BLASTX nr result

ID: Mentha22_contig00032950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00032950
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18382.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus...    70   4e-10
gb|EYU18381.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus...    70   4e-10
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...    56   4e-06

>gb|EYU18382.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus guttatus]
          Length = 642

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/77 (55%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
 Frame = -2

Query: 204 MASAVIASQNESSWAHMGKIPY---HL--XXXXXXXXXXXXXHSTPANGVAGHY----RD 52
           MASAV+ASQNESSWAHMGK PY   HL               H   ANG  G Y     +
Sbjct: 1   MASAVLASQNESSWAHMGKTPYSNPHLNANPNPNPKKKQKQFHLASANGAVGRYHHQNNN 60

Query: 51  SPVVTQTASDDAYSFNQ 1
           SP VTQTASDDAYS+NQ
Sbjct: 61  SPAVTQTASDDAYSYNQ 77


>gb|EYU18381.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus guttatus]
          Length = 637

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/77 (55%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
 Frame = -2

Query: 204 MASAVIASQNESSWAHMGKIPY---HL--XXXXXXXXXXXXXHSTPANGVAGHY----RD 52
           MASAV+ASQNESSWAHMGK PY   HL               H   ANG  G Y     +
Sbjct: 1   MASAVLASQNESSWAHMGKTPYSNPHLNANPNPNPKKKQKQFHLASANGAVGRYHHQNNN 60

Query: 51  SPVVTQTASDDAYSFNQ 1
           SP VTQTASDDAYS+NQ
Sbjct: 61  SPAVTQTASDDAYSYNQ 77


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
           gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
           protein Virp1a [Solanum lycopersicum]
           gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
           protein Virp1b [Solanum lycopersicum]
           gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
           protein Virp1c [Solanum lycopersicum]
           gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
           protein Virp1d [Solanum lycopersicum]
           gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
           gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/78 (46%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
 Frame = -2

Query: 204 MASAVIASQNESSWAH--------MGKIPYHLXXXXXXXXXXXXXHSTPANGVAG--HYR 55
           MASAV+AS+NESSWA         MGK PY                    +  +   H  
Sbjct: 1   MASAVLASRNESSWAQSGGAGGGFMGKTPYSHTQLNPNHNPNPKKKQKQFHHTSNGRHMD 60

Query: 54  DSPVVTQTASDDAYSFNQ 1
           DSP VTQTASDDAYSFNQ
Sbjct: 61  DSPAVTQTASDDAYSFNQ 78


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