BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00037291
         (379 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Mor...    80   3e-13
ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...    78   1e-12
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]    78   1e-12
ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Popu...    76   5e-12
ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III s...    75   7e-12
ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citr...    74   2e-11
ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phas...    67   2e-09
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s...    67   2e-09
gb|AFK37258.1| unknown [Lotus japonicus]                               66   6e-09
ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutr...    65   7e-09
dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]         65   1e-08
ref|XP_002525535.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidop...    65   1e-08
ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Caps...    64   2e-08
ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Caps...    64   2e-08
gb|AFK40316.1| unknown [Lotus japonicus]                               64   2e-08
ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9...    63   4e-08
ref|XP_003576296.1| PREDICTED: DNA-directed RNA polymerase III s...    62   8e-08
ref|XP_002866524.1| hypothetical protein ARALYDRAFT_496480 [Arab...    62   8e-08
ref|XP_007227296.1| hypothetical protein PRUPE_ppa017050mg [Prun...    62   1e-07

>gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Morus notabilis]
          Length = 163

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 34/72 (47%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           C+QT+E V++F+++C+K+DLAKAE+LNI+NIR     E++ I+E+CE   R+ D  +EL+
Sbjct: 53  CDQTKENVNEFLEKCKKYDLAKAEVLNIINIRASTAVEIYLIVEDCE--KRLGDDVDELV 110

Query: 183 ETITGILPPHPS 218
           +T+  +LPP P+
Sbjct: 111 KTVAEVLPPAPT 122


>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 54/72 (75%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQTRE +++ +++C+K+DLAKAEILNI+NIRP +  E+  IIEE E   RM +  E+L+
Sbjct: 53  CNQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESE--KRMGEGIEDLI 110

Query: 183 ETITGILPPHPS 218
           E +  +LPP P+
Sbjct: 111 EMVITVLPPPPN 122


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 54/72 (75%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQTRE +++ +++C+K+DLAKAEILNI+NIRP +  E+  IIEE E   RM +  E+L+
Sbjct: 74  CNQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESE--KRMGEGIEDLI 131

Query: 183 ETITGILPPHPS 218
           E +  +LPP P+
Sbjct: 132 EMVITVLPPPPN 143


>ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Populus trichocarpa]
           gi|222855719|gb|EEE93266.1| hypothetical protein
           POPTR_0005s06860g [Populus trichocarpa]
          Length = 159

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/71 (50%), Positives = 52/71 (73%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CN TRE +++F++ C+K+DLAKAE+LNI+NIRP    E++TIIEE ++   M    EEL+
Sbjct: 53  CNLTREKINEFLERCKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEM-PIIEELV 111

Query: 183 ETITGILPPHP 215
           E +  +LPP P
Sbjct: 112 ELVEEVLPPPP 122


>ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
           isoform X1 [Citrus sinensis]
           gi|568872598|ref|XP_006489454.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC9-like isoform X2 [Citrus
           sinensis]
          Length = 165

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/72 (48%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQTR I+++F+++ +KF LAKAEILNI+NIRP +  E+ +IIE+C+T    E++ +EL+
Sbjct: 53  CNQTRNIINEFLEKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDT-RFQEEELQELV 111

Query: 183 ETITGILPPHPS 218
           + +  +LPP P+
Sbjct: 112 DLVIEVLPPLPN 123


>ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citrus clementina]
           gi|567853814|ref|XP_006420027.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
           gi|557521899|gb|ESR33266.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
           gi|557521900|gb|ESR33267.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
          Length = 163

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/69 (49%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQTR I+++F+++ +KF LAKAEILNI+NIRP +  E+ +IIE+C+T    E++ +EL+
Sbjct: 53  CNQTRNIINEFLEKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDT-RFQEEELQELV 111

Query: 183 ETITGILPP 209
           + +  +LPP
Sbjct: 112 DLVVEVLPP 120


>ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phaseolus vulgaris]
           gi|561036857|gb|ESW35387.1| hypothetical protein
           PHAVU_001G230900g [Phaseolus vulgaris]
          Length = 154

