BLASTX nr result

ID: Mentha22_contig00027070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00027070
         (359 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU46580.1| hypothetical protein MIMGU_mgv1a012642mg [Mimulus...   103   2e-20
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro...    64   3e-08
ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloro...    64   3e-08
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro...    64   3e-08
gb|AFK36773.1| unknown [Lotus japonicus]                               63   4e-08
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]            60   3e-07
ref|XP_006444066.1| hypothetical protein CICLE_v10021605mg [Citr...    59   7e-07
ref|XP_006444065.1| hypothetical protein CICLE_v10021605mg [Citr...    59   7e-07
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr...    59   7e-07
ref|XP_002302112.2| Ribosome recycling factor family protein [Po...    57   3e-06
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]       57   3e-06
emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]    57   3e-06
emb|CBI28691.3| unnamed protein product [Vitis vinifera]               57   4e-06
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ...    56   5e-06
ref|XP_007050599.1| Ribosome recycling factor isoform 3 [Theobro...    56   5e-06
ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobro...    56   5e-06
ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobro...    56   5e-06
ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloro...    56   5e-06
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...    56   5e-06

>gb|EYU46580.1| hypothetical protein MIMGU_mgv1a012642mg [Mimulus guttatus]
          Length = 244

 Score =  103 bits (257), Expect = 2e-20
 Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFKNACLWSASANYAHLQV-ATRGVSAKSLSI 217
           MATTFS  SH+R+V  AS  PK R S+PDF N   WSASANY  LQV A RG S K   +
Sbjct: 1   MATTFSPASHVRTVCYASNLPKNRLSVPDFGNVGCWSASANYVKLQVSAARGFSGKPFVV 60

Query: 218 KHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
           K T  KR+GV++CAT              V+E+MEKTI+NV++SFNS
Sbjct: 61  KQTWKKRIGVLKCATIEEIEAEKSMIEKAVKEKMEKTIDNVKTSFNS 107


>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
           tuberosum]
          Length = 267

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = +2

Query: 122 PDFKNACLWSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXX 301
           P   N   WSASANY+ L V  R +      +K +  KR G+VRCAT             
Sbjct: 33  PTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIEK 89

Query: 302 DVRERMEKTIENVRSSFNS 358
           DV+ERMEKT+E VRS+FNS
Sbjct: 90  DVKERMEKTVETVRSNFNS 108


>ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 2
           [Solanum lycopersicum]
          Length = 263

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = +2

Query: 122 PDFKNACLWSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXX 301
           P   N   WSASANY+ L V  R +      +K +  KR G+VRCAT             
Sbjct: 33  PTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIEK 89

Query: 302 DVRERMEKTIENVRSSFNS 358
           DV+ERMEKT+E VRS+FNS
Sbjct: 90  DVKERMEKTVETVRSNFNS 108


>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
           [Solanum lycopersicum]
          Length = 267

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = +2

Query: 122 PDFKNACLWSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXX 301
           P   N   WSASANY+ L V  R +      +K +  KR G+VRCAT             
Sbjct: 33  PTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIEK 89

Query: 302 DVRERMEKTIENVRSSFNS 358
           DV+ERMEKT+E VRS+FNS
Sbjct: 90  DVKERMEKTVETVRSNFNS 108


>gb|AFK36773.1| unknown [Lotus japonicus]
          Length = 231

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
 Frame = +2

Query: 44  ATTFSAVSHLRSVFSASIAPKTRPSLPD----FKNACLWSASANYAHLQVA-TRGVSAKS 208
           AT+FS  + +RS+F     PKT   LP+     K + + SASA+Y  L+++ T  +SAK 
Sbjct: 3   ATSFSPATPVRSIFQNP--PKTTLFLPESFYGVKRSSI-SASASYVTLKLSRTLTLSAKP 59

Query: 209 LSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
           + + H   +RMG+VR AT             DVR RMEKTIENVRS+FNS
Sbjct: 60  I-LSH---RRMGIVRAATMEEIEAEKKAIEKDVRNRMEKTIENVRSNFNS 105


>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
          Length = 278

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 14/120 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRP----SLPDF-----KNACL---WSASANYAHLQVA 184
           MAT+FS    L SV S SI P+  P    SLP+F      ++C+   W++S++Y  L+++
Sbjct: 1   MATSFSPTPTLPSVRS-SIFPQNPPKPLLSLPEFFRGGSNSSCVKRSWASSSSYVTLKLS 59

Query: 185 TR-GVSAKSLSIKHTVT-KRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
               VSA+ L  K T+  +RMG+VR AT             DV+ RME++IE+VR++FNS
Sbjct: 60  NAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIRMERSIESVRANFNS 119


>ref|XP_006444066.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
           gi|557546328|gb|ESR57306.1| hypothetical protein
           CICLE_v10021605mg [Citrus clementina]
          Length = 218

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSA-SIAPKTRPSLPDFKN------ACL--------WSASANYAHL 175
           MAT FS+   +RS+F   S  PK    LPD  +       C         WS++ANY+ L
Sbjct: 1   MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
                 +S K + ++    KR GVVRCAT             DV+ RME+TI+ VR++FN
Sbjct: 61  VK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116

Query: 356 S 358
           S
Sbjct: 117 S 117


>ref|XP_006444065.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
           gi|557546327|gb|ESR57305.1| hypothetical protein
           CICLE_v10021605mg [Citrus clementina]
          Length = 179

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSA-SIAPKTRPSLPDFKN------ACL--------WSASANYAHL 175
           MAT FS+   +RS+F   S  PK    LPD  +       C         WS++ANY+ L
Sbjct: 1   MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
                 +S K + ++    KR GVVRCAT             DV+ RME+TI+ VR++FN
Sbjct: 61  VK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116

Query: 356 S 358
           S
Sbjct: 117 S 117


>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
           gi|568852089|ref|XP_006479713.1| PREDICTED:
           ribosome-recycling factor, chloroplastic-like [Citrus
           sinensis] gi|557546326|gb|ESR57304.1| hypothetical
           protein CICLE_v10021605mg [Citrus clementina]
          Length = 276

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSA-SIAPKTRPSLPDFKN------ACL--------WSASANYAHL 175
           MAT FS+   +RS+F   S  PK    LPD  +       C         WS++ANY+ L
Sbjct: 1   MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
                 +S K + ++    KR GVVRCAT             DV+ RME+TI+ VR++FN
Sbjct: 61  VK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116

Query: 356 S 358
           S
Sbjct: 117 S 117


>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
           gi|550344331|gb|EEE81385.2| Ribosome recycling factor
           family protein [Populus trichocarpa]
          Length = 286

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = +2

Query: 143 LWSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERME 322
           LWS+SANY+ L+  +  +S K +++K  +  R GVVR AT             D + RME
Sbjct: 56  LWSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRME 115

Query: 323 KTIENVRSSFNS 358
           KTI+ +R++FNS
Sbjct: 116 KTIDTMRANFNS 127


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = +2

Query: 143 LWSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERME 322
           LWS+SANY+ L+  +  +S K +++K  +  R GVVR AT             D + RME
Sbjct: 56  LWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRME 115

Query: 323 KTIENVRSSFNS 358
           KTI+ +R++FNS
Sbjct: 116 KTIDTMRTNFNS 127


>emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
          Length = 222

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASI---------APKTRPSLPDFKNACLWSASANYAHLQVATRG 193
           MA TFS  + +R++F              P       +   A    ++ANY  L    R 
Sbjct: 1   MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYXRLGDGARE 60

Query: 194 VSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
            S K +  K    KR G+ RCAT             DV+ERMEKTIE VR++FNS
Sbjct: 61  YSGKLIVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNS 115


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASI---------APKTRPSLPDFKNACLWSASANYAHLQVATRG 193
           MA TFS  + +R++F              P       +   A    ++ANY  L    R 
Sbjct: 1   MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGARE 60

Query: 194 VSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
            S K    K    KR G+ RCAT             DV+ERMEKTIE VR++FNS
Sbjct: 61  YSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNS 115


>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/71 (40%), Positives = 42/71 (59%)
 Frame = +2

Query: 146 WSASANYAHLQVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEK 325
           W+A+ANY  ++V T   + K++ +     KR G ++CAT              V+ERMEK
Sbjct: 1   WTAAANYVKIKVGTGKFARKTVVLSQ---KRTGTLKCATMEEIEAEKSLIEKSVKERMEK 57

Query: 326 TIENVRSSFNS 358
           TIENV++SFNS
Sbjct: 58  TIENVKASFNS 68


>ref|XP_007050599.1| Ribosome recycling factor isoform 3 [Theobroma cacao]
           gi|508702860|gb|EOX94756.1| Ribosome recycling factor
           isoform 3 [Theobroma cacao]
          Length = 285

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFK---------------NACLWSASANYAHL 175
           MA  FS+ S + S+F  +  P      P                  N   WS++ANYA L
Sbjct: 1   MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
           +     +S K   +   + KR GV+RCAT             D + RMEKTIE VR++FN
Sbjct: 61  RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117

Query: 356 S 358
           S
Sbjct: 118 S 118


>ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
           gi|508702859|gb|EOX94755.1| Ribosome recycling factor
           isoform 2 [Theobroma cacao]
          Length = 300

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFK---------------NACLWSASANYAHL 175
           MA  FS+ S + S+F  +  P      P                  N   WS++ANYA L
Sbjct: 1   MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
           +     +S K   +   + KR GV+RCAT             D + RMEKTIE VR++FN
Sbjct: 61  RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117

Query: 356 S 358
           S
Sbjct: 118 S 118


>ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
           gi|508702858|gb|EOX94754.1| Ribosome recycling factor
           isoform 1 [Theobroma cacao]
          Length = 277

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFK---------------NACLWSASANYAHL 175
           MA  FS+ S + S+F  +  P      P                  N   WS++ANYA L
Sbjct: 1   MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60

Query: 176 QVATRGVSAKSLSIKHTVTKRMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFN 355
           +     +S K   +   + KR GV+RCAT             D + RMEKTIE VR++FN
Sbjct: 61  RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117

Query: 356 S 358
           S
Sbjct: 118 S 118


>ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 270

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFKNA-------------CLWSASANYAHLQV 181
           MAT FSA + +R     +  PK+  SL D+                C W +++NY  L  
Sbjct: 1   MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNR 60

Query: 182 ATRGVSAKSLSIKHTVTK-RMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
               +S + LS+   V K R  VVR AT             DV+ RMEKTI+ VRS+FNS
Sbjct: 61  QALVISTQ-LSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNS 119


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSLPDFKNA-------------CLWSASANYAHLQV 181
           MAT FSA + +R     +  PK+  SL D+                C W +++NY  L  
Sbjct: 1   MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNR 60

Query: 182 ATRGVSAKSLSIKHTVTK-RMGVVRCATXXXXXXXXXXXXXDVRERMEKTIENVRSSFNS 358
               +S + LS+   V K R  VVR AT             DV+ RMEKTI+ VRS+FNS
Sbjct: 61  QALVISTQ-LSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNS 119


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