE+LQYHSEKLALAFALLNTP GSPI IKKNIRVCGDCH+A
Sbjct: 568  IGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAA 627

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGS 981
             KFVSK+ +REII+RDTNRFH FR+GS
Sbjct: 628  IKFVSKVVDREIIVRDTNRFHRFRDGS 654



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 4/200 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N +++MY K G + DA+++FD +  KD+V+W +++  ++Q+   ++A+ LF +M  LGFQ
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PN  T   ++ A      L+ G        KY  +  +    A+VD+  R G ++ A+  
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246

Query: 364 IKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY---AS 531
              M  +   + W AL+     H     G +A   ++++   +  P H   S++    AS
Sbjct: 247 FDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302

Query: 532 AGRLNDAARVRKMMSESGIK 591
            G L     V   M +SG+K
Sbjct: 303 IGALEQGKWVHAHMIKSGLK 322



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 43/144 (29%), Positives = 77/144 (53%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ L+DMY + G +  A+  FD +  K  VSWN++++ +A+ G G+ A+ L  +M+   F
Sbjct: 227 GSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           QP   T+  V++AC+  G LE+G +    M K  L+        ++D+  + G ++ A+R
Sbjct: 287 QPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               + ++P    W  +L  C  H
Sbjct: 347 VFDRL-VKPDVVSWNTMLTGCAQH 369


>ref|XP_007214219.1| hypothetical protein PRUPE_ppa023254mg [Prunus persica]
            gi|462410084|gb|EMJ15418.1| hypothetical protein
            PRUPE_ppa023254mg [Prunus persica]
          Length = 563

 Score =  518 bits (1334), Expect = e-144
 Identities = 245/331 (74%), Positives = 285/331 (86%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+KVFDRL ++D+VSWNSMLT YAQHG G+E +  FEEM  +G 
Sbjct: 230  GNTLLDMYAKSGSIEDARKVFDRLVRQDIVSWNSMLTGYAQHGLGQETVQRFEEMLRIGI 289

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            QPN+ITFLCV+ ACSH GLL++G YYF++M+ YN+E  I+HYV IVDLLGR G L++A +
Sbjct: 290  QPNDITFLCVLTACSHAGLLDEGQYYFDLMKSYNIELQISHYVTIVDLLGRAGLLDRAAK 349

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKN++LG YAAERVFELDPHDSGPH+LLSNIYASAGR
Sbjct: 350  FIREMPIEPTAAVWGALLGACRMHKNIDLGAYAAERVFELDPHDSGPHVLLSNIYASAGR 409

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
            L+DAARVRK+M + G+KKEPACSWVEI N+VH+FVAND  HPQ  EI   W+ I  +IK 
Sbjct: 410  LSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIKD 469

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL++VD+ ERE +LQYHSEKLALAFALLNT  GS I IKKNIRVCGDCHSA
Sbjct: 470  IGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHSA 529

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
             K+VSK+E REII+RDTNRFHHFRNGSCSCR
Sbjct: 530  IKYVSKVEGREIIVRDTNRFHHFRNGSCSCR 560



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NT+L+MY K GS+ DA+ +FD++  KD+V+W ++++ Y+Q+   ++A+ LF +M   G +
Sbjct: 27  NTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALISGYSQYDRPQDALVLFPQMLLRGLE 86

Query: 184 PNEITFLCVINACSHTG--LLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
           PN+ T   +  A         + G        KY  + ++    ++VD+  R G +++++
Sbjct: 87  PNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGFDTNVYVGTSLVDMYARWGHMDESQ 146

Query: 358 RFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY--- 525
                ++ +   + W AL+     H     G +A    +++      P H   S+++   
Sbjct: 147 LIFDSLETKNEVS-WNALIAG---HARKAQGEHALRLFWKMLREGFKPTHFTYSSVFTAC 202

Query: 526 ASAGRLNDAARVRKMMSESGIK 591
           ASAG +     V   M +SG K
Sbjct: 203 ASAGSMEQGKWVHAHMIKSGAK 224



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 40/144 (27%), Positives = 75/144 (52%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G +L+DMY + G + +++ +FD LE K+ VSWN+++  +A+   G+ A+ LF +M   GF
Sbjct: 129 GTSLVDMYARWGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWKMLREGF 188

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P   T+  V  AC+  G +E+G +    M K   +        ++D+  + G +E A +
Sbjct: 189 KPTHFTYSSVFTACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARK 248

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               + ++     W ++L     H
Sbjct: 249 VFDRL-VRQDIVSWNSMLTGYAQH 271


>ref|XP_007026426.1| Tetratricopeptide repeat-like superfamily protein isoform 1
            [Theobroma cacao] gi|590627358|ref|XP_007026427.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|590627361|ref|XP_007026428.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508781792|gb|EOY29048.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508781793|gb|EOY29049.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
            Tetratricopeptide repeat-like superfamily protein isoform
            1 [Theobroma cacao]
          Length = 675

 Score =  511 bits (1317), Expect = e-142
 Identities = 245/330 (74%), Positives = 281/330 (85%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLL MY K+GSI DAK +FDRL K DVVSWNSMLTAYAQHG GKEA+  F+EM  +G 
Sbjct: 342  GNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLTAYAQHGLGKEAVQWFQEMLRIGV 401

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
             PN+ITFLC++ ACS  GLL++G YYF++M  YN+EP I+HYV IVDL GR G L+KAER
Sbjct: 402  GPNDITFLCLLTACSRAGLLDQGQYYFKLMSNYNIEPQISHYVTIVDLFGRAGLLDKAER 461

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKNMELG YAAERVFELDPHDSGP +LLSNIYASAGR
Sbjct: 462  FIREMPIKPTAAVWGALLGACRMHKNMELGTYAAERVFELDPHDSGPLVLLSNIYASAGR 521

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             +DAA+VRKMM ESG+KKEPACSWVEI N+VH+FVAND  HPQ++EIH  W++I   IK+
Sbjct: 522  WSDAAKVRKMMKESGVKKEPACSWVEIENTVHVFVANDDAHPQMEEIHKMWEEISARIKE 581

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPD SHVL+Y+D+ ERE +LQYHSEKLALAFALLN+  GS I IKKNIRVCGDCHSA
Sbjct: 582  IGYVPDISHVLFYMDQQEREIKLQYHSEKLALAFALLNSSPGSTIRIKKNIRVCGDCHSA 641

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
             KFVS++  REII+RDTNRFHHFR GSCSC
Sbjct: 642  IKFVSQVVRREIIVRDTNRFHHFRGGSCSC 671



