BLASTX nr result

ID: Mentha22_contig00036940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00036940
         (526 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251630.1| PREDICTED: golgin candidate 1-like [Solanum ...    72   8e-11
ref|XP_006353486.1| PREDICTED: golgin candidate 1-like [Solanum ...    70   4e-10
emb|CBI28011.3| unnamed protein product [Vitis vinifera]               56   5e-06
ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vi...    56   5e-06

>ref|XP_004251630.1| PREDICTED: golgin candidate 1-like [Solanum lycopersicum]
          Length = 722

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
 Frame = +1

Query: 1   IDTEREQIIPETSELPAQLDGNIPSPLIETSETNPGVPTSKVDSDEQSKANNDGSVIETS 180
           ++ EREQ     S+     D +    L E S TNPG P+SK  ++++ K + DG  ++  
Sbjct: 67  VNFEREQTSQGMSQSDIASDKDKAIVLTEDSRTNPGSPSSKTSTEDKPKVSEDGVSLDAP 126

Query: 181 VFGTISDNEAKPGGDHVDTEKSTDVEARASKINGESQMEEFGDNLVEN--PPNAPIDALV 354
           +  T S+NE     DHV+  +  DV A +S+  GE       D   E    P A +   V
Sbjct: 127 ISETASNNELNHHADHVEAAEPVDVRAVSSESTGEHTSGNTPDISGETLLLPTAEVVDSV 186

Query: 355 LNGDPSVDVNRNLISEDVGTIKNIELSGSQTPHEDTPIKVDARSKDVDLVNEP 513
            +  P V  ++N +  D G+  N +   S++   D P K+D + KD     EP
Sbjct: 187 QDKSP-VGSSQNTVLLDSGSPVNFQQERSKSLTADEPGKIDRQMKDAKTNAEP 238


>ref|XP_006353486.1| PREDICTED: golgin candidate 1-like [Solanum tuberosum]
          Length = 722

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
 Frame = +1

Query: 1   IDTEREQIIPETSELPAQLDGNIPSPLIETSETNPGVPTSKVDSDEQSKANNDGSVIETS 180
           ++ EREQ     S+     D +    L E S TNPG P+SK  ++++ K + DG+ ++  
Sbjct: 67  VNFEREQTSQGMSQSDIASDKDKAIVLTEDSRTNPGSPSSKTSTEDKLKVSEDGASLDAP 126

Query: 181 VFGTISDNEAKPGGDHVDTEKSTDVEARASKINGESQMEEFGDNLVENPPNAPIDALVL- 357
           +  T S+NE     DH++  +  DV   +S        E  G++   N P+ P + L+L 
Sbjct: 127 ISETASNNELNHHADHMEAAEPVDVRVVSS--------ESTGEHTSGNTPDIPGETLLLP 178

Query: 358 --------NGDPSVDVNRNLISEDVGTIKNIELSGSQTPHEDTPIKVDARSKDVDLVNEP 513
                        VD ++N +  D G+  N +   S +   D P K+D +  D     EP
Sbjct: 179 TAKVVDTVQDKSPVDSSQNTVLLDAGSPVNFQQERSISLTADQPGKIDRQMTDAKTNAEP 238


>emb|CBI28011.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
 Frame = +1

Query: 85  ETSETNPGVPTSKVDSDEQSKANNDGSVIETSVFGTISDNEAKPGGDHVDTEKS-TDVEA 261
           E  ET     T++ ++++    N D SV       T+ ++  KP  D  +   + TDVEA
Sbjct: 97  ENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPEADLPEVAPTVTDVEA 156

Query: 262 RASKINGESQMEEFGDNLVENPPNAPIDAL-VLNGDPSVDVNRNLISEDVGTIKNIELSG 438
            AS  NGE   ++   N  +    +P   + +++ D  V+  +N+ S D      I+  G
Sbjct: 157 IASTSNGELVNDKADANEGQPTSFSPTAGVEIVSEDHPVEAGQNIKSRDADVPSQIDQEG 216

Query: 439 SQTPHEDTPIKVDARSKDVDLVNEPV 516
           SQ+ + D P   D +S D ++  E +
Sbjct: 217 SQSVNVDAPSSSDTQSNDSEIKVETI 242


>ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vinifera]
          Length = 694

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
 Frame = +1

Query: 85  ETSETNPGVPTSKVDSDEQSKANNDGSVIETSVFGTISDNEAKPGGDHVDTEKS-TDVEA 261
           E  ET     T++ ++++    N D SV       T+ ++  KP  D  +   + TDVEA
Sbjct: 79  ENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPEADLPEVAPTVTDVEA 138

Query: 262 RASKINGESQMEEFGDNLVENPPNAPIDAL-VLNGDPSVDVNRNLISEDVGTIKNIELSG 438
            AS  NGE   ++   N  +    +P   + +++ D  V+  +N+ S D      I+  G
Sbjct: 139 IASTSNGELVNDKADANEGQPTSFSPTAGVEIVSEDHPVEAGQNIKSRDADVPSQIDQEG 198

Query: 439 SQTPHEDTPIKVDARSKDVDLVNEPV 516
           SQ+ + D P   D +S D ++  E +
Sbjct: 199 SQSVNVDAPSSSDTQSNDSEIKVETI 224


Top