BLASTX nr result

ID: Mentha22_contig00036786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00036786
         (693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29788.1|AF147259_11 contains similarity to a family of Ara...    62   2e-07
gb|AAD48072.1|AF160181_4 contains similarity to a family of Arab...    59   2e-06
ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp....    59   2e-06

>gb|AAD29788.1|AF147259_11 contains similarity to a family of Arabidopsis thaliana
           hypothetical proteins; see GB:AF077408
           gi|7267360|emb|CAB81133.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 538

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
 Frame = +1

Query: 97  MSTLEVEMRGKSYSYVNFQLNNVKCRLSSADIAKIFRVPPSFINKFSFDH---RAFWNEL 267
           M   E E RG    Y+ F++ +V+  L    +  IF  P     +  +D    ++ W  +
Sbjct: 82  MQEREKEERG-GLGYITFKVRDVEYTLDICHLNTIFGFPSGEGIRQDYDQEELKSLWKTI 140

Query: 268 VLDENRPYVAGNSKVSHIRNPVFRMVIRIIAHTILARKDNGGVRDDELYI----LYCMLH 435
           V    +P+    SK S IRNPV R + + IA+T+  +K  G V ++EL +    L  +L 
Sbjct: 141 V--GPKPFSPTKSKSSSIRNPVIRYLHQCIANTLFPKKVTGSVSEEELCMIDQSLVFILR 198

Query: 436 E-----------MEINISHFFLKHL--------DKHTRALSGKICIGGMLTPWAKHFKPD 558
           E            + ++S   L HL          H   + G +C+GG+LTP       +
Sbjct: 199 ETKDGRKMDGDRADTSLSVVLLDHLLSYMEYAATIHRSGIRGSLCVGGLLTPILGAVGME 258

Query: 559 VFGWPPMTGSTFLDFAHLKDMKFLFSKKAP---YLF 657
            FG P +    F+D  +LK   FL  K  P   YLF
Sbjct: 259 -FGTPDVL-PKFIDLDYLKGKDFL-EKTTPADRYLF 291


>gb|AAD48072.1|AF160181_4 contains similarity to a family of Arabidopsis thaliana of
           hypothetical proteins; see GB:AF077408 [Arabidopsis
           thaliana] gi|7267354|emb|CAB81127.1| AT4g07570
           [Arabidopsis thaliana]
          Length = 443

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
 Frame = +1

Query: 73  YKKATLEIMSTLEV---------EMRGKSYSYVNFQLNNVKCRLSSADIAKIFRVPPSFI 225
           YK+ + ++++TL+V         E RG    Y+ F++  V+  L+  +I  IF  P    
Sbjct: 72  YKEESCQLLATLKVHFCVDDSEKEERG-GLGYITFKVMGVEYTLNICNIDTIFGFPSGEG 130

Query: 226 NKFSFDH---RAFWNELVLDENRPYVAGNSKVSHIRNPVFRMVIRIIAHTILARKDNGGV 396
            +  +D    ++ W  +     +P++   SK S IRNPV R + + IA+T+  +K  G V
Sbjct: 131 IRQDYDQQELKSLWKTIA--GPKPFLPTKSKSSSIRNPVIRYLHQCIANTLFPKKATGFV 188

Query: 397 RDDELYI----LYCMLHE-----------MEINISHFFLKHLDK--------HTRALSGK 507
            ++EL +    L  +L E            + ++S   L HL          H+  + G 
Sbjct: 189 SEEELCMIDQSLVFILRETRDGRKMAGDRADTSLSVVLLDHLLSYKEYAAAIHSSGIHGS 248

Query: 508 ICIGGMLTPWAKHFKPDVFGWPPMTGSTFLDFAHLKDMKFLFSKKAP---YLFMLKKS 672
           +C+G +L P       ++ G P +    F+D  +LK   FL  K  P   YLF    S
Sbjct: 249 LCVGSLLMPILGAVGMEL-GAPDVL-PKFIDLDYLKGKDFL-EKTTPADRYLFKFNHS 303


>ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334123|gb|EFH64541.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
 Frame = +1

Query: 70  TYKKATLEIMSTLEVEM-----RGKSYSYVNFQLNNVKCRLSSADIAKIFRVPPSFINKF 234
           T+++ T + +ST++VE      +  S   + F++ N    L+  DI +++         F
Sbjct: 81  TFEEETRDFLSTVKVEYEKPRDKVASQGLMTFKIRNKGYGLTIFDICEVYGFSKGEAVSF 140

Query: 235 SFDHRA--FWNELVLDENRPYVAGNSKVSHIRNPVFRMVIRIIAHTILARKDNGGVRDDE 408
              H A   WN +    N  Y    +K++ IRNPV R V +++A+T  ARKD G V   E
Sbjct: 141 DTFHGANYLWNRIA---NGNYKTHGAKMTGIRNPVIRYVCKLLANTFFARKDAGAVTLKE 197

Query: 409 LYILYCMLHEMEINI 453
           L +LY  L  + I++
Sbjct: 198 LCLLYQGLKHLLIDM 212


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