BLASTX nr result
ID: Mentha22_contig00043109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00043109
(480 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 84 2e-25
emb|CAN60277.1| hypothetical protein VITISV_028254 [Vitis vinifera] 71 4e-20
emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera] 68 1e-17
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] 65 5e-16
emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera] 60 5e-16
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 75 7e-15
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 64 6e-14
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] 82 1e-13
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 69 1e-13
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 80 2e-13
emb|CBI36090.3| unnamed protein product [Vitis vinifera] 80 3e-13
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 79 9e-13
emb|CAN77528.1| hypothetical protein VITISV_041424 [Vitis vinifera] 63 3e-12
emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] 76 6e-12
emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera] 53 6e-12
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 61 8e-11
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 53 1e-09
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 52 2e-09
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 52 2e-09
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 52 3e-09
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 84.0 bits (206), Expect(2) = 2e-25
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A LAEAF C++SN + SDW+ DTGAS+HMT PS LD EPY G D V+VGN SL I
Sbjct: 259 AQLAEAFTTTCSLSNGSESDWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPI 318
Query: 304 SHVGLLAN 327
+H G L++
Sbjct: 319 THTGTLSS 326
Score = 57.8 bits (138), Expect(2) = 2e-25
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
ISKLT D ++V F+ D F +QN +T +AKG+R GLYVLE+GH+A + +
Sbjct: 348 ISKLTSDFPLSVTFSHDNFVVQNRITGMAVAKGKRAGGLYVLERGHSAFASVL 400
>emb|CAN60277.1| hypothetical protein VITISV_028254 [Vitis vinifera]
Length = 372
Score = 71.2 bits (173), Expect(2) = 4e-20
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
ANLAEAF A C ++ SD Y+DTGA +HMT SHLD Y G D VV+GN SL I
Sbjct: 135 ANLAEAFKASCFLNGPEPSDXYLDTGALAHMTPDLSHLDQASNYMGKDRVVIGNGVSLPI 194
Query: 304 SHVGLLA 324
+H G ++
Sbjct: 195 THTGTIS 201
Score = 52.4 bits (124), Expect(2) = 4e-20
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALV 467
ISKLTFD + V FT + F+IQN T ++ G+R++GLYVLE G++ +
Sbjct: 224 ISKLTFDFPLVVTFTNNFFSIQNRQTGRVVETGKRDSGLYVLECGNSXFI 273
>emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera]
Length = 430
Score = 68.2 bits (165), Expect(2) = 1e-17
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = +1
Query: 46 KKCTHFFRIKHLILSYNNIIRFRVLHANLAEAFIAGCNVSNENSSDWYIDTGASSHMTST 225
K+C +F ++K + ANLAEAF + C++ + N S+W+ D+GA+SHMTS
Sbjct: 270 KRCWNFLKLK------------KKQSANLAEAF-STCSIQDFNDSEWFPDSGATSHMTSD 316
Query: 226 PSHLDSYEPYSGNDHVVVGNRNSLSISHVGLLAN 327
++ Y GN+ V+VGN SL+ISH G +++
Sbjct: 317 TEGVNQPAVYYGNERVMVGNGQSLAISHTGSISS 350
Score = 47.4 bits (111), Expect(2) = 1e-17
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVA 470
IS+LT D + V F+ F IQ+ +T+ ++ GR ENGLYVL++ H ALV+
Sbjct: 375 ISQLTKDNNCYVTFSSSGFTIQDRVTRVVLGVGRCENGLYVLDRRHHALVS 425
>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
Length = 1212
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 36/94 (38%), Positives = 54/94 (57%)
Frame = +1
Query: 46 KKCTHFFRIKHLILSYNNIIRFRVLHANLAEAFIAGCNVSNENSSDWYIDTGASSHMTST 225
K+C F ++K + AN+AEAF A C++ + N S+W+ D+GA SHMTS
Sbjct: 268 KRCWSFLKLK------------KKQSANIAEAFSA-CSIQDLNDSEWFPDSGAMSHMTSD 314
Query: 226 PSHLDSYEPYSGNDHVVVGNRNSLSISHVGLLAN 327
+D YS N+ V+VGN SL+ISH +++
Sbjct: 315 TEVVDQPTLYSSNERVMVGNGXSLAISHTSSISS 348
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVA 470
IS+LT D + V F+ F IQ+ +T+ ++ GR ENGLYVL+ H AL++
Sbjct: 373 ISQLTKDNNCLVTFSSFGFTIQDQVTRTVLGVGRCENGLYVLDHCHHALMS 423
>emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera]
Length = 540
Score = 60.5 bits (145), Expect(2) = 5e-16
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +1
Query: 154 CNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSISHVGLLA 324
C++ + N S+WY D+ A+SH+T+ +D YSGN+ V+VGN SLSISH G L+
Sbjct: 307 CSIPDSNDSEWYPDSCATSHLTNDSESVDVPVVYSGNERVMVGNGQSLSISHTGSLS 363
Score = 49.3 bits (116), Expect(2) = 5e-16
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
IS+LT D + V+F+ F IQ+ +T+ + GR ENGLYVL+Q H ALV+ +
Sbjct: 389 ISQLTKDNNYCVIFSPSGFTIQDRVTRVALGVGRCENGLYVLDQNHHALVSIV 441
>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 75.5 bits (184), Expect(2) = 7e-15
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A+LAEAF C++S ++DW++DTGAS+HMT+ PS LD + Y G D V+VGN SL I
Sbjct: 291 AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLPI 350
Query: 304 SHVG 315
+H G
Sbjct: 351 THTG 354
Score = 30.4 bits (67), Expect(2) = 7e-15
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 393 TKEIMAKGRRENGLYVLEQGHAALVAAI 476
T ++A G+R+ GLYVLE+ ++A ++ +
Sbjct: 353 TGRVVATGKRDGGLYVLERDNSAFISVL 380
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 63.9 bits (154), Expect(2) = 6e-14
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +1
Query: 121 HANLAEAF---IAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRN 291
HA +E F A VS++ S+ W D+GA+SH+T++ S L S +PYSG D V+VGN +
Sbjct: 269 HAFQSEDFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVGNSD 328
Query: 292 SLSISHVG 315
L I+H+G
Sbjct: 329 FLPITHIG 336
Score = 38.9 bits (89), Expect(2) = 6e-14
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLE 446
+SKLT D + F D +++ LTK+++ KG R N LY+LE
Sbjct: 365 VSKLTSDYPCVIEFDSDGVIVKDKLTKQLLTKGTRHNDLYLLE 407
>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
Length = 1095
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +1
Query: 130 LAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSISH 309
LAEAF C++SN SDW+ DTGAS+HMT PS LD EPY G D V+VGN SL I+H
Sbjct: 289 LAEAFTTACSLSNGLESDWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPITH 348
Query: 310 VGLLAN 327
G L++
Sbjct: 349 TGXLSS 354
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 68.6 bits (166), Expect(2) = 1e-13
Identities = 37/94 (39%), Positives = 58/94 (61%)
Frame = +1
Query: 46 KKCTHFFRIKHLILSYNNIIRFRVLHANLAEAFIAGCNVSNENSSDWYIDTGASSHMTST 225
K+C +F ++K + ANLAEAF A ++ + N S+W+ D+GA+SHMTS
Sbjct: 400 KRCWNFLKLK------------KKQSANLAEAFSA-YSIQDFNDSEWFPDSGATSHMTSD 446
Query: 226 PSHLDSYEPYSGNDHVVVGNRNSLSISHVGLLAN 327
++ + YSGN+ V+VGN SL+ISH G +++
Sbjct: 447 TEGVNQPDVYSGNERVMVGNGQSLAISHTGSISS 480