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +3

Query: 6   NQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLE 185
           +QTRE +++F+   ++ DLAKAE+LNI+N RP +E E+F IIE CE G   +++  E++E
Sbjct: 54  DQTRESINEFLTCIKRHDLAKAEVLNILNTRPTSEVEIFPIIESCE-GRFPDEEVTEIVE 112

Query: 186 TITGILPPHP 215
            +T  LPP P
Sbjct: 113 LVTKTLPPPP 122


>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Cucumis sativus] gi|449523065|ref|XP_004168545.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc9-like [Cucumis sativus]
          Length = 160

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQTRE +  F ++ +++DLAKAEILNI+N+RP    ELF +IE C+   RM + A E +
Sbjct: 53  CNQTREAIINFAEKSKEYDLAKAEILNIINLRPTTPVELFPVIENCDA--RMGEGATERM 110

Query: 183 ETITGILPPH 212
           E I G++  H
Sbjct: 111 EEI-GLMVEH 119


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/71 (46%), Positives = 49/71 (69%)
 Frame = +3

Query: 6   NQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLE 185
           NQTRE +++F+   +K DLAKAE+LNI+NIRP    E+F IIEECE+    +++  E++E
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECES-RFPDEEVTEIVE 112

Query: 186 TITGILPPHPS 218
            +   LP  P+
Sbjct: 113 LVKKTLPAPPA 123


>ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutrema salsugineum]
           gi|557090971|gb|ESQ31618.1| hypothetical protein
           EUTSA_v10005100mg [Eutrema salsugineum]
          Length = 140

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           C QTRE V++F D+C+ F + KAEILNI+N+RP +  EL  II   ET    E  ++ +L
Sbjct: 53  CTQTRESVNEFADKCKAFKVWKAEILNIINLRPSSIVELMPII---ETPDNREIDSDGIL 109

Query: 183 ETITGILPPHPS 218
           E +  +LPP PS
Sbjct: 110 ELVQDLLPPLPS 121


>dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]
          Length = 166

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLET 188
           QTRE ++KF D+C+ F LAKAEILNI+N+RP +  EL  IIE  +     E   + +LE 
Sbjct: 82  QTRESINKFADKCKDFKLAKAEILNIINLRPSSIVELLPIIENLDD---REIDTDGILEL 138

Query: 189 ITGILPPHPS 218
           +  +LPP P+
Sbjct: 139 VKDLLPPLPT 148


>ref|XP_002525535.1| conserved hypothetical protein [Ricinus communis]
           gi|223535214|gb|EEF36893.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           C QTRE +++F+++C+ + LAKAEILNI+NI P+   EL  IIE+ E   R  D  EE+ 
Sbjct: 53  CRQTREQINEFMEKCKAYKLAKAEILNIINIVPRELVELDPIIEKSEV--RFGDLLEEVK 110

Query: 183 ETITGILPPHP 215
           + +  I PP P
Sbjct: 111 DLVCDIFPPPP 121


>ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|334188590|ref|NP_001190602.1| RNA polymerase II,
           Rpb4, core protein [Arabidopsis thaliana]
           gi|32815911|gb|AAP88340.1| At5g62950 [Arabidopsis
           thaliana] gi|110743157|dbj|BAE99470.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332010294|gb|AED97677.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
           gi|332010296|gb|AED97679.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
          Length = 139

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLET 188
           QTRE ++KF D+C+ F LAKAEILNI+N+RP +  EL  IIE  +     E   + +LE 
Sbjct: 55  QTRESINKFADKCKDFKLAKAEILNIINLRPSSIVELLPIIENLDD---REIDTDGILEL 111

Query: 189 ITGILPPHPS 218
           +  +LPP P+
Sbjct: 112 VKDLLPPLPT 121


>ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Capsella rubella]
           gi|565475100|ref|XP_006295191.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
           gi|482563898|gb|EOA28088.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
           gi|482563899|gb|EOA28089.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
          Length = 144

