BLASTX nr result

ID: Mentha22_contig00034812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00034812
         (331 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297941.1| PREDICTED: DNA mismatch repair protein MSH1,...    62   8e-08
ref|XP_007225427.1| hypothetical protein PRUPE_ppa000475mg [Prun...    60   3e-07
ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...    60   4e-07
ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1,...    59   7e-07
ref|XP_002885640.1| hypothetical protein ARALYDRAFT_479946 [Arab...    59   7e-07
ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1,...    58   1e-06
ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1,...    58   1e-06
ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1,...    58   2e-06
ref|XP_006420381.1| hypothetical protein CICLE_v10004190mg [Citr...    58   2e-06
ref|XP_006420379.1| hypothetical protein CICLE_v10004190mg [Citr...    58   2e-06
ref|XP_006418760.1| hypothetical protein EUTSA_v10002376mg [Eutr...    57   2e-06
ref|XP_006299281.1| hypothetical protein CARUB_v10015435mg [Caps...    57   2e-06
dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]         57   2e-06
ref|NP_189075.2| MUTL protein-like protein 1 [Arabidopsis thalia...    57   2e-06
ref|XP_004497789.1| PREDICTED: DNA mismatch repair protein MSH1,...    57   3e-06
ref|XP_003555697.1| PREDICTED: DNA mismatch repair protein MSH1,...    57   3e-06
ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    57   4e-06
ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1,...    57   4e-06
gb|ACA35268.1| DNA mismatch repair protein [Cucumis sativus]           57   4e-06
emb|CBI23729.3| unnamed protein product [Vitis vinifera]               56   5e-06

>ref|XP_004297941.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 1279

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL  +GFHL+N+ADGKHRNFGT+++
Sbjct: 1237 CQLETLLINQLPNQGFHLSNVADGKHRNFGTSNI 1270


>ref|XP_007225427.1| hypothetical protein PRUPE_ppa000475mg [Prunus persica]
            gi|462422363|gb|EMJ26626.1| hypothetical protein
            PRUPE_ppa000475mg [Prunus persica]
          Length = 1144

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL  +GFHL N+ADGKHRNFGT+++
Sbjct: 1102 CQLETLLINQLPYQGFHLTNVADGKHRNFGTSNL 1135


>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL  RGF L+NIADGKHRNFGT++V
Sbjct: 1195 CQIETLLINQLPNRGFLLSNIADGKHRNFGTSNV 1228


>ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Solanum
            lycopersicum]
          Length = 1137

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL   GF L N+ADGKHRNFGTT++
Sbjct: 1095 CQLETLLINQLPNHGFQLTNVADGKHRNFGTTNL 1128


>ref|XP_002885640.1| hypothetical protein ARALYDRAFT_479946 [Arabidopsis lyrata subsp.
            lyrata] gi|297331480|gb|EFH61899.1| hypothetical protein
            ARALYDRAFT_479946 [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVLGA 113
            CQ+ETLLINQL  +G+ LAN+ADGKHRNFGT+  L A
Sbjct: 1072 CQLETLLINQLHEQGYSLANLADGKHRNFGTSSSLSA 1108


>ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
           isoform X2 [Solanum tuberosum]
          Length = 931

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
           CQ+ETLLINQL   GF L N+ADGKHRNFGTT++
Sbjct: 889 CQLETLLINQLPNYGFQLTNVADGKHRNFGTTNL 922


>ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            isoform X1 [Solanum tuberosum]
          Length = 1137

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL   GF L N+ADGKHRNFGTT++
Sbjct: 1095 CQLETLLINQLPNYGFQLTNVADGKHRNFGTTNL 1128


>ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            isoform X1 [Citrus sinensis]
          Length = 1137

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTT 98
            CQ+ETLLINQL ++GF LANIADGKHRNFGT+
Sbjct: 1096 CQIETLLINQLYSQGFLLANIADGKHRNFGTS 1127


>ref|XP_006420381.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
           gi|557522254|gb|ESR33621.1| hypothetical protein
           CICLE_v10004190mg [Citrus clementina]
          Length = 889

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 3   CQMETLLINQLQTRGFHLANIADGKHRNFGTT 98
           CQ+ETLLINQL ++GF LANIADGKHRNFGT+
Sbjct: 848 CQIETLLINQLYSQGFLLANIADGKHRNFGTS 879


>ref|XP_006420379.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
            gi|557522252|gb|ESR33619.1| hypothetical protein
            CICLE_v10004190mg [Citrus clementina]
          Length = 1137

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTT 98
            CQ+ETLLINQL ++GF LANIADGKHRNFGT+
Sbjct: 1096 CQIETLLINQLYSQGFLLANIADGKHRNFGTS 1127


>ref|XP_006418760.1| hypothetical protein EUTSA_v10002376mg [Eutrema salsugineum]
            gi|557096688|gb|ESQ37196.1| hypothetical protein
            EUTSA_v10002376mg [Eutrema salsugineum]
          Length = 1122

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLINQL  +G+ LAN+ADGKHRNFGT+  L
Sbjct: 1079 CQLETLLINQLHEQGYSLANLADGKHRNFGTSSSL 1113


>ref|XP_006299281.1| hypothetical protein CARUB_v10015435mg [Capsella rubella]
            gi|482567990|gb|EOA32179.1| hypothetical protein
            CARUB_v10015435mg [Capsella rubella]
          Length = 1209

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLINQL  +G+ LAN+ADGKHRNFGT+  L
Sbjct: 1166 CQLETLLINQLHEQGYSLANLADGKHRNFGTSSSL 1200


>dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1016

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLINQL  +G+ LAN+ADGKHRNFGT+  L
Sbjct: 973  CQLETLLINQLHEQGYSLANLADGKHRNFGTSSSL 1007


>ref|NP_189075.2| MUTL protein-like protein 1 [Arabidopsis thaliana]
            gi|75297828|sp|Q84LK0.1|MSH1_ARATH RecName: Full=DNA
            mismatch repair protein MSH1, mitochondrial;
            Short=AtMSH1; AltName: Full=MutS protein homolog 1;
            AltName: Full=Protein CHLOROPLAST MUTATOR; Flags:
            Precursor gi|30313805|gb|AAO49798.1| DNA mismatch repair
            protein [Arabidopsis thaliana]
            gi|332643368|gb|AEE76889.1| MUTL protein-like protein 1
            [Arabidopsis thaliana]
          Length = 1118

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLINQL  +G+ LAN+ADGKHRNFGT+  L
Sbjct: 1075 CQLETLLINQLHEQGYSLANLADGKHRNFGTSSSL 1109


>ref|XP_004497789.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            [Cicer arietinum]
          Length = 1141

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+ETLLINQL  +GF L+NIADGKHRNFGT+++
Sbjct: 1106 CQIETLLINQLPNQGFVLSNIADGKHRNFGTSNL 1139


>ref|XP_003555697.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            [Glycine max]
          Length = 1134

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDV 104
            CQ+E+LLINQL +RGF L N ADGKHRNFGT+++
Sbjct: 1099 CQLESLLINQLSSRGFQLTNTADGKHRNFGTSNL 1132


>ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 675

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
           CQ+ETLLIN+L   GF L N+ADGKHRNFGT ++L
Sbjct: 633 CQLETLLINRLPDHGFQLTNVADGKHRNFGTANLL 667


>ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            [Cucumis sativus]
          Length = 1122

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLIN+L   GF L N+ADGKHRNFGT ++L
Sbjct: 1080 CQLETLLINRLPDHGFQLTNVADGKHRNFGTANLL 1114


>gb|ACA35268.1| DNA mismatch repair protein [Cucumis sativus]
          Length = 1227

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTDVL 107
            CQ+ETLLIN+L   GF L N+ADGKHRNFGT ++L
Sbjct: 1185 CQLETLLINRLPDHGFQLTNVADGKHRNFGTANLL 1219


>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +3

Query: 3    CQMETLLINQLQTRGFHLANIADGKHRNFGTTD 101
            CQ+ETLLINQL  +GF L N ADGKHRNFGT D
Sbjct: 1072 CQLETLLINQLPVQGFQLVNRADGKHRNFGTLD 1104


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