Score = 33.1 bits (74), Expect(2) = 1e-13
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 384 NHLTKEIMAKGRRENGLYVLEQGHAALVA 470
+ +T+ ++ GR ENGLYVL++ H ALV+
Sbjct: 492 DRVTRVVLGVGRCENGLYVLDRRHHALVS 520
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A+LAEAF C++S ++DW++DTGAS+HMT+ PS LD + Y G D V+VGN SL I
Sbjct: 269 AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLPI 328
Query: 304 SHVGLLA---N*HLTCLLMFYSLVTCLL 378
+H G L+ N HL +L+ L LL
Sbjct: 329 THTGTLSPVPNIHLLDVLVVXHLTKNLL 356
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
ISKLT D ++V FT ++F +QN T +A G+R+ GLYVLE+G++A ++ +
Sbjct: 358 ISKLTSDFPLSVTFTNNLFTVQNRQTGRXVATGKRDGGLYVLERGNSAFISVL 410
>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
Length = 1273
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A+LAEAF C++S ++DW++DTGAS+HMT+ PS LD + Y G D V+VGN SL I
Sbjct: 853 AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLPI 912
Query: 304 SHVGLLA---N*HLTCLLMFYSLVTCLL 378
+H G L+ N HL +L+ L+ LL
Sbjct: 913 THTGTLSSVPNIHLLDVLVVPHLIKNLL 940
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
ISKLT D ++V FT ++F +QN T ++A G+R+ GLYVLE+G++A ++ +
Sbjct: 942 ISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATGKRDGGLYVLERGNSAFISVL 994
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A+LAEAF C++S ++DW++DTGAS+HMT+ PS LD + Y G D V+VGN SL I
Sbjct: 277 AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGVSLPI 336
Query: 304 SHVGLLA---N*HLTCLLMFYSLVTCLL 378
+H G L+ N HL +L+ L LL
Sbjct: 337 THTGTLSPVPNIHLLDVLVVPHLTKNLL 364
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
ISKLT D ++V FT ++F +QN T ++A G+R+ GLYVLE G++A ++ +
Sbjct: 366 ISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATGKRDGGLYVLECGNSAFISVL 418
>emb|CAN77528.1| hypothetical protein VITISV_041424 [Vitis vinifera]
Length = 705
Score = 62.8 bits (151), Expect(2) = 3e-12
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 124 ANLAE---AFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNS 294
ANLAE AF A C+++ SDWY+D G +HMT SHLD Y+G D VVV N S
Sbjct: 172 ANLAEPFKAFKAFCSLNGPEPSDWYLDIGILAHMTPDLSHLDQASNYTGKDRVVVRNGAS 231
Query: 295 LSISHVGLLA 324
L I+H ++
Sbjct: 232 LPITHTSTIS 241
Score = 34.3 bits (77), Expect(2) = 3e-12
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 351 VLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
+ FT + + N T ++A G+R+ GLYVLE+ + A ++ +
Sbjct: 240 ISFTLSLELLDNRQTGRVVATGKRDGGLYVLERRNFAFISVL 281
>emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]
Length = 787
Score = 75.9 bits (185), Expect = 6e-12
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +1
Query: 124 ANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSI 303
A+LAEAF C++S +++W++DTGAS+HMT+ PS LD + Y G D V+VGN SL I
Sbjct: 291 AHLAEAFNTSCSLSRPKAANWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLPI 350
Query: 304 SHVGLLA---N*HLTCLLM 351
+H G L+ N HL +L+
Sbjct: 351 THTGTLSPVPNIHLLDVLV 369
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVAAI 476
ISKLT D ++V FT ++F +QN T ++A G+R+ GLYVLE+G++A ++ +
Sbjct: 380 ISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATGKRDGGLYVLERGNSAFISVL 432
>emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera]
Length = 809
Score = 53.1 bits (126), Expect(2) = 6e-12
