BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00036571
         (741 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   440   e-121
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   394   e-107
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   385   e-104
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   383   e-104
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    375   e-101
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   374   e-101
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   373   e-101
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   373   e-101
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     373   e-101
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       372   e-101
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   372   e-101
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   371   e-100
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    371   e-100
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     370   e-100
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   370   e-100
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   370   e-100
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   369   e-100
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   369   e-100
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   363   3e-98

>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  440 bits (1132), Expect = e-121
 Identities = 214/246 (86%), Positives = 230/246 (93%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            L+FKVMFMVNAVVHKGIINQHQ S  FFDLLR Q EE NLVALKHIYSYKRP YDA RAL
Sbjct: 328  LNFKVMFMVNAVVHKGIINQHQTSKQFFDLLRSQPEELNLVALKHIYSYKRPVYDAYRAL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
            D+V KWL+KNPKLLQRP+QMDDIVEVRRL+ITPSKAYCLPPEVELSNRVLR Y++ISDRF
Sbjct: 388  DSVTKWLIKNPKLLQRPDQMDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKNISDRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDEAMQTLNKNVLTYYAAPIVRE+T NL+PQ+TTMF+RVRDILY+GFYLCGR+YS
Sbjct: 448  LRVTFMDEAMQTLNKNVLTYYAAPIVREITSNLNPQRTTMFKRVRDILYQGFYLCGRRYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAED+ T+V  IK WMGKFTNRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWMGKFTNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P +QAN
Sbjct: 568  PSAQAN 573


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  394 bits (1011), Expect = e-107
 Identities = 184/246 (74%), Positives = 216/246 (87%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKVMF++NAV+HKGIINQHQ+S+   D+ RRQ E+ N VALKH+ SYKRP YDA +A+
Sbjct: 329  ISFKVMFLLNAVMHKGIINQHQISEQLLDMFRRQPEDVNTVALKHMCSYKRPVYDAFKAV 388

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
            + VQ+WL+KNPKLL+RP  MDDIVEVRRLIITP+KAYCLPPEVELSNRVLR Y++++DRF
Sbjct: 389  ETVQRWLLKNPKLLERPRGMDDIVEVRRLIITPAKAYCLPPEVELSNRVLRHYKAVADRF 448

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTF DEAM TLNKN LTYY  P+VR +T + +PQ+TT+F+R++DIL+ GFYLCGRKYS
Sbjct: 449  LRVTFTDEAMSTLNKNALTYYVGPMVRGITSSSNPQRTTIFKRIKDILHSGFYLCGRKYS 508

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAEDK   V +IKNWMG+FTNRNVAKCAARMGQCFSSTYATVEV
Sbjct: 509  FLAFSSNQLRDRSAWFFAEDKDIGVANIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEV 568

Query: 21   PPSQAN 4
            P  Q N
Sbjct: 569  PSKQVN 574


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  385 bits (988), Expect = e-104
 Identities = 182/241 (75%), Positives = 210/241 (87%)
 Frame = -1

Query: 741 LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
           + F+VMF+VNAV+HKGIINQHQ+SD FFDLLR Q ++ N+ ALKHI SY+ P +DA + L
Sbjct: 168 IDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRL 227

Query: 561 DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
             V KWL+KNPKLL+ P+++DDIVEVRRL+ITPSKAYCLPPEVELSNRVLR Y+ +SDRF
Sbjct: 228 KLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRF 287

Query: 381 LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
           LRVTFMDE MQT+N NVL YY APIV+ +T N  PQKT +F+RV+ IL  GFYLCGRKYS
Sbjct: 288 LRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYS 347

Query: 201 FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
           FLAFSSNQLRDRSAWFFAEDK T+V +IK+WMGKFTNRNVAKCAARMGQCFSSTYATVEV
Sbjct: 348 FLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEV 407

Query: 21  P 19
           P
Sbjct: 408 P 408


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  385 bits (988), Expect = e-104
 Identities = 182/241 (75%), Positives = 210/241 (87%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            + F+VMF+VNAV+HKGIINQHQ+SD FFDLLR Q ++ N+ ALKHI SY+ P +DA + L
Sbjct: 330  IDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRL 389

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              V KWL+KNPKLL+ P+++DDIVEVRRL+ITPSKAYCLPPEVELSNRVLR Y+ +SDRF
Sbjct: 390  KLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRF 449