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++LLDMY + G + +A+ +FD L  K+ VSWN+++  +A+ G    A+ LF +M    F
Sbjct: 241 GSSLLDMYARCGCMDEARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDF 300

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           QP   TF  ++ AC+ TG LE+G +    + K   E        ++ +  + G ++ A +
Sbjct: 301 QPTHFTFCSILGACASTGSLEQGKWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDA-K 359

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPH----MLLSNIYA 528
            I +  ++     W ++L A   H    LG  A +   E+     GP+    + L    +
Sbjct: 360 MIFDRLVKSDVVSWNSMLTAYAQH---GLGKEAVQWFQEMLRIGVGPNDITFLCLLTACS 416

Query: 529 SAGRLNDAARVRKMMSESGIKKE 597
            AG L+      K+MS   I+ +
Sbjct: 417 RAGLLDQGQYYFKLMSNYNIEPQ 439



 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 44/239 (18%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N+LL+MY K G + DA+ +FD++  KD+VSW +++TAY+QHG    AI LF  M SLGF 
Sbjct: 137 NSLLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHMLSLGFF 196

Query: 184 PNEITFLCVINA--------------------CSHTGL---LEKGLYYFEM------MRK 276
           PN+ T   ++ A                    C   GL   +  G    +M      M +
Sbjct: 197 PNQFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDE 256

Query: 277 YNLEPDITH------YVAIVDLLGRGGELEKAERFIKEM---KIQPTAAVWKALLGACRM 429
             L  D  H      + A++    R G+ + A    ++M     QPT   + ++LGAC  
Sbjct: 257 ARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSILGACAS 316

Query: 430 HKNMELGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARVRKMMSESGI 588
             ++E G +    V +     SG  ++      L ++YA +G + DA  +   + +S +
Sbjct: 317 TGSLEQGKWVHAHVIK-----SGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDV 370


>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
          Length = 750

 Score =  503 bits (1296), Expect = e-140
 Identities = 238/330 (72%), Positives = 280/330 (84%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DAKKVFDRL K+DVVSWNSML  YAQHG G++ +  FEEM + G 
Sbjct: 417  GNTLLDMYAKSGSIEDAKKVFDRLVKRDVVSWNSMLRGYAQHGLGRKTVQHFEEMMTSGI 476

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +P  +TFL V+ ACSH GLL++G +YFE+M+KY +EPD+ HYV +VDLLGR G L++AER
Sbjct: 477  EPISVTFLSVLTACSHAGLLDEGRHYFELMKKYKVEPDVLHYVTMVDLLGRAGLLDQAER 536

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            +I+EM I+P+AAVW ALLGACRMHKNMELG YAAERVFELDP DSGPH+LL N+YASAGR
Sbjct: 537  YIREMPIEPSAAVWGALLGACRMHKNMELGAYAAERVFELDPQDSGPHILLYNMYASAGR 596

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
              +AA+VRKMM ESG+KKEPACSWVEI N+VH+F+AND  HPQ +EI   W+KI  +I++
Sbjct: 597  WQEAAKVRKMMKESGVKKEPACSWVEIENAVHMFIANDDAHPQWQEIREMWEKISGKIRE 656

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL +VD+ ERE +LQYHSEKLALAFALLNTP GS I IKKNIRVCGDCHSA
Sbjct: 657  IGYVPDTSHVLLFVDQQEREVKLQYHSEKLALAFALLNTPLGSTIRIKKNIRVCGDCHSA 716

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
             K+VSK+  REII+RDTNRFHHF NGSCSC
Sbjct: 717  IKYVSKVVGREIIVRDTNRFHHFHNGSCSC 746



 Score =  104 bits (260), Expect = 5e-20
 Identities = 56/144 (38%), Positives = 81/144 (56%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           GNTLLDMY K+GSI DAKKVFDRL K+DVVSWNSML  YA+ G  + A+ LF  M    F
Sbjct: 316 GNTLLDMYAKSGSIEDAKKVFDRLVKRDVVSWNSMLNGYARKGETENALRLFSMMHREDF 375

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P + T+  +  AC+ TG LE+G +    + K            ++D+  + G +E A++
Sbjct: 376 KPTDFTYSSLCTACASTGSLEQGKWVHAHVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKK 435

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               + ++     W ++L     H
Sbjct: 436 VFDRL-VKRDVVSWNSMLRGYAQH 458



 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 45/138 (32%), Positives = 75/138 (54%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           GNT+L+MY K GS+ DA+K+FD +  KD+V+W ++++ Y+QH   +EA+ LF  M   G 
Sbjct: 114 GNTILNMYAKCGSLADARKLFDEMPLKDIVTWTALISGYSQHDQAEEALALFPLMLRRGL 173

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +PN+ T   ++ A       ++G        K   + D+    ++VD+  R G L +A R
Sbjct: 174 EPNQFTLSSLLKASGDGTTNKRGRQLHAYCLKCGYDSDVYVGSSLVDMYARYGHLVEA-R 232

Query: 361 FIKEMKIQPTAAVWKALL 414
            I +  +      W AL+
Sbjct: 233 LIFDGLVTKNEVSWNALI 250



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++L+DMY + G + +A+ +FD L  K+ VSWN+++  +++ G  + A+ LF  M    F
Sbjct: 215 GSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNALIAGHSRKGETENALRLFSMMHREDF 274

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYN-------------------------- 282
           +P   TF  +  AC+ TG LE+G +    + K                            
Sbjct: 275 KPTHFTFSSLCTACASTGSLEQGKWVHAQVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKK 334

Query: 283 -----LEPDITHYVAIVDLLGRGGELEKAERFIKEM---KIQPTAAVWKALLGACRMHKN 438
                ++ D+  + ++++   R GE E A R    M     +PT   + +L  AC    +
Sbjct: 335 VFDRLVKRDVVSWNSMLNGYARKGETENALRLFSMMHREDFKPTDFTYSSLCTACASTGS 394

Query: 439 MELGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARV 561
           +E G +    V +     SG  ++      L ++YA +G + DA +V
Sbjct: 395 LEQGKWVHAHVIK-----SGGRLVAFVGNTLLDMYAKSGSIEDAKKV 436


>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222854713|gb|EEE92260.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 590

