BLASTX nr result
ID: Mentha22_contig00039755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00039755
(361 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 134 1e-29
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 128 9e-28
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 127 2e-27
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 127 2e-27
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 126 3e-27
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 123 3e-26
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 122 7e-26
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 122 7e-26
emb|CAA73803.1| reverse transcriptase [Allium cepa] 120 2e-25
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 120 3e-25
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 117 1e-24
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 117 2e-24
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 117 2e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 116 3e-24
gb|ABD96942.1| hypothetical protein [Cleome spinosa] 115 5e-24
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 115 6e-24
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 115 6e-24
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 115 6e-24
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 115 6e-24
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 115 6e-24
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 134 bits (338), Expect = 1e-29
Identities = 63/117 (53%), Positives = 88/117 (75%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPIAC +V+YKII+KILTSRM VL ++S QSAF+KGR I DN L+ EL+++Y RK
Sbjct: 197 FRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRK 256
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
GI+ RCMVKIDL+KAY+ + W F++ ++ L F FV W++ C+T+A+++ ING
Sbjct: 257 -GISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNING 312
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 128 bits (321), Expect = 9e-28
Identities = 59/117 (50%), Positives = 84/117 (71%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPIAC V+YKII+K+LT+RM ++ ++++ AQS FI GR I DN LA ELIR Y RK
Sbjct: 514 FRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRK 573
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
++ RC++K+D+RKAYD + W FL +LY F FV WI+ CV++ ++S+ +NG
Sbjct: 574 H-MSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNG 629
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 127 bits (319), Expect = 2e-27
Identities = 58/117 (49%), Positives = 82/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPI+C N+VYK+I+KI+ +R+ P+L+ +SP Q+AF+KGRS+ +N LA ELIR Y K
Sbjct: 3 FRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDY-NK 61
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S M+K+D+RKA+D + WDF+ +L F P FV WI C+TS FS+ +NG
Sbjct: 62 SSCLRSSMLKVDIRKAFDTVCWDFVIKILRAQGFPPLFVSWIQECITSPRFSVALNG 118
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 127 bits (319), Expect = 2e-27
Identities = 56/117 (47%), Positives = 86/117 (73%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ VL I+ QSAF+K R +++N LA EL++ Y K
Sbjct: 944 YRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYH-K 1002
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
I+ RC +KID+ KA+D + W FL++VL L+F P FV+W++ CVT+A+FS+ +NG
Sbjct: 1003 DTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCVTTASFSVQVNG 1059
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 126 bits (317), Expect = 3e-27
Identities = 54/117 (46%), Positives = 86/117 (73%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ +L + I+ QSAF+K R +++N LA EL++ Y +
Sbjct: 176 YRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKD 235
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S I+ARC +KID+ KA+D + W FL + L +NF P F++WI C+T+A+FS+ +NG
Sbjct: 236 S-ISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNG 291
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 123 bits (308), Expect = 3e-26
Identities = 56/116 (48%), Positives = 86/116 (74%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ VL + I+ QSAFIK R +++N LA EL++ Y +
Sbjct: 47 YRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKD 106
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITIN 350
S ++ RC +KID+ KA+D + W FLR+VL L+F FV+WI+ CVT+A+FS+ +N
Sbjct: 107 S-VSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVN 161
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 122 bits (305), Expect = 7e-26
Identities = 50/117 (42%), Positives = 89/117 (76%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RP++C NV+YKII+KI+ +R+ VL K I+ Q+AF+K R +++N LA EL++ Y ++
Sbjct: 56 YRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKE 115
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S +++RC +KID+ KA++ + W F+R++L ++F FV+WI+ C+++A+FS+ +NG
Sbjct: 116 S-VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNG 171
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 122 bits (305), Expect = 7e-26
Identities = 54/117 (46%), Positives = 85/117 (72%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ VL K I QSAF+K R +++N LA E+++ Y +
Sbjct: 417 YRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKD 476
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S +++RC +KID+ KA+D + W FL +VL +NF P F +WI C+T+A+FS+ +NG
Sbjct: 477 S-VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNG 532
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 120 bits (301), Expect = 2e-25
Identities = 56/117 (47%), Positives = 83/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPI+C N +YK I+K+L SR+ VL L+SP Q+A++ GR+I+D+ L+ ELI+ Y+RK
Sbjct: 3 FRPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRK 62
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S T R M+K+D+ KA+D + W+ + +L +NF P + WI C++S TFSI ING
Sbjct: 63 SA-TPRAMLKLDIMKAFDTLQWNSIVRILGYMNFPPHIIAWIYECISSPTFSINING 118
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 120 bits (300), Expect = 3e-25
Identities = 55/117 (47%), Positives = 82/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KIL +R+ +L I QSAF+K R +M+N LA EL++ Y ++
Sbjct: 826 YRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKE 885
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S +T RC +KID+ KA+D + W FL + L LNF F +WI C+++ATFS+ +NG
Sbjct: 886 S-VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNG 941
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 117 bits (294), Expect = 1e-24
Identities = 55/117 (47%), Positives = 80/117 (68%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPIAC + +YKII+KILT R+ V+ +++ AQ+ FI R I DN LA ELIR Y R+
Sbjct: 517 YRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRR 576
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
++ RC++K+D+RKAYD + W FL +L L F F+ WI+ CV + ++SI +NG
Sbjct: 577 H-VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNG 632
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 117 bits (293), Expect = 2e-24
Identities = 55/117 (47%), Positives = 82/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK I+KIL +R+ +L K I QSAF+K R +++N LA EL++ Y +
Sbjct: 250 YRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKD 309
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S I+ RC +KID+ KA+D + W FL VL +NF F++WI C+++A+FSI +NG
Sbjct: 310 S-ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNG 365
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 117 bits (293), Expect = 2e-24
Identities = 53/117 (45%), Positives = 82/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK I+K+L +R+ +L + I+P QSAFI R +M+N LA EL++ Y K
Sbjct: 795 YRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDY-HK 853
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
G++ RC +KIDL KA+D + W FL + L L+ F++WI C+++A+FS+ +NG
Sbjct: 854 DGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNG 910
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 116 bits (291), Expect = 3e-24
Identities = 54/117 (46%), Positives = 82/117 (70%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ VL K I+ QSAF+K R +++N LA EL++ Y K
Sbjct: 529 YRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDY-HK 587
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
I+ RC +KID+ KA+D + W FL +V L F F++WI C+T+A+FS+ +NG
Sbjct: 588 DTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNG 644
>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
Length = 402
Score = 115 bits (289), Expect = 5e-24
Identities = 57/117 (48%), Positives = 81/117 (69%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPI+C N +YK+I+KI+ +R+ +L LIS Q+AF KGRS+ D+ LA EL++ Y R
Sbjct: 33 FRPISCCNFLYKVISKIIANRLQLLLPWLISGNQAAFQKGRSMGDHIMLAAELVKDYNRP 92
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S M+KID++KA+D ISWDF+ D+L L+ F+ WI C+TS +FS+ ING
Sbjct: 93 SA-EPSAMLKIDIKKAFDSISWDFILDILRALDLPLVFIGWIRECITSPSFSVAING 148
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 115 bits (288), Expect = 6e-24
Identities = 56/119 (47%), Positives = 79/119 (66%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPI+C N VYK+I+K+LT R+ L IS +QSAF+ GR ++N LA EL+ Y +K
Sbjct: 420 FRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKK 479
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITINGGS 359
+ I M+K+DLRKA+D + WDF+ L LN F WIL C+++A+FS+ +NG S
Sbjct: 480 N-IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHS 537
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 115 bits (288), Expect = 6e-24
Identities = 52/117 (44%), Positives = 81/117 (69%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+C NV+YK+I+KI+ +R+ +L I QSAF++ R +++N LA EL++ Y +
Sbjct: 102 YRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKD 161
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
S I+ RC +KID+ KA+D + W FL + L LNF F +WI C+++ATFS+ +NG
Sbjct: 162 S-ISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNG 217
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 115 bits (288), Expect = 6e-24
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+ NV+YK+++K L +R+ P+L +LISP QSAF+ GR I DN +A E + ++
Sbjct: 368 YRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKN 427
Query: 183 SGI-TARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
+ +A C K+DL KAYD + W FL +Y L F C+V WI++C+TS +S+ NG
Sbjct: 428 KKLSSATCAYKLDLSKAYDRVDWKFLEQSMYKLGFAHCWVNWIMSCITSVRYSVKFNG 485
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 115 bits (288), Expect = 6e-24
Identities = 54/119 (45%), Positives = 81/119 (68%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
FRPI+C N +YK+I K+LTSR+ +L ++ISP+QSAF+ GR + +N LA E++ Y K
Sbjct: 524 FRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTK 583
Query: 183 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITINGGS 359
+ I++R M+K+DLRKA+D + WDF+ L FV WI C+++ FS+ +NG S
Sbjct: 584 N-ISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSS 641
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 115 bits (288), Expect = 6e-24
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = +3
Query: 3 FRPIACTNVVYKIITKILTSRMTPVLQKLISPAQSAFIKGRSIMDNFYLAQELIRTYERK 182
+RPI+ NV+YK+++K L +R+ P+L +LISP QSAF+ GR I DN +A E + ++
Sbjct: 368 YRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKN 427
Query: 183 SGI-TARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFVYWILTCVTSATFSITING 353
+ +A C K+DL KAYD + W FL +Y L F C+V WI++C+TS +S+ NG
Sbjct: 428 KKLSSATCAYKLDLSKAYDRVDWKFLEQSMYKLGFAHCWVNWIMSCITSVRYSVKFNG 485