BLASTX nr result
ID: Mentha22_contig00032666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00032666
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 159 5e-37
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 143 3e-32
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 142 4e-32
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 134 1e-29
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 130 1e-28
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 130 1e-28
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 124 1e-26
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 123 3e-26
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 123 3e-26
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 123 3e-26
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 123 3e-26
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 122 7e-26
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 121 9e-26
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 114 2e-23
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 114 2e-23
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 109 4e-22
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 107 2e-21
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 104 1e-20
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 104 1e-20
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 104 1e-20
>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
Length = 1719
Score = 159 bits (401), Expect = 5e-37
Identities = 78/120 (65%), Positives = 103/120 (85%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILM+A IKTP+LTCPFS+ RSKR+VV+LV+ VKK+SVADL+E+MEV+L
Sbjct: 1227 VTLGIPRLQEILMSASEVIKTPLLTCPFSQWRSKREVVSLVSHVKKVSVADLIENMEVQL 1286
Query: 182 SITRRQVARIYKLKMKLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNF 361
S+ + AR+YKLKM LK+TEFVS +++ +TL+ FL E+E IENH+++LS++SGIKNF
Sbjct: 1287 SVNHKTAARVYKLKMTLKDTEFVSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNF 1346
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 143 bits (360), Expect = 3e-32
Identities = 77/123 (62%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEILMTA IKTPILTCPF +SK D +L+ KVKKI+VAD++ESMEV+
Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKL 1248
Query: 179 --LSITRRQVARIYKLKMKLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGI 352
LSI QV+++YKL +KLK+ +FVSS+D + TL+ VFL+E+E IE+HL LSKI+GI
Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGI 1308
Query: 353 KNF 361
+NF
Sbjct: 1309 QNF 1311
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 142 bits (359), Expect = 4e-32
Identities = 76/123 (61%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEILMTA IKTPI+TCPF +SK D +L+ KVKKI+VAD++ESMEV+
Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESMEVKL 1248
Query: 179 --LSITRRQVARIYKLKMKLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGI 352
LSI QV+++YKL +KLK+ +FVSS+D + TL+ VFL+E+E IE+HL LSKI+GI
Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGI 1308
Query: 353 KNF 361
+NF
Sbjct: 1309 QNF 1311
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 134 bits (338), Expect = 1e-29
Identities = 67/120 (55%), Positives = 96/120 (80%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA I+TP+LTCPF + +SK + +++++ +KKI++ADL+ESM+V +
Sbjct: 1137 VTLGIPRLQEILMTASEVIRTPMLTCPFLQRQSKPNALSVISNLKKITIADLIESMDVSI 1196
Query: 182 SITRRQVARIYKLKMKLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNF 361
S +V RIYKL+M+LK+TEFVS +D KTL+ FLKE+E +ENH++FL K++ I +F
Sbjct: 1197 SF-HPKVGRIYKLRMRLKDTEFVSLEDTYKTLKTSFLKELEDALENHVVFLKKVAVINDF 1255
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 130 bits (328), Expect = 1e-28
Identities = 72/130 (55%), Positives = 90/130 (69%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA IKTPI+TCP RSK D L K+KK++VAD+ ESMEV +
Sbjct: 1180 VTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSI 1239
Query: 182 ---SITRRQVARIYKLKMKLKETEF------VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ Q IYKLKMKL E +S +D ++TLE VF++E+E I+NHL+ L
Sbjct: 1240 VPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLL 1299
Query: 335 SKISGIKNFM 364
SKISGIKNF+
Sbjct: 1300 SKISGIKNFL 1309
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 130 bits (328), Expect = 1e-28
Identities = 72/130 (55%), Positives = 90/130 (69%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA IKTPI+TCP RSK D L K+KK++VAD+ ESMEV +
Sbjct: 1251 VTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSI 1310
