BLASTX nr result
ID: Mentha22_contig00031996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00031996
(635 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 316 3e-84
gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partia... 291 1e-76
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 290 2e-76
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 231 1e-58
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 227 2e-57
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 212 9e-53
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 211 1e-52
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 207 3e-51
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 207 3e-51
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 206 5e-51
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 206 6e-51
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 205 8e-51
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 205 1e-50
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ... 205 1e-50
ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, par... 204 1e-50
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 204 2e-50
ref|XP_002883964.1| hypothetical protein ARALYDRAFT_319567 [Arab... 202 7e-50
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar... 202 9e-50
gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana] 202 9e-50
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 201 2e-49
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 316 bits (810), Expect = 3e-84
Identities = 161/213 (75%), Positives = 185/213 (86%), Gaps = 2/213 (0%)
Frame = +1
Query: 1 ISPHGHEEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVE 180
IS + HEE VL RKSVSEARRLFMHIHTL++IEKYMAR SLILSKTT+IDLDFAAIIVE
Sbjct: 335 ISSNDHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRIDLDFAAIIVE 394
Query: 181 IIEDIPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLI 360
IIEDIPFQD +GSII DEDGKPILHTDGTGYIS+DLA+KC K+ +AS HN ++++E LLI
Sbjct: 395 IIEDIPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHNTNSTFEPLLI 454
Query: 361 QCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE--TFNSLEIVNTSCK 534
QCRLFHDGYAVKGTLLVNRKLEPGRIQ+R SMIKVEKD ++++E FNSLEI S +
Sbjct: 455 QCRLFHDGYAVKGTLLVNRKLEPGRIQIRPSMIKVEKDHSMESEEILKFNSLEINTISRR 514
Query: 535 PRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
P ++ LSKYLI+LL+YGGVPQEFFL LL +LE
Sbjct: 515 PNRNFLSKYLISLLSYGGVPQEFFLNLLFKALE 547
>gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partial [Mimulus
guttatus]
Length = 379
Score = 291 bits (744), Expect = 1e-76
Identities = 146/211 (69%), Positives = 180/211 (85%)
Frame = +1
Query: 1 ISPHGHEEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVE 180
ISP+ EE VL RK++SEARRLFMHIHTL++IEKYMARF+LILSKT K+DL+FAA+ +E
Sbjct: 135 ISPY--EEDYVLSRKTISEARRLFMHIHTLSTIEKYMARFALILSKTIKLDLNFAAVTIE 192
Query: 181 IIEDIPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLI 360
IEDIPFQD++GSI++DEDGKPILHTDGTGYISEDLA KC K+ +K+ + ++E LL+
Sbjct: 193 RIEDIPFQDENGSIVYDEDGKPILHTDGTGYISEDLAKKCPKDFTTAKYITNNNFEPLLM 252
Query: 361 QCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPR 540
QCRLFHDG AVKGTLL+N+KL+PG IQVR SMIKV+KD L N ETFNSLEIV S +P
Sbjct: 253 QCRLFHDGVAVKGTLLINKKLKPGTIQVRPSMIKVDKDPTLPNNETFNSLEIVAISHRPG 312
Query: 541 QSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
++ LSKYLI+LL+YGGVP++FFL LL N+L+
Sbjct: 313 RNNLSKYLISLLSYGGVPRQFFLDLLTNALD 343
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 290 bits (743), Expect = 2e-76
