BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00011500
         (2143 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38862.1| hypothetical protein MIMGU_mgv1a001704mg [Mimulus...   526   e-170
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      425   e-138
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   423   e-137
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             373   e-119
ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citr...   375   e-119
ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citr...   375   e-119
gb|ABK96054.1| unknown [Populus trichocarpa]                          374   e-119
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...   377   e-119
dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]        387   e-118
ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Popu...   373   e-117
dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|2196...   372   e-117
ref|XP_007051395.1| Homeodomain-like superfamily protein isoform...   370   e-117
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...   362   e-115
gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]         369   e-115
ref|XP_007051399.1| Homeodomain-like superfamily protein isoform...   362   e-114
ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prun...   353   e-113
ref|XP_002320238.2| hypothetical protein POPTR_0014s10260g [Popu...   344   e-110
ref|NP_001235187.1| late elongated hypocotyl and circadian clock...   352   e-108
ref|XP_006352623.1| PREDICTED: protein LHY-like [Solanum tuberosum]   345   e-108
ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine m...   343   e-107

>gb|EYU38862.1| hypothetical protein MIMGU_mgv1a001704mg [Mimulus guttatus]
          Length = 770

 Score =  526 bits (1355), Expect(2) = e-170
 Identities = 311/608 (51%), Positives = 383/608 (62%), Gaps = 36/608 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TK+AVQIRSHAQKFFTKLEKEA VKG+P+G ++DIEI               KTS G   
Sbjct: 55   TKSAVQIRSHAQKFFTKLEKEATVKGVPVGHAIDIEIPPPRPKRKPSNPYPRKTSVGAPT 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHE--EPANDEKVENSMEYHEKENCFEAFIPLKKAP 1789
            S + VKDGKI NP+SS    K+T+E E  EP +D K+ENS EYHE +N  EA+  LK AP
Sbjct: 115  SHVTVKDGKISNPLSS----KITIEKESEEPCDDGKLENSNEYHETDNWSEAYTLLKTAP 170

Query: 1788 C-EXXXXXXXXXXXSDAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERFDNQ 1612
            C             SDAP   CTFRQY+PL  EA +QDE   S+++ E  G   E+ D++
Sbjct: 171  CASPSSTNKSSLSMSDAPGKSCTFRQYIPLPKEAGNQDEVVVSKVTIETKGLAAEKCDDK 230

Query: 1611 QPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHVPVHI 1432
            + FQDK    ISN  + +L  EK +H+K   EL++SEN   + ADV ++QNYPRHV VHI
Sbjct: 231  KYFQDKAPSNISNVVNSYLSHEKYVHSKRIAELKKSENALPI-ADVLSSQNYPRHVNVHI 289

Query: 1431 LDG---------SQDISHADSAFRHMGGTHAHQ----AASGHYDNASKSSISQSFPSYHH 1291
            +DG         S D S  DS F  MGG + HQ      + HY NAS SS+ QSFPSYH 
Sbjct: 290  VDGIPGASAQTISPDGSCTDSTFHQMGGVYGHQNLFMKPAEHYSNASGSSVHQSFPSYH- 348

Query: 1290 PVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVEASTEPST 1111
            P+F P Q+ DDY   +H+S+TFS+LIVSALSQN  AYAAAS  ++ WP VN+EA   P  
Sbjct: 349  PIFTPNQNQDDY---LHMSSTFSSLIVSALSQNLAAYAAASFTASLWPCVNMEA---PIE 402

Query: 1110 ASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXXXXXXXXX 931
            +S GAFQS  +S+ PSMG               AHGLLPL A + PGF            
Sbjct: 403  SSDGAFQSRPLSSVPSMGSIAAATVAAATAWWTAHGLLPLPAQFLPGFTCSPASVSATPM 462

Query: 930  XSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXXXXEGVKLN 751
             S++G+ ++ E++E++P+PALGGQQLEP+CS+ALHEQ S  KSPML        E  KLN
Sbjct: 463  ESSEGRVINSEKRENTPNPALGGQQLEPDCSKALHEQHSASKSPMLSSSDSEASESAKLN 522

Query: 750  VGLAASETAKVEVMTE-------SKNKKVVDRSSCGSNTPSSSEIEADAMEKNADGKE-- 598
            VGLA +ET KV    E       SKN+K+VDRSSCGSNT SSS++E DA+EK+A G E  
Sbjct: 523  VGLATAETTKVSETDELDNDVNKSKNQKLVDRSSCGSNTSSSSDVETDALEKHAKGTEEN 582

Query: 597  ----KEETEE-------NDPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
                +EE EE        DPFNRRCRS  N+ DSWKEVS+ GRL F+ALFSRE+LPQSFS
Sbjct: 583  HMNGEEEPEEVDANHPLGDPFNRRCRSIININDSWKEVSEGGRLAFRALFSRERLPQSFS 642

Query: 450  PPHAKGNK 427
            PPH   NK
Sbjct: 643  PPHDVKNK 650



 Score =  100 bits (249), Expect(2) = e-170
 Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 8/104 (7%)
 Frame = -3

Query: 437 KATKNVIK-ESERTENGLQLDLNVMTWGNSAQQNGEEDGKSL---NKEEEALNIGL---R 279
           K  KN  + E ++ E+G++LDLN  TW +  Q+ G E+  SL   NKEE  L++GL    
Sbjct: 650 KGEKNYTENEQKKDESGVRLDLNAKTWESCWQKQGVENNGSLIGENKEEGLLDLGLGLAA 709

Query: 278 CGKLKA-RRTGFKPYKRCSVEAKECRVSGNSHDEEKCPKRLRVE 150
             KLKA RRTGFKPYKRC++EAKE R++ NSH+EEKCPKRLR++
Sbjct: 710 ANKLKAPRRTGFKPYKRCAMEAKESRMAPNSHNEEKCPKRLRMD 753


>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  425 bits (1092), Expect(2) = e-138
 Identities = 262/613 (42%), Positives = 351/613 (57%), Gaps = 41/613 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+VKG+PIG+++DIEI               KT      
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPT 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEE------PANDEKVENSMEYHEKENCFEAFIPL 1801
             Q G KDGK+   VSSS   K  ++ E+      P+ DEK  N  E  +++NC E F   
Sbjct: 115  LQAGTKDGKLLASVSSSHPGKQILDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLF 174

Query: 1800 KKAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-ME 1627
            ++APC            +  P +N CTFR++VPL  E  +QDET  S I+ EP G+Q ++
Sbjct: 175  QEAPCTSMSSANKNSIPTPVPLRNSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLD 234

Query: 1626 RFDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTA-DVTTTQNYPR 1450
            + D +Q  QD    K SN  +     EK + A+ +DE  QSEN  +    ++   QN+PR
Sbjct: 235  KPDFRQKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPR 294

Query: 1449 HVPVHILDGS---------QDISHADSAFRHMGGTHAH---------QAASGHYDNASKS 1324
            HVPVH+LDGS          ++++ +S   H  G H H          AA+ H +N S+S
Sbjct: 295  HVPVHVLDGSLGTCTQAPSSEMTYGESLV-HQIGIHGHPNLFQNPAASAATEHQNNGSRS 353

Query: 1323 SISQSFPSYHHPVFAPVQS-LDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWP 1147
            SI QSFP++H P F P++S  DDY+SF+ +S+TFS+LIVS L QNP A+AAAS A+ FWP
Sbjct: 354  SIHQSFPTFHTP-FGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWP 412

Query: 1146 SVNVEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF 967
              N+EAS +  + + G F + Q++  PSM                AHG+LPLCAP H GF
Sbjct: 413  CSNMEASADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCAPLHTGF 472

Query: 966  -XXXXXXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLX 790
                          + Q    + ER+E++P      QQL+ ECSEAL  Q S  KSP + 
Sbjct: 473  TCAPASATSVPPTNTGQAPAANTERRENTPQ----DQQLDLECSEALQAQHSASKSPAMS 528

Query: 789  XXXXXXXEGVKLNVGLAASETAK-------VEVMTESKNKKVVDRSSCGSNTPSSSEIEA 631
                    G K N    A +  K       +   T+ K++K VDRSSCGSNTPSSSE+E 
Sbjct: 529  SSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVET 588

Query: 630  DAMEKNADGKEK-EETEEN----DPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKL 466
            DA+EK+ +G+E+ +E + N    +  NRRCRS + + +SWKEVS+EGRL F+ALFSRE L
Sbjct: 589  DALEKHENGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVL 648

Query: 465  PQSFSPPHAKGNK 427
            PQSFSPPH   NK
Sbjct: 649  PQSFSPPHDLKNK 661



 Score = 96.7 bits (239), Expect(2) = e-138
 Identities = 55/95 (57%), Positives = 69/95 (72%), Gaps = 4/95 (4%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGN-SAQQNGEEDG--KSLNKEEEALNIGLRCGKLKARRTGFKPY 237
           E+ EN LQLDLN   WG  S+ Q+ E++G  ++ N+EE  L IGL  GK+K RRTGFKPY
Sbjct: 677 EKHENALQLDLNSKAWGPCSSHQDVEKNGLMENDNREEGLLTIGLGYGKIKGRRTGFKPY 736

Query: 236 KRCSVEAKECRVSG-NSHDEEKCPKRLRVEGEVST 135
           KRCSVEA + RV+   S  EEK PKR+R+EG+VST
Sbjct: 737 KRCSVEAIDSRVTNCCSQGEEKGPKRIRLEGDVST 771


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  423 bits (1087), Expect(2) = e-137
 Identities = 261/613 (42%), Positives = 350/613 (57%), Gaps = 41/613 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+VKG+PIG+++DIEI               KT      
Sbjct: 141  TKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPT 200

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEE------PANDEKVENSMEYHEKENCFEAFIPL 1801
             Q G KDGK+   VSS    K  ++ E+      P+ DEK  N  E  +++NC E F   
Sbjct: 201  LQAGTKDGKLLASVSSXHPGKQILDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLF 260

Query: 1800 KKAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-ME 1627
            ++APC            +  P +N CTFR++VPL  E  +QDET  S I+ EP G+Q ++
Sbjct: 261  QEAPCTSMSSANKNSIPTPVPLRNSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLD 320

Query: 1626 RFDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTA-DVTTTQNYPR 1450
            + D +Q  QD    K SN  +     EK + A+ +DE  QSEN  +    ++   QN+PR
Sbjct: 321  KPDFRQKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPR 380

Query: 1449 HVPVHILDGS---------QDISHADSAFRHMGGTHAH---------QAASGHYDNASKS 1324
            HVPVH+LDGS          ++++ +S   H  G H H          AA+ H +N S+S
Sbjct: 381  HVPVHVLDGSLGTCTQAPSSEMTYGESLV-HQIGIHGHPNLFQNPAASAATEHQNNGSRS 439

Query: 1323 SISQSFPSYHHPVFAPVQS-LDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWP 1147
            SI QSFP++H P F P++S  DDY+SF+ +S+TFS+LIVS L QNP A+AAAS A+ FWP
Sbjct: 440  SIHQSFPTFHTP-FGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWP 498

Query: 1146 SVNVEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF 967
              N+EAS +  + + G F + Q++  PSM                AHG+LPLCAP H GF
Sbjct: 499  CSNMEASADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCAPLHTGF 558

Query: 966  -XXXXXXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLX 790
                          + Q    + ER+E++P      QQL+ ECSEAL  Q S  KSP + 
Sbjct: 559  TCAPASATSVPPTNTGQAPAANTERRENTPQ----DQQLDLECSEALQAQHSASKSPAMS 614

Query: 789  XXXXXXXEGVKLNVGLAASETAK-------VEVMTESKNKKVVDRSSCGSNTPSSSEIEA 631
                    G K N    A +  K       +   T+ K++K VDRSSCGSNTPSSSE+E 
Sbjct: 615  SSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVET 674

Query: 630  DAMEKNADGKEK-EETEEN----DPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKL 466
            DA+EK+ +G+E+ +E + N    +  NRRCRS + + +SWKEVS+EGRL F+ALFSRE L
Sbjct: 675  DALEKHENGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVL 734

Query: 465  PQSFSPPHAKGNK 427
            PQSFSPPH   NK
Sbjct: 735  PQSFSPPHDLKNK 747



 Score = 94.7 bits (234), Expect(2) = e-137
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
 Frame = -3

Query: 407  ERTENGLQLDLNVMTWGN-SAQQNGEEDG--KSLNKEEEALNIGLRCGKLKARRTGFKPY 237
            E+ EN LQLDLN   WG  S+ Q+ E++G  ++ N+EE  L IGL  GK+K RRTGFKPY
Sbjct: 763  EKHENALQLDLNSKAWGPCSSHQDVEKNGLMENDNREEGLLTIGLGYGKIKGRRTGFKPY 822

Query: 236  KRCSVEAKECRVSG-NSHDEEKCPKRLRVEGEVST 135
            KRCSVEA + RV+   S  EEK PKR+R+EG+ ST
Sbjct: 823  KRCSVEAIDSRVTNCCSQGEEKGPKRIRLEGDXST 857


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  373 bits (957), Expect(2) = e-119
 Identities = 254/621 (40%), Positives = 339/621 (54%), Gaps = 46/621 (7%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+VKG+PIG++LDI+I               KTS G+  
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPT 114

Query: 1962 SQLGVKDGKIPNPVSSS-CQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ+G KDGK+    SSS C+  + +E E    +P  DEK EN+ + ++ +NC E F   +
Sbjct: 115  SQVGTKDGKLFTSASSSDCKQALDLEKEPLPEKPNGDEKPENAKD-NQDDNCSEVFTLHQ 173

Query: 1797 KAPCEXXXXXXXXXXXSD-APKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-MER 1624
            +  C            +  A +N  T R++VP    ++ QDET  S ++ E  G+Q +E+
Sbjct: 174  EVHCSSVSSANRSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEK 233

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHV 1444
             D +Q  QD  +   S   +  +L EK +    + +L  +   D + A    TQNYPRHV
Sbjct: 234  ADAKQTIQDTGTSNGSKLGNHNVLHEKPIQGDKTQDLNCALPMDEMQA----TQNYPRHV 289

Query: 1443 PVHILDGS---------QDISHADSAFRHMGGTHAHQ--------AASGHYDNASKSSIS 1315
            PV ++DGS          D+S  DS F  MG  H H         +A+  + N    S++
Sbjct: 290  PVQVVDGSLGTCTQTPSSDMSFQDSIFHPMGEVHRHHNPFTNPAASATTEHQNNVPRSVN 349

Query: 1314 QSFPSYHHPVFAPVQ-SLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVN 1138
            QSFP++H P F P++ + DDYQSF+H+S+TFS+LIVS L QNP A+AAAS A+  WP  N
Sbjct: 350  QSFPAFHPP-FTPIRHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAATVWPYAN 408

Query: 1137 VEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXX 958
            VEAS +   ++ G F   Q+ +TPSM                AHGL+PLCAP    F   
Sbjct: 409  VEASADSPASTQGVFPPRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLCAPLPTAFTCN 468

Query: 957  XXXXXXXXXXSN-QGKGVSVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLXXX 784
                       + Q      E + ++   P L  QQL+PE SEA+  Q S  K P+    
Sbjct: 469  PASTAAVPPTDSGQAPAAKTEGEVNTLQTPPL--QQLDPEYSEAVQAQHSDSKLPIPSSS 526

Query: 783  XXXXXEGVKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAM 622
                  G KLN G  A++       TE      +K +K VDRSSCGSNT SSS+ E DA+
Sbjct: 527  DSEESGGAKLNSGPKATDHENAVTATELHDSNKTKGRKQVDRSSCGSNTASSSDRETDAL 586

Query: 621  EKNADGKEK-EETEEN----DPFNRRC-----RSATNVGDSWKEVSQEGRLTFQALFSRE 472
            EK   GKE+ +E + N    D  NRRC     RS + + DSWK VS+EGRL FQALFSRE
Sbjct: 587  EKQEMGKEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEEGRLAFQALFSRE 646

Query: 471  KLPQSFSPPH---AKGNKKCN 418
             LPQSFSPPH     GN+K N
Sbjct: 647  VLPQSFSPPHDLKNMGNQKDN 667



 Score = 87.0 bits (214), Expect(2) = e-119
 Identities = 51/92 (55%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = -3

Query: 410 SERTENGLQLDLNVMTWGNSAQQNGEEDGKSLNKEEEALNIGLRCGKLKARRTGFKPYKR 231
           +E   N   LDLN    G+ + Q G  + +  N  E  L IGL  GKLKARRTGFKPYKR
Sbjct: 676 NENDGNASLLDLNSQKSGSCSVQQGILNFEPNNNGEGLLTIGLAYGKLKARRTGFKPYKR 735

Query: 230 CSVEAKECRVSGNS-HDEEKCPKRLRVEGEVS 138
           CSVEAKE RV+  S   EEK PKR+R+EGE S
Sbjct: 736 CSVEAKENRVANASGQGEEKGPKRIRLEGEAS 767


>ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citrus sinensis]
            gi|568876654|ref|XP_006491390.1| PREDICTED: protein
            LHY-like isoform X2 [Citrus sinensis]
            gi|568876656|ref|XP_006491391.1| PREDICTED: protein
            LHY-like isoform X3 [Citrus sinensis]
            gi|568876658|ref|XP_006491392.1| PREDICTED: protein
            LHY-like isoform X4 [Citrus sinensis]
          Length = 765

 Score =  375 bits (964), Expect(2) = e-119
 Identities = 245/603 (40%), Positives = 324/603 (53%), Gaps = 36/603 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TK AVQIRSHAQKFF+KLEKEA+ KG+PIG+++DI+I               KT      
Sbjct: 55   TKKAVQIRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPM 114

Query: 1962 SQLGVKDGKIPNPVSS-SCQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ+G KDGK+ + VSS  C   + +E E     P  DEK   ++E  +K+NC E FI  +
Sbjct: 115  SQIGAKDGKLRSSVSSLRCNQVLDLEKEPISDRPNGDEKPTYTIE-SQKDNCSEVFILHQ 173

Query: 1797 KAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTE-PTGSQMER 1624
            +A C            +    ++ C  R++VP   E ++QDET  S ++ E     +  +
Sbjct: 174  EAHCSSVSSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGK 233

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHV 1444
             D +   QD  S K  N  +     EK++H +  D++     D   TA+V  TQNYPRHV
Sbjct: 234  PDAKLALQDNGSSKPLNLENACPSHEKSVHGEKRDDVA----DALPTAEVQATQNYPRHV 289

Query: 1443 PVHILDGS--------QDISHADSAFRHMGGTHAHQ------AASGHYDNASK--SSISQ 1312
             VHILDGS         D+   +S F  +G  H +       AAS   +N S    S  Q
Sbjct: 290  NVHILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQ 349

Query: 1311 SFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVE 1132
            SFP++H P        DDY+SF+H+S+ FS+LIVS L QNP A+AAAS A+ FWP  N+E
Sbjct: 350  SFPTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNME 409

Query: 1131 ASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXX 952
             S +  T   G F S Q+S+ PSM                AHGLLPLCAP+H  F     
Sbjct: 410  TSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHAPFICPPA 469

Query: 951  XXXXXXXXSN-QGKGVSVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXX 778
                       Q      ++ +++ P+PAL   Q + E SEAL  Q S  KS  +     
Sbjct: 470  CATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDS 529

Query: 777  XXXEGVKLNVGLAA------SETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEK 616
                  KL + L A      SE  ++    ++KN+K VDRSSCGSNTPSSSE+E DA+EK
Sbjct: 530  EESASAKLKMELKATDHEKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEK 589

Query: 615  NADGKEKEETEE-----NDPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
               GKE+ +  +      DP NRR RS++N+ DSWKEVS+ GRL FQALFSRE LPQSFS
Sbjct: 590  QEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSFS 649

Query: 450  PPH 442
            PPH
Sbjct: 650  PPH 652



 Score = 84.0 bits (206), Expect(2) = e-119
 Identities = 48/83 (57%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
 Frame = -3

Query: 380 DLNVMTWGNSAQQNGEE----DGKSLNKEEEALNIGLRCGKLKARRTGFKPYKRCSVEAK 213
           DLN  TWG+       E     G   N  E  L IGL  GKLKARRTGFKPYKRCSVEAK
Sbjct: 680 DLNSKTWGSCFGHQEVEKSTVSGVENNGGEGLLTIGLGHGKLKARRTGFKPYKRCSVEAK 739

Query: 212 ECRVSGNSHD-EEKCPKRLRVEG 147
           E R+    +  EEKCPKR+RVEG
Sbjct: 740 ENRILNTGNQAEEKCPKRIRVEG 762


>ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citrus clementina]
            gi|567904438|ref|XP_006444707.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904440|ref|XP_006444708.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904442|ref|XP_006444709.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904444|ref|XP_006444710.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546968|gb|ESR57946.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546969|gb|ESR57947.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546970|gb|ESR57948.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546971|gb|ESR57949.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546972|gb|ESR57950.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
          Length = 765

 Score =  375 bits (964), Expect(2) = e-119
 Identities = 245/603 (40%), Positives = 324/603 (53%), Gaps = 36/603 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TK AVQIRSHAQKFF+KLEKEA+ KG+PIG+++DI+I               KT      
Sbjct: 55   TKKAVQIRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPM 114

Query: 1962 SQLGVKDGKIPNPVSS-SCQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ+G KDGK+ + VSS  C   + +E E     P  DEK   ++E  +K+NC E FI  +
Sbjct: 115  SQIGAKDGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIE-SQKDNCSEVFILHQ 173

Query: 1797 KAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTE-PTGSQMER 1624
            +A C            +    ++ C  R++VP   E ++QDET  S ++ E     +  +
Sbjct: 174  EAHCSSVSSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGK 233

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHV 1444
             D +   QD  S K  N  +     EK++H +  D++     D   TA+V  TQNYPRHV
Sbjct: 234  PDAKLALQDNGSSKPLNLENACPSHEKSVHGEKRDDVA----DALPTAEVQATQNYPRHV 289

Query: 1443 PVHILDGS--------QDISHADSAFRHMGGTHAHQ------AASGHYDNASK--SSISQ 1312
             VHILDGS         D+   +S F  +G  H +       AAS   +N S    S  Q
Sbjct: 290  NVHILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQ 349

Query: 1311 SFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVE 1132
            SFP++H P        DDY+SF+H+S+ FS+LIVS L QNP A+AAAS A+ FWP  N+E
Sbjct: 350  SFPTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNME 409

Query: 1131 ASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXX 952
             S +  T   G F S Q+S+ PSM                AHGLLPLCAP+H  F     
Sbjct: 410  TSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHTPFTCPPA 469

Query: 951  XXXXXXXXSN-QGKGVSVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXX 778
                       Q      ++ +++ P+PAL   Q + E SEAL  Q S  KS  +     
Sbjct: 470  CATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDS 529

Query: 777  XXXEGVKLNVGLAA------SETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEK 616
                  KL + L A      SE  ++    ++KN+K VDRSSCGSNTPSSSE+E DA+EK
Sbjct: 530  EESASAKLKMELKATDHEKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEK 589

Query: 615  NADGKEKEETEE-----NDPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
               GKE+ +  +      DP NRR RS++N+ DSWKEVS+ GRL FQALFSRE LPQSFS
Sbjct: 590  QEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSFS 649

Query: 450  PPH 442
            PPH
Sbjct: 650  PPH 652



 Score = 84.0 bits (206), Expect(2) = e-119
 Identities = 48/83 (57%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
 Frame = -3

Query: 380 DLNVMTWGNSAQQNGEE----DGKSLNKEEEALNIGLRCGKLKARRTGFKPYKRCSVEAK 213
           DLN  TWG+       E     G   N  E  L IGL  GKLKARRTGFKPYKRCSVEAK
Sbjct: 680 DLNSKTWGSCFGHQEVEKSTVSGVENNGGEGLLTIGLGHGKLKARRTGFKPYKRCSVEAK 739

Query: 212 ECRVSGNSHD-EEKCPKRLRVEG 147
           E R+    +  EEKCPKR+RVEG
Sbjct: 740 ENRILNTGNQAEEKCPKRIRVEG 762


>gb|ABK96054.1| unknown [Populus trichocarpa]
          Length = 764

 Score =  374 bits (959), Expect(2) = e-119
 Identities = 241/603 (39%), Positives = 328/603 (54%), Gaps = 36/603 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKT VQIRSHAQKFF+KLEKEA+VKG+PIG++LDI+I               K   G  A
Sbjct: 55   TKTVVQIRSHAQKFFSKLEKEAVVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPA 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEEPA-----NDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ+G KDGK+    S  C  +V    +EP       DE+  N+ E ++ +NC E F  L+
Sbjct: 115  SQVGAKDGKLLTSASFPCCKQVLGLEKEPLPEKLNGDERPTNAKE-NQDDNCSEVFSLLQ 173

Query: 1797 KAPCEXXXXXXXXXXXS-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERF 1621
            +  C            + D  K    FR++V    E  + D +  S ++ E   +Q  + 
Sbjct: 174  EPHCSSVPSINKNSVPTLDILKKASPFREFVSSPKEG-NHDASNQSSVTVELGANQ--KL 230

Query: 1620 DNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHVP 1441
            DN    QD  + + S   +     EK    K SD+   +   D + A     QNYPRHVP
Sbjct: 231  DNSDVKQDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQA----MQNYPRHVP 286

Query: 1440 VHILDGS---------QDISHADSAFRHMG------GTHAHQAAS---GHYDNASKSSIS 1315
            VH+LDGS          D S  +S F  +G        ++H AAS    H + + +SS+ 
Sbjct: 287  VHVLDGSLGTCMQTPPSDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMH 346

Query: 1314 QSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNV 1135
            QSFPS+  P      + DDY+SF+H+S+TFS+L+VS+L QNP A+AAAS AS FWP  NV
Sbjct: 347  QSFPSFPPPFTPTHHNQDDYRSFLHISSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNV 406

Query: 1134 EASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XXX 958
            E+S +    + G FQS Q+++ PSM                AHGLLP+CAP H  F    
Sbjct: 407  ESSADSPACAQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPLHTSFACPP 466

Query: 957  XXXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXX 778
                      + Q      ERKE++ +P+L GQ   PE +EAL  Q S  KSP +     
Sbjct: 467  ASATAIQSVDTGQVSATKTERKETAENPSLQGQIQGPEHTEALQAQNSASKSPKITSSDS 526

Query: 777  XXXEGVKLNVG------LAASETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEK 616
                G KLN G         ++  +V+  +++K++K++DRSSCGSNTPSSSEIE DA+EK
Sbjct: 527  EESGGPKLNTGPEVIDHELTTKPHEVQDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEK 586

Query: 615  NADG-KEKEETEENDP----FNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
               G +E +E + N P     +R  RS++++ DSWKEVS+EGRL FQALF+RE LPQSFS
Sbjct: 587  AEKGTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFS 646

Query: 450  PPH 442
            PPH
Sbjct: 647  PPH 649



 Score = 85.5 bits (210), Expect(2) = e-119
 Identities = 51/95 (53%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGN-SAQQNGEEDGKSLNK---EEEALNIGLRCGKLKARRTGFKP 240
           E+  +   ++LN  TW   S  Q GE++  S  +   EEE L IGL  GKLK RRTGFKP
Sbjct: 669 EKDGDASLINLNSKTWECCSGHQEGEKNALSRCENYGEEELLTIGLGHGKLKVRRTGFKP 728

Query: 239 YKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVS 138
           YKRCS+EAKE R  +G+   EEK PKRLR+EGE S
Sbjct: 729 YKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEAS 763


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
            gi|223545573|gb|EEF47077.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 768

 Score =  377 bits (969), Expect(2) = e-119
 Identities = 247/609 (40%), Positives = 332/609 (54%), Gaps = 37/609 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEAI KG+PIG++LDI+I               KT AG + 
Sbjct: 56   TKTAVQIRSHAQKFFSKLEKEAIAKGVPIGQALDIDIPPPRPKRKPSNPYPRKTGAGPTP 115

Query: 1962 SQLGVKDGKIPNPVS-SSCQSKVTVEHE---EPANDEKVENSMEYHEKENCFEAFIPLKK 1795
            SQ+  KDGK+P+ VS   C   + +E E   E  N  + +     ++ +NC E F  L++
Sbjct: 116  SQVAAKDGKLPSLVSFPRCTQVLDLEKEPLPERLNGHEKQTDATENQGDNCSEVFTLLQE 175

Query: 1794 APCEXXXXXXXXXXXS-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-MERF 1621
            A C            + +A KN C+FR++VP   + ++QD T  S ++ E  G+Q +++ 
Sbjct: 176  AHCSSVSSANKNSVVTAEALKNSCSFREFVPSLKKVVNQDATNESYVTIELEGNQKLDKP 235

Query: 1620 DNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHVP 1441
            D +Q  QD  S K S  ++  L  EK   AK SDE     N    T ++ T Q YPRHVP
Sbjct: 236  DAKQTVQDNGSSKASK-SESCLFHEKFDQAKKSDEF----NSALPTDEMETMQGYPRHVP 290

Query: 1440 VHILDGS---------QDISHADSAFRHMGGTHAH---------QAASGHYDNASKSSIS 1315
            VH+L+GS          D+S  +  F   G  H H          A + H + A +SS  
Sbjct: 291  VHVLEGSLGTCMQTPTSDVSFQEPIFCPTGEVHGHPNLYSHPAASATTEHQNTAPRSSTH 350

Query: 1314 QSFPSYHHPVFAPVQ-SLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVN 1138
            QSFPS+  P F   Q + DDY+SF+H+S+TFS+LIVS L QNP A++AAS A+ FWP  N
Sbjct: 351  QSFPSF--PPFNSTQHNQDDYRSFLHISSTFSSLIVSTLLQNPAAHSAASFAATFWPYAN 408

Query: 1137 VEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XX 961
            +E+S +      G F S Q+++ PSM                AHGLLPLCAP H  F   
Sbjct: 409  LESSADSPICPQGGFPSRQMNSAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHAAFTCP 468

Query: 960  XXXXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXX 781
                       + Q      ERK +  +P L  QQ + E S+ L  Q S  KS  +    
Sbjct: 469  PASGTAVASTGAGQVPAAKTERKLTVENPLLQNQQFDVEHSKVLQAQNSASKSLEMSLSD 528

Query: 780  XXXXEGVKLNVGLAASE------TAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAME 619
                 G K N G  A++        +V+  +++K +K  DRSSCGSNT SSSE+E DA+E
Sbjct: 529  SEESGGPKKNTGSKATDHEMATPAPEVQDPSKAKARKPADRSSCGSNTSSSSEVETDALE 588

Query: 618  KNADGKEK-EETEEN----DPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSF 454
            K   G E+ +ET+ N    +   RR RS +++ DSWKEVS+EGRL FQALFSRE LPQSF
Sbjct: 589  KLEKGNEELKETDTNPEPTESSCRRSRSNSSISDSWKEVSEEGRLAFQALFSREVLPQSF 648

Query: 453  SPPHAKGNK 427
            SPPH   N+
Sbjct: 649  SPPHVLKNE 657



 Score = 80.1 bits (196), Expect(2) = e-119
 Identities = 50/96 (52%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGNSAQQNGEEDGK----SLNKEEEALNIGLRCGKLKARRTGFKP 240
           E+ EN L L LN    G        E  +      N E+  L  GL  GKLKARRTGFKP
Sbjct: 673 EKNENALLLSLNGNISGFCTSHQEAEKIEMPRCENNGEDGLLTFGLGHGKLKARRTGFKP 732

Query: 239 YKRCSVEAKECR-VSGNSHDEEKCPKRLRVEGEVST 135
           YKRCSVEAKE R ++  S  EEK PKR+RVEG+ ST
Sbjct: 733 YKRCSVEAKENRMLTAGSQGEEKGPKRIRVEGKAST 768


>dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]
          Length = 776

 Score =  387 bits (994), Expect(2) = e-118
 Identities = 244/608 (40%), Positives = 339/608 (55%), Gaps = 36/608 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFFTKLEKEA++KG+PIG++LDIEI               KT AG   
Sbjct: 55   TKTAVQIRSHAQKFFTKLEKEALIKGVPIGQALDIEIPPPRPKRKPINPYPRKTVAGTPT 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEEPANDEKVENSMEYHEKENCFEAFIPLKKAPCE 1783
              +G KDGK+    SS CQ K  +  E+P  D+K++ + E  E E   +      + P  
Sbjct: 115  PVVGGKDGKLYASDSSLCQQKEPLL-EKPGGDKKLDIAKENRE-EVISDVLTLFHEGPTS 172

Query: 1782 XXXXXXXXXXXSDAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQM-ERFDNQQP 1606
                         AP+N CTFR++VP+  +  ++D+ + S ++ E  G+Q  ++ D +Q 
Sbjct: 173  PSVRNRDCLPTQVAPQNSCTFREFVPIV-KGTNRDDASKSYVTVESKGNQEPDKLDTKQS 231

Query: 1605 FQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTA-DVTTTQNYPRHVPVHIL 1429
            FQD  S    +  + F  +EK  H +  DE  Q   D+  T  D+   Q+ PRHVPVHIL
Sbjct: 232  FQDASSCNSLDMENSFPSKEKLTHGEKLDEPNQP--DEVFTENDMQAVQSCPRHVPVHIL 289

Query: 1428 DGS--------QDISHADSAFRHMGGT---------HAHQAASGHYDNASKSSISQSFPS 1300
            DGS        QD+++ +S    +GG          HA    S H  N S+SSI   FPS
Sbjct: 290  DGSLGMNTNNTQDMTYHESIVHQIGGVQGHLNQFTHHASSNTSEHQSNPSRSSIHHMFPS 349

Query: 1299 YHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWP-SVNVEAST 1123
            +H  + +   S D   S +H+S+TFS+LIVSAL QNP A+AAAS A++FWP + N EA  
Sbjct: 350  FHPMMASNCDSNDYRSSCLHISSTFSSLIVSALLQNPAAHAAASFAASFWPYAANFEAPA 409

Query: 1122 EPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXXXXX 943
            E  T + G   S Q+++ PSM                AHGLLPLC+P+H           
Sbjct: 410  ESCTGTPGGVPSRQMNSVPSMAAIAAATVAAATAWWAAHGLLPLCSPFHTCVTCPTSSGT 469

Query: 942  XXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXXXXEG 763
                 + Q    + ER++ +PDP+L  QQL+P C+E L EQ S  K P+L        +G
Sbjct: 470  AVPMDACQTNVANNEREDGTPDPSLHVQQLDPGCTETLREQLSASKPPVLCSSDSEESDG 529

Query: 762  VKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAMEKNADGK 601
            +K+N  +  ++T +  ++TE      +KN+K VDRSSCGSNTPSSSE+E DA+EK    K
Sbjct: 530  MKVNTTVTVTDTEQAAIVTELIDSNTTKNRKQVDRSSCGSNTPSSSEVETDALEKIE--K 587

Query: 600  EKEETEEN----------DPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
            +KE+ +E+          +  NRR ++++N  D WKEVS+EGR+ F ALFSRE LPQSFS
Sbjct: 588  DKEDPKESPHVNHTPTPTESGNRRGKNSSNPNDPWKEVSEEGRIAFWALFSREVLPQSFS 647

Query: 450  PPHAKGNK 427
            PP+   +K
Sbjct: 648  PPYDLNSK 655



 Score = 68.9 bits (167), Expect(2) = e-118
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
 Frame = -3

Query: 416 KESERTENGLQLDLNVMTWGN---SAQQNGEEDGKSLNKEE-----EALNIGLRCGKLKA 261
           +  E+ + GLQL++N  +  +   S     ++   SL+          L + L  GKLKA
Sbjct: 669 QNEEKDQKGLQLEVNDKSSSSIRCSIHYGNKDKESSLSSSRFGGGNNTLTVKLGEGKLKA 728

Query: 260 RRTGFKPYKRCSVEAKE-CRVSGNS---HDEEKCPKRLRV-EGEVST 135
            RTGFKPYKRCSVEAKE  R+ G+S    DEEK PKRLR+  GE ST
Sbjct: 729 CRTGFKPYKRCSVEAKESSRIGGSSTGCQDEEKGPKRLRLGGGETST 775


>ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Populus trichocarpa]
            gi|566158675|ref|XP_006386664.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|566158677|ref|XP_002301449.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345281|gb|ERP64460.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345282|gb|ERP64461.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345283|gb|EEE80722.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
          Length = 768

 Score =  373 bits (958), Expect(2) = e-117
 Identities = 247/604 (40%), Positives = 330/604 (54%), Gaps = 37/604 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+ KG+PIGK+L+I+I               KT  G  A
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEAVAKGVPIGKALEIDIPPPRPKRKPSNPYPRKTGVGPPA 114

Query: 1962 SQLGVKDGKIPNPVSSS-CQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ G KDGK+    SS  C+  + +E E    +P  DE+  N+ E ++ +NC E F  L+
Sbjct: 115  SQAGAKDGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKE-NQDDNCSEVFTLLQ 173

Query: 1797 KAPCEXXXXXXXXXXXS-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-MER 1624
            +A C            + +  K   +FR++VP S +  + D    S I+ E   +Q ++ 
Sbjct: 174  EAHCSSVASVNKNCVPALEVLKKTSSFREFVP-SPKKGNHDACNESFITVEHEANQKLDS 232

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHV 1444
             D  Q   D  ++K S   +   L E     K SD+   S   D + A     QNYPRHV
Sbjct: 233  SDANQTVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMKA----MQNYPRHV 288

Query: 1443 PVHILDGS--------QDISHADSAFRHMGGT------HAHQAAS---GHYDNASKSSIS 1315
            PVH+LDGS         D+S  DS F  +G        ++H   S    H  N  +SS+ 
Sbjct: 289  PVHVLDGSLGTCMETPSDLSFQDSMFHPVGDIPACPILYSHPTGSTTTDHPTNLPRSSMH 348

Query: 1314 QSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNV 1135
            QSFP +  P      + DDY+SF+H+S+TFS+ +VS L QNP A+AAAS A+ FWP  NV
Sbjct: 349  QSFPFFPPPFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNV 408

Query: 1134 EASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XXX 958
            E+S +    +   FQS Q+++ PSM                AHGLLP+CAP H  F    
Sbjct: 409  ESSADSPACAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPP 468

Query: 957  XXXXXXXXXXSNQGKGVSVERKESSPD-PALGGQQLEPECSEALHEQGSVLKSPMLXXXX 781
                      ++Q      ERKE++PD P L GQ  + E SEA+  Q S  K P L    
Sbjct: 469  ASATAIQSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSASKPPTLSSSD 528

Query: 780  XXXXEGVKLNVGLAA------SETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAME 619
                 G KLN           S+  +V+   ++K++K VDRSSCGSNTPSSSEIE DA+E
Sbjct: 529  SEESGGTKLNTAPKVTDHELNSKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALE 588

Query: 618  KNADGKEK-EETEENDPFN----RRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSF 454
            KN  GKE+ +E + N P +    RR RS++++ DSWKEVS+EGRL FQALF+RE+LPQSF
Sbjct: 589  KNEKGKEEPKEADANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTRERLPQSF 648

Query: 453  SPPH 442
            SPPH
Sbjct: 649  SPPH 652



 Score = 79.7 bits (195), Expect(2) = e-117
 Identities = 51/110 (46%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
 Frame = -3

Query: 449 LHMPKATKNVIKESERTENGLQLDLNVMTWGN-SAQQNGEEDG---KSLNKEEEAL-NIG 285
           +H  + T+      E+  +   LDLN  TWG  S  Q GE++    + +N  EE L  IG
Sbjct: 658 MHQKEDTEEKKNPDEKDGDASLLDLNSKTWGYCSGYQEGEKNAVVPRCVNDGEEGLLTIG 717

Query: 284 LRCGKLKARRTGFKPYKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVS 138
           L  G LKA  TGFKPYKRCS+EAKE R+ +     EEK PKRLR+E E S
Sbjct: 718 LGHGNLKAHLTGFKPYKRCSLEAKESRMGTTGGQGEEKGPKRLRLEREAS 767


>dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|219687747|dbj|BAH09384.1|
            PnLHY1 [Populus nigra]
          Length = 768

 Score =  372 bits (954), Expect(2) = e-117
 Identities = 247/604 (40%), Positives = 329/604 (54%), Gaps = 37/604 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+ KG+PIG++L+I+I               KT  G  A
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEAVAKGVPIGQALEIDIPPPRPKRKPSNPYPRKTGVGPPA 114

Query: 1962 SQLGVKDGKIPNPVSSS-CQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFIPLK 1798
            SQ G KDGK+    SS  C+  + +E E    +P  DE+  N+ E ++ +NC E F  L+
Sbjct: 115  SQAGAKDGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKE-NQDDNCSEVFTLLQ 173

Query: 1797 KAPCEXXXXXXXXXXXS-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-MER 1624
            +A C            + +  K   +FR++VP   +  D D    S I+ E   +Q ++ 
Sbjct: 174  EAHCSSVASVNKNCVPALEVLKKTSSFREFVPSPKKGND-DACNESFITVEHEANQKLDS 232

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHV 1444
             D  Q   D  ++K S   +   L E     K SD+   S   D + A     QNYPRHV
Sbjct: 233  SDANQTVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMQA----MQNYPRHV 288

Query: 1443 PVHILDGS--------QDISHADSAFRHMGGT------HAHQAAS---GHYDNASKSSIS 1315
            PVH+LDGS         D+S  DS F  +G        ++H A S    H  N  +SS+ 
Sbjct: 289  PVHVLDGSLGTCIETPSDLSFQDSMFHPVGDIPACPILYSHPAGSTTTDHPTNLPRSSMH 348

Query: 1314 QSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNV 1135
            QSFP +  P      + DDY+SF+H+S+TFS+ +VS L QNP A+AAAS A+ FWP  NV
Sbjct: 349  QSFPFFPPPFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNV 408

Query: 1134 EASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XXX 958
            E+S +    +   FQS Q+++ PSM                AHGLLP+CAP H  F    
Sbjct: 409  ESSADSPACAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPP 468

Query: 957  XXXXXXXXXXSNQGKGVSVERKESSPD-PALGGQQLEPECSEALHEQGSVLKSPMLXXXX 781
                      ++Q      ERKE++PD P L GQ  + E SEA+  Q S  K P L    
Sbjct: 469  ASATAIQSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSASKPPTLSSSD 528

Query: 780  XXXXEGVKLNVGLAA------SETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAME 619
                 G KLN G         S+  +V+   ++K++K VDRSSCGSNTPSSSEIE DA+E
Sbjct: 529  SEESGGTKLNTGPKVTDDELNSKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALE 588

Query: 618  KNADGKEK-EETEENDPFN----RRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSF 454
            K   GKE+ +E + N P +    RR RS++++ DSWKEVS+EGRL FQALF+RE LPQSF
Sbjct: 589  KTEKGKEEPKEADANHPASESNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTREILPQSF 648

Query: 453  SPPH 442
            SPPH
Sbjct: 649  SPPH 652



 Score = 79.7 bits (195), Expect(2) = e-117
 Identities = 51/110 (46%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
 Frame = -3

Query: 449 LHMPKATKNVIKESERTENGLQLDLNVMTWGN-SAQQNGEEDG---KSLNKEEEAL-NIG 285
           +H  + T+      E+  +   LDLN  TWG  S  Q GE++    + +N  EE L  IG
Sbjct: 658 MHQKEDTEEKKNPDEKDGDASLLDLNSKTWGYCSGYQEGEKNAVVPRCVNDGEEGLLTIG 717

Query: 284 LRCGKLKARRTGFKPYKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVS 138
           L  G LKA  TGFKPYKRCS+EAKE R+ +     EEK PKRLR+E E S
Sbjct: 718 LGHGNLKAHLTGFKPYKRCSLEAKESRMATTGGQGEEKGPKRLRLEREAS 767


>ref|XP_007051395.1| Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]
            gi|590720710|ref|XP_007051405.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590720714|ref|XP_007051406.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508703656|gb|EOX95552.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703666|gb|EOX95562.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703667|gb|EOX95563.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 739

 Score =  370 bits (949), Expect(2) = e-117
 Identities = 249/610 (40%), Positives = 321/610 (52%), Gaps = 38/610 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+ KG+PIG++LDIEI               KT A  +A
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTA 114

Query: 1962 SQLGVKDGKIPNPVSS-SCQSKVTVEH----EEPANDEKVENSMEYHEKENCFEAFIPLK 1798
             Q+G KDGK   P+SS  C+  + +E     E P  DEK  N ++ ++ ++C E    L 
Sbjct: 115  -QVGAKDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPIN-LKDNQDDSCSEVVTLLH 172

Query: 1797 KAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERF 1621
            +A C            + A  +N CTFR++VP   E +                      
Sbjct: 173  EANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETI---------------------- 210

Query: 1620 DNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVT-TTQNYPRHV 1444
                  QD  + K SN     L    T H K +   ++ + D  L AD T  TQNYPRHV
Sbjct: 211  ------QDNGTSKASN-----LDNSCTSHEKAAQGQKKDDVDGGLRADETQATQNYPRHV 259

Query: 1443 PVHILDG---------SQDISHADSAFRHMGGTH---------AHQAASGHYDNASKSSI 1318
             VH+LDG         S D+   DS F  MG  H         A  A + H +NA +S+ 
Sbjct: 260  AVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDVHGQTNLFANPAASATTEHQNNAPRST- 318

Query: 1317 SQSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVN 1138
             Q+FP++H P      + +DY+SF+HVS+TFS+LI S L QNP A+AAAS A+ FWP  N
Sbjct: 319  HQAFPTFHPPFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYAN 378

Query: 1137 VEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXX 958
            V++S +    S G F S Q++  PSM                AHGLLPLCAP H GF   
Sbjct: 379  VDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCA 438

Query: 957  XXXXXXXXXXSN-QGKGVSVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLXXX 784
                       N Q     +ERK+++  D ++  QQL+PE SEAL  Q S  KSP     
Sbjct: 439  LASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEYSEALQAQHSASKSPTSSSS 498

Query: 783  XXXXXEGVKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAM 622
                    K+N G+ A++  K   +TE      +KN+K VDRSSCGSNTPSSSE+E D +
Sbjct: 499  DSEACGDAKVNTGVKAADDEKAAAVTEPQDANKTKNRKQVDRSSCGSNTPSSSEVETDVL 558

Query: 621  EK-NADGKEKEETEENDP----FNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQS 457
            EK   D ++ +  + N P     NRR RS +N  DSWKEVS+ GRL FQALFSRE LPQS
Sbjct: 559  EKYEKDKEDAKGADANHPQVECCNRRGRSCSNPSDSWKEVSEGGRLAFQALFSREVLPQS 618

Query: 456  FSPPHAKGNK 427
            FSPPH   NK
Sbjct: 619  FSPPHDGKNK 628



 Score = 81.3 bits (199), Expect(2) = e-117
 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = -3

Query: 383 LDLNVMTWGNSAQQNG-EEDGKSLNKE---EEALNIGLRCGKLKARRTGFKPYKRCSVEA 216
           LDLN  T  + + + G E++G S  ++   E  L IGL   KLKARRTGFKPYKRCSVEA
Sbjct: 652 LDLNSQTVRSCSYRQGVEKNGLSRGEDIVGEGLLTIGLEHAKLKARRTGFKPYKRCSVEA 711

Query: 215 KECRV-SGNSHDEEKCPKRLRVEGEVST 135
           KE +V +  S  EEK PKR+R+EGE ST
Sbjct: 712 KENKVMNAGSQGEEKGPKRIRLEGEAST 739


>dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|219687749|dbj|BAH09385.1|
            PnLHY2 [Populus nigra]
          Length = 764

 Score =  362 bits (928), Expect(2) = e-115
 Identities = 236/602 (39%), Positives = 321/602 (53%), Gaps = 35/602 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKT VQIRSHAQKFF+KLEKEAIVKG+PIG++LDI+I               K   G  A
Sbjct: 55   TKTVVQIRSHAQKFFSKLEKEAIVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPA 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEEPANDEKVENSMEYHEKEN----CFEAFIPLKK 1795
            SQ+G KDGK+    S  C  +V    +EP  ++   N      KEN    C E F  L++
Sbjct: 115  SQVGAKDGKLLTSASFPCCKQVLGLEKEPLPEKLNGNERPTDAKENQDDNCSEVFSLLQE 174

Query: 1794 APCEXXXXXXXXXXXS-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERFD 1618
              C            + D  K    FR++V   S   + +  A++Q S        ++ D
Sbjct: 175  PHCSSVPSVNKNSVPTLDILKKASPFREFV---SSPKEGNHDASNQSSVTVDLGANQKLD 231

Query: 1617 NQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHVPV 1438
            N    QD  + + S   +     EK    K SD+   +   D + A     QNYPRHVPV
Sbjct: 232  NSDVKQDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQA----MQNYPRHVPV 287

Query: 1437 HILDGS---------QDISHADSAFRHMG------GTHAHQAAS---GHYDNASKSSISQ 1312
            H+LDGS          D S  +S F  +G        ++H AAS    H + + +SS+ Q
Sbjct: 288  HVLDGSLGTCMQTPPSDFSFQESIFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQ 347

Query: 1311 SFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVE 1132
            SFPS+  P      + DDY+SF+H+S+TFS+L+VS+L QNP A+AAAS AS FWP  NVE
Sbjct: 348  SFPSFPPPFTPTHHNQDDYRSFLHMSSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVE 407

Query: 1131 ASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XXXX 955
            +S +    + G FQS Q+++ PSM                AHGLLP+CAP H  F     
Sbjct: 408  SSADSPACAQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPLHTSFACPPA 467

Query: 954  XXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXX 775
                     + Q      ERKE++ +P+L GQ  + E +EAL  Q S  KSP +      
Sbjct: 468  SATAIQSVDTGQVSATKTERKETAENPSLQGQIQDQEHTEALQAQNSASKSPKITSSDSE 527

Query: 774  XXEGVKLNV------GLAASETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEKN 613
               G +LN           ++  +V+  +++K++K++DRSSCGSNTPSSSEIE DA+EK 
Sbjct: 528  ESGGPQLNTRPEVIDHELTTKPHEVQDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKA 587

Query: 612  ADG-KEKEETEENDP----FNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFSP 448
              G +E +E + N P     +R  RS++++ DSWKEVS+EGRL FQ LF+RE LPQSFSP
Sbjct: 588  EKGTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQTLFAREVLPQSFSP 647

Query: 447  PH 442
            PH
Sbjct: 648  PH 649



 Score = 83.6 bits (205), Expect(2) = e-115
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGN-SAQQNGEEDGKSLNK---EEEALNIGLRCGKLKARRTGFKP 240
           E+  +   ++LN  TW   S  Q GE++  S  +   EE  L IGL  GKLK RRTGFKP
Sbjct: 669 EKDGDASLINLNTKTWECCSGHQEGEKNALSRCENYGEEGLLTIGLGHGKLKVRRTGFKP 728

Query: 239 YKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVS 138
           YKRCS+EAKE R  +G+   EEK PKRLR+EGE S
Sbjct: 729 YKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEAS 763


>gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]
          Length = 767

 Score =  369 bits (947), Expect(2) = e-115
 Identities = 232/609 (38%), Positives = 319/609 (52%), Gaps = 37/609 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFFTKLEKEA++KG+PI ++LDIEI               KTS  + +
Sbjct: 55   TKTAVQIRSHAQKFFTKLEKEAVIKGVPISQALDIEIPPPRPKRKPSNPYPRKTSVAVPS 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVE------HEEPANDEKVENSMEYHEKENCFEAFIPL 1801
            SQ+G+KDGK+  P SS C+ +   +       E+P  +EK+ +  E   K+NC + F   
Sbjct: 115  SQVGIKDGKLSTPFSSICEDRNLFDLEKEPIAEKPGRNEKLGSVQENQNKKNCCQGFTLF 174

Query: 1800 KKAPCEXXXXXXXXXXXSDAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ-MER 1624
            K+                  P   CT  + VP +   ++ + TA S ++ E    Q ++ 
Sbjct: 175  KEGASAPSLSLGKSLQTLAEPAGSCTLNESVPATKGVINHNVTAKSFLTVESKEHQKLDI 234

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTA-DVTTTQNYPRH 1447
             + +Q FQ   S    +        EK    +  D+  Q ++    +  D+    NYPRH
Sbjct: 235  LNAKQSFQSNSSCNTFDGGKSCQSNEKLAQDEKKDQPSQPDHFGEFSRNDMQVPHNYPRH 294

Query: 1446 VPVHILDGS---------QDISHADSAFRHMGGTHA---------HQAASGHYDNASKSS 1321
            VPVHILDG+          D+ + +S    +GG              A S H+ NA+ SS
Sbjct: 295  VPVHILDGALGVNGAQTTPDMFYPESVSHQIGGVQGLSNLYTNPTSSATSEHHSNAAMSS 354

Query: 1320 ISQSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSV 1141
            I QSFP +H P F P++  DDY+SF+ +S+TFS+LI SAL QNP A+AAAS A+++WP  
Sbjct: 355  IRQSFPCFH-PNFTPIRDPDDYRSFLQLSSTFSSLIFSALLQNPAAHAAASFAASYWPYA 413

Query: 1140 NVEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXX 961
            N+EA  +  T +     ++Q+++ PSM                AHGLLPLC+P+H     
Sbjct: 414  NMEAPVDSPTGNT----ASQINSAPSMAAIAAATVAAATAWWAAHGLLPLCSPFHSSSTC 469

Query: 960  XXXXXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXX 781
                         Q      E +E S + +   QQ  P+CSEALHEQ S  + P      
Sbjct: 470  VPTSATSMQMDPCQPSVEKNEGREGSHN-SPHAQQAVPDCSEALHEQHSASELPTSPSSE 528

Query: 780  XXXXEGVKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAME 619
                EG KL  GL A  T +   +TE       K +K VDRSSCGSNTPSSS++E DA+E
Sbjct: 529  SEESEGRKLKTGLTADNTEQGAAVTEIHEPNTGKGRKQVDRSSCGSNTPSSSDLETDALE 588

Query: 618  KNADGKEKEETEE-----NDPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSF 454
            K+  GKE+ +         D  NRR R+  +  DSWKEVS+ GR+ FQALF+REKLPQSF
Sbjct: 589  KDQKGKEEPQEPNVNLLAGDAGNRRGRNCISPNDSWKEVSEGGRIAFQALFTREKLPQSF 648

Query: 453  SPPHAKGNK 427
            SP +   NK
Sbjct: 649  SPSNDPKNK 657



 Score = 75.5 bits (184), Expect(2) = e-115
 Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
 Frame = -3

Query: 416 KESERTENGLQLDLNVMTWGNSAQQNGEEDGKSL--NKE--EEALNI-GLRCGKLKARRT 252
           K  E+  +G QLDLN       +     ED   +  NKE  E+ L +  L  G+LKARRT
Sbjct: 668 KPDEKGLSGSQLDLNDQASDICSSHQAVEDNVLVIGNKEDAEKCLPMMELGQGRLKARRT 727

Query: 251 GFKPYKRCSVEAKECRVSGNS-HDEEKCPKRLRVEGEVS 138
           GFKPYKRCS+EAK+ RV+ +S  DEEK  KRLR+EGE S
Sbjct: 728 GFKPYKRCSLEAKDSRVASSSCQDEEKSAKRLRLEGEAS 766


>ref|XP_007051399.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
            gi|590720702|ref|XP_007051403.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|590720706|ref|XP_007051404.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|508703660|gb|EOX95556.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
          Length = 707

 Score =  362 bits (928), Expect(2) = e-114
 Identities = 244/592 (41%), Positives = 315/592 (53%), Gaps = 20/592 (3%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFF+KLEKEA+ KG+PIG++LDIEI               KT A  +A
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTA 114

Query: 1962 SQLGVKDGKIPNPVSS-SCQSKVTVEH----EEPANDEKVENSMEYHEKENCFEAFIPLK 1798
             Q+G KDGK   P+SS  C+  + +E     E P  DEK  N ++ ++ ++C E    L 
Sbjct: 115  -QVGAKDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPIN-LKDNQDDSCSEVVTLLH 172

Query: 1797 KAPCEXXXXXXXXXXXSDAP-KNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERF 1621
            +A C            + A  +N CTFR++VP   E +                      
Sbjct: 173  EANCSSVSSVNKNSIPTSAALRNSCTFREFVPSLKETI---------------------- 210

Query: 1620 DNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVT-TTQNYPRHV 1444
                  QD  + K SN     L    T H K +   ++ + D  L AD T  TQNYPRHV
Sbjct: 211  ------QDNGTSKASN-----LDNSCTSHEKAAQGQKKDDVDGGLRADETQATQNYPRHV 259

Query: 1443 PVHILDGSQDISHADSAFRHMGGTHAHQAASGHYDNASKSSISQSFPSYHHPVFAPVQSL 1264
             VH+LDGS              GT A  A + H +NA +S+  Q+FP++H P      + 
Sbjct: 260  AVHVLDGSL-------------GT-AASATTEHQNNAPRST-HQAFPTFHPPFTHVCPNP 304

Query: 1263 DDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVEASTEPSTASAGAFQST 1084
            +DY+SF+HVS+TFS+LI S L QNP A+AAAS A+ FWP  NV++S +    S G F S 
Sbjct: 305  EDYRSFLHVSSTFSSLIASTLLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSR 364

Query: 1083 QVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXXXXXXXXXXSN-QGKGV 907
            Q++  PSM                AHGLLPLCAP H GF              N Q    
Sbjct: 365  QMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPAT 424

Query: 906  SVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXXXXEGVKLNVGLAASE 730
             +ERK+++  D ++  QQL+PE SEAL  Q S  KSP             K+N G+ A++
Sbjct: 425  KMERKDNNDQDLSMQDQQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVNTGVKAAD 484

Query: 729  TAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAMEK-NADGKEKEETEENDP 571
              K   +TE      +KN+K VDRSSCGSNTPSSSE+E D +EK   D ++ +  + N P
Sbjct: 485  DEKAAAVTEPQDANKTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHP 544

Query: 570  ----FNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFSPPHAKGNK 427
                 NRR RS +N  DSWKEVS+ GRL FQALFSRE LPQSFSPPH   NK
Sbjct: 545  QVECCNRRGRSCSNPSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNK 596



 Score = 81.3 bits (199), Expect(2) = e-114
 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = -3

Query: 383 LDLNVMTWGNSAQQNG-EEDGKSLNKE---EEALNIGLRCGKLKARRTGFKPYKRCSVEA 216
           LDLN  T  + + + G E++G S  ++   E  L IGL   KLKARRTGFKPYKRCSVEA
Sbjct: 620 LDLNSQTVRSCSYRQGVEKNGLSRGEDIVGEGLLTIGLEHAKLKARRTGFKPYKRCSVEA 679

Query: 215 KECRV-SGNSHDEEKCPKRLRVEGEVST 135
           KE +V +  S  EEK PKR+R+EGE ST
Sbjct: 680 KENKVMNAGSQGEEKGPKRIRLEGEAST 707


>ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prunus persica]
            gi|462415391|gb|EMJ20128.1| hypothetical protein
            PRUPE_ppa001765mg [Prunus persica]
          Length = 768

 Score =  353 bits (906), Expect(2) = e-113
 Identities = 235/608 (38%), Positives = 322/608 (52%), Gaps = 42/608 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGI-- 1969
            TKTAVQIRSHAQKFF+KLEKEA  KG+  G+S+DI+I               K+ +    
Sbjct: 55   TKTAVQIRSHAQKFFSKLEKEAHNKGVLAGQSIDIDIPPPRPKRKPSNPYPRKSCSAAPT 114

Query: 1968 -SASQLGVKDGKIPNPVSSS-CQSKVTVEHE----EPANDEKVENSMEYHEKENCFEAFI 1807
             + S +  KDGK+ +  SSS C+  + +E E     P  +E   N  E ++ ENC E   
Sbjct: 115  WATSHVAAKDGKLLSSTSSSHCKQVLDLEKEPLDERPTKEENPRNGKE-NQDENCSEVLT 173

Query: 1806 PLKKAPCEXXXXXXXXXXXSD-APKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQ- 1633
             L +  C            +  A +N CTFR++VP   E + QD T  S ++TE  G+Q 
Sbjct: 174  MLLEDHCSSVSSANKNSIPTQVALRNACTFREFVPSPKEVISQDVTNDSYVTTELNGNQN 233

Query: 1632 MERFDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYP 1453
            +++ D ++  QD  +   S   +     +K +  + +D+L  +   D +      TQ YP
Sbjct: 234  LKKNDAKKIVQDNGTSGASESENSNAFHKKLVQGEKADDLNCALPTDGMQG----TQTYP 289

Query: 1452 RHVPVHILDGS---------QDISHADSAFRHMGGTHAH---------QAASGHYDNASK 1327
            R+VPVH+LDGS          D+S AD+AF  MG  H              + H  N S+
Sbjct: 290  RNVPVHVLDGSLGACNQITPADMSFADTAFHPMGKVHGQPNLFANPTASTTTEHESNTSR 349

Query: 1326 SSISQSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWP 1147
            SS+ QSFP++H P         DYQSF+H+S+TFS+LIVS+L QNP A+AAAS A+ FWP
Sbjct: 350  SSVHQSFPAFHPPFTPLHHGQKDYQSFLHMSSTFSSLIVSSLLQNPAAHAAASFAATFWP 409

Query: 1146 SVNVEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF 967
              N E + +      G F S Q+++ PSM                +HGLLPLCAP    F
Sbjct: 410  YANAENTEDSPACPPGGFPSRQMNSPPSMAAIAAATVAAASAWWASHGLLPLCAPVQTAF 469

Query: 966  -XXXXXXXXXXXXXSNQGKGVSVERKESSPD-PALGGQQLEPECSEALHEQGSVLKSPML 793
                          + +    ++ER E+S   P+L  QQ++PE  EA+  Q    KSP +
Sbjct: 470  SCPPVSMTGVPSMDTGEAPAANIERGENSLQIPSLQDQQVDPEHLEAVEAQHPASKSPSM 529

Query: 792  XXXXXXXXEGVKLNVGLAASETAKVEVMTE-------SKNKKVVDRSSCGSNTPSSSEIE 634
                     G + N  L A+   KV   T+       +K++K VDRSSCGSNTPSSSE+E
Sbjct: 530  -SSSHSDNGGAEPNTVLKAAADEKVVASTDEVNDSNNAKSRKQVDRSSCGSNTPSSSEVE 588

Query: 633  ADAMEKNADGKEK-EETEENDPFN----RRCRSATNVGDSWKEVSQEGRLTFQALFSREK 469
             DA+EK   GKE+ +E + N P +    RR RS  N+ D WKEVS+EGR+ FQALFSRE 
Sbjct: 589  TDALEKQEKGKEELKEPDLNHPASDSTYRRSRSIINISDPWKEVSEEGRMAFQALFSREV 648

Query: 468  LPQSFSPP 445
            LPQSFSPP
Sbjct: 649  LPQSFSPP 656



 Score = 85.9 bits (211), Expect(2) = e-113
 Identities = 53/95 (55%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGNSAQQNGEEDGKSL---NKEEEALNIGLRCGKLKARRTGFKPY 237
           E+ E+   LDLN  TW   +   G E   S    N  E  L IGL  GKLKARRTGFKPY
Sbjct: 674 EKDEDASLLDLNKKTWVPFSCHLGVEKNVSPVGDNDAEGLLTIGLSQGKLKARRTGFKPY 733

Query: 236 KRCSVEAKECRVSGN-SHDEEKCPKRLRVEGEVST 135
           KRCSVEA E R +   SH EEK PKRLR+EGE  T
Sbjct: 734 KRCSVEANENRAANAISHCEEKGPKRLRLEGEAQT 768


>ref|XP_002320238.2| hypothetical protein POPTR_0014s10260g [Populus trichocarpa]
            gi|550323895|gb|EEE98553.2| hypothetical protein
            POPTR_0014s10260g [Populus trichocarpa]
          Length = 695

 Score =  344 bits (883), Expect(2) = e-110
 Identities = 226/587 (38%), Positives = 313/587 (53%), Gaps = 36/587 (6%)
 Frame = -2

Query: 2094 KLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISASQLGVKDGKIPNPVSS 1915
            +LEKEA+VKG+PIG++LDI+I               K   G  ASQ+G KDGK+    S 
Sbjct: 2    ELEKEAVVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAKDGKLLTSASF 61

Query: 1914 SCQSKVTVEHEEPA-----NDEKVENSMEYHEKENCFEAFIPLKKAPCEXXXXXXXXXXX 1750
             C  +V    +EP       DE+  N+ E ++ +NC E F  L++  C            
Sbjct: 62   PCCKQVLGLEKEPLPEKLNGDERPTNAKE-NQDDNCSEVFSLLQEPHCSSVPSINKNSVP 120

Query: 1749 S-DAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERFDNQQPFQDKLSLKISN 1573
            + D  K    FR++V    E  + D +  S ++ E   +Q  + DN    QD  + + S 
Sbjct: 121  TLDILKKASPFREFVSSPKEG-NHDASNQSSVTVELGANQ--KLDNSDVKQDNSTSEFSK 177

Query: 1572 DADPFLLQEKTMHAKYSDELRQSENDDTLTADVTTTQNYPRHVPVHILDGS--------- 1420
              +     EK    K SD+   +   D + A     QNYPRHVPVH+LDGS         
Sbjct: 178  SENFCSFSEKLFQQKKSDDFIGALRTDGMQA----MQNYPRHVPVHVLDGSLGTCMQTPP 233

Query: 1419 QDISHADSAFRHMG------GTHAHQAAS---GHYDNASKSSISQSFPSYHHPVFAPVQS 1267
             D S  +S F  +G        ++H AAS    H + + +SS+ QSFPS+  P      +
Sbjct: 234  SDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSFPPPFTPTHHN 293

Query: 1266 LDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVEASTEPSTASAGAFQS 1087
             DDY+SF+H+S+TFS+L+VS+L QNP A+AAAS AS FWP  NVE+S +    + G FQS
Sbjct: 294  QDDYRSFLHISSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVESSADSPACAQGGFQS 353

Query: 1086 TQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF-XXXXXXXXXXXXXSNQGKG 910
             Q+++ PSM                AHGLLP+CAP H  F              + Q   
Sbjct: 354  RQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPLHTSFACPPASATAIQSVDTGQVSA 413

Query: 909  VSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXXXXEGVKLNVG----- 745
               ERKE++ +P+L GQ   PE +EAL  Q S  KSP +         G KLN G     
Sbjct: 414  TKTERKETAENPSLQGQIQGPEHTEALQAQNSASKSPKITSSDSEESGGPKLNTGPEVID 473

Query: 744  -LAASETAKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEKNADG-KEKEETEENDP 571
                ++  +V+  +++K++K++DRSSCGSNTPSSSEIE DA+EK   G +E +E + N P
Sbjct: 474  HELTTKPHEVQDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKAEKGTEEPKEDDANHP 533

Query: 570  ----FNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFSPPH 442
                 +R  RS++++ DSWKEVS+EGRL FQALF+RE LPQSFSPPH
Sbjct: 534  ASESSSRHSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFSPPH 580



 Score = 85.5 bits (210), Expect(2) = e-110
 Identities = 51/95 (53%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
 Frame = -3

Query: 407 ERTENGLQLDLNVMTWGN-SAQQNGEEDGKSLNK---EEEALNIGLRCGKLKARRTGFKP 240
           E+  +   ++LN  TW   S  Q GE++  S  +   EEE L IGL  GKLK RRTGFKP
Sbjct: 600 EKDGDASLINLNSKTWECCSGHQEGEKNALSRCENYGEEELLTIGLGHGKLKVRRTGFKP 659

Query: 239 YKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVS 138
           YKRCS+EAKE R  +G+   EEK PKRLR+EGE S
Sbjct: 660 YKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEAS 694


>ref|NP_001235187.1| late elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max] gi|158999368|gb|ABW87008.1| late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max]
          Length = 749

 Score =  352 bits (902), Expect(2) = e-108
 Identities = 235/610 (38%), Positives = 317/610 (51%), Gaps = 39/610 (6%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFFTKLEKEA+VKG+PIG++LDI+I               KT  G ++
Sbjct: 55   TKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRIGTTS 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEEPAND----EKVENSMEYHEKENCFEAFIPLKK 1795
               G KDGK+ N V SS  ++     +EP  +    ++   +++ ++ EN  + F  L++
Sbjct: 115  LHSGAKDGKL-NLVESSHVNQALDLKKEPLPEKHDLDEGLTTVKENKDENHAKVFTLLQE 173

Query: 1794 APCEXXXXXXXXXXXSDAPK-NPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERFD 1618
             PC               P  NPC F++  P   E + +DE   S ++ EP   ++E  D
Sbjct: 174  VPCSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFVTVEPENGKLEIND 233

Query: 1617 NQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTADVTT-----TQNYP 1453
             +Q              D  L     +H K    L Q+E  D L  ++T       QNYP
Sbjct: 234  GKQTN--------GTSKDSRLEDSDALHMK----LVQNEKPDGLDCELTIDGMQGNQNYP 281

Query: 1452 RHVPVHILDG---------SQDISHADSAFRHMGGTH---------AHQAASGHYDNASK 1327
            RHV VH++DG         SQD+   DS F+ +GG +         A    S   +N ++
Sbjct: 282  RHVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTAR 341

Query: 1326 SSISQSFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWP 1147
            SS+ QSF  Y  P F    + DDYQSF+H+S+TFSNLIVS L QNP A+AAAS A+ FWP
Sbjct: 342  SSVHQSFLPY--PPFTQ-HNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWP 398

Query: 1146 SVNVEASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGF 967
              N E S      S G F + Q+ + PS+                AHGLLPLCAP H  F
Sbjct: 399  YANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSF 458

Query: 966  XXXXXXXXXXXXXSNQGKGVSVERKESS-PDPALGGQQLEPECSEALHEQGSVLKSPMLX 790
                         + +   +  E+++++  +P L  Q L+PE SEA   Q S  KSP   
Sbjct: 459  ACPASVTTVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSP-AA 517

Query: 789  XXXXXXXEGVKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEAD 628
                      KLN     ++    + ++E      +K +K VDRSSCGSNT SSS++E D
Sbjct: 518  TLSDSESGDAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASSSDVETD 577

Query: 627  AMEKNADGKEKEETEEND----PFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQ 460
            A+EK   GKE+ E  + +     F+ R RS +N+ DSWKEVS+EGRL FQALFSRE LPQ
Sbjct: 578  ALEKGEKGKEEPEIPDANQLAIEFSNRRRSVSNLTDSWKEVSEEGRLAFQALFSREVLPQ 637

Query: 459  SFSPPHAKGN 430
            SFSPPHA  N
Sbjct: 638  SFSPPHALKN 647



 Score = 71.2 bits (173), Expect(2) = e-108
 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
 Frame = -3

Query: 440 PKATKNVIKESERTENGLQL--DLNVMTWGNSAQQNGEEDGKSL---NKEEEALNIGLRC 276
           P A KN   + +   +  Q   D +    G     N E   K+L      E  L IGL  
Sbjct: 642 PHALKNTDHQMDNANDNKQNIDDKDEDLDGKKCSSNYEAMQKNLLFVENNEGLLTIGLGQ 701

Query: 275 GKLKARRTGFKPYKRCSVEAKECRVSGNSHD-EEKCPKRLRVEGEVST 135
           GKLK  RTGFKPYKRCS+EAKE RV  +S+  EE+  KR+R+EGE ST
Sbjct: 702 GKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGCKRIRLEGETST 749


>ref|XP_006352623.1| PREDICTED: protein LHY-like [Solanum tuberosum]
          Length = 763

 Score =  345 bits (885), Expect(2) = e-108
 Identities = 230/606 (37%), Positives = 312/606 (51%), Gaps = 34/606 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFFTKLEKEA+ KG+PI ++LDIEI               K S  + +
Sbjct: 55   TKTAVQIRSHAQKFFTKLEKEALTKGVPISQALDIEIPPPRPKRKPSNPYPRKMSVAVPS 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHE-EPAND-----EKVENSMEYHEKENCFEAFIPL 1801
             Q+G KDGK   P SS C+ +   + E EP  +     EK+ N  E   K+NC + F   
Sbjct: 115  LQVGAKDGKFSTPFSSICEERNLFDLEKEPITEKAGGNEKLGNVQETQNKKNCSQGFTLF 174

Query: 1800 KKAPCEXXXXXXXXXXXSDAPKNPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQM-ER 1624
            K+                 AP N C F + VP++   ++ D    S ++ E    Q  E 
Sbjct: 175  KEGASAASMSSGKSLQTHVAPANACAFSESVPVTKGEVNHDIANKSFLTVESNEHQQAEI 234

Query: 1623 FDNQQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTA-DVTTTQNYPRH 1447
             D +Q FQ   S    +        EK    +      Q ++    +  D+    NYPRH
Sbjct: 235  LDIRQSFQGNSSCNTFDGGKSCQSSEKLAQGEKKHPPSQPDHLGEFSRNDMQVLHNYPRH 294

Query: 1446 VPVHILDG------SQDISHADSAFRHMGGTH---------AHQAASGHYDNASKSSISQ 1312
            VPVHILDG      S D+ + +S  + +GG           A  A S H+ N+ +SSI Q
Sbjct: 295  VPVHILDGTNGSQISPDMFNHESTSQQIGGVPGLPNLYSNPASSATSEHHSNSPQSSIHQ 354

Query: 1311 SFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVE 1132
            SF  +H P+F P++  DDY+SF+ +S++FS+LIVSAL QNP A+ AAS A++FWP  N+E
Sbjct: 355  SFSCFH-PIFTPIRDPDDYRSFLQLSSSFSSLIVSALLQNPAAHVAASFAASFWPYANME 413

Query: 1131 ASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXX 952
              T+  T +     ++Q+++ PS+                AHGLLPLC+ +   F     
Sbjct: 414  RPTDSPTDNT----ASQINSAPSIAAIAAATVAAATAWWAAHGLLPLCSQFQSSFTCVPT 469

Query: 951  XXXXXXXXSNQGKGVSVERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXXXXX 772
                    + Q +    E +E + + +   Q+  PECSEAL EQ S  K P         
Sbjct: 470  SATSMQVDACQPRVDKNEGREGTHN-SPHAQEPVPECSEALQEQQSGSKLPPSPSSESEE 528

Query: 771  XEGVKLNVGLAASET------AKVEVMTESKNKKVVDRSSCGSNTPSSSEIEADAMEKNA 610
             EG KL +GL A+ T       K+      K  K VDRSSCGSNTPSSSEIE DA+EK+ 
Sbjct: 529  SEGRKLQIGLTATGTEQGAAVTKINEPNTEKGGKQVDRSSCGSNTPSSSEIETDALEKDD 588

Query: 609  DGKEKEETEE-----NDPFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFSPP 445
             GKE+ +         +   RRCR+  +  +SWKEVS+EGR+ FQALF+RE LPQSFSP 
Sbjct: 589  KGKEEPQESNINLLVGEAAIRRCRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPS 648

Query: 444  HAKGNK 427
                NK
Sbjct: 649  LDLKNK 654



 Score = 76.3 bits (186), Expect(2) = e-108
 Identities = 48/99 (48%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
 Frame = -3

Query: 416 KESERTENGLQLDLNVMTWGNSAQQNGEEDGKSL--NKEEEALNIGLRCG--KLKARRTG 249
           +  E+ + G QLDLN +     +     ED   L  NK+ E     +  G  +LKARRTG
Sbjct: 665 RPDEKVQCGPQLDLNDLASSICSSHQTMEDNVLLIGNKDVEKCLPMIELGQVRLKARRTG 724

Query: 248 FKPYKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVST 135
           FKPYKRCS+EA + RV S N  DEEK  KRLR+EGE ST
Sbjct: 725 FKPYKRCSLEANDSRVTSSNCQDEEKSSKRLRLEGEAST 763


>ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine max]
            gi|571464896|ref|XP_006583195.1| PREDICTED: protein LHY
            isoform X2 [Glycine max] gi|571464898|ref|XP_006583196.1|
            PREDICTED: protein LHY isoform X3 [Glycine max]
            gi|571464900|ref|XP_006583197.1| PREDICTED: protein LHY
            isoform X4 [Glycine max] gi|571464902|ref|XP_006583198.1|
            PREDICTED: protein LHY isoform X5 [Glycine max]
            gi|571464905|ref|XP_006583199.1| PREDICTED: protein LHY
            isoform X6 [Glycine max] gi|571464907|ref|XP_006583200.1|
            PREDICTED: protein LHY isoform X7 [Glycine max]
            gi|571464909|ref|XP_006583201.1| PREDICTED: protein LHY
            isoform X8 [Glycine max] gi|571464911|ref|XP_006583202.1|
            PREDICTED: protein LHY isoform X9 [Glycine max]
          Length = 750

 Score =  343 bits (881), Expect(2) = e-107
 Identities = 233/608 (38%), Positives = 305/608 (50%), Gaps = 36/608 (5%)
 Frame = -2

Query: 2142 TKTAVQIRSHAQKFFTKLEKEAIVKGIPIGKSLDIEIXXXXXXXXXXXXXXXKTSAGISA 1963
            TKTAVQIRSHAQKFFTKLEKEA+VKG+PIGK+LDI+I               KT  G ++
Sbjct: 55   TKTAVQIRSHAQKFFTKLEKEALVKGVPIGKALDIDIPPPRPKRKPNNPYPRKTRIGSAS 114

Query: 1962 SQLGVKDGKIPNPVSSSCQSKVTVEHEEPANDEKVEN---SMEYHEKENCFEAFIPLKKA 1792
               G KDGK+    SS     + +E E       ++    +++ ++ EN    F  L++ 
Sbjct: 115  LHSGAKDGKLNLVESSHVNQALNLEKEPLPEKHDLDEGITTVKENKDENRGAVFTLLQEV 174

Query: 1791 PCEXXXXXXXXXXXSDAPK-NPCTFRQYVPLSSEAMDQDETAASQISTEPTGSQMERFDN 1615
            PC               P  NPC F++  P   E + +DE   S ++ E     +E  D 
Sbjct: 175  PCSSVSSANKSSITMSVPLGNPCAFKEITPSVKEVIPRDEKTESFVTIELENGTLEINDR 234

Query: 1614 QQPFQDKLSLKISNDADPFLLQEKTMHAKYSDELRQSENDDTLTAD-VTTTQNYPRHVPV 1438
            +Q              D  L     +H K     +    D  LT D +   QNYPRHV V
Sbjct: 235  KQTN--------GTSKDSTLENSDALHMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTV 286

Query: 1437 HILDG---------SQDISHADSAFRHMGGTHAHQAA---------SGHYDNASKSSISQ 1312
            H++DG         SQD+   DS F+ +GG +  Q           S   +N  +SS+ Q
Sbjct: 287  HVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQQNVFTNSAPSNTSESQNNTVRSSVHQ 346

Query: 1311 SFPSYHHPVFAPVQSLDDYQSFMHVSATFSNLIVSALSQNPVAYAAASLASNFWPSVNVE 1132
            SF  Y  P F    + DD QSF H+S+TFSNLI+S L QNP A+AAAS A+ FWP  N E
Sbjct: 347  SFLPY--PPFTQ-HNQDDCQSFFHMSSTFSNLIISTLMQNPAAHAAASFAATFWPYANPE 403

Query: 1131 ASTEPSTASAGAFQSTQVSTTPSMGXXXXXXXXXXXXXXXAHGLLPLCAPYHPGFXXXXX 952
             S      S G F + Q+ + PS+                AHGLLPLCAP H  F     
Sbjct: 404  TSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSF-ACSP 462

Query: 951  XXXXXXXXSNQGKGVSV---ERKESSPDPALGGQQLEPECSEALHEQGSVLKSPMLXXXX 781
                     N G+  ++   + K +  +P L  Q L+PE SEA   Q S  KSP      
Sbjct: 463  ASVTAVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSP-AAILS 521

Query: 780  XXXXEGVKLNVGLAASETAKVEVMTE------SKNKKVVDRSSCGSNTPSSSEIEADAME 619
                   KLN    A++    + + E      +K +K VDRSSCGS+T SSS++E DA+E
Sbjct: 522  DSESGDAKLNTSSKATDHETNKTIPEHLDSNKTKGRKPVDRSSCGSHTASSSDVETDALE 581

Query: 618  KNADGKEKEETEEND----PFNRRCRSATNVGDSWKEVSQEGRLTFQALFSREKLPQSFS 451
            K   GKE+ ET + +     F+ R RS +N+ DSWKEVS+EGRL FQALFSRE LPQSFS
Sbjct: 582  KGEKGKEEPETPDANQLAIDFSNRRRSVSNLTDSWKEVSEEGRLAFQALFSREVLPQSFS 641

Query: 450  PPHAKGNK 427
            PPHA  NK
Sbjct: 642  PPHALKNK 649



 Score = 73.2 bits (178), Expect(2) = e-107
 Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
 Frame = -3

Query: 440 PKATKNVIKESERTENGLQL--DLNVMTWGNSAQQNGEEDGKSL---NKEEEALNIGLRC 276
           P A KN  ++ +   N  Q   D +          N E   K+L      E  L IGL  
Sbjct: 643 PHALKNKNQQMDNANNNKQNIDDKDEDPDSKKCSSNYEAMQKNLPFVENNEGLLTIGLGQ 702

Query: 275 GKLKARRTGFKPYKRCSVEAKