BLASTX nr result

ID: Mentha22_contig00038927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00038927
         (580 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indi...    64   3e-08
gb|ABF99235.1| GRF zinc finger family protein, expressed [Oryza ...    63   5e-08
ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group] g...    63   5e-08
ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...    60   3e-07
ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [S...    58   2e-06
ref|XP_002522209.1| conserved hypothetical protein [Ricinus comm...    57   4e-06
dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   5e-06

>gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indica Group]
          Length = 384

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
 Frame = -1

Query: 319 SGDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQW 149
           SG  G    D GG V      C  G C +L S+T  NPGR+F+RCP  D   GGC +F+W
Sbjct: 144 SGGGGGGYGDAGGAVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRD--NGGCNYFEW 201

Query: 148 FDKPFEGAARQALMTVVRKLKHVEAKLECVEAENRSLRYELKTAK 14
            D P  G A  +  TV +    V A + C       L    KT K
Sbjct: 202 CDNPSPGPANVSSNTVFQSDTSV-AHMLCPCGAGACLILTTKTGK 245


>gb|ABF99235.1| GRF zinc finger family protein, expressed [Oryza sativa Japonica
           Group]
          Length = 405

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
 Frame = -1

Query: 319 SGDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQW 149
           SG  G    D GG V      C  G C +L S+T  NPGR+F+RCP  D   GGC +F+W
Sbjct: 144 SGGGGGGYGDAGGAVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRD--NGGCNYFEW 201

Query: 148 FDKPFEGAARQALMTVVRKLKHVEAKLECVEAENRSLRYELKTAK 14
            D P  G A  +  TV +    V A + C       L    KT K
Sbjct: 202 CDNPSPGPANVSGNTVFQSDTSV-AHMLCPCGAGACLILTTKTGK 245


>ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group]
           gi|50355715|gb|AAT75240.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|108711439|gb|ABF99234.1| GRF zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549960|dbj|BAF13403.1| Os03g0786500 [Oryza sativa
           Japonica Group] gi|215741242|dbj|BAG97737.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222625927|gb|EEE60059.1| hypothetical protein
           OsJ_12863 [Oryza sativa Japonica Group]
          Length = 384

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
 Frame = -1

Query: 319 SGDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQW 149
           SG  G    D GG V      C  G C +L S+T  NPGR+F+RCP  D   GGC +F+W
Sbjct: 144 SGGGGGGYGDAGGAVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRD--NGGCNYFEW 201

Query: 148 FDKPFEGAARQALMTVVRKLKHVEAKLECVEAENRSLRYELKTAK 14
            D P  G A  +  TV +    V A + C       L    KT K
Sbjct: 202 CDNPSPGPANVSGNTVFQSDTSV-AHMLCPCGAGACLILTTKTGK 245


>ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 300

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = -1

Query: 316 GDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQWF 146
           G  G    D  G V      C  G C +L S+T  NPGR+F+RCP  D   GGC FF+W 
Sbjct: 62  GGGGGGYVDANGAVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRD--NGGCNFFEWC 119

Query: 145 DKPFEGAA 122
           D P  GAA
Sbjct: 120 DTPSSGAA 127


>ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [Setaria italica]
          Length = 370

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = -1

Query: 322 MSGDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQ 152
           + G +G    + GG V      C  G C +L S+T  NPGR+F++CP  D   GGC FF+
Sbjct: 125 IGGGAGGGYVNAGGEVEEKACPCGAGSCLVLTSNTPRNPGRKFYKCPLRD--NGGCNFFE 182

Query: 151 WFDKPFEGAARQALMTV 101
           W D P  G A     TV
Sbjct: 183 WCDAPSPGPANARSNTV 199


>ref|XP_002522209.1| conserved hypothetical protein [Ricinus communis]
           gi|223538580|gb|EEF40184.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 28/99 (28%), Positives = 54/99 (54%)
 Frame = -1

Query: 319 SGDSGSAVSDIGGVVRPSCKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQWFDK 140
           S ++  + + +  +  P C+HG  +LL S ++ NP  RF++CP   Q      FF+W + 
Sbjct: 3   SQNTNGSYNSVNYMATPRCRHGLTDLLTSWSLDNPFWRFFKCP-LRQTTSDYNFFRWIEG 61

Query: 139 PFEGAARQALMTVVRKLKHVEAKLECVEAENRSLRYELK 23
           P+ G  ++ L+ ++ K K++E  L+    +N  L  +L+
Sbjct: 62  PYNGMVKEMLIDLLTKKKYLEETLKIQTHQNDLLEKKLE 100


>dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 322 MSGDSGSAVSDIGGVVRPS---CKHGRCNLLPSHTIANPGRRFWRCPHWDQIGGGCEFFQ 152
           + G +G  V D+GG V      C  G C +L S T  NPGR+F+RCP  D   GGC FF+
Sbjct: 126 IGGGAGGYV-DMGGEVEEKACPCGSGICLVLTSSTPRNPGRKFYRCPTRD--NGGCNFFE 182

Query: 151 WFDKPFEGAA 122
           W D P  G A
Sbjct: 183 WCDAPSLGPA 192


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