Identities = 141/211 (66%), Positives = 176/211 (83%)
Frame = +1
Query: 1 ISPHGHEEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVE 180
+SP G++E +L RK++ EARR+FMHIHT++SIEK MAR SLILSK+ K++++ AA+I+E
Sbjct: 245 VSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAVIIE 304
Query: 181 IIEDIPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLI 360
I+DIPFQD+ G +IHDEDGKPILHTDGTGYISEDLAI+C A K+ D +E LL+
Sbjct: 305 KIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRFEPLLV 364
Query: 361 QCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPR 540
QCR+FH+GYAVKGTLLVNRKLEPG IQ+R SMIKVE+D ++ +E FNSLEIVN S KP
Sbjct: 365 QCRIFHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDHNIKVEEAFNSLEIVNISHKPG 424
Query: 541 QSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
++ LSKYLIALL+YGGVPQEFFL L+ N+LE
Sbjct: 425 RNCLSKYLIALLSYGGVPQEFFLNLVANTLE 455
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 231 bits (590), Expect = 1e-58
Identities = 116/204 (56%), Positives = 157/204 (76%)
Frame = +1
Query: 22 EKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPF 201
E + L K+V EAR +FMH H ++S+ KYMARFSLILSKT K+D+D + + ++ I+D P
Sbjct: 279 ESSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPG 338
Query: 202 QDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYELLLIQCRLFHD 381
+D+DG +++DED KP++ TDGTG+ISEDLA++C L K+ + + + LLIQCRLF++
Sbjct: 339 RDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDPLLIQCRLFNN 398
Query: 382 GYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPRQSKLSKY 561
G AVKGTLL+NRKL P IQ+R SMIKVE D KL + +T NS+EI TS +PR+S LSKY
Sbjct: 399 GCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKY 458
Query: 562 LIALLNYGGVPQEFFLKLLMNSLE 633
LIALL+YGGVP E+F+ LL ++LE
Sbjct: 459 LIALLSYGGVPNEYFMNLLKDALE 482
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 227 bits (579), Expect = 2e-57
Identities = 119/210 (56%), Positives = 158/210 (75%), Gaps = 6/210 (2%)
Frame = +1
Query: 22 EKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPF 201
E + L K+V EAR +FMH H ++S+ KYMARFSLILSKT K+D+D + + ++ I+D P
Sbjct: 287 ESSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPG 346
Query: 202 QDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKH----NADT--SYELLLIQ 363
+D+DG +++DED KP++ TDGTG+ISEDLA++C L K+ N+D S LLIQ
Sbjct: 347 RDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDVCDSRYPLLIQ 406
Query: 364 CRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPRQ 543
CRLF++G AVKGTLL+NRKL P IQ+R SMIKVE D KL + +T NS+EI TS +PR+
Sbjct: 407 CRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRR 466
Query: 544 SKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
S LSKYLIALL+YGGVP E+F+ LL ++LE
Sbjct: 467 SYLSKYLIALLSYGGVPNEYFMNLLKDALE 496
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 212 bits (539), Expect = 9e-53
Identities = 120/228 (52%), Positives = 147/228 (64%), Gaps = 24/228 (10%)
Frame = +1
Query: 22 EKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPF 201
E +L K V EAR FMH+H ++S+ KYMARFSLILS T K+ +D ++ ++ IEDI
Sbjct: 366 ETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYC 425
Query: 202 QDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHN-------------ADTS 342
DK G II+DEDGKP++HTDGTGYISEDLA KC ++ KH + S
Sbjct: 426 HDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKCANLVRYANGVKLGENS 485
Query: 343 YEL-----------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQN 489
EL LL+QCRLF++G AVKGTLLVNRKL IQ+R SMIKVE D +L
Sbjct: 486 SELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPQRTIQIRPSMIKVEADPRLSR 545
