BLASTX nr result

ID: Mentha22_contig00015012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00015012
         (720 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    67   5e-09
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    62   1e-07
ref|XP_006577420.1| PREDICTED: putative ribonuclease H protein A...    58   4e-06
ref|XP_006381710.1| hypothetical protein POPTR_0006s16215g [Popu...    58   4e-06

>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = -3

Query: 661 CVLCSSADETHDHLFFKCEKAVAVWSEICSWLRCRNQMTTIPSAVRRFQREKAGSGIVRK 482
           C LC +  ++H HLFF C  ++ VW+ I  W+    Q  ++   +      +A SG   K
Sbjct: 356 CPLCRTKAKSHAHLFFSCRISLQVWANIRDWIPLHRQTISLQCTINSRICGRATSGTWGK 415

Query: 481 AKWLALGATIQYLWQARNLSYVEKKPFAASHVIKEIKLDVYR 356
            + LAL   +   W +RNL   E  PF+  ++I +IK  VY+
Sbjct: 416 FRCLALAIAVYCTWISRNLLLFENSPFSVINIINKIKFLVYK 457


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/101 (28%), Positives = 50/101 (49%)
 Frame = -3

Query: 661 CVLCSSADETHDHLFFKCEKAVAVWSEICSWLRCRNQMTTIPSAVRRFQREKAGSGIVRK 482
           CVLC+  +ETH HLFF C+ A AVW  +  W+      +   S ++  Q     +  + +
Sbjct: 78  CVLCTKENETHSHLFFSCDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNGMHQ 137

Query: 481 AKWLALGATIQYLWQARNLSYVEKKPFAASHVIKEIKLDVY 359
           A  + L  T+  +W+ RN    +    +   ++ +IK+D Y
Sbjct: 138 AHRMVLSETLYVIWKERNDRKFQNCYRSVQQLLNQIKMDAY 178


>ref|XP_006577420.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 597

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
 Frame = -3

Query: 661 CVLCSSADETHDHLFFKCEKAVAVWSEICSWLRCRNQMTTIPSAVRRFQREKAGSGIVRK 482
           C LC    E   HLFF C+K + +W E  SW++    ++  P  V  F +   G G  R 
Sbjct: 384 CPLCGDVQEEVGHLFFNCKKILGLWWESMSWIQAMGPLSVSP--VDHFLQFCDGFGAERN 441

Query: 481 AK-----WLALGATIQYLWQARNLSYVEKKPFAASHVIKEIKLDVYR 356
                  W+AL +TI   W+ RN    + KPF    V+++    ++R
Sbjct: 442 HSTCCGWWVALTSTI---WKHRNFLIFQNKPFKPQKVMEDAMFSIWR 485


>ref|XP_006381710.1| hypothetical protein POPTR_0006s16215g [Populus trichocarpa]
           gi|550336461|gb|ERP59507.1| hypothetical protein
           POPTR_0006s16215g [Populus trichocarpa]
          Length = 155

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
 Frame = -3

Query: 685 THDHLFF-----KCVLCSSADETHDH-LFFKCEKAVAVWSEICSWLRCRNQMTTIPSAVR 524
           T D L F      CVLC   D+ H H LFF C     +W +I +WLR   +M T+ SA R
Sbjct: 27  TRDRLRFIGTETHCVLCRHHDDNHSHQLFFACNWTSILWRKIRAWLRMNRRMATLNSATR 86

Query: 523 RFQREKAGSGIVRKAKWLALGATIQYLWQARNLSYVEKKPFAASHVIKEIKLDVYRVLY 347
                K    +  + + ++L  T+  +W+ RN    +        + ++ ++  Y +L+
Sbjct: 87  GLSTRK--KNLEARMRRVSLSITVYLIWEERNKRIFDNTYNLVELIYRKFQVFFYMILH 143


Top