BLASTX nr result
ID: Mentha22_contig00017531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00017531
(323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU22090.1| hypothetical protein MIMGU_mgv1a004481mg [Mimulus... 85 5e-25
ref|XP_007137108.1| hypothetical protein PHAVU_009G100200g [Phas... 80 9e-24
ref|XP_007222243.1| hypothetical protein PRUPE_ppa003875mg [Prun... 78 1e-23
ref|XP_004246077.1| PREDICTED: cryptochrome DASH, chloroplastic/... 77 3e-22
ref|XP_004246078.1| PREDICTED: cryptochrome DASH, chloroplastic/... 77 3e-22
gb|EXB94223.1| Cryptochrome DASH [Morus notabilis] 75 6e-22
ref|XP_006382193.1| cryptochrome dash family protein [Populus tr... 73 1e-21
ref|XP_002527975.1| DNA photolyase, putative [Ricinus communis] ... 73 8e-21
ref|XP_004162492.1| PREDICTED: cryptochrome DASH, chloroplastic/... 68 1e-20
ref|XP_004136321.1| PREDICTED: cryptochrome DASH, chloroplastic/... 68 1e-20
ref|XP_007011552.1| DNA photolyase, putative isoform 1 [Theobrom... 71 1e-20
ref|XP_007011555.1| DNA photolyase, putative isoform 4 [Theobrom... 71 1e-20
ref|XP_007011553.1| DNA photolyase, putative isoform 2 [Theobrom... 71 1e-20
sp|Q84KJ5.2|CRYD_ARATH RecName: Full=Cryptochrome DASH, chloropl... 73 4e-20
ref|NP_568461.2| cryptochrome DASH [Arabidopsis thaliana] gi|119... 73 4e-20
pdb|2J4D|A Chain A, Cryptochrome 3 From Arabidopsis Thaliana gi|... 73 4e-20
pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex 73 4e-20
sp|Q651U1.1|CRYD_ORYSJ RecName: Full=Cryptochrome DASH, chloropl... 69 5e-20
gb|EEE66166.1| hypothetical protein OsJ_22248 [Oryza sativa Japo... 69 5e-20
ref|NP_001058278.1| Os06g0661800 [Oryza sativa Japonica Group] g... 69 5e-20
>gb|EYU22090.1| hypothetical protein MIMGU_mgv1a004481mg [Mimulus guttatus]
Length = 525
Score = 85.1 bits (209), Expect(2) = 5e-25
Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLK--VVHKPRNATKLELIWGCTMYHIDDLPFDSTSLPD 7
VY QKE CS E+NVER +S NL K VV +TKLELIWGCTMYH+DDLPFD TSLPD
Sbjct: 146 VYVQKETCSEEINVERRVSQNLQKEFVV-----STKLELIWGCTMYHVDDLPFDCTSLPD 200
Query: 6 IY 1
+Y
Sbjct: 201 VY 202
Score = 55.1 bits (131), Expect(2) = 5e-25
Identities = 31/48 (64%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -2
Query: 319 VSPKL-EAFDFFLVCVFGALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
+ P+L A FF GALRAQFL ECL DLK NL KRGLNLLIQ+G
Sbjct: 81 IDPRLFGATHFFGFPKTGALRAQFLTECLADLKTNLMKRGLNLLIQRG 128
>ref|XP_007137108.1| hypothetical protein PHAVU_009G100200g [Phaseolus vulgaris]
gi|561010195|gb|ESW09102.1| hypothetical protein
PHAVU_009G100200g [Phaseolus vulgaris]
Length = 591
Score = 80.1 bits (196), Expect(3) = 9e-24
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 9/69 (13%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRNA---------TKLELIWGCTMYHIDDLPF 28
VYAQKE CS ELNVERL+ L + V P + TKL+L+WG TMYH+DDLPF
Sbjct: 193 VYAQKETCSEELNVERLVMGGLKQAVTSPEESSGVTVSNKITKLQLVWGTTMYHLDDLPF 252
Query: 27 DSTSLPDIY 1
D++SLPD+Y
Sbjct: 253 DASSLPDMY 261
Score = 54.7 bits (130), Expect(3) = 9e-24
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFL+ECLVDL++NL K+GLNLL+Q G
Sbjct: 145 GALRAQFLLECLVDLRKNLMKKGLNLLVQHG 175
Score = 21.2 bits (43), Expect(3) = 9e-24
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 139 FGFPKTGAL 147
>ref|XP_007222243.1| hypothetical protein PRUPE_ppa003875mg [Prunus persica]
gi|462419179|gb|EMJ23442.1| hypothetical protein
PRUPE_ppa003875mg [Prunus persica]
Length = 543
Score = 77.8 bits (190), Expect(3) = 1e-23