Query: 490 QETFNSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
FNSLEI S KPR + LS+ LIALL YGGVP E+F +L N+LE
Sbjct: 546 AHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLE 593
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 211 bits (538), Expect = 1e-52
Identities = 120/231 (51%), Positives = 151/231 (65%), Gaps = 25/231 (10%)
Frame = +1
Query: 16 HEEKNVLLR-KSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIED 192
+E++ +LR K V EAR FMH+H ++S+ KYMARFSL LS T K+ +D ++ ++ IED
Sbjct: 419 YEKETYILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIED 478
Query: 193 IPFQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHN-------------A 333
I DK G II+DEDGKP++HTDGTGYISEDLA KC ++ KH
Sbjct: 479 ICCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHRCANLERYTNGVKLG 538
Query: 334 DTSYEL-----------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQK 480
+ S EL LL+QCRLF++G AVKGTLLVNRKL IQ+R SMIKVE D +
Sbjct: 539 ENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPR 598
Query: 481 LQNQETFNSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
L + FNSLEI S KPR + LS+ LIALL YGGVP E+F +L N+LE
Sbjct: 599 LSRAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLE 649
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 207 bits (526), Expect = 3e-51
Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 25/226 (11%)
Frame = +1
Query: 31 VLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDK 210
+L K+V EAR +FMH+ T++S+ YM+R SLILSKT K+++DF+ I +E IED P +DK
Sbjct: 339 ILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDK 398
Query: 211 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL------------- 351
DG++++ +DG+ ++HTDGTG+ISEDLA+KC ++ K D S E
Sbjct: 399 DGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSD 457
Query: 352 ------------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE 495
LL+Q RLF++G AVKGTLL+N+KL P IQ+R SMIKV+ D+ L + +
Sbjct: 458 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 517
Query: 496 TFNSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
TFNSLE+V TS +PR++ LS+ LIALL+YGGVP+ FFL +L N+L+
Sbjct: 518 TFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALD 563
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 207 bits (526), Expect = 3e-51
Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 25/226 (11%)
Frame = +1
Query: 31 VLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDK 210
+L K+V EAR +FMH+ T++S+ YM+R SLILSKT K+++DF+ I +E IED P +DK
Sbjct: 341 ILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDK 400
Query: 211 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL------------- 351
DG++++ +DG+ ++HTDGTG+ISEDLA+KC ++ K D S E
Sbjct: 401 DGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSD 459
Query: 352 ------------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQE 495
LL+Q RLF++G AVKGTLL+N+KL P IQ+R SMIKV+ D+ L + +
Sbjct: 460 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 519
Query: 496 TFNSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
TFNSLE+V TS +PR++ LS+ LIALL+YGGVP+ FFL +L N+L+
Sbjct: 520 TFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALD 565
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 206 bits (524), Expect = 5e-51
Identities = 109/212 (51%), Positives = 141/212 (66%), Gaps = 7/212 (3%)
Frame = +1
Query: 19 EEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIP 198
E + KS+ EAR FMH+H ++ YMARFSLILSKT +++D I + I+DI
Sbjct: 324 ENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIH 383
