BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00030056
         (737 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu...   447   e-123
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   446   e-123
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas...   442   e-122
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...   442   e-122
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...   442   e-122
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...   441   e-121
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas...   441   e-121
emb|CAD89519.1| RNA polymerase II second largest subunit [Davidi...   440   e-121
emb|CAD91516.1| RNA polymerase II second largest subunit [Garrya...   440   e-121
gb|AAY85195.1| RNA polymerase II second largest subunit [Callist...   440   e-121
emb|CAD88602.1| RNA polymerase II second largest subunit [Alangi...   440   e-121
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   440   e-121
emb|CAD89691.1| RNA polymerase II, second largest subunit [Escal...   439   e-121
emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]       439   e-121
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...   439   e-121
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   439   e-121
gb|AAS86833.1| RNA polymerase II second largest subunit, partial...   439   e-121
ref|XP_007025632.1| DNA-directed RNA polymerase family protein i...   439   e-121
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...   439   e-121
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...   439   e-121

>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
            gi|550340301|gb|EEE85647.2| hypothetical protein
            POPTR_0004s04320g [Populus trichocarpa]
          Length = 1215

 Score =  447 bits (1150), Expect = e-123
 Identities = 216/245 (88%), Positives = 224/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  HDLVQAR  P+EAYSDTYTHCEIHPSLILGV
Sbjct: 678  GGWHDLVSKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGV 737

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 738  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 797

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 798  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 857

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA ++AQGQ+ARYT
Sbjct: 858  EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYT 917

Query: 721  KRDHS 735
            +RDHS
Sbjct: 918  RRDHS 922


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  446 bits (1146), Expect = e-123
 Identities = 215/245 (87%), Positives = 223/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                  HDLVQAR  P+EAYSDTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA ++AQGQ+ARYT
Sbjct: 837  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYT 896

Query: 721  KRDHS 735
            +RDHS
Sbjct: 897  RRDHS 901


>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
            gi|561021391|gb|ESW20162.1| hypothetical protein
            PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score =  442 bits (1138), Expect = e-122
 Identities = 214/245 (87%), Positives = 223/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  +DLVQAR  P++AYSDTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT
Sbjct: 837  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYT 896

Query: 721  KRDHS 735
            +RDHS
Sbjct: 897  RRDHS 901


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score =  442 bits (1137), Expect = e-122
 Identities = 213/245 (86%), Positives = 224/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                  +DLVQAR  P+EAY+DTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ D+AQGQA+RYT
Sbjct: 837  EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYT 896

Query: 721  KRDHS 735
            +RDHS
Sbjct: 897  RRDHS 901


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
            gi|557525528|gb|ESR36834.1| hypothetical protein
            CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score =  442 bits (1137), Expect = e-122
 Identities = 213/245 (86%), Positives = 224/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                  +DLVQAR  P+EAY+DTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ D+AQGQA+RYT
Sbjct: 837  EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYT 896

Query: 721  KRDHS 735
            +RDHS
Sbjct: 897  RRDHS 901


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score =  441 bits (1135), Expect = e-121
 Identities = 213/245 (86%), Positives = 223/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  +DLVQAR  P+EAYSDTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P++ ++AQGQAARY+
Sbjct: 837  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYS 896

Query: 721  KRDHS 735
            KRDHS
Sbjct: 897  KRDHS 901


>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
            gi|561011794|gb|ESW10701.1| hypothetical protein
            PHAVU_009G230400g [Phaseolus vulgaris]
          Length = 1196

 Score =  441 bits (1134), Expect = e-121
 Identities = 213/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  +DLVQAR  P+EAYSDTYTHCEIHPSLILGV
Sbjct: 655  GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGV 714

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 715  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 774

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 775  LHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 834

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT
Sbjct: 835  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYT 894

Query: 721  KRDHS 735
            +RDHS
Sbjct: 895  RRDHS 899


>emb|CAD89519.1| RNA polymerase II second largest subunit [Davidia involucrata]
          Length = 396

