BLASTX nr result

ID: Mentha22_contig00020748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00020748
         (803 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citr...    58   4e-06
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...    58   4e-06
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...    58   5e-06
ref|XP_002316152.1| pentatricopeptide repeat-containing family p...    58   5e-06
ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Caps...    57   8e-06

>ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
           gi|568881878|ref|XP_006493776.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Citrus sinensis]
           gi|557524134|gb|ESR35501.1| hypothetical protein
           CICLE_v10004323mg [Citrus clementina]
          Length = 827

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125 FSERSLVREYCSGKNG-GEDSNNWTGEIDYLDEAGSVIYSGK 3
           F + + VR YCSGK+G GE  N WT EI+YLDE+GSVIY+GK
Sbjct: 66  FRKPNYVRSYCSGKSGDGEKCNEWTEEIEYLDESGSVIYTGK 107


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 23/38 (60%), Positives = 33/38 (86%)
 Frame = -1

Query: 116 RSLVREYCSGKNGGEDSNNWTGEIDYLDEAGSVIYSGK 3
           RS+VR +CS K+GG +S+ WT E++YLDE+GSV++SGK
Sbjct: 74  RSIVRRFCSEKSGGSESSGWTEEVEYLDESGSVLHSGK 111


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = -1

Query: 125 FSERSLVREYCSGKNGGEDSNNWTGEIDYLDEAGSVIYSGK 3
           F+ RS  R YCSGK  G     WT +I+YLDE+GSVI+SGK
Sbjct: 62  FNNRSFTRSYCSGKESGNGGREWTEDIEYLDESGSVIFSGK 102


>ref|XP_002316152.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865192|gb|EEF02323.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 785

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 113 SLVREYCSGKNGGEDSNNWTGEIDYLDEAGSVIYSGK 3
           S VR YC+GKNG   S  WT +I+YLDE+GSVIYSGK
Sbjct: 29  SFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGK 65


>ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Capsella rubella]
           gi|482569125|gb|EOA33313.1| hypothetical protein
           CARUB_v10021690mg [Capsella rubella]
          Length = 836

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = -1

Query: 155 QDSRFCITTAFSERSLVREYCSGKNGGEDSNNWTGEIDYLDEAGSVIYSGK 3
           +DS F +  A   RS+VR +CS K G  +S+ WT E++YLDE+GSV++SGK
Sbjct: 66  RDSDF-VGLAKQSRSIVRRFCSEKGGSSESSGWTEEVEYLDESGSVLHSGK 115


Top