 Score =  498 bits (1281), Expect = e-138
 Identities = 239/330 (72%), Positives = 277/330 (83%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DAKKVFDRL K+DVVSWNSMLT Y+QHG GK A+  FEEM     
Sbjct: 257  GNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
             PN+ITFLCV+ ACSH GLL++G +YF+MM+KYN+EP I+HYV +VDLLGR G L++A +
Sbjct: 317  APNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI EM I+PTAAVW ALLGACRMHKNMELG YAAE +FELD H  G H+LL NIYA AGR
Sbjct: 377  FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAA+VRKMM ESG+KKEPACSWVE+ N VH+FVA+D  HPQ +EIH  W++I D+IK+
Sbjct: 437  WNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKE 496

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPD+SHVL  +D+ ERE +LQYHSEKLALAFALLNTP GS I IKKNIR+CGDCHSA
Sbjct: 497  IGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSA 556

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
            FKFVSKL  REII+RDTNRFHHF +G+CSC
Sbjct: 557  FKFVSKLVEREIIVRDTNRFHHFCDGACSC 586



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTLL++Y K G +  A+K+FD +  +DVV+W +++T Y+QH   ++A+ L  EM  +G +
Sbjct: 54  NTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113

Query: 184 PNEITFLCVINACSHTGLLE--KGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
           PN+ T   ++ A S  G  +  +G     +  +Y  + ++    AI+D+  R   LE+A+
Sbjct: 114 PNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ 173

Query: 358 RFIKEMKIQPTAAVWKALL 414
             I ++ +      W AL+
Sbjct: 174 -LIFDVMVSKNEVSWNALI 191



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
 Frame = +1

Query: 10  LLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQPN 189
           +LDMY +   + +A+ +FD +  K+ VSWN+++  YA+ G G +A  LF  M     +P 
Sbjct: 159 ILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPT 218

Query: 190 EITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERFIK 369
             T+  V+ AC+  G LE+G +   +M K+  +        ++D+  + G +E A++   
Sbjct: 219 HFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFD 278

Query: 370 EMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPH----MLLSNIYASAG 537
            +  +   + W ++L     H    LG  A +R  E+      P+    + +    + AG
Sbjct: 279 RLAKRDVVS-WNSMLTGYSQH---GLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAG 334

Query: 538 RLNDAARVRKMMSESGIKKE 597
            L++      MM +  ++ +
Sbjct: 335 LLDEGRHYFDMMKKYNVEPQ 354


>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 650

 Score =  497 bits (1280), Expect = e-138
 Identities = 234/331 (70%), Positives = 282/331 (85%), Gaps = 1/331 (0%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+KVFDRL K+DVVSWNSMLT YAQHG G E + LFEEM  +G 
Sbjct: 316  GNTLLDMYAKSGSIEDARKVFDRLVKRDVVSWNSMLTGYAQHGLGTETVQLFEEMLRIGV 375

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRK-YNLEPDITHYVAIVDLLGRGGELEKAE 357
            QPN+I+FLCV+ ACSH+ LL++G YYF +MRK + +EP + HYV +VDLLGR G L++A+
Sbjct: 376  QPNDISFLCVLTACSHSHLLDEGQYYFHLMRKKFKIEPQVFHYVTMVDLLGRAGLLDRAD 435

Query: 358  RFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAG 537
            +FI+EM  +PTAAVW ALLGACRMH N++LG YAA+  FELDP DSGP+++L+N+YASAG
Sbjct: 436  KFIREMPTEPTAAVWGALLGACRMHNNIDLGAYAAKWAFELDPSDSGPYIILANMYASAG 495

Query: 538  RLNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIK 717
            RLNDAA+VRKMM E G+KKEPACSWVEI N+VH+FVAND  HPQ  EI+  W+ I  +IK
Sbjct: 496  RLNDAAKVRKMMKEGGVKKEPACSWVEIENAVHMFVANDDAHPQRAEIYRRWEMISKKIK 555

Query: 718  KIGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHS 897
            +IGYVPDTSHVL++VD+ ERE +LQ+HSEK+ALAFALLNTP GS I IKKNIRVCGDCHS
Sbjct: 556  EIGYVPDTSHVLFFVDQQEREFKLQFHSEKIALAFALLNTPPGSTIRIKKNIRVCGDCHS 615

Query: 898  AFKFVSKLENREIILRDTNRFHHFRNGSCSC 990
            A K+VSK+E REII+RDTNRFHHFR+GSCSC
Sbjct: 616  AIKYVSKVERREIIVRDTNRFHHFRDGSCSC 646



 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 40/144 (27%), Positives = 73/144 (50%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G +L+DMY + G + D++ +FD L  K+ VSWN+++  +A+ G G+ A+ LF  M   GF
Sbjct: 215 GTSLVDMYARCGLMDDSQIIFDALRTKNEVSWNALIAGHARKGQGEHALRLFWNMLRGGF 274

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P   T+  V   C+  G +E+G +    M K  +         ++D+  + G +E A +
Sbjct: 275 KPTHFTYSSVFTVCASAGSMEQGKWVHSHMIKSGVNLVAFVGNTLLDMYAKSGSIEDARK 334

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               + ++     W ++L     H
Sbjct: 335 VFDRL-VKRDVVSWNSMLTGYAQH 357



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTLL+ Y K GS+  A  +FD +  +D+V+W S+++ Y+Q    +E++ LF  M   G  
Sbjct: 113 NTLLNTYVKCGSLDHAHHLFDEMPHRDLVTWTSLISGYSQLDRPRESLVLFPHMLRHGLV 172

Query: 184 PNEITFLCVINACSHTGLLE--KGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
           PN+ T   ++ A       +   G        K   + ++    ++VD+  R G ++ ++
Sbjct: 173 PNQFTLSSLLKAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGLMDDSQ 232

Query: 358 RFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY--- 525
                ++ +   + W AL+     H     G +A    + +      P H   S+++   
Sbjct: 233 IIFDALRTKNEVS-WNALIAG---HARKGQGEHALRLFWNMLRGGFKPTHFTYSSVFTVC 288

Query: 526 ASAGRLNDAARVRKMMSESGI 588
           ASAG +     V   M +SG+
Sbjct: 289 ASAGSMEQGKWVHSHMIKSGV 309


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  494 bits (1273), Expect = e-137
 Identities = 230/331 (69%), Positives = 280/331 (84%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTL+DMY K+GSI DAKKVF RL K+D+VSWNS+++ YAQHG G EA+ LFE+M     
Sbjct: 344  GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 403

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            QPNEITFL V+ ACSH+GLL++G YYFE+M+K+ +E  + H+V +VDLLGR G L +A +
Sbjct: 404  QPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANK 463

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKNM+LG+YAAE++FELDPHDSGPH+LLSNIYASAGR
Sbjct: 464  FIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGR 523

