BLASTX nr result

ID: Mentha22_contig00017792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00017792
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    62   8e-08
gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    61   1e-07
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    61   2e-07
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                61   2e-07

>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   ERAVLTRNGSYAPTLXXXXXXXXXXXXXXXXXXXXXXXFYSKMDKSEPEAKSDRWAI--- 171
           +RA+L R  S A TL                        + ++D+ +PEAKSDRW +   
Sbjct: 279 DRALLNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIA 338

Query: 172 ---FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLSSFKCLEPKTADETGLMSEDRNKSP 333
              FTRG SM+S KV                 +K+ SFKCLEPK  DE GL++ D  +SP
Sbjct: 339 PPFFTRGSSMKSPKVRADNEEASTSRSNVKVAVKMPSFKCLEPK-GDEPGLLANDSARSP 397

Query: 334 V 336
           V
Sbjct: 398 V 398


>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 148 AKSDRWAIFTRGLSMRSTKVTXXXXXXXXXXXPPMKLSSFKCLEPKTADETGLMSE 315
           AKSDRWA FTR LSM+S KV            P +K+ SFKCLEPK  DETGL+++
Sbjct: 321 AKSDRWAFFTRALSMKSPKVVAEGGDGGSTT-PVVKMPSFKCLEPKAVDETGLIAD 375


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   ERAVLTRNGSYAPTLXXXXXXXXXXXXXXXXXXXXXXXFYSKMDKSEPEAKSDRWAI--- 171
           +RA+L R  S A TL                        + ++D+ +PE KSDRW +   
Sbjct: 279 DRALLNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGARSFKRIDRFDPETKSDRWFLKIA 338

Query: 172 ---FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLSSFKCLEPKTADETGLMSEDRNKSP 333
              FTRG SM+S KV                 +KL SF+CLEPK  DE GLM+ D  +SP
Sbjct: 339 PPFFTRGSSMKSPKVRADNEEASTSRSNMKVAVKLPSFQCLEPK-GDEPGLMANDSARSP 397

Query: 334 V 336
           V
Sbjct: 398 V 398


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   ERAVLTRNGSYAPTLXXXXXXXXXXXXXXXXXXXXXXXFYSKMDKSEPEAKSDRWAI--- 171
           +RA+L R  S A TL                        + ++D+ +PEAKSDRW +   
Sbjct: 35  DRALLNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIA 94

Query: 172 ---FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLSSFKCLEPKTADETGLMSEDRNKSP 333
              FTRG SM+S K+                 +K+ SFKCLEPK  DE GL++ D  +SP
Sbjct: 95  PPFFTRGSSMKSPKLRADNEEASTSRSNVKVAVKMPSFKCLEPK-GDEPGLLANDSARSP 153

Query: 334 V 336
           V
Sbjct: 154 V 154


Top