 Score =  440 bits (1132), Expect = e-121
 Identities = 214/244 (87%), Positives = 221/244 (90%)
 Frame = +1

Query: 4   GWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVC 183
           GWHDLV+KGF                  +DLV AR  P+EAYS+TYTHCEIHPSLILGVC
Sbjct: 140 GWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVC 199

Query: 184 ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL 363
           ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL
Sbjct: 200 ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL 259

Query: 364 HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKE 543
           HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKE
Sbjct: 260 HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKE 319

Query: 544 DFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTK 723
           DFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DD+QGQA+RYTK
Sbjct: 320 DFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYTK 379

Query: 724 RDHS 735
           RDHS
Sbjct: 380 RDHS 383


>emb|CAD91516.1| RNA polymerase II second largest subunit [Garrya elliptica]
          Length = 576

 Score =  440 bits (1132), Expect = e-121
 Identities = 212/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1   GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
           GGWHDLV+KGF                  +DL+ A+  P++AYSDTYTHCEIHPSLILGV
Sbjct: 134 GGWHDLVAKGFIEYIDTEEEETTMISMTINDLLSAKLNPEDAYSDTYTHCEIHPSLILGV 193

Query: 181 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
           CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 194 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 253

Query: 361 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
           LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 254 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 313

Query: 541 EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
           EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DD+QGQA+RYT
Sbjct: 314 EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYT 373

Query: 721 KRDHS 735
           KRDHS
Sbjct: 374 KRDHS 378


>gb|AAY85195.1| RNA polymerase II second largest subunit [Callistemon subulatus]
          Length = 952

 Score =  440 bits (1132), Expect = e-121
 Identities = 213/244 (87%), Positives = 222/244 (90%)
 Frame = +1

Query: 4    GWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVC 183
            GWHDLV+KGF                  +DLVQAR  P+EAYS+TYTHCEIHPSLILGVC
Sbjct: 552  GWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVC 611

Query: 184  ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL 363
            ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL
Sbjct: 612  ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL 671

Query: 364  HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKE 543
            HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKE
Sbjct: 672  HFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE 731

Query: 544  DFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYTK 723
            DFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DDAQGQA+RY++
Sbjct: 732  DFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQASRYSR 791

Query: 724  RDHS 735
            RDHS
Sbjct: 792  RDHS 795


>emb|CAD88602.1| RNA polymerase II second largest subunit [Alangium platanifolium]
          Length = 540

 Score =  440 bits (1131), Expect = e-121
 Identities = 212/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1   GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
           GGWHDLV+KGF                  +DLV AR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 139 GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPEEAYSETYTHCEIHPSLILGV 198

Query: 181 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
           CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 199 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 258

Query: 361 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
           LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 259 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 318

Query: 541 EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
           EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DD+QGQA+RY+
Sbjct: 319 EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYS 378

Query: 721 KRDHS 735
           +RDHS
Sbjct: 379 RRDHS 383


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score =  440 bits (1131), Expect = e-121
 Identities = 212/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  +DLVQAR  P++AYSDTYTHCEIHPSLILGV
Sbjct: 657  GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGV 716

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 717  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 776

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIV+IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 777  LHFRQLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 836

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQA RYT
Sbjct: 837  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYT 896

Query: 721  KRDHS 735
            +RDHS
Sbjct: 897  RRDHS 901


>emb|CAD89691.1| RNA polymerase II, second largest subunit [Escallonia sp. Oxelman
           2340]
          Length = 508

 Score =  439 bits (1130), Expect = e-121
 Identities = 213/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1   GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
           GGWHDLV+KG+                  +DLV AR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 76  GGWHDLVAKGYIEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGV 135

Query: 181 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
           CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 136 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEH 195

Query: 361 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
           LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 196 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 255

Query: 541 EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
           EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DDAQGQA+RY+
Sbjct: 256 EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQASRYS 315

Query: 721 KRDHS 735
           KRDHS
Sbjct: 316 KRDHS 320


>emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]
          Length = 543

 Score =  439 bits (1130), Expect = e-121
 Identities = 213/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1   GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
           GGWHDLV+KG+                  +DLV AR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 133 GGWHDLVAKGYIEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGV 192

Query: 181 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
           CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 193 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEH 252

Query: 361 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
           LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 253 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 312

Query: 541 EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
           EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DDAQGQA+RY+
Sbjct: 313 EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQASRYS 372

Query: 721 KRDHS 735
           KRDHS
Sbjct: 373 KRDHS 377


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1213

 Score =  439 bits (1130), Expect = e-121
 Identities = 212/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLVSKGF                  +DLVQAR  P+EAYSDTYTHCEIHPSLILGV
Sbjct: 676  GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGV 735

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 736  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 795

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 796  LHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 855

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P++ ++ QGQAARY+
Sbjct: 856  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQGQAARYS 915

Query: 721  KRDHS 735
            KRDHS
Sbjct: 916  KRDHS 920


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score =  439 bits (1129), Expect = e-121
 Identities = 212/245 (86%), Positives = 222/245 (90%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                   DL+QAR  P EAYSDTYTHCEIHPSLILGV
Sbjct: 662  GGWHDLVAKGFIEYIDTEEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGV 721

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 722  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 781

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 782  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 841

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQAARY+
Sbjct: 842  EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYS 901

Query: 721  KRDHS 735
            +RDHS
Sbjct: 902  RRDHS 906


>gb|AAS86833.1| RNA polymerase II second largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 549

 Score =  439 bits (1129), Expect = e-121
 Identities = 212/245 (86%), Positives = 221/245 (90%)
 Frame = +1

Query: 1   GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
           GGWHDLV+KGF                  +DLV AR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 139 GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGV 198

Query: 181 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
           CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 199 CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 258

Query: 361 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
           LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 259 LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 318

Query: 541 EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
           EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDV+IGKT+PIA D+AQG AARYT
Sbjct: 319 EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYT 378

Query: 721 KRDHS 735
           +RDHS
Sbjct: 379 RRDHS 383


>ref|XP_007025632.1| DNA-directed RNA polymerase family protein isoform 2 [Theobroma
            cacao] gi|508780998|gb|EOY28254.1| DNA-directed RNA
            polymerase family protein isoform 2 [Theobroma cacao]
          Length = 809

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/245 (86%), Positives = 223/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                  +DLVQAR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 304  GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGV 363

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 364  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 423

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 424  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 483

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQA+RY+
Sbjct: 484  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYS 543

Query: 721  KRDHS 735
            +RDHS
Sbjct: 544  RRDHS 548


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
            polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/245 (86%), Positives = 223/245 (91%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWHDLV+KGF                  +DLVQAR  P+EAYS+TYTHCEIHPSLILGV
Sbjct: 654  GGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGV 713

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 714  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 773

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 774  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 833

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI+ ++AQGQA+RY+
Sbjct: 834  EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYS 893

Query: 721  KRDHS 735
            +RDHS
Sbjct: 894  RRDHS 898


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score =  439 bits (1128), Expect = e-121
 Identities = 212/245 (86%), Positives = 221/245 (90%)
 Frame = +1

Query: 1    GGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGV 180
            GGWH+LV+KGF                  +DL+ A+  P EAYSDTYTHCEIHPSLILGV
Sbjct: 663  GGWHELVAKGFIEYIDTEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGV 722

Query: 181  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 360
            CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
Sbjct: 723  CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH 782

Query: 361  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVK 540
            LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVK
Sbjct: 783  LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK 842

Query: 541  EDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAGDDAQGQAARYT 720
            EDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKT+PI+ DDAQGQAARYT
Sbjct: 843  EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYT 902

Query: 721  KRDHS 735
            KRDHS
Sbjct: 903  KRDHS 907