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
            L+DAA+VRKMM ESG+KKEPACSWVEI N VH+FVAND  HP  +EI   W+KI  +IK+
Sbjct: 524  LSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKE 583

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL+++++ +RE +LQYHSEKLALAFA+L TP G  I IKKNIR+CGDCHSA
Sbjct: 584  IGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSA 643

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
            FKF S++  REII+RDTNRFHHF +G CSCR
Sbjct: 644  FKFASRVLGREIIVRDTNRFHHFLHGMCSCR 674



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 35/236 (14%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++LLDMY +   + +AK +F+ L  K+VVSWN+++  +A+ G G+  + LF +M   GF
Sbjct: 244 GSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGF 303

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P   T+  V+ AC+ +G LE+G +    + K   +P       ++D+  + G ++ A++
Sbjct: 304 EPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 362

Query: 361 FIKEM----------------------------------KIQPTAAVWKALLGACRMHKN 438
             + +                                  K+QP    + ++L AC     
Sbjct: 363 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGL 422

Query: 439 MELGIYAAERVFELD-PHDSGPHMLLSNIYASAGRLNDAARVRKMMSESGIKKEPA 603
           ++ G Y  E + +         H+ + ++   AGRLN+A    K + E  IK   A
Sbjct: 423 LDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA---NKFIEEMPIKPTAA 475



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 41/137 (29%), Positives = 72/137 (52%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N +L+MY K GS+ +A+ +FD++  KD+VSW  +++ Y+Q G   EA+ LF +M  LGFQ
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PNE T   ++ A         G        KY  + ++    +++D+  R   + +A+  
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 364 IKEMKIQPTAAVWKALL 414
              +  +   + W AL+
Sbjct: 264 FNSLAAKNVVS-WNALI 279


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  493 bits (1270), Expect = e-137
 Identities = 229/331 (69%), Positives = 280/331 (84%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTL+DMY K+GSI DAKKVF RL K+D+VSWNS+++ YAQHG G EA+ LFE+M     
Sbjct: 345  GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 404

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            QPNEITFL V+ ACSH+GLL++G YYFE+M+K+ +E  + H+V +VDLLGR G L +A +
Sbjct: 405  QPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANK 464

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLG+CRMHKNM+LG+YAAE++FELDPHDSGPH+LLSNIYASAGR
Sbjct: 465  FIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGR 524

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
            L+DAA+VRKMM ESG+KKEPACSWVEI N VH+FVAND  HP  +EI   W+KI  +IK+
Sbjct: 525  LSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKE 584

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL+++++ +RE +LQYHSEKLALAFA+L TP G  I IKKNIR+CGDCHSA
Sbjct: 585  IGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSA 644

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
            FKF S++  REII+RDTNRFHHF +G CSCR
Sbjct: 645  FKFASRVLGREIIVRDTNRFHHFLHGMCSCR 675



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++LLDMY +   + +AK +F+ L  K+VVSWN+++  +A+ G G+  + LF +M   GF
Sbjct: 244 GSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGF 303

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P   T+  V  AC+ +G LE+G +    + K   +P       ++D+  + G ++ A++
Sbjct: 304 EPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 363

Query: 361 FIKEM----------------------------------KIQPTAAVWKALLGACRMHKN 438
             + +                                  K+QP    + ++L AC     
Sbjct: 364 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGL 423

Query: 439 MELGIYAAERVFELD-PHDSGPHMLLSNIYASAGRLNDAARVRKMMSESGIKKEPA 603
           ++ G Y  E + +         H+ + ++   AGRLN+A    K + E  IK   A
Sbjct: 424 LDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA---NKFIEEMPIKPTAA 476



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N +L+MY K GS+ +A+ +FD++  KD+VSW  +++ Y+Q G   EA+ LF +M  LGFQ
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PNE T   ++ A         G        KY  + ++    +++D+  R   + +A+  
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 364 IKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY---AS 531
              +  +   + W AL+     H     G +      ++      P H   S+++   AS
Sbjct: 264 FNSLAAKNVVS-WNALIAG---HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACAS 319

Query: 532 AGRLNDAARVRKMMSESG 585
           +G L     V   + +SG
Sbjct: 320 SGSLEQGKWVHAHVIKSG 337


>sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial; Flags: Precursor
            gi|9294669|dbj|BAB03018.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 633

 Score =  491 bits (1264), Expect = e-136
 Identities = 229/331 (69%), Positives = 279/331 (84%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+K+FDRL K+DVVSWNS+LTAYAQHG GKEA+  FEEMR +G 
Sbjct: 300  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FL V+ ACSH+GLL++G +Y+E+M+K  + P+  HYV +VDLLGR G+L +A R
Sbjct: 360  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAA+WKALL ACRMHKN ELG YAAE VFELDP D GPH++L NIYAS GR
Sbjct: 420  FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAARVRK M ESG+KKEPACSWVEI N++H+FVAND +HPQ +EI   W+++  +IK+
Sbjct: 480  WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            +GYVPDTSHV+ +VD+ ERE  LQYHSEK+ALAFALLNTP GS I IKKNIRVCGDCH+A
Sbjct: 540  LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
             K  SK+  REII+RDTNRFHHF++G+CSC+
Sbjct: 600  IKLASKVVGREIIVRDTNRFHHFKDGNCSCK 630



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 43/144 (29%), Positives = 78/144 (54%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ LLD+Y + G + DA+ VFD LE ++ VSWN+++  +A+    ++A++LF+ M   GF
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P+  ++  +  ACS TG LE+G +    M K   +        ++D+  + G +  A +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               +  +   + W +LL A   H
Sbjct: 319 IFDRLAKRDVVS-WNSLLTAYAQH 341



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 66/325 (20%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLL+MY K GS+ +A+KVF+++ ++D V+W ++++ Y+QH    +A+  F +M   G+
Sbjct: 98   GNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157

Query: 181  QPNEITFLCVINA--------CSHT---------------------------GLLEKGLY 255
             PNE T   VI A        C H                            GL++    
Sbjct: 158  SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217

Query: 256  YFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERFIKEMK--IQPTAAVWKALLGACRM 429
             F+ +   N   D++    I     R G  +  E F   ++   +P+   + +L GAC  
Sbjct: 218  VFDALESRN---DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 430  HKNMELGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARV------RKMM 573
               +E G +    + +     SG  ++      L ++YA +G ++DA ++      R ++
Sbjct: 275  TGFLEQGKWVHAYMIK-----SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329