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPR-MEDKAEELLE 185
           QTRE V+KF D+C+ F +AKAEILNI+N+RP +  EL  IIE  + G +  +   + +LE
Sbjct: 55  QTRESVNKFADKCKDFKVAKAEILNIINLRPSSAVELAPIIETPKKGEKERKIDTDGILE 114

Query: 186 TITGILPPHPS 218
            +  +LPP P+
Sbjct: 115 LVKDLLPPLPT 125


>ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Capsella rubella]
           gi|482549981|gb|EOA14175.1| hypothetical protein
           CARUB_v10027325mg [Capsella rubella]
          Length = 145

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIE--ECETGPRMEDKAEELL 182
           QTRE V+KF D+C+ F +AKAEILNI+N+RP ++ +L  IIE  + E G       + +L
Sbjct: 55  QTRESVNKFADKCKDFKVAKAEILNIINLRPSSKVDLAPIIEMPDKEKGETRTIDTDGIL 114

Query: 183 ETITGILPPHPS 218
           E +  +LPP P+
Sbjct: 115 ELVKDLLPPLPT 126


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +3

Query: 6   NQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMED-KAEELL 182
           NQTRE +++F+   +K DLAKAE+LNI+NI P    E+F IIEECE  PR  D +  E++
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECE--PRFPDEEVTEIV 111

Query: 183 ETITGILPPHPS 218
           E     LP  P+
Sbjct: 112 ELAKKTLPAPPA 123


>ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9 [Theobroma cacao]
           gi|508713887|gb|EOY05784.1| DNA-directed RNA polymerase
           III subunit RPC9 [Theobroma cacao]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELL 182
           CNQT+E ++ F++ C+ + LAKAE+LNI+N+RP    E+  IIE+ E   R   + EEL+
Sbjct: 128 CNQTKEHINDFLERCKNYKLAKAEVLNIINLRPSALVEIDPIIEQSE--KRFGKQLEELV 185

Query: 183 ETITGILPPHPS 218
             +  +LP  P+
Sbjct: 186 NLVVEVLPEPPT 197


>ref|XP_003576296.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
           [Brachypodium distachyon]
          Length = 217

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
 Frame = +3

Query: 3   CNQTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEEC--------ETGPRM 158
           CNQTRE V +FV  C+ F L  A+  N++N RP +  +++ ++EEC        + G   
Sbjct: 53  CNQTRESVTEFVKRCEGFKLTDADKQNVINWRPSSAADVYAMVEECGKRFSKDEQGGTTN 112

Query: 159 EDK-AEELLETITGILPPHPS 218
           EDK  EELL  I  I PP P+
Sbjct: 113 EDKRVEELLNLINEIFPPPPT 133


>ref|XP_002866524.1| hypothetical protein ARALYDRAFT_496480 [Arabidopsis lyrata subsp.
           lyrata] gi|297312359|gb|EFH42783.1| hypothetical protein
           ARALYDRAFT_496480 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLET 188
           QTRE V KF D+C+ F +AKAEILNI+N+RP +  EL  II   ET    +   + +LE 
Sbjct: 52  QTRESVTKFADKCKDFKVAKAEILNIINLRPSSIVELLPII---ETPDDRKINTDGILEL 108

Query: 189 ITGILPPHPS 218
           +  +LPP P+
Sbjct: 109 VKDLLPPLPT 118


>ref|XP_007227296.1| hypothetical protein PRUPE_ppa017050mg [Prunus persica]
           gi|462424232|gb|EMJ28495.1| hypothetical protein
           PRUPE_ppa017050mg [Prunus persica]
          Length = 160

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 46/66 (69%)
 Frame = +3

Query: 9   QTREIVDKFVDECQKFDLAKAEILNIVNIRPKNEPELFTIIEECETGPRMEDKAEELLET 188
           QT E +++F ++C+K+DLA+AE+LNI+N RP +   ++ +IE C+   R+ D  EEL+E 
Sbjct: 54  QTTENINEFKEKCKKYDLAEAEVLNIINTRPSSIVGIYPLIENCDL--RLGDTVEELVEL 111

Query: 189 ITGILP 206
           +  + P
Sbjct: 112 VVEVFP 117