BLASTX nr result
ID: Mentha22_contig00026830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00026830
(720 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABV65713.1| RNA polymerase beta'' subunit, partial (chloropla... 285 1e-74
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 283 3e-74
gb|ABV65716.1| RNA polymerase beta'' subunit, partial (chloropla... 283 3e-74
gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Orig... 282 9e-74
ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subun... 282 9e-74
sp|Q4VZP3.1|RPOC2_CUCSA RecName: Full=DNA-directed RNA polymeras... 282 9e-74
ref|YP_004841773.1| RNA polymerase beta'' subunit [Cucumis melo ... 282 9e-74
ref|YP_247589.2| RNA polymerase beta'' subunit [Cucumis sativus]... 282 9e-74
gb|ADO13865.1| RNA polymerase beta subunit [Eremosyne pectinata] 281 2e-73
gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis] 280 3e-73
gb|ADO13877.1| RNA polymerase beta subunit [Carpodetus sp. Johns... 280 4e-73
gb|ABV65784.1| RNA polymerase beta'' subunit, partial (chloropla... 280 4e-73
gb|AFK81463.1| RNA polymerase beta' subunit [Camellia taliensis] 280 5e-73
ref|YP_008520129.1| DNA-directed RNA polymerase beta'' subunit (... 280 5e-73
gb|ABV65701.1| RNA polymerase beta'' subunit, partial (chloropla... 280 5e-73
ref|YP_008963296.1| RNA polymerase beta' subunit [Camellia oleif... 279 6e-73
gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis v... 279 6e-73
ref|YP_008964857.1| RNA polymerase beta'' subunit (chloroplast) ... 279 6e-73
ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans... 279 6e-73
ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) ... 279 6e-73
>gb|ABV65713.1| RNA polymerase beta'' subunit, partial (chloroplast) [Bursera
simaruba]
Length = 1274
Score = 285 bits (728), Expect = 1e-74
Identities = 141/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 55 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 114
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 115 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 174
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R + S NR
Sbjct: 175 LTRRLVEVVQHIVVRRTDCGTIRGISVSPQNR 206
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta
subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 283 bits (725), Expect = 3e-74
Identities = 139/143 (97%), Positives = 139/143 (97%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 86 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 145
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 146 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 205
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 206 LTRRLVEVVQHIVVRRTDCGTVR 228
>gb|ABV65716.1| RNA polymerase beta'' subunit, partial (chloroplast) [Cynophalla
flexuosa]
Length = 1263
Score = 283 bits (725), Expect = 3e-74
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVH+MSFSGARGNAS
Sbjct: 51 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHMMSFSGARGNAS 110
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 111 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 170
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R + S NR
Sbjct: 171 LTRRLVEVVQHIVVRRTDCGTIRGISVSPQNR 202
>gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Origanum vulgare
subsp. vulgare]
Length = 1397
Score = 282 bits (721), Expect = 9e-74
Identities = 139/148 (93%), Positives = 140/148 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 86 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 145
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 146 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 205
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS 525
LTRRLVEVVQHIVVRRTDCGTV + S
Sbjct: 206 LTRRLVEVVQHIVVRRTDCGTVHSISVS 233
>ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subunit beta''-like [Cucumis
sativus]
Length = 326
Score = 282 bits (721), Expect = 9e-74
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 128 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 187
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 188 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 247
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R ++ S NR
Sbjct: 248 LTRRLVEVVQHIVVRRTDCGTIRGILVSPGNR 279
>sp|Q4VZP3.1|RPOC2_CUCSA RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|67511388|emb|CAJ00748.1| RNA polymerase beta'' chain
[Cucumis sativus] gi|74027091|gb|AAZ94641.1| RNA
polymerase beta II subunit [Cucumis sativus]
gi|115432794|gb|ABI97407.1| RNA polymerase beta' subunit
[Cucumis sativus] gi|115498293|gb|ABI98735.1| RNA
polymerase beta' subunit [Cucumis sativus]
Length = 1394
Score = 282 bits (721), Expect = 9e-74
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 86 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 145
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 146 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 205
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R ++ S NR
Sbjct: 206 LTRRLVEVVQHIVVRRTDCGTIRGILVSPGNR 237
>ref|YP_004841773.1| RNA polymerase beta'' subunit [Cucumis melo subsp. melo]
gi|344030481|gb|AEM76882.1| RNA polymerase beta''
subunit [Cucumis melo subsp. melo]
Length = 1396
Score = 282 bits (721), Expect = 9e-74
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 86 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 145
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 146 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 205
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R ++ S NR
Sbjct: 206 LTRRLVEVVQHIVVRRTDCGTIRGILVSPGNR 237
>ref|YP_247589.2| RNA polymerase beta'' subunit [Cucumis sativus]
gi|590000405|ref|YP_009004034.1| RNA polymerase beta'
subunit [Cucumis hystrix] gi|586598676|gb|AHJ61376.1|
RNA polymerase beta' subunit [Cucumis hystrix]
Length = 1390
Score = 282 bits (721), Expect = 9e-74
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R ++ S NR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTIRGILVSPGNR 233
>gb|ADO13865.1| RNA polymerase beta subunit [Eremosyne pectinata]
Length = 617
Score = 281 bits (719), Expect = 2e-73
Identities = 137/143 (95%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 69 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 128
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 129 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 188
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCG +R
Sbjct: 189 LTRRLVEVVQHIVVRRTDCGAIR 211
>gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis]
Length = 1250
Score = 280 bits (717), Expect = 3e-73
Identities = 136/143 (95%), Positives = 139/143 (97%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATS+YLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 41 LEKHHHCGNVHAVEKLRQSIEIWYATSDYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 100
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 101 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 160
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGT++
Sbjct: 161 LTRRLVEVVQHIVVRRTDCGTIQ 183
>gb|ADO13877.1| RNA polymerase beta subunit [Carpodetus sp. Johns 9563]
Length = 606
Score = 280 bits (716), Expect = 4e-73
Identities = 137/143 (95%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHHCGNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 72 LEKHHHCGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 131
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLM DPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRT+DAGY
Sbjct: 132 QVHQLVGMRGLMLDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTADAGY 191
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 192 LTRRLVEVVQHIVVRRTDCGTVR 214
>gb|ABV65784.1| RNA polymerase beta'' subunit, partial (chloroplast) [Thymelaea
sanamunda]
Length = 1285
Score = 280 bits (716), Expect = 4e-73
Identities = 141/154 (91%), Positives = 142/154 (92%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 52 LEKHHHFGNVHAVEKLRQSIEIWYATSEYLRQEMNLNFRMTDPFNPVHIMSFSGARGNAS 111
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 112 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 171
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNRGL 543
LTRRLVEVVQHIVVRRTDCGT R + S NR L
Sbjct: 172 LTRRLVEVVQHIVVRRTDCGTTRGISASPRNRTL 205
>gb|AFK81463.1| RNA polymerase beta' subunit [Camellia taliensis]
Length = 1372
Score = 280 bits (715), Expect = 5e-73
Identities = 139/148 (93%), Positives = 140/148 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS 525
LTRRLVEVVQHIVVRRTDCGTVR + S
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVRSISVS 229
>ref|YP_008520129.1| DNA-directed RNA polymerase beta'' subunit (chloroplast) [Camellia
taliensis] gi|537362673|gb|AGU44478.1| DNA-directed RNA
polymerase beta'' subunit (chloroplast) [Camellia
taliensis] gi|537362943|gb|AGU44745.1| DNA-directed RNA
polymerase beta'' subunit (chloroplast) [Camellia
taliensis]
Length = 1376
Score = 280 bits (715), Expect = 5e-73
Identities = 139/148 (93%), Positives = 140/148 (94%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 86 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 145
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 146 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 205
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS 525
LTRRLVEVVQHIVVRRTDCGTVR + S
Sbjct: 206 LTRRLVEVVQHIVVRRTDCGTVRSISVS 233
>gb|ABV65701.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ailanthus
altissima]
Length = 1279
Score = 280 bits (715), Expect = 5e-73
Identities = 140/152 (92%), Positives = 142/152 (93%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 53 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 112
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 113 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 172
Query: 442 LTRRLVEVVQHIVVRRTDCGTVRFLICS*FNR 537
LTRRLVEVVQHIVVRRTDCGT+R + S NR
Sbjct: 173 LTRRLVEVVQHIVVRRTDCGTLRGISVSPQNR 204
>ref|YP_008963296.1| RNA polymerase beta' subunit [Camellia oleifera]
gi|388893285|gb|AFK81376.1| RNA polymerase beta' subunit
[Camellia oleifera]
Length = 1374
Score = 279 bits (714), Expect = 6e-73
Identities = 138/143 (96%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVR 224
>gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis var. assamica]
Length = 1374
Score = 279 bits (714), Expect = 6e-73
Identities = 138/143 (96%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVR 224
>ref|YP_008964857.1| RNA polymerase beta'' subunit (chloroplast) [Schwalbea americana]
gi|560176690|emb|CDJ38609.1| RNA polymerase beta''
subunit (chloroplast) [Schwalbea americana]
Length = 1382
Score = 279 bits (714), Expect = 6e-73
Identities = 138/143 (96%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVR 224
>ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans]
gi|558697185|gb|AHA84940.1| RNA polymerase beta''
subunit [Ajuga reptans]
Length = 1377
Score = 279 bits (714), Expect = 6e-73
Identities = 138/143 (96%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVR 224
>ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis] gi|557136853|emb|CDI43908.1| RNA
polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis]
Length = 1368
Score = 279 bits (714), Expect = 6e-73
Identities = 138/143 (96%), Positives = 138/143 (96%)
Frame = +1
Query: 82 LEKHHHCGNVHTVEKLRQSIEIWYATSEYLRQEMNHNFRMTDPFNPVHIMSFSGARGNAS 261
LEKHHH GNVH VEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNAS
Sbjct: 82 LEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNAS 141
Query: 262 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYRARKGVVDTVVRTSDAGY 441
QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCY ARKGVVDT VRTSDAGY
Sbjct: 142 QVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGY 201
Query: 442 LTRRLVEVVQHIVVRRTDCGTVR 510
LTRRLVEVVQHIVVRRTDCGTVR
Sbjct: 202 LTRRLVEVVQHIVVRRTDCGTVR 224