BLASTX nr result

ID: Mentha22_contig00035149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00035149
         (389 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...    62   6e-08
gb|EYU45950.1| hypothetical protein MIMGU_mgv1a024533mg, partial...    62   8e-08
ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
emb|CBI16090.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, part...    57   3e-06
ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +1

Query: 40  PNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAISWI 171
           P+DPA Y+LL+N+LA EG WDDA++VRK +C+RG+ K    SWI
Sbjct: 563 PDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606


>gb|EYU45950.1| hypothetical protein MIMGU_mgv1a024533mg, partial [Mimulus
           guttatus]
          Length = 596

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = +1

Query: 4   RKLVQEQPEE*CPNDPAIYVLLANVLANEGSWDDASEVRKQICNRG 141
           RKLV     E CP DPAIYVLLANVLA EGSW+DA+ VRK +C++G
Sbjct: 556 RKLV-----ELCPKDPAIYVLLANVLATEGSWNDAARVRKIMCDKG 596


>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +1

Query: 37  CPNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAISWI 171
           CPNDP IYVLL+NV A  G WD+ + +RK +C+RG+ K+   SWI
Sbjct: 584 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +1

Query: 37  CPNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAISWI 171
           CPNDP IYVLL+NV A  G WD+ + +RK +C+RG+ K+   SWI
Sbjct: 414 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 458


>ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Solanum lycopersicum]
          Length = 536

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +1

Query: 40  PNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAISWI 171
           PNDPA YVLLANVLA EG+W DA   RK + +RG+ KK   SW+
Sbjct: 493 PNDPATYVLLANVLALEGNWKDAEGQRKLMLDRGLSKKPGYSWL 536


>ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, partial [Populus
           trichocarpa] gi|550330984|gb|EEE88117.2| hypothetical
           protein POPTR_0009s04000g, partial [Populus trichocarpa]
          Length = 606

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +1

Query: 40  PNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAI 162
           PNDPA YVLL++VL  +G+WDDA+++RK +C+RG+ KK  +
Sbjct: 559 PNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRGLRKKPGV 599


>ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Fragaria vesca subsp. vesca]
          Length = 558

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = +1

Query: 37  CPNDPAIYVLLANVLANEGSWDDASEVRKQICNRGMVKKVAISWI 171
           CPND   Y+LL+NVL   GSWDDA+ VRK + +RG+ K    SWI
Sbjct: 514 CPNDHGTYILLSNVLLTRGSWDDAAGVRKFMYDRGIRKTPGYSWI 558


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