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE MQT+N NVL YY APIV+ +T N  PQKT +F+RV+ IL  GFYLCGRKYS
Sbjct: 450  LRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYS 509

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAEDK T+V +IK+WMGKFTNRNVAKCAARMGQCFSSTYATVEV
Sbjct: 510  FLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEV 569

Query: 21   P 19
            P
Sbjct: 570  P 570


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  383 bits (984), Expect = e-104
 Identities = 175/247 (70%), Positives = 215/247 (87%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SF ++F+VNAV+HKGI+NQHQ+S++FFDLLR Q EE N+ ALKH+ SYK P +DA + L
Sbjct: 328  ISFDILFLVNAVMHKGILNQHQLSESFFDLLRNQPEEINVAALKHLCSYKHPVFDASKRL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              VQ+WL++NPKL++ P+++DDI EVRRL+ITP+KAYCLPPEVELSNRVLRKY+ ++DRF
Sbjct: 388  KLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE MQT+N NV+  Y APIV+E+T+N  PQKT ++ R+R IL  GF+LCGRKYS
Sbjct: 448  LRVTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAEDK+ ++  IKNWMG+FTNRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQANH 1
            P +Q NH
Sbjct: 568  PSTQVNH 574


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  375 bits (962), Expect = e-101
 Identities = 177/246 (71%), Positives = 212/246 (86%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKVMF+VNAV+HKGI+NQHQM++ FF LLR + EE NL ALKH++SYK P  DA++ L
Sbjct: 328  ISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNLAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              +QKWL+KNPKLL+R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL +GF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P S+ N
Sbjct: 568  PSSEVN 573


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  374 bits (961), Expect = e-101
 Identities = 177/246 (71%), Positives = 211/246 (85%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKVMF+VNAV+HKGI+NQHQM++ FF LLR   EE NL ALKH++SYK P  DA++ L
Sbjct: 328  ISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              +QKWL+KNPKLL+R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL +GF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P S+ N
Sbjct: 568  PSSEVN 573


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  373 bits (958), Expect = e-101
 Identities = 180/246 (73%), Positives = 208/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKV+F+VNAV+HKGI+NQHQM+  FF LLR+  E  NL ALKHI+SYKRP  DA+R L
Sbjct: 328  ISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPVNDAIRKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
             +VQKWL  NP LL+R  Q+DD+VEVRRL+ITP+KAYCLPP VELSNRVLRKY+ ISDRF
Sbjct: 388  ASVQKWLFNNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHISDRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+N LTYYAA IVRE+T + +PQ+T +FQRV+ I+ KGFYLCGR+YS
Sbjct: 448  LRVTFMDEGMRNLNRNALTYYAANIVREITSSSNPQRTGIFQRVKIIVNKGFYLCGRRYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAE     V SI NWMGKF NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAETPEIRVTSIINWMGKFGNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
             PS+ N
Sbjct: 568  LPSEVN 573


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  373 bits (957), Expect = e-101
 Identities = 179/246 (72%), Positives = 209/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKV+F+VNAV+ KGI+NQHQM+  FF LLR+  E  NL ALKHI+SYKRP  DA++ L
Sbjct: 329  ISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPVNDAIQKL 388

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
             +VQKWL KNP LL+R  Q+DD+VEVRRL+ITP+KAYCLPP VELSNRVLRKY+ +SDRF
Sbjct: 389  ASVQKWLFKNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHVSDRF 448

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T + +PQ+T +FQRV+ IL KGFYLCGR+YS
Sbjct: 449  LRVTFMDEGMRNLNRNVLTYYAATIVREITSSSNPQRTGIFQRVKSILSKGFYLCGRRYS 508

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAE     V +I NWMGKF NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 509  FLAFSANQLRDRSAWFFAEAPEIRVPNIINWMGKFGNRNVAKCAARMGQCFSSTYATVEV 568

Query: 21   PPSQAN 4
             PS+ N
Sbjct: 569  LPSEVN 574


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  373 bits (957), Expect = e-101
 Identities = 176/246 (71%), Positives = 211/246 (85%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKVMF+VNAV+HKGI+NQHQM++ FF LLR   EE NL ALKH++SYK P  DA++ L
Sbjct: 328  ISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              ++KWL+KNPKLL+R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  VGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL +GF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P S+ N
Sbjct: 568  PSSEVN 573


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  372 bits (955), Expect = e-101
 Identities = 173/246 (70%), Positives = 206/246 (83%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            + F++MF++N +VHKGI NQH +SD  FDL R Q  E NL ALKHI SYKRP +DA   L
Sbjct: 324  IPFEIMFLLNVIVHKGIFNQHNISDGLFDLFRNQPREINLAALKHISSYKRPVFDAYAKL 383

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
             NVQ+WL++NPKLL+ P Q+DDI EVRRL+ITP++AYCLPPEVELSNRVLRKY+ +SDRF
Sbjct: 384  KNVQEWLLRNPKLLKIPRQLDDIAEVRRLVITPTRAYCLPPEVELSNRVLRKYKEVSDRF 443

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE MQT+N NVLTYY APIV+E+T N + QKT +F+RV+ +L  GFYLCG++YS
Sbjct: 444  LRVTFMDEGMQTMNLNVLTYYPAPIVKELTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYS 503

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAED   TV+ IK WMG+F NRN+AKCAARMGQCFSSTYATVEV
Sbjct: 504  FLAFSSNQLRDRSAWFFAEDGKITVNGIKKWMGRFNNRNIAKCAARMGQCFSSTYATVEV 563

Query: 21   PPSQAN 4
            P ++ N
Sbjct: 564  PLTEVN 569


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  372 bits (955), Expect = e-101
 Identities = 176/246 (71%), Positives = 209/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKV+F+ NAV+HKGI+NQHQM + FF LLR   EE NL ALKH++SYK P  DA++ L
Sbjct: 328  ISFKVLFLANAVLHKGIVNQHQMINEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              +QKWL+KNPKLL+R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  AGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL KGF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P S+ N
Sbjct: 568  PSSEVN 573


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  371 bits (953), Expect = e-100
 Identities = 167/246 (67%), Positives = 214/246 (86%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            ++F+V+F+VNAV+HKGI NQHQ+S++FFDLLR Q+ E N+ ALKHI +Y+RP ++A R L
Sbjct: 331  IAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRL 390

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              VQ+WL+KNP L + P+Q+ D+VE+RRL+ITP+KAYCLPPEVELSNRVLRKY+ ++DRF
Sbjct: 391  KAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRF 450

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE +Q +N NVL YY APIVR++T N  PQKT +F+RVR IL +GFYLCGR+YS
Sbjct: 451  LRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYS 510

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRD+SAWFF+E+++ +V  +K+WMGKFTNRN+AKCAARMGQCFSSTYAT+EV
Sbjct: 511  FLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEV 570

Query: 21   PPSQAN 4
            PP + N
Sbjct: 571  PPEEVN 576


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  371 bits (952), Expect = e-100
 Identities = 176/246 (71%), Positives = 209/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SFKVMF+VNAV+HKGI+NQHQM++ FF LLR + EE N  ALKH++SYK P  DA++ L
Sbjct: 328  ISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNSAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              +QKWL+KNPKLL R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  VGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL KGF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P  + N
Sbjct: 568  PSREVN 573


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  370 bits (951), Expect = e-100
 Identities = 175/246 (71%), Positives = 209/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SF+V+F+VNAV+HKGI+NQHQM++ FF LLR   EE N  ALKH++SYK P  DA++ L
Sbjct: 328  ISFRVLFLVNAVLHKGIVNQHQMANEFFYLLRSHQEEVNSAALKHMFSYKWPVNDAIQKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              +QKWL+KNPKLL R  ++DDIVEVRRL+ITP+KAYCLPP VELSNRVLR Y+ ++DRF
Sbjct: 388  AGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE M+ LN+NVLTYYAA IVRE+T N +PQ+T +FQRV+ IL KGF+LCGRKYS
Sbjct: 448  LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P S+ N
Sbjct: 568  PSSEVN 573


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  370 bits (951), Expect = e-100
 Identities = 169/246 (68%), Positives = 209/246 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            ++F V+F+VNAV+HKGI NQHQ+S++FFDLLR Q  E N+ ALKHIY Y+RP +DA + L
Sbjct: 328  IAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
               Q+WL+KNPK  +  +++DDI E+RRL+ITP+KAYCLPPEVELSNRVLRKY+ ++DRF
Sbjct: 388  KVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE +QT+N N L Y+AAPIVR +T    PQKT +F+RVR IL +GFYLCGR+YS
Sbjct: 448  LRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAED++  V +IK+WMGKFTN+N+AKCAARMGQCFSSTYAT+EV
Sbjct: 508  FLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEV 567

Query: 21   PPSQAN 4
            PP + N
Sbjct: 568  PPEEVN 573


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  370 bits (949), Expect = e-100
 Identities = 173/245 (70%), Positives = 208/245 (84%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            + F +MF+VNAV+HKGI NQHQ+SD+FFDLLR Q  + N+ AL+HI SYK P +DA + L
Sbjct: 328  VDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              VQ+WL+KNPKL +  +Q+DDIVE+RRL ITP++AYCLPPEVELSNRVLR+Y+ I+D+F
Sbjct: 388  KAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE +QT+N N LTYY APIVR++T N   QKT +F+RV+ IL  GFYLCGRKYS
Sbjct: 448  LRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSSNQLRDRSAWFFAED  T+V  I+NWMGKFTNRN+AKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQA 7
            P ++A
Sbjct: 568  PSAEA 572


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  369 bits (948), Expect = e-100
 Identities = 173/246 (70%), Positives = 215/246 (87%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SF++MF+VNAV+HKGIINQHQ+SD+FFDLLR Q+ E N+ ALKHIYSYK P +DA + L
Sbjct: 328  ISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              VQ+WL+K+P+L + P+Q+DDIVEVRRL+ITP+KAYCLPPEVELSNRVLRKY+ ++DRF
Sbjct: 388  KLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE +QT+N NVL+Y+ APIVR++T N   QKT +F+RVR IL  GFYLCGRK+S
Sbjct: 448  LRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSS+QLRD SAWFF+ED  T+V  IK WMG+FT++N+AKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            PP++ +
Sbjct: 568  PPTEVD 573


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  369 bits (948), Expect = e-100
 Identities = 173/246 (70%), Positives = 215/246 (87%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            +SF++MF+VNAV+HKGIINQHQ+SD+FFDLLR Q+ E N+ ALKHIYSYK P +DA + L
Sbjct: 328  ISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              VQ+WL+K+P+L + P+Q+DDIVEVRRL+ITP+KAYCLPPEVELSNRVLRKY+ ++DRF
Sbjct: 388  KLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE +QT+N NVL+Y+ APIVR++T N   QKT +F+RVR IL  GFYLCGRK+S
Sbjct: 448  LRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFSS+QLRD SAWFF+ED  T+V  IK WMG+FT++N+AKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            PP++ +
Sbjct: 568  PPTEVD 573


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  363 bits (933), Expect = 3e-98
 Identities = 172/246 (69%), Positives = 206/246 (83%)
 Frame = -1

Query: 741  LSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVALKHIYSYKRPTYDALRAL 562
            + F++MF+VNAV+HKGI NQHQ+S++FF+LLR Q  E N+ ALKHIYSY+RP +DA + L
Sbjct: 328  IPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRL 387

Query: 561  DNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPEVELSNRVLRKYRSISDRF 382
              V  WL++NP L + P+Q+DDIVE+RRL+ITP+KA+CL PEVELSNRVLRKY+ ++DRF
Sbjct: 388  KTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHCLLPEVELSNRVLRKYKEVADRF 447

Query: 381  LRVTFMDEAMQTLNKNVLTYYAAPIVREVTKNLSPQKTTMFQRVRDILYKGFYLCGRKYS 202
            LRVTFMDE MQT+N NVLTYYAA IVR+VT     QKT +F+RVR IL  GFYLCGRKYS
Sbjct: 448  LRVTFMDEGMQTINANVLTYYAASIVRDVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYS 507

Query: 201  FLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQCFSSTYATVEV 22
            FLAFS+NQLRD SAWFFAED  T+V  I  WMGKFTNRN+AKCAARMGQCFSSTYATVEV
Sbjct: 508  FLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIAKCAARMGQCFSSTYATVEV 567

Query: 21   PPSQAN 4
            P ++ N
Sbjct: 568  PSTEVN 573