BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00035777
         (470 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232117.1| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
ref|XP_006338305.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
gb|EXB85825.1| hypothetical protein L484_009671 [Morus notabilis]      62   6e-08
ref|XP_006602983.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_004306041.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_002882233.1| pentatricopeptide repeat-containing protein ...    57   3e-06

>ref|XP_004232117.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Solanum lycopersicum]
          Length = 651

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 12/132 (9%)
 Frame = +3

Query: 111 MRNQWH-RLLLLRCHTPSQPRIS---------QVNH-LRSFTSSIPHARAPPAFLIPF-S 254
           MRNQ    LLLLR H+ +QP IS         QVN  + S  SS  H+RA  + ++P+ S
Sbjct: 1   MRNQQQWLLLLLRHHSLAQPHISRHLINQSPFQVNRSISSIASSTIHSRA--SHMLPYQS 58

Query: 255 LRRRFTSSPELAVEPPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIITHDLILNVL 434
           L     S+ ELAVE     SD  A+L  IFSKP  SN+EIK DL++  V +THDL++  L
Sbjct: 59  LTVHSFSTSELAVE--HKVSDQIAVLTGIFSKPNRSNEEIKIDLESNNVTVTHDLVIRAL 116

Query: 435 KKPDIGSDVAKR 470
           +  +   D A++
Sbjct: 117 RSFNTAPDAARK 128


>ref|XP_006338305.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Solanum tuberosum]
          Length = 651

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 12/132 (9%)
 Frame = +3

Query: 111 MRNQWH-RLLLLRCHTPSQPRIS---------QVNH-LRSFTSSIPHARAPPAFLIPF-S 254
           MRNQ    LLLLR H+ +QP IS         QVN  + +  SS  H+R   + ++P+ S
Sbjct: 1   MRNQQRWLLLLLRHHSLAQPHISRHHINQSPFQVNRSVSTIASSTIHSRT--SHMLPYQS 58

Query: 255 LRRRFTSSPELAVEPPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIITHDLILNVL 434
           L  R  S+ ELAVE     SD  A+L  IFSKP  SN+EIK DL++  V +THDL++  L
Sbjct: 59  LTVRSFSTSELAVE--HKDSDQIAVLTGIFSKPNRSNEEIKLDLESNNVTVTHDLVIRAL 116

Query: 435 KKPDIGSDVAKR 470
           +  +   D A +
Sbjct: 117 RSFNTAPDAAHK 128


>gb|EXB85825.1| hypothetical protein L484_009671 [Morus notabilis]
          Length = 662

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
 Frame = +3

Query: 156 PSQPRISQVNHLRSFTSSIPHARAPPAFLIP----FSLR---------RRFTSSPELAVE 296
           PSQP +   N LRS TS + H+R+P   L P    F++          ++F+S PEL   
Sbjct: 32  PSQPNL---NSLRSLTSLL-HSRSPLGTLSPSQSIFAIDHINPGIQRFQKFSSEPELESR 87

Query: 297 PPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIITHDLILNVLKKPDIGSDVAKR 470
                SD A +++DI SK   S +EIK DL++  ++I+HDLIL VL K +   DVA+R
Sbjct: 88  D----SDQAVIVSDILSKSNNS-EEIKKDLESNGIVISHDLILGVLGKLESSPDVARR 140


>ref|XP_006602983.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571549695|ref|XP_006602984.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 629

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
 Frame = +3

Query: 111 MRNQWHRLL--LLRCHTPSQPRISQVNHLRSFTSSIPHARAPPAFLIPFSLRRRFTSSPE 284
           MR+QW RLL  LLR    S+PRI+  + +  ++SSIP   A  +        RRF+S P 
Sbjct: 1   MRHQW-RLLHHLLR----SRPRITYHSQVLPYSSSIPRRFAANSTFPLNPSFRRFSSEPV 55

Query: 285 LAVEPPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIITHDLILNVLKKPDIGSDVA 464
           LA    +  +D   L+ADIFSKP + +++ KT L + +V ITHD +L VL K D   D A
Sbjct: 56  LA----QADTD-HLLVADIFSKP-VDSEDFKTLLGSNRVSITHDAVLAVLGKFDSNVDAA 109

Query: 465 KR 470
           +R
Sbjct: 110 RR 111


>ref|XP_004306041.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 660

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
 Frame = +3

Query: 111 MRNQWHRLLLLRCHTPSQPRI-------SQV---NHLRSFTSSIPHA------RAPPAFL 242
           MR+ W RLL LR H  S P +       SQV   ++L SF+    H         PP F 
Sbjct: 1   MRHPWQRLLRLRSHLRSSPHVRSQSSSHSQVISQSNLHSFSLFHTHTLHPKLPTLPPIFN 60

Query: 243 IPFSLR----RRFTSSPELAVEPPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIIT 410
            P + R    RR +S PE+  + P        ++A++FSK     D ++ +L+   V  T
Sbjct: 61  YPLNPRNPISRRLSSEPEIESKDPGH-----GVIAEVFSKARDEID-VRKELELHNVEFT 114

Query: 411 HDLILNVLKKPDIGSDVAKR 470
           HD++L+VLK  +   DVA+R
Sbjct: 115 HDVVLSVLKSLESSPDVARR 134


>ref|XP_002882233.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328073|gb|EFH58492.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 667

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
 Frame = +3

Query: 111 MRNQWHRLLLLRCH-TPSQPRISQ-------VNHLRSFTSSIPHARAPPAFL-------- 242
           MR QW RLLL R + + S P +S         N  RSF+S +P      A          
Sbjct: 1   MRYQWRRLLLFRSYRSSSHPFLSHHSQFQVISNSTRSFSSFLPERFEVGALQQRQCLLAL 60

Query: 243 ---IPFSLRRRFTSSPELAVEPPKPPSDLAALLADIFSKPEMSNDEIKTDLDAKKVIITH 413
              +  S+ R F+S P +  +PP        ++ DIFS+   + D+I+ +LD+  V+I+H
Sbjct: 61  RSPLTSSVSRSFSSDPAIEEKPPAE-----TVVIDIFSRLS-AKDDIRKELDSNDVVISH 114

Query: 414 DLILNVLKKPDIGSDVA 464
           +L L VL++ +   DVA
Sbjct: 115 ELALRVLRELESSPDVA 131