Query: 199 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASK-------HNADTSYELLL 357
D+DG + D++ KP +H+DGTGYISEDLA C + K A LL
Sbjct: 384 CHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENIQEACNQDPPLL 443
Query: 358 IQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKP 537
IQ R+F+DGYAVKGT L+N+KL P +QVR SMIKV KD L N TFN+LE+V TS P
Sbjct: 444 IQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPP 503
Query: 538 RQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
R++KLSK L+ALL+YGG+P EFFL +L+N+LE
Sbjct: 504 RRTKLSKNLVALLSYGGIPNEFFLDILLNTLE 535
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 206 bits (523), Expect = 6e-51
Identities = 113/224 (50%), Positives = 151/224 (67%), Gaps = 20/224 (8%)
Frame = +1
Query: 22 EKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPF 201
+ N+L K++ +AR +FMH+ L+S+ YMARFSLILSKT +++D + + ++ I D P
Sbjct: 206 QDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSFVDIKPIADEPC 265
Query: 202 QDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKE------LHASK------HNADTSY 345
+DKDG+ ++ DGKP++HTDGTG+IS DLA+KC K L AS HN
Sbjct: 266 RDKDGNAVYGTDGKPLIHTDGTGFISHDLALKCPKNQVKGTCLQASNIERLRVHNEVMEQ 325
Query: 346 EL--------LLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETF 501
LLIQ RLF++G AVKGT LVN+KL + VR SMIKVE D KL N +
Sbjct: 326 NPECLHGDPPLLIQFRLFNNGRAVKGTFLVNKKLNHRTLHVRPSMIKVETDPKLSNTFSK 385
Query: 502 NSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
NSLEIV TSC+P+++ LSK LIALL+YGGVP+EFF+ +L N+LE
Sbjct: 386 NSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALE 429
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 205 bits (522), Expect = 8e-51
Identities = 108/208 (51%), Positives = 142/208 (68%), Gaps = 7/208 (3%)
Frame = +1
Query: 31 VLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDK 210
+L KS+ EAR FMH+H ++ YMARFSLILSKT +++D I + I+DI D+
Sbjct: 324 ILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQIDDIHCHDQ 383
Query: 211 DGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL-------LLIQCR 369
DG + D++ KP +H+DGTGYISEDLA C + K S + LLIQ R
Sbjct: 384 DGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFR 443
Query: 370 LFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPRQSK 549
+F+DGYAVKGT L+N+KL P +QVR SMIKV KD L N TFN+LE+V TS P+++K
Sbjct: 444 MFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTK 503
Query: 550 LSKYLIALLNYGGVPQEFFLKLLMNSLE 633
LSK L+ALL+YGG+P EFFL +L+N+LE
Sbjct: 504 LSKNLVALLSYGGIPNEFFLDILLNTLE 531
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 205 bits (521), Expect = 1e-50
Identities = 109/212 (51%), Positives = 146/212 (68%), Gaps = 7/212 (3%)
Frame = +1
Query: 19 EEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIP 198
E+ + KS+ EAR FMH+HTL S+ YMARFSLILSKT K+++D + EII+DIP
Sbjct: 328 EKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIP 387
Query: 199 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASK-------HNADTSYELLL 357
D+DG + D++ KP +H+DGTGYISEDLA C ++ K A LL
Sbjct: 388 CHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIKEACGQEPPLL 447
Query: 358 IQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKP 537
IQ R+F++GYA+KGT L+N+K+ +QVR SMIKV D L N TFN+LE+VNTS P
Sbjct: 448 IQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPD-SLPNISTFNTLEVVNTSFPP 506
Query: 538 RQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
+++KLS+ L+ALL+YGG+P EFFL +L N+LE
Sbjct: 507 KRTKLSRNLVALLSYGGIPDEFFLDILHNTLE 538
>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 205 bits (521), Expect = 1e-50
Identities = 108/213 (50%), Positives = 141/213 (66%), Gaps = 16/213 (7%)
Frame = +1
Query: 43 KSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDKDGSI 222
KS+ EAR FMH++TL+S+ YMARFSLILSKT +++D I E I+DI D+D
Sbjct: 357 KSMHEARMHFMHVNTLSSLPNYMARFSLILSKTKTLEVDMTGITFEQIDDIHCHDQDNKD 416
Query: 223 IHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL----------------L 354
+ D++GKP +H+DGTGYISEDLA C + K + + L
Sbjct: 417 VLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKIPNIEGQGPCGQEPPL 476
Query: 355 LIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCK 534
LIQ R+FH+GYAVKGT L N+KL P +QVR SMIKV +DQ + N TFNSLE+V TS
Sbjct: 477 LIQFRMFHNGYAVKGTFLTNKKLPPWTVQVRPSMIKVNEDQTMSNFSTFNSLEVVTTSNP 536
Query: 535 PRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
PR ++LS+ L+ALL+YGGVP +FFL +L N+LE
Sbjct: 537 PRNARLSRNLVALLSYGGVPNDFFLNILRNTLE 569
>ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris] gi|561026288|gb|ESW24973.1| hypothetical
protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
Length = 689
Score = 204 bits (520), Expect = 1e-50
Identities = 119/228 (52%), Positives = 150/228 (65%), Gaps = 27/228 (11%)
Frame = +1
Query: 31 VLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDK 210
+L K+VSEAR LFMH H L S++KYMARFSLILSKT K+++D A + V+ I+D+ QD+
Sbjct: 300 ILSNKTVSEARGLFMHAHLLPSLDKYMARFSLILSKTFKLNIDLATVNVQTIQDVYCQDE 359
Query: 211 DGSIIHDEDGKPILHTDGTGYISEDLAIKC---------------------------LKE 309
+G+II+D + KP + TDGTG+IS DLA+ C KE
Sbjct: 360 NGNIIYDNE-KPRILTDGTGFISGDLALLCPNSVCKGNNLENNYIQEINNLLELEDMCKE 418
Query: 310 LHASKHNADTSYELLLIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQN 489
+ ++ T LLIQCRLFH G A+KGTLLVN+KL P I VR SMIKVE D L N
Sbjct: 419 MGETELKLTTHQPPLLIQCRLFHMGSAIKGTLLVNKKLPPRTIHVRPSMIKVETDLSL-N 477
Query: 490 QETFNSLEIVNTSCKPRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
++ NSLEIVNTS KP ++ LSK LIALL+YGGVP EFF LL ++LE
Sbjct: 478 MQSINSLEIVNTSIKPNRTYLSKNLIALLSYGGVPNEFFKSLLESNLE 525
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 204 bits (518), Expect = 2e-50
Identities = 109/204 (53%), Positives = 146/204 (71%), Gaps = 7/204 (3%)
Frame = +1
Query: 43 KSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDKDGSI 222
K+++EAR FMH+HTL S+ KYMARFSLILSKT K+++D I + I++I D++ ++
Sbjct: 340 KTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIHCHDQNNNV 399
Query: 223 IHDEDGKPILHTDGTGYISEDLAIKC----LKELHASKHNADTSYEL---LLIQCRLFHD 381
+ D++ +P +H+DGTGYISEDLA C K SK N S LLIQ R+F+D
Sbjct: 400 VLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCLSKKNIQESCGQDPPLLIQFRMFYD 459
Query: 382 GYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKPRQSKLSKY 561
G AVKGT L+N+KL +QVR SMIKV KD+ L N TFNSLE+V TS P+++KLS+
Sbjct: 460 GNAVKGTFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVVTTSNPPKRTKLSRN 519
Query: 562 LIALLNYGGVPQEFFLKLLMNSLE 633
L+ALL+YGGVP EFFL LL+N++E
Sbjct: 520 LVALLSYGGVPNEFFLDLLLNTME 543
>ref|XP_002883964.1| hypothetical protein ARALYDRAFT_319567 [Arabidopsis lyrata subsp.
lyrata] gi|297329804|gb|EFH60223.1| hypothetical protein
ARALYDRAFT_319567 [Arabidopsis lyrata subsp. lyrata]
Length = 893
Score = 202 bits (514), Expect = 7e-50
Identities = 109/213 (51%), Positives = 143/213 (67%), Gaps = 8/213 (3%)
Frame = +1
Query: 19 EEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIP 198
E +L S+ EAR FMH+HTL S YMARFSLILSKT K+++D I V+ I+DI
Sbjct: 319 ENPYILAGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTGITVKQIDDIH 378
Query: 199 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE--------LL 354
D+ + + D++GKP +H+DGTGYISEDLA C + K+ + L
Sbjct: 379 CHDQSNNDVLDKNGKPRIHSDGTGYISEDLARMCPVNIFKGKNIKSDIIQGKTCGQEPPL 438
Query: 355 LIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCK 534
LIQ R+F+DG AVKG L+N+ L P +QVR SMIKV KD+ L N TFNSLE+V TS
Sbjct: 439 LIQIRMFNDGSAVKGIFLLNKNLPPRTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNP 498
Query: 535 PRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
P+++KLSK L+ALL+YGGVP +FFL +L+N+LE
Sbjct: 499 PKRAKLSKNLVALLSYGGVPNDFFLDILLNTLE 531
>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 4;
Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
polymerase family protein [Arabidopsis thaliana]
Length = 927
Score = 202 bits (513), Expect = 9e-50
Identities = 109/212 (51%), Positives = 142/212 (66%), Gaps = 7/212 (3%)
Frame = +1
Query: 19 EEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIP 198
E +L S+ EAR FMH+HTL S YMARFSLILSKT K+++D I V I+DI
Sbjct: 324 ENPYILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIH 383
Query: 199 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE-------LLL 357
D+ + + D++GKP +H+DGTGYISEDLA C + K + + LL
Sbjct: 384 CHDQSNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPPLL 443
Query: 358 IQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKP 537
IQ R+F+DG AVKG L+N+ L P +QVR SMIKV KD+ L N TFNSLE+V TS P
Sbjct: 444 IQIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPP 503
Query: 538 RQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
+++KLSK L+ALL+YGGVP +FFL +L+N+LE
Sbjct: 504 KRAKLSKNLVALLSYGGVPNDFFLDILLNTLE 535
>gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]
Length = 905
Score = 202 bits (513), Expect = 9e-50
Identities = 109/212 (51%), Positives = 142/212 (66%), Gaps = 7/212 (3%)
Frame = +1
Query: 19 EEKNVLLRKSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIP 198
E +L S+ EAR FMH+HTL S YMARFSLILSKT K+++D I V I+DI
Sbjct: 329 ENPYILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIH 388
Query: 199 FQDKDGSIIHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYE-------LLL 357
D+ + + D++GKP +H+DGTGYISEDLA C + K + + LL
Sbjct: 389 CHDQSNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPPLL 448
Query: 358 IQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCKP 537
IQ R+F+DG AVKG L+N+ L P +QVR SMIKV KD+ L N TFNSLE+V TS P
Sbjct: 449 IQIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPP 508
Query: 538 RQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
+++KLSK L+ALL+YGGVP +FFL +L+N+LE
Sbjct: 509 KRAKLSKNLVALLSYGGVPNDFFLDILLNTLE 540
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 201 bits (511), Expect = 2e-49
Identities = 108/213 (50%), Positives = 142/213 (66%), Gaps = 16/213 (7%)
Frame = +1
Query: 43 KSVSEARRLFMHIHTLTSIEKYMARFSLILSKTTKIDLDFAAIIVEIIEDIPFQDKDGSI 222
KS+ EAR FMH++TL S+ YMARFSLILSKT K+++D I + I+DI D++ +
Sbjct: 313 KSIHEARMHFMHVNTLPSLANYMARFSLILSKTKKLEVDMTGITFQQIDDIHCHDQENNN 372
Query: 223 IHDEDGKPILHTDGTGYISEDLAIKCLKELHASKHNADTSYEL----------------L 354
+ D+ GKP +H+DGTGYISEDLA C ++ K + + L
Sbjct: 373 VLDKHGKPCIHSDGTGYISEDLARMCPTDIFKGKCIGIDNIQSKIPNVEAQGTCGKEPPL 432
Query: 355 LIQCRLFHDGYAVKGTLLVNRKLEPGRIQVRRSMIKVEKDQKLQNQETFNSLEIVNTSCK 534
LIQ R+F+DGYAVKGT L+N+KL +QVR SMIKV DQ L N TFNSLE+VNTS
Sbjct: 433 LIQFRMFYDGYAVKGTFLLNKKLPDRTVQVRPSMIKVYNDQTLSNFSTFNSLEVVNTSNP 492
Query: 535 PRQSKLSKYLIALLNYGGVPQEFFLKLLMNSLE 633
P ++KLS+ L+ALL+YGGVP +FFL +L N+LE
Sbjct: 493 PNRTKLSRNLVALLSYGGVPNDFFLDILRNTLE 525