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVV----------HKPRNATKLELIWGCTMYHIDDLP 31
VYAQKE CS ELNVERL+ L +VV N KL+L+WG TMYHIDDLP
Sbjct: 145 VYAQKETCSEELNVERLVRKGLQRVVLPLSSAQSSGPSSTNNPKLQLLWGTTMYHIDDLP 204
Query: 30 FDSTSLPDIY 1
FD+ SLPD+Y
Sbjct: 205 FDTLSLPDVY 214
Score = 56.6 bits (135), Expect(3) = 1e-23
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFLIECL DLK+NL KRGLNLLIQ G
Sbjct: 97 GALRAQFLIECLADLKKNLMKRGLNLLIQHG 127
Score = 21.2 bits (43), Expect(3) = 1e-23
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 91 FGFPKTGAL 99
>ref|XP_004246077.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
isoform 1 [Solanum lycopersicum]
Length = 580
Score = 77.4 bits (189), Expect(2) = 3e-22
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR----------NATKLELIWGCTMYHIDDLP 31
VYA KE CS E+ VE++++ NL K+V N TKLEL+WG TMYHIDDLP
Sbjct: 177 VYAHKETCSEEVKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLP 236
Query: 30 FDSTSLPDIY 1
FD SLPD+Y
Sbjct: 237 FDCESLPDVY 246
Score = 53.5 bits (127), Expect(2) = 3e-22
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQF+IECL DLKRNL KRGL+LLIQ G
Sbjct: 129 GALRAQFIIECLNDLKRNLVKRGLDLLIQHG 159
>ref|XP_004246078.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
isoform 2 [Solanum lycopersicum]
gi|110825715|sp|Q38JU2.2|CRYD_SOLLC RecName:
Full=Cryptochrome DASH, chloroplastic/mitochondrial;
AltName: Full=Cryptochrome-3; Flags: Precursor
gi|98467788|gb|ABB01166.2| cryptochrome 3 [Solanum
lycopersicum]
Length = 577
Score = 77.4 bits (189), Expect(2) = 3e-22
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR----------NATKLELIWGCTMYHIDDLP 31
VYA KE CS E+ VE++++ NL K+V N TKLEL+WG TMYHIDDLP
Sbjct: 177 VYAHKETCSEEVKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLP 236
Query: 30 FDSTSLPDIY 1
FD SLPD+Y
Sbjct: 237 FDCESLPDVY 246
Score = 53.5 bits (127), Expect(2) = 3e-22
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQF+IECL DLKRNL KRGL+LLIQ G
Sbjct: 129 GALRAQFIIECLNDLKRNLVKRGLDLLIQHG 159
>gb|EXB94223.1| Cryptochrome DASH [Morus notabilis]
Length = 601
Score = 74.7 bits (182), Expect(3) = 6e-22
Identities = 40/70 (57%), Positives = 47/70 (67%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVV--------HKPRNAT--KLELIWGCTMYHIDDLP 31
VYAQKE CS ELNVE L+S L KVV ++P + KL L+WG TMYHIDDLP
Sbjct: 194 VYAQKETCSEELNVETLVSKGLQKVVLQSSSGQTNRPSSTKNPKLHLVWGTTMYHIDDLP 253
Query: 30 FDSTSLPDIY 1
F + SLPD+Y
Sbjct: 254 FYANSLPDVY 263
Score = 53.9 bits (128), Expect(3) = 6e-22
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFL+ECL DL++NL KRGLNLLIQ G
Sbjct: 146 GALRAQFLMECLADLQKNLMKRGLNLLIQHG 176
Score = 21.2 bits (43), Expect(3) = 6e-22
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 140 FGFPKTGAL 148
>ref|XP_006382193.1| cryptochrome dash family protein [Populus trichocarpa]
gi|550337348|gb|ERP59990.1| cryptochrome dash family
protein [Populus trichocarpa]
Length = 567
Score = 72.8 bits (177), Expect(3) = 1e-21
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 11/71 (15%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR-----------NATKLELIWGCTMYHIDDL 34
VYAQKE CS E+NVE+L+S L+ VH P N+ L+L+WG TMYH+DDL
Sbjct: 150 VYAQKETCSEEVNVEKLVS-KALRRVHLPHSTGRSTSQGSANSPTLQLVWGGTMYHLDDL 208
Query: 33 PFDSTSLPDIY 1
PF + S+PD+Y
Sbjct: 209 PFSTNSIPDVY 219
Score = 52.4 bits (124), Expect(3) = 1e-21
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
G LR QF++ECLVDLK+NL KRGLNLLI+ G
Sbjct: 102 GGLRGQFIVECLVDLKKNLMKRGLNLLIRHG 132
Score = 23.5 bits (49), Expect(3) = 1e-21