Query: 574  S---------ESGIKKEPACSWVEIGNSV--------HLFVANDCKHPQIKEIHLTWDKI 702
            S         + G  KE A  W E    V         L V   C H  + +    + ++
Sbjct: 330  SWNSLLTAYAQHGFGKE-AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388

Query: 703  RDEIKKIGYVPDTSHVLWYVDELER 777
               +KK G VP+  H +  VD L R
Sbjct: 389  ---MKKDGIVPEAWHYVTVVDLLGR 410


>ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutrema salsugineum]
            gi|557113442|gb|ESQ53725.1| hypothetical protein
            EUTSA_v10027054mg [Eutrema salsugineum]
          Length = 638

 Score =  491 bits (1263), Expect = e-136
 Identities = 234/331 (70%), Positives = 276/331 (83%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTL+DMY K+GSI DA+K+FDRL K+DVVSWNS+LTAYAQHG GKEA+ LFEEMR  G 
Sbjct: 305  GNTLIDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVCLFEEMRRAGI 364

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
             PNEI+FL V+ ACSH+GLL++G +YF++M+K  + P+ +HYV IVDLLGR G L++A R
Sbjct: 365  PPNEISFLSVLTACSHSGLLDEGWHYFQLMKKDGIIPEASHYVTIVDLLGRAGALDRALR 424

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAA+WKALL ACRMHKN ELG YAAE VFELDP D GPH++L NIYAS GR
Sbjct: 425  FIREMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 484

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAARVRK M E G+KKEPACSWVEI N++H+FVAND  HPQ +EI   W++I  +IK+
Sbjct: 485  WNDAARVRKKMKEFGVKKEPACSWVEIENAIHMFVANDECHPQREEIGRKWEEIYAKIKE 544

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHV+ +VD+ ERE  LQYHSEK+ALAFALLNTP  S I IKKNIRVCGDCHSA
Sbjct: 545  IGYVPDTSHVVVHVDQQEREVNLQYHSEKIALAFALLNTPPESTIHIKKNIRVCGDCHSA 604

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
             K  SK+  REII+RDTNRFHHFR+GSCSCR
Sbjct: 605  IKLASKVVEREIIVRDTNRFHHFRDGSCSCR 635



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 83/325 (25%), Positives = 145/325 (44%), Gaps = 67/325 (20%)
 Frame = +1

Query: 4    NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
            NTLL+MY K GS+ DA+KVFD++ + D V+W ++++ Y+QHG  ++A+ LF +M   GF 
Sbjct: 104  NTLLNMYAKCGSLEDARKVFDQMPQLDFVTWTTLISGYSQHGRPRDALLLFNQMLRHGFC 163

Query: 184  PNEITFLCVINA--------CSHT---------------------------GLLEKGLYY 258
            PNE T   V+ A        C H                            GL++     
Sbjct: 164  PNEFTLSSVVKAAAAEPRGCCGHQLHCFCLKCGFDLNVHVGSSLLDLYTRYGLMDDAQLV 223

Query: 259  FEMMRKYNLEPDITHYVAIVDLLGRGGELEKA----ERFIKEMKIQPTAAVWKALLGACR 426
            F+ +   N   D++ + A++    R  + EKA    +R ++E   +P+   + +L G C 
Sbjct: 224  FDALENRN---DVS-WNALIAGYARRCDTEKALELFQRMLRE-GFRPSHFSYSSLFGTCS 278

Query: 427  MHKNMELGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARV------RKM 570
                +E G +    + +     SG  ++      L ++YA +G ++DA ++      R +
Sbjct: 279  STGFLEQGKWVHAYMIK-----SGEKLVAFAGNTLIDMYAKSGSIHDARKIFDRLAKRDV 333

Query: 571  MS---------ESGIKKEPACSWVEIGNS-------VHLFVANDCKHPQIKEIHLTWDKI 702
            +S         + G  KE  C + E+  +         L V   C H  + +    + ++
Sbjct: 334  VSWNSLLTAYAQHGFGKEAVCLFEEMRRAGIPPNEISFLSVLTACSHSGLLDEGWHYFQL 393

Query: 703  RDEIKKIGYVPDTSHVLWYVDELER 777
               +KK G +P+ SH +  VD L R
Sbjct: 394  ---MKKDGIIPEASHYVTIVDLLGR 415



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 43/144 (29%), Positives = 78/144 (54%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++LLD+Y + G + DA+ VFD LE ++ VSWN+++  YA+    ++A++LF+ M   GF
Sbjct: 204 GSSLLDLYTRYGLMDDAQLVFDALENRNDVSWNALIAGYARRCDTEKALELFQRMLREGF 263

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P+  ++  +   CS TG LE+G +    M K   +        ++D+  + G +  A +
Sbjct: 264 RPSHFSYSSLFGTCSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLIDMYAKSGSIHDARK 323

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               +  +   + W +LL A   H
Sbjct: 324 IFDRLAKRDVVS-WNSLLTAYAQH 346


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  491 bits (1263), Expect = e-136
 Identities = 234/307 (76%), Positives = 267/307 (86%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY KAGSI DAK+VFDRL K DVVSWN+MLT  AQHG GKE +D FE+M  +G 
Sbjct: 328  GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FLCV+ ACSH+GLL++GLYYFE+M+KY +EPD+ HYV  VDLLGR G L++AER
Sbjct: 388  EPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKNMELG+YAAER FELDPHDSGP MLLSNIYASAGR
Sbjct: 448  FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
              D A+VRKMM ESG+KK+PACSWVEI N+VHLFVAND  HPQIKEI   W++I  +IK+
Sbjct: 508  WRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKE 567

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL +VD+ EREE+LQYHSEKLALAFALLNTP GSPI IKKNIRVCGDCH+A
Sbjct: 568  IGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAA 627

Query: 901  FKFVSKL 921
             KFVSK+
Sbjct: 628  IKFVSKI 634



 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 4/200 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N +++MY K G + DA+++FD +  KD+V+W +++  ++Q+   ++A+ LF +M  LG Q
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PN  T   ++ A      L+ G        KY  +  +    A+VD+  R G ++ A+  
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246

Query: 364 IKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY---AS 531
              M  +   + W AL+     H     G +A   ++++   +  P H   S+++   AS
Sbjct: 247 FDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302

Query: 532 AGRLNDAARVRKMMSESGIK 591
            G L     V   M +SG+K
Sbjct: 303 IGALEQGKWVHAHMIKSGLK 322



 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 43/144 (29%), Positives = 76/144 (52%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ L+DMY + G +  A+  FD +  K  VSWN++++ +A+ G G+ A+ L  +M+   F
Sbjct: 227 GSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           QP   T+  V +AC+  G LE+G +    M K  L+        ++D+  + G ++ A+R
Sbjct: 287 QPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               + ++P    W  +L  C  H
Sbjct: 347 VFDRL-VKPDVVSWNTMLTGCAQH 369


>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Citrus sinensis]
          Length = 670

 Score =  488 bits (1255), Expect = e-135
 Identities = 232/330 (70%), Positives = 273/330 (82%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTL+DMY K+GSI DA+KVF+RL K+DVVSWNSMLT  AQHG GK  +  FE+M   G 
Sbjct: 337  GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 396

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
             PN++TFLCV+ ACSH GLL++G  YF +M+K+ +EP+  HYV  VDLLGR G L++A +
Sbjct: 397  APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 456

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAAVW ALLGACRMHKN+ELG YAAE +FELDPHDSGPH+LL+NIYASAGR
Sbjct: 457  FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAEHIFELDPHDSGPHILLANIYASAGR 516

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
            LNDAAR RKMM ESG+KKEPACSWVE  N+VH+FVAND  HPQ   IH  W +I ++IK+
Sbjct: 517  LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 576

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPD+SHVL Y D+ ERE +LQ HSEKLALAFAL++TP GS I IKKNIRVCGDCHSA
Sbjct: 577  IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 636

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
            FKF SK+  REII+RDTNRFHHFR+G CSC
Sbjct: 637  FKFASKVVEREIIVRDTNRFHHFRDGFCSC 666



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++LLDMY +   + DA  +F  LE K+ VSWN+++  +A+   G++A+  F EM   GF
Sbjct: 236 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 295

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P   ++  V  A + TG LE+G +    + K   +        +VD+  + G +E AE+
Sbjct: 296 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 355

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFE--LDPHDSGPHMLLSNIYASA 534
               + ++     W ++L  C  H   +  +   E++    + P+     + +    + A
Sbjct: 356 VFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV-TFLCVLTACSHA 413

Query: 535 GRLNDAARVRKMMSESGIKKEPA 603
           G L++      +M + G++ E A
Sbjct: 414 GLLDEGQGYFALMKKHGVEPEEA 436



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NT+L+ Y K G + +A+K+FD +  KD+V+W ++++ Y+Q+   + AI LF +M  LG +
Sbjct: 135 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 194

Query: 184 PNEITFLCVINACSHTGLLEK-GLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           PN+ T   V+ A       +K G        KY  + ++    +++D+  R  +++ A  
Sbjct: 195 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 254

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGP-HMLLSNIY---A 528
               ++ +   + W AL+     H     G  A     E+      P H   S+++   A
Sbjct: 255 LFTALESKNEVS-WNALIAG---HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 310

Query: 529 SAGRLNDAARVRKMMSESG 585
           S G L     V   + +SG
Sbjct: 311 STGSLEQGKWVHAHVIKSG 329


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331463|gb|EFH61882.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 624

 Score =  484 bits (1247), Expect = e-134
 Identities = 229/331 (69%), Positives = 275/331 (83%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+K+FDRL K+DVVSWNS+LTAYAQHG G EA+  FEEMR  G 
Sbjct: 291  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGI 350

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FL V+ ACSH+GLL++G +Y+E+M+K  +  +  HYV IVDLLGR G+L +A R
Sbjct: 351  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALR 410

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAA+WKALL ACRMHKN ELG YAAE VFELDP D GPH++L NIYAS GR
Sbjct: 411  FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 470

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAARVRK M ESG+KKEPACSWVEI N++H+FVAND +HPQ +EI   W+++  +IK+
Sbjct: 471  WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 530

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            +GYVPDTSHV+ +VD+ ERE  LQYHSEK+ALAFALLNTP GS I IKKNIRVCGDCHSA
Sbjct: 531  LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSA 590

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
             K  SK   REII+RDTNRFHHF++G+CSC+
Sbjct: 591  IKLASKAVGREIIVRDTNRFHHFKDGACSCK 621



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTLL+MY K GS+ +A+KVFD++ ++D V+W ++++ Y+QH    +A+ LF +M   GF 
Sbjct: 90  NTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFS 149

Query: 184 PNEITFLCVINACS--HTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
           PNE T   VI A +    G     L+ F +  K   + ++    A++DL  R G ++ A+
Sbjct: 150 PNEFTLSSVIKAAAAERRGCCGHQLHGFCV--KCGFDSNVHVGSALLDLYTRYGLMDDAQ 207

Query: 358 RFIKEMKIQPTAAVWKALLGA----CRMHKNMEL 447
                ++ +   + W AL+      C   K +EL
Sbjct: 208 LVFDALESRNDVS-WNALIAGHARRCGTEKALEL 240



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 43/144 (29%), Positives = 78/144 (54%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ LLD+Y + G + DA+ VFD LE ++ VSWN+++  +A+    ++A++LF+ M   GF
Sbjct: 190 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGF 249

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P+  ++  +  ACS TG LE+G +    M K   +        ++D+  + G +  A +
Sbjct: 250 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 309

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               +  +   + W +LL A   H
Sbjct: 310 IFDRLAKRDVVS-WNSLLTAYAQH 332


>ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332643322|gb|AEE76843.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  481 bits (1237), Expect = e-133
 Identities = 226/327 (69%), Positives = 274/327 (83%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+K+FDRL K+DVVSWNS+LTAYAQHG GKEA+  FEEMR +G 
Sbjct: 300  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FL V+ ACSH+GLL++G +Y+E+M+K  + P+  HYV +VDLLGR G+L +A R
Sbjct: 360  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAA+WKALL ACRMHKN ELG YAAE VFELDP D GPH++L NIYAS GR
Sbjct: 420  FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAARVRK M ESG+KKEPACSWVEI N++H+FVAND +HPQ +EI   W+++  +IK+
Sbjct: 480  WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            +GYVPDTSHV+ +VD+ ERE  LQYHSEK+ALAFALLNTP GS I IKKNIRVCGDCH+A
Sbjct: 540  LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGS 981
             K  SK+  REII+RDTNRFHHF++ S
Sbjct: 600  IKLASKVVGREIIVRDTNRFHHFKDAS 626



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 43/144 (29%), Positives = 78/144 (54%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ LLD+Y + G + DA+ VFD LE ++ VSWN+++  +A+    ++A++LF+ M   GF
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P+  ++  +  ACS TG LE+G +    M K   +        ++D+  + G +  A +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 361 FIKEMKIQPTAAVWKALLGACRMH 432
               +  +   + W +LL A   H
Sbjct: 319 IFDRLAKRDVVS-WNSLLTAYAQH 341



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 66/325 (20%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLL+MY K GS+ +A+KVF+++ ++D V+W ++++ Y+QH    +A+  F +M   G+
Sbjct: 98   GNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157

Query: 181  QPNEITFLCVINA--------CSHT---------------------------GLLEKGLY 255
             PNE T   VI A        C H                            GL++    
Sbjct: 158  SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217

Query: 256  YFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERFIKEMK--IQPTAAVWKALLGACRM 429
             F+ +   N   D++    I     R G  +  E F   ++   +P+   + +L GAC  
Sbjct: 218  VFDALESRN---DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 430  HKNMELGIYAAERVFELDPHDSGPHML------LSNIYASAGRLNDAARV------RKMM 573
               +E G +    + +     SG  ++      L ++YA +G ++DA ++      R ++
Sbjct: 275  TGFLEQGKWVHAYMIK-----SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329

Query: 574  S---------ESGIKKEPACSWVEIGNSV--------HLFVANDCKHPQIKEIHLTWDKI 702
            S         + G  KE A  W E    V         L V   C H  + +    + ++
Sbjct: 330  SWNSLLTAYAQHGFGKE-AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388

Query: 703  RDEIKKIGYVPDTSHVLWYVDELER 777
               +KK G VP+  H +  VD L R
Sbjct: 389  ---MKKDGIVPEAWHYVTVVDLLGR 410


>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
            gi|482565379|gb|EOA29568.1| hypothetical protein
            CARUB_v10016279mg [Capsella rubella]
          Length = 717

 Score =  480 bits (1236), Expect = e-133
 Identities = 228/327 (69%), Positives = 272/327 (83%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLLDMY K+GSI DA+K+FDRL K+DVVSWNS+LTAYAQHG G EA+  FEEMR  G 
Sbjct: 309  GNTLLDMYAKSGSIDDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEMRRGGI 368

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PNEI+FL V+ ACSH+GLL++G  YFE+M+K  + P+  HYV +VDLLGR G+L +A R
Sbjct: 369  RPNEISFLSVLTACSHSGLLDEGWQYFELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 428

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PTAA+WKALL ACRMHKN ELG YAAE VF+LDP D GPH++L NIYAS GR
Sbjct: 429  FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFKLDPDDPGPHVILYNIYASGGR 488

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
             NDAARVRKMM ESG+KKEPACSWVEI N++H+FVAND +HPQ +EI L W+++  +IK+
Sbjct: 489  WNDAARVRKMMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIALKWEEVYAKIKE 548

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            +GYVPDTSHV+ +VD+ ERE  LQYHSEK+ALAFALLNTP GS I IKKNIRVCGDCHSA
Sbjct: 549  LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSA 608

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGS 981
             K  SK   REII+RDTNRFHHF++ S
Sbjct: 609  IKLASKAVGREIIVRDTNRFHHFKDES 635



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           NTLL+MY K GS+ +A+KVFD++  +D V+W ++++ Y+QHG  ++A+ LF +M   GF 
Sbjct: 108 NTLLNMYAKCGSLEEARKVFDQMPHRDFVTWTTLISGYSQHGRSRDALLLFNQMVGFGFS 167

Query: 184 PNEITFLCVINACS--HTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
           PNE T   VI A +    G +   L+ F +  K   + ++    A++DL  R G ++ A+
Sbjct: 168 PNEFTLSSVIKAAAAETRGCIGHQLHGFCI--KCGFDSNVHVGSALLDLYTRYGLMDDAQ 225

Query: 358 RFIKEMKIQPTAAVWKALLGA----CRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIY 525
                ++ +   + W AL+      C   K +EL  +     F    H S  +  L    
Sbjct: 226 LVFDALESRNDVS-WNALIAGHARRCGTEKALELFQHMLRDGFR-PSHFS--YASLFGAC 281

Query: 526 ASAGRLNDAARVRKMMSESGIK 591
           +S G L     V   M +SG K
Sbjct: 282 SSTGFLEQGKWVHAYMIKSGEK 303



 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G+ LLD+Y + G + DA+ VFD LE ++ VSWN+++  +A+    ++A++LF+ M   GF
Sbjct: 208 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQHMLRDGF 267

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
           +P+  ++  +  ACS TG LE+G +    M K   +        ++D+  + G ++ A +
Sbjct: 268 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIDDARK 327

Query: 361 FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFE--LDPHDSGPHMLLSNIYASA 534
               +  +   + W +LL A   H      +Y  E +    + P++    + +    + +
Sbjct: 328 IFDRLAKRDVVS-WNSLLTAYAQHGFGNEAVYWFEEMRRGGIRPNEIS-FLSVLTACSHS 385

Query: 535 GRLNDAARVRKMMSESGIKKE 597
           G L++  +  ++M + GI  E
Sbjct: 386 GLLDEGWQYFELMKKDGIVPE 406


>ref|XP_004498496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Cicer arietinum]
          Length = 660

 Score =  476 bits (1226), Expect = e-132
 Identities = 230/332 (69%), Positives = 271/332 (81%), Gaps = 1/332 (0%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRS-LG 177
            GNTLL MY K+G+I DAKKVFDRL K DVVS NSML  YAQHG GKEA+DLFEEM   +G
Sbjct: 326  GNTLLHMYAKSGNIWDAKKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVDLFEEMLLWVG 385

Query: 178  FQPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAE 357
             +PN+ITFL V+ ACSH GLL++G +YFE+M+KY +EP ++HY  +VDLLGR G L++A 
Sbjct: 386  IEPNDITFLSVLTACSHAGLLDEGKHYFELMKKYGIEPKVSHYTTVVDLLGRAGLLDQAR 445

Query: 358  RFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAG 537
             FI+EM I+PTA +W ALLGA RMHKNME+G YAAE+V ELDP  SG H LLSNIYASAG
Sbjct: 446  SFIEEMPIEPTATIWGALLGASRMHKNMEIGAYAAEKVLELDPFYSGTHTLLSNIYASAG 505

Query: 538  RLNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIK 717
            R  D A+VRKMM +SG+KKEPACSWVEI N+VH+FVAND  HPQ  ++H  W+K+  +IK
Sbjct: 506  RWKDVAKVRKMMKDSGLKKEPACSWVEIENAVHVFVANDIAHPQKDKVHEMWEKLNQKIK 565

Query: 718  KIGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHS 897
            +IGYVPDTSHVL YVD+ E+E  LQYHSEKLALAFALLNT +GS I I KNIRVCGDCHS
Sbjct: 566  EIGYVPDTSHVLLYVDQQEKELNLQYHSEKLALAFALLNTSQGSTIRIMKNIRVCGDCHS 625

Query: 898  AFKFVSKLENREIILRDTNRFHHFRNGSCSCR 993
            A K+VS +  REII+RDTNRFHHFR+G CSCR
Sbjct: 626  AIKYVSLVVKREIIVRDTNRFHHFRDGLCSCR 657



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
 Frame = +1

Query: 4   NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
           N++L MY K G +  A++VFD +  KDVV+W SM+T Y+Q+     A+ LF EM   G +
Sbjct: 125 NSILFMYAKCGCLELARQVFDEMGLKDVVTWTSMITGYSQNECASSALVLFPEMIRDGSR 184

Query: 184 PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAERF 363
           PNE T   ++      G    G        KY  + ++    ++VD+  R G L +A+  
Sbjct: 185 PNEFTLSSLVKCSGFLGSCVDGKQIHGCCWKYGFQTNVYVGSSLVDMYARCGYLREAQLV 244

Query: 364 IKEMKIQPTAAVWKALL-GACRMHKNME-LGIYAAERVFELDPHDSGPHMLLSNIYASAG 537
             E++ +   + W AL+ G  R  +  E L ++   +  +    D     LL +  +S G
Sbjct: 245 FNELESKNEVS-WNALISGYARKGQGEEALALFVTMQREDYGATDFTYSALLCS-SSSTG 302

Query: 538 RLNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWD--KIRDE 711
            L     +   M +SG K         +G     +V N   H   K  ++ WD  K+ D 
Sbjct: 303 SLEQGKWLHAHMMKSGRKL--------VG-----YVGNTLLHMYAKSGNI-WDAKKVFDR 348

Query: 712 IKKIGYVPDTSHVLWYVDELEREERLQYHSEKL 810
           + K+  V   S ++ Y      +E +    E L
Sbjct: 349 LVKVDVVSCNSMLIGYAQHGFGKEAVDLFEEML 381



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++L+DMY + G + +A+ VF+ LE K+ VSWN++++ YA+ G G+EA+ LF  M+   +
Sbjct: 225 GSSLVDMYARCGYLREAQLVFNELESKNEVSWNALISGYARKGQGEEALALFVTMQREDY 284

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRK 276
              + T+  ++ + S TG LE+G +    M K
Sbjct: 285 GATDFTYSALLCSSSSTGSLEQGKWLHAHMMK 316


>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Glycine max]
          Length = 647

 Score =  461 bits (1187), Expect = e-127
 Identities = 221/330 (66%), Positives = 265/330 (80%)
 Frame = +1

Query: 1    GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
            GNTLL MY K+GSI DA+KVFD+L K DVVS NSML  YAQHG GKEA   F+EM   G 
Sbjct: 314  GNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGI 373

Query: 181  QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGELEKAER 360
            +PN+ITFL V+ ACSH  LL++G +YF +MRKYN+EP ++HY  IVDLLGR G L++A+ 
Sbjct: 374  EPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKS 433

Query: 361  FIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERVFELDPHDSGPHMLLSNIYASAGR 540
            FI+EM I+PT A+W ALLGA +MHKN E+G YAA+RVFELDP   G H LL+NIYASAGR
Sbjct: 434  FIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGR 493

Query: 541  LNDAARVRKMMSESGIKKEPACSWVEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKK 720
              D A+VRK+M +SG+KKEPACSWVE+ NSVH+FVAND  HPQ ++IH  W+K+  +IK+
Sbjct: 494  WEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKE 553

Query: 721  IGYVPDTSHVLWYVDELEREERLQYHSEKLALAFALLNTPKGSPISIKKNIRVCGDCHSA 900
            IGYVPDTSHVL +VD+ E+E  LQYHSEKLAL+FALLNTP GS I I KNIRVCGDCHSA
Sbjct: 554  IGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSA 613

Query: 901  FKFVSKLENREIILRDTNRFHHFRNGSCSC 990
             K+VS +  REII+RDTNRFHHF +G CSC
Sbjct: 614  IKYVSLVVKREIIVRDTNRFHHFCDGFCSC 643



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   GNTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGF 180
           G++L+DMY + G + +A  VFD+L  K+ VSWN+++  YA+ G G+EA+ LF  M+  G+
Sbjct: 213 GSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGY 272

Query: 181 QPNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYV--AIVDLLGRGGELEKA 354
           +P E T+  ++++CS  G LE+G +    + K + +  +  YV   ++ +  + G +  A
Sbjct: 273 RPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK--LVGYVGNTLLHMYAKSGSIRDA 330

Query: 355 ERFIKEMKIQPTAAVWKALLGACRMHKNMELGIYAAERV-FELDPHD 492
           E+   ++      +    L+G  +     E      E + F ++P+D
Sbjct: 331 EKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPND 377



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 57/315 (18%)
 Frame = +1

Query: 4    NTLLDMYGKAGSITDAKKVFDRLEKKDVVSWNSMLTAYAQHGHGKEAIDLFEEMRSLGFQ 183
            N+LL MY + GS+  A+++FD +  +D+VSW SM+T YAQ+    +A+ LF  M S G +
Sbjct: 113  NSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172

Query: 184  PNEITFLCVINACSHTGLLEKGLYYFEMMRKYNLEPDITHYVAIVDLLGRGGEL------ 345
            PNE T   ++  C +      G        KY    ++    ++VD+  R G L      
Sbjct: 173  PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232

Query: 346  --------------------------EKAERFIKEMK--IQPTAAVWKALLGACRMHKNM 441
                                      E    F++  +   +PT   + ALL +C     +
Sbjct: 233  FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292

Query: 442  ELGIYAAERVFELDPHDSG-PHMLLSNIYASAGRLNDAARVRKMM--------------- 573
            E G +    + +      G     L ++YA +G + DA +V   +               
Sbjct: 293  EQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGY 352

Query: 574  SESGIKKEPACSW-------VEIGNSVHLFVANDCKHPQIKEIHLTWDKIRDEIKKIGYV 732
            ++ G+ KE A  +       +E  +   L V   C H ++ +    +  +   ++K    
Sbjct: 353  AQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGL---MRKYNIE 409

Query: 733  PDTSHVLWYVDELER 777
            P  SH    VD L R
Sbjct: 410  PKVSHYATIVDLLGR 424