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 172 NSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSISHVGLLAN 327
N S+W+ ++GA+SHMTS +D Y GN+ V+V N SL+ISH G +++
Sbjct: 85 NDSEWFXBSGATSHMTSDTKVVDQPALYXGNERVMVRNGQSLAISHTGSISS 136
Score = 42.7 bits (99), Expect(2) = 6e-12
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQGHAALVA 470
IS+LT D + V F+ F IQ+ +T+ ++ R ENGLYVL++ H AL++
Sbjct: 161 ISQLTKDNNCLVTFSSSGFTIQDQVTRTVLGVRRCENGLYVLDRYHHALMS 211
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 61.2 bits (147), Expect(2) = 8e-11
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = +1
Query: 91 YNNIIRFRVLHANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDH 270
++N + +H LA ++ ++ + +W+ DTGAS+H+T+TP HL + +PY G+D
Sbjct: 302 FDNSYQLDEMHNALAAMRVS--DMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDS 359
Query: 271 VVVGNRNSLSISHVG 315
V+VGN L I+H G
Sbjct: 360 VMVGNGEYLPITHTG 374
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLEQ 449
+SK T D F D I + TK+++ +GR GLY +++
Sbjct: 403 VSKFTTDYPCGFDFDADNVCIYDKATKKVLLQGRNTKGLYSIKE 446
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +1
Query: 67 RIKHLILSYNNIIRFRVLHANLAEAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSY 246
R H L N + A+AF + VS+ + +W D+ A++H+TS+ ++L +
Sbjct: 287 RTGHTALKCYNRFDHNYQSVDTAQAF-SSLRVSDSSGKEWVPDSAATAHVTSSTNNLQAA 345
Query: 247 EPYSGNDHVVVGNRNSLSISHVG 315
PY+G+D V+VG+ L I+HVG
Sbjct: 346 SPYNGSDTVLVGDGAYLPITHVG 368
Score = 35.0 bits (79), Expect(2) = 1e-09
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLE 446
+SKL D V F + I + T+++++KG R NGLYVLE
Sbjct: 397 VSKLCDDYPCGVYFDANKVCIIDINTQKVVSKGPRSNGLYVLE 439
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = +1
Query: 118 LHANLAEAFIAGCNVSNEN---SSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNR 288
L +L AF A VS++N S +W D+ A++H+T+T L + + YSG+D V+VGN
Sbjct: 300 LPEDLPNAF-AAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNG 358
Query: 289 NSLSISHVGLL 321
+ L I+H+G +
Sbjct: 359 DFLPITHIGTI 369
Score = 34.7 bits (78), Expect(2) = 2e-09
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLE 446
+SKLT D + F D I++ T++++ +G + GLYVL+
Sbjct: 396 VSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLK 438
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 136 EAFIAGCNVSNENSSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNRNSLSISHVG 315
+AF A VS+E +WY D+ A++H+T++ S L + Y GND V+VG+ L I+HVG
Sbjct: 309 QAFSA-LRVSDETGKEWYPDSAATAHITASTSGLQNATTYEGNDAVLVGDGTYLPITHVG 367
Score = 34.7 bits (78), Expect(2) = 2e-09
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLE 446
+SKL D V F + I + T+++++KG R NGLY+LE
Sbjct: 396 VSKLCDDYPCGVYFDANKVCIIDLTTQKVVSKGPRNNGLYMLE 438
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 52.4 bits (124), Expect(2) = 3e-09
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = +1
Query: 118 LHANLAEAFIAGCNVSNEN---SSDWYIDTGASSHMTSTPSHLDSYEPYSGNDHVVVGNR 288
L +L AF A VS++N S +W D+ A++H+T+T L + + YSG+D V+VGN
Sbjct: 303 LPEDLPNAF-AAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNG 361
Query: 289 NSLSISHVGLL 321
+ L I+H+G +
Sbjct: 362 DFLPITHIGTI 372
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 318 ISKLTFDLSVNVLFTRDMFAIQNHLTKEIMAKGRRENGLYVLE 446
+SKLT D + F D I++ T++++ +G + GLYVL+
Sbjct: 399 VSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLK 441