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTGG+
Sbjct: 96 FGFPKTGGL 104
>ref|XP_002527975.1| DNA photolyase, putative [Ricinus communis]
gi|223532601|gb|EEF34387.1| DNA photolyase, putative
[Ricinus communis]
Length = 576
Score = 73.2 bits (178), Expect(2) = 8e-21
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLIS-----INLLKVVHKPRNATKLELIWGCTMYHIDDLPFDSTS 16
VYAQKE CS EL VERL+S +NL K + KL+L+WG TMYHIDDLPF++ +
Sbjct: 182 VYAQKETCSEELIVERLVSKALQRVNLPPSPDKFTSQPKLQLVWGSTMYHIDDLPFNANN 241
Query: 15 LPDIY 1
+PD+Y
Sbjct: 242 IPDVY 246
Score = 52.8 bits (125), Expect(2) = 8e-21
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFLIECL DLK NL KRGLNL I+ G
Sbjct: 134 GALRAQFLIECLADLKNNLMKRGLNLFIRHG 164
>ref|XP_004162492.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 549
Score = 67.8 bits (164), Expect(2) = 1e-20
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 12/72 (16%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRN------------ATKLELIWGCTMYHIDD 37
V+AQ E CS EL VE+++S L VV P + + +L+WG TMYHIDD
Sbjct: 149 VFAQMETCSEELYVEKMVSKGLKTVVLSPTSEKSASAKSSAARSPTFQLVWGTTMYHIDD 208
Query: 36 LPFDSTSLPDIY 1
LPFD+ SLPD+Y
Sbjct: 209 LPFDTNSLPDVY 220
Score = 57.8 bits (138), Expect(2) = 1e-20
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Frame = -2
Query: 319 VSPKLEAFDFFLVCVFG-----ALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
V P+L F C FG ALRAQF++ECL DLKRNL+KRGLNLLIQ G
Sbjct: 84 VDPRL----FGSTCYFGFPKTGALRAQFIVECLADLKRNLTKRGLNLLIQHG 131
>ref|XP_004136321.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 549
Score = 67.8 bits (164), Expect(2) = 1e-20
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 12/72 (16%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRN------------ATKLELIWGCTMYHIDD 37
V+AQ E CS EL VE+++S L VV P + + +L+WG TMYHIDD
Sbjct: 149 VFAQMETCSEELYVEKMVSKGLKTVVLSPTSEKSASAKSSAARSPTFQLVWGTTMYHIDD 208
Query: 36 LPFDSTSLPDIY 1
LPFD+ SLPD+Y
Sbjct: 209 LPFDTNSLPDVY 220
Score = 57.8 bits (138), Expect(2) = 1e-20
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Frame = -2
Query: 319 VSPKLEAFDFFLVCVFG-----ALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
V P+L F C FG ALRAQF++ECL DLKRNL+KRGLNLLIQ G
Sbjct: 84 VDPRL----FGSTCYFGFPKTGALRAQFIVECLADLKRNLTKRGLNLLIQHG 131
>ref|XP_007011552.1| DNA photolyase, putative isoform 1 [Theobroma cacao]
gi|590571297|ref|XP_007011554.1| DNA photolyase,
putative isoform 1 [Theobroma cacao]
gi|508781915|gb|EOY29171.1| DNA photolyase, putative
isoform 1 [Theobroma cacao] gi|508781917|gb|EOY29173.1|
DNA photolyase, putative isoform 1 [Theobroma cacao]
Length = 582
Score = 70.9 bits (172), Expect(3) = 1e-20
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR--NAT--------KLELIWGCTMYHIDDLP 31
VYA KE CS EL VERL++ L VV P N+T KLELIWG TMYH+DDLP
Sbjct: 185 VYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLDDLP 244
Query: 30 FDSTSLPDIY 1
+SLPD+Y
Sbjct: 245 ISISSLPDVY 254
Score = 53.1 bits (126), Expect(3) = 1e-20
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQF+IECL DLK+NL K+GL+LLIQ+G
Sbjct: 137 GALRAQFIIECLADLKKNLMKKGLDLLIQRG 167
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 131 FGFPKTGAL 139
>ref|XP_007011555.1| DNA photolyase, putative isoform 4 [Theobroma cacao]
gi|508781918|gb|EOY29174.1| DNA photolyase, putative
isoform 4 [Theobroma cacao]
Length = 513
Score = 70.9 bits (172), Expect(3) = 1e-20
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR--NAT--------KLELIWGCTMYHIDDLP 31
VYA KE CS EL VERL++ L VV P N+T KLELIWG TMYH+DDLP