Query: 182 ---SITRRQVARIYKLKMKLKETEF------VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ Q IYKLKMKL E +S +D ++TLE VF++E+E I+NHL+ L
Sbjct: 1311 VPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLL 1370
Query: 335 SKISGIKNFM 364
SKISGIKNF+
Sbjct: 1371 SKISGIKNFL 1380
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 124 bits (311), Expect = 1e-26
Identities = 68/130 (52%), Positives = 93/130 (71%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA IKTPI+TCP E R+K D L K+KK++VAD++ESMEV +
Sbjct: 614 VTLGIPRLQEILMTASADIKTPIMTCPLHEGRTKEDAERLSDKLKKVTVADIVESMEVSV 673
Query: 182 ---SITRRQVARIYKLKMKL------KETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ + RIYKLKMKL + +S ++ ++TLE +F++E+E I+N+L+ L
Sbjct: 674 MPFAVQNDDICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNYLVLL 733
Query: 335 SKISGIKNFM 364
SKISGIKNF+
Sbjct: 734 SKISGIKNFL 743
>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
isoform 4 [Theobroma cacao]
Length = 1397
Score = 123 bits (308), Expect = 3e-26
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA I+TP++TCP + ++K D + L K+KKI+VAD+LESMEV +
Sbjct: 900 VTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSV 959
Query: 182 ---SITRRQVARIYKLKM------KLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ + IYKLKM K E ++ KD + L+ VFL+E+E I+NHL+ L
Sbjct: 960 APFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLL 1019
Query: 335 SKISGIKNFM 364
SKISGIK FM
Sbjct: 1020 SKISGIKKFM 1029
>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
isoform 3 [Theobroma cacao]
Length = 1400
Score = 123 bits (308), Expect = 3e-26
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA I+TP++TCP + ++K D + L K+KKI+VAD+LESMEV +
Sbjct: 903 VTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSV 962
Query: 182 ---SITRRQVARIYKLKM------KLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ + IYKLKM K E ++ KD + L+ VFL+E+E I+NHL+ L
Sbjct: 963 APFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLL 1022
Query: 335 SKISGIKNFM 364
SKISGIK FM
Sbjct: 1023 SKISGIKKFM 1032
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 123 bits (308), Expect = 3e-26
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA I+TP++TCP + ++K D + L K+KKI+VAD+LESMEV +
Sbjct: 1192 VTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSV 1251
Query: 182 ---SITRRQVARIYKLKM------KLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ + IYKLKM K E ++ KD + L+ VFL+E+E I+NHL+ L
Sbjct: 1252 APFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLL 1311
Query: 335 SKISGIKNFM 364
SKISGIK FM
Sbjct: 1312 SKISGIKKFM 1321
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 123 bits (308), Expect = 3e-26
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA I+TP++TCP + ++K D + L K+KKI+VAD+LESMEV +
Sbjct: 1195 VTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSV 1254
Query: 182 ---SITRRQVARIYKLKM------KLKETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
++ + IYKLKM K E ++ KD + L+ VFL+E+E I+NHL+ L
Sbjct: 1255 APFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLL 1314
Query: 335 SKISGIKNFM 364
SKISGIK FM
Sbjct: 1315 SKISGIKKFM 1324
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 122 bits (305), Expect = 7e-26
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA IKTPI+TCP E R+ D L K++K++VAD++ESMEV +
Sbjct: 1181 VTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSV 1240
Query: 182 ---SITRRQVARIYKLKMKL------KETEFVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
+I V RIYKLKMKL + +S +D ++TLE VFL+E+E I+NH+ L
Sbjct: 1241 VPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLL 1300
Query: 335 SKISGIKNFM 364
S+ISGIK+F+
Sbjct: 1301 SRISGIKDFL 1310
>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
gi|462398594|gb|EMJ04262.1| hypothetical protein
PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 121 bits (304), Expect = 9e-26
Identities = 69/129 (53%), Positives = 89/129 (68%), Gaps = 9/129 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEILMTA IKTP++TCP + RSK + L K+KKI+VAD++ESM+V
Sbjct: 1102 VTLGIPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTF 1161
Query: 179 --LSITRRQVARIYKLKMKLKETEFV------SSKDIKKTLEGVFLKEMEVQIENHLIFL 334
I Q RIYKL+M L E + SS+D ++ LE VF++E+E I+NH++ L
Sbjct: 1162 VPFFIQDGQTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLL 1221
Query: 335 SKISGIKNF 361
SKISGIKNF
Sbjct: 1222 SKISGIKNF 1230
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 114 bits (284), Expect = 2e-23
Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 9/157 (5%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGIPRLQEILMTA IKTPI+TCP E S L K+KKI+VAD++ESM V +
Sbjct: 1162 VTLGIPRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTV 1221
Query: 182 ---SITRRQVARIYKLKMKLKETE------FVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
S +R++ IYKL++ E +S +D++ TLE VFL+E+E IE ++ L
Sbjct: 1222 VPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLL 1281
Query: 335 SKISGIKNFMXXXXXXXXXXXXXXXXXXXRKSDDDDK 445
SKI+GIK F+ + DDDD+
Sbjct: 1282 SKINGIKXFVPDSQSKGSSEGDEVSSSRQEEMDDDDE 1318
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 114 bits (284), Expect = 2e-23
Identities = 68/156 (43%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVRL 181
VTLGI RLQEILMTA IKTPI+TCP E S L K+KKI+VAD++ESM V +
Sbjct: 1159 VTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTV 1218
Query: 182 ---SITRRQVARIYKLKMKLKETE------FVSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
S +R++ IYKL++ E +S +D++ TLE VFL+E+E IE ++ L
Sbjct: 1219 VPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLL 1278
Query: 335 SKISGIKNFMXXXXXXXXXXXXXXXXXXXRKSDDDD 442
SKI+GIKNF+ +++DDDD
Sbjct: 1279 SKINGIKNFVPDSQSKGSSEGDEVSSSRQKENDDDD 1314
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 109 bits (272), Expect = 4e-22
Identities = 63/129 (48%), Positives = 85/129 (65%), Gaps = 9/129 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEILM A IKTP +TCP +S +D + L K+KKI+VAD+++SM+V
Sbjct: 1158 VTLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSV 1217
Query: 179 --LSITRRQVARIYKLKMKL-KETEFVSSKDI-----KKTLEGVFLKEMEVQIENHLIFL 334
+++ QV IYKL MKL K ++ DI ++TL F++E+E I+NH+ L
Sbjct: 1218 VPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLL 1277
Query: 335 SKISGIKNF 361
SKISGIK F
Sbjct: 1278 SKISGIKKF 1286
>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
gi|561018822|gb|ESW17626.1| hypothetical protein
PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 107 bits (267), Expect = 2e-21
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 9/129 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEI+M A IKTP +TCP +S + + L K+KKI+VAD+++SM+V
Sbjct: 1152 VTLGIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSV 1211
Query: 179 --LSITRRQVARIYKLKMKL-KETEF-----VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
+S+ QV IYKL MKL K ++ ++ +D + TL F++E+E IENH+ L
Sbjct: 1212 VPVSVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALL 1271
Query: 335 SKISGIKNF 361
SKISGIK F
Sbjct: 1272 SKISGIKKF 1280
>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1660
Score = 104 bits (260), Expect = 1e-20
Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEIL A IKTP +TCP +S D + L K+KKI+VAD++ESM+V
Sbjct: 1159 VTLGIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSV 1218
Query: 179 --LSITRRQVARIYKLKMKLKETEF------VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
+++ ++ IYKL MKL + + V+ KD ++TL F++ +E IEN++ L
Sbjct: 1219 VPVTVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALL 1278
Query: 335 SKISGIKNFMXXXXXXXXXXXXXXXXXXXRKSDDDD 442
+KISGI NF DDDD
Sbjct: 1279 AKISGITNFKTDAQPNSSNGAEDDPSNGKTNDDDDD 1314
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 104 bits (260), Expect = 1e-20
Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRLQEIL A IKTP +TCP +S D + L K+KKI+VAD++ESM+V
Sbjct: 1155 VTLGIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSV 1214
Query: 179 --LSITRRQVARIYKLKMKLKETEF------VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
+++ ++ IYKL MKL + + V+ KD ++TL F++ +E IEN++ L
Sbjct: 1215 VPVTVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALL 1274
Query: 335 SKISGIKNFMXXXXXXXXXXXXXXXXXXXRKSDDDD 442
+KISGI NF DDDD
Sbjct: 1275 AKISGITNFKTDAQPNSSNGAEDDPSNGKTNDDDDD 1310
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 104 bits (259), Expect = 1e-20
Identities = 57/129 (44%), Positives = 85/129 (65%), Gaps = 9/129 (6%)
Frame = +2
Query: 2 VTLGIPRLQEILMTAPTKIKTPILTCPFSEVRSKRDVVALVTKVKKISVADLLESMEVR- 178
VTLGIPRL EI++ A IKTP +TCP +S D + L K+KKI+VAD++ESM+V
Sbjct: 1146 VTLGIPRLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSV 1205
Query: 179 --LSITRRQVARIYKLKMKLKETEF------VSSKDIKKTLEGVFLKEMEVQIENHLIFL 334
+++ ++ IYKL MKL + + V+ +D ++TL F++E+E IENH+ L
Sbjct: 1206 VPVAVKEGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLL 1265
Query: 335 SKISGIKNF 361
++ISGIK+F
Sbjct: 1266 ARISGIKDF 1274