Sbjct: 185 VYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLDDLP 244
Query: 30 FDSTSLPDIY 1
+SLPD+Y
Sbjct: 245 ISISSLPDVY 254
Score = 53.1 bits (126), Expect(3) = 1e-20
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQF+IECL DLK+NL K+GL+LLIQ+G
Sbjct: 137 GALRAQFIIECLADLKKNLMKKGLDLLIQRG 167
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 131 FGFPKTGAL 139
>ref|XP_007011553.1| DNA photolyase, putative isoform 2 [Theobroma cacao]
gi|508781916|gb|EOY29172.1| DNA photolyase, putative
isoform 2 [Theobroma cacao]
Length = 474
Score = 70.9 bits (172), Expect(3) = 1e-20
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPR--NAT--------KLELIWGCTMYHIDDLP 31
VYA KE CS EL VERL++ L VV P N+T KLELIWG TMYH+DDLP
Sbjct: 149 VYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLDDLP 208
Query: 30 FDSTSLPDIY 1
+SLPD+Y
Sbjct: 209 ISISSLPDVY 218
Score = 53.1 bits (126), Expect(3) = 1e-20
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQF+IECL DLK+NL K+GL+LLIQ+G
Sbjct: 101 GALRAQFIIECLADLKKNLMKKGLDLLIQRG 131
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 95 FGFPKTGAL 103
>sp|Q84KJ5.2|CRYD_ARATH RecName: Full=Cryptochrome DASH, chloroplastic/mitochondrial;
AltName: Full=Cryptochrome-3; Flags: Precursor
Length = 569
Score = 73.2 bits (178), Expect(2) = 4e-20
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRNATKLELIWGCTMYHIDDLPFDSTSLPDIY 1
V+A KE CS E++VERL++ L +V N+TKLELIWG TMYH DDLPFD LPD+Y
Sbjct: 183 VFAHKETCSEEVDVERLVNQGLKRV----GNSTKLELIWGSTMYHKDDLPFDVFDLPDVY 238
Score = 50.4 bits (119), Expect(2) = 4e-20
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2
Query: 292 FFLVCVFGALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
FF GALR FL+ECLVDL++NL KRGLNLLI+ G
Sbjct: 128 FFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSG 165
>ref|NP_568461.2| cryptochrome DASH [Arabidopsis thaliana] gi|119390180|pdb|2IJG|X
Chain X, Crystal Structure Of Cryptochrome 3 From
Arabidopsis Thaliana gi|238828067|pdb|2VTB|A Chain A,
Structure Of Cryptochrome 3 - Dna Complex
gi|238828069|pdb|2VTB|C Chain C, Structure Of
Cryptochrome 3 - Dna Complex gi|238828070|pdb|2VTB|D
Chain D, Structure Of Cryptochrome 3 - Dna Complex
gi|238828071|pdb|2VTB|E Chain E, Structure Of
Cryptochrome 3 - Dna Complex gi|238828072|pdb|2VTB|F
Chain F, Structure Of Cryptochrome 3 - Dna Complex
gi|18086429|gb|AAL57669.1| AT5g24850/F6A4_60
[Arabidopsis thaliana] gi|20857182|gb|AAM26705.1|
AT5g24850/F6A4_60 [Arabidopsis thaliana]
gi|332005986|gb|AED93369.1| cryptochrome DASH
[Arabidopsis thaliana]
Length = 526
Score = 73.2 bits (178), Expect(2) = 4e-20
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRNATKLELIWGCTMYHIDDLPFDSTSLPDIY 1
V+A KE CS E++VERL++ L +V N+TKLELIWG TMYH DDLPFD LPD+Y
Sbjct: 140 VFAHKETCSEEVDVERLVNQGLKRV----GNSTKLELIWGSTMYHKDDLPFDVFDLPDVY 195
Score = 50.4 bits (119), Expect(2) = 4e-20
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2
Query: 292 FFLVCVFGALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
FF GALR FL+ECLVDL++NL KRGLNLLI+ G
Sbjct: 85 FFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSG 122
>pdb|2J4D|A Chain A, Cryptochrome 3 From Arabidopsis Thaliana
gi|150261313|pdb|2J4D|B Chain B, Cryptochrome 3 From
Arabidopsis Thaliana gi|28971609|dbj|BAC65244.1|
cryptochrome dash [Arabidopsis thaliana]
Length = 525
Score = 73.2 bits (178), Expect(2) = 4e-20
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRNATKLELIWGCTMYHIDDLPFDSTSLPDIY 1
V+A KE CS E++VERL++ L +V N+TKLELIWG TMYH DDLPFD LPD+Y
Sbjct: 139 VFAHKETCSEEVDVERLVNQGLKRV----GNSTKLELIWGSTMYHKDDLPFDVFDLPDVY 194
Score = 50.4 bits (119), Expect(2) = 4e-20
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2
Query: 292 FFLVCVFGALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
FF GALR FL+ECLVDL++NL KRGLNLLI+ G
Sbjct: 84 FFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSG 121
>pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex
Length = 525
Score = 73.2 bits (178), Expect(2) = 4e-20
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVVHKPRNATKLELIWGCTMYHIDDLPFDSTSLPDIY 1
V+A KE CS E++VERL++ L +V N+TKLELIWG TMYH DDLPFD LPD+Y
Sbjct: 140 VFAHKETCSEEVDVERLVNQGLKRV----GNSTKLELIWGSTMYHKDDLPFDVFDLPDVY 195
Score = 50.4 bits (119), Expect(2) = 4e-20
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2
Query: 292 FFLVCVFGALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
FF GALR FL+ECLVDL++NL KRGLNLLI+ G
Sbjct: 85 FFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSG 122
>sp|Q651U1.1|CRYD_ORYSJ RecName: Full=Cryptochrome DASH, chloroplastic/mitochondrial;
Flags: Precursor gi|52075904|dbj|BAD45850.1| putative
cryptochrome dash [Oryza sativa Japonica Group]
gi|52077386|dbj|BAD46426.1| putative cryptochrome dash
[Oryza sativa Japonica Group]
Length = 582
Score = 69.3 bits (168), Expect(3) = 5e-20
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVV---------HKPRNATKLELIWGCTMYHIDDLPF 28
VYA KE CS EL VE L+ L +VV KPRN KL+LIWG T+YH+DDLPF
Sbjct: 184 VYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNP-KLQLIWGATLYHVDDLPF 242
Query: 27 DSTSLPDIY 1
+LPD+Y
Sbjct: 243 SVNNLPDVY 251
Score = 52.8 bits (125), Expect(3) = 5e-20
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFLIECL DLKRNL+K+GL+LLI+ G
Sbjct: 136 GALRAQFLIECLEDLKRNLTKQGLDLLIRHG 166
Score = 21.2 bits (43), Expect(3) = 5e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 130 FGFPKTGAL 138
>gb|EEE66166.1| hypothetical protein OsJ_22248 [Oryza sativa Japonica Group]
Length = 547
Score = 69.3 bits (168), Expect(3) = 5e-20
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVV---------HKPRNATKLELIWGCTMYHIDDLPF 28
VYA KE CS EL VE L+ L +VV KPRN KL+LIWG T+YH+DDLPF
Sbjct: 149 VYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNP-KLQLIWGATLYHVDDLPF 207
Query: 27 DSTSLPDIY 1
+LPD+Y
Sbjct: 208 SVNNLPDVY 216
Score = 52.8 bits (125), Expect(3) = 5e-20
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFLIECL DLKRNL+K+GL+LLI+ G
Sbjct: 101 GALRAQFLIECLEDLKRNLTKQGLDLLIRHG 131
Score = 21.2 bits (43), Expect(3) = 5e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 95 FGFPKTGAL 103
>ref|NP_001058278.1| Os06g0661800 [Oryza sativa Japonica Group]
gi|113596318|dbj|BAF20192.1| Os06g0661800 [Oryza sativa
Japonica Group]
Length = 547
Score = 69.3 bits (168), Expect(3) = 5e-20
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Frame = -3
Query: 180 VYAQKEMCSGELNVERLISINLLKVV---------HKPRNATKLELIWGCTMYHIDDLPF 28
VYA KE CS EL VE L+ L +VV KPRN KL+LIWG T+YH+DDLPF
Sbjct: 149 VYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNP-KLQLIWGATLYHVDDLPF 207
Query: 27 DSTSLPDIY 1
+LPD+Y
Sbjct: 208 SVNNLPDVY 216
Score = 52.8 bits (125), Expect(3) = 5e-20
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 271 GALRAQFLIECLVDLKRNLSKRGLNLLIQQG 179
GALRAQFLIECL DLKRNL+K+GL+LLI+ G
Sbjct: 101 GALRAQFLIECLEDLKRNLTKQGLDLLIRHG 131
Score = 21.2 bits (43), Expect(3) = 5e-20
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 323 FGFPKTGGI 297
FGFPKTG +
Sbjct: 95 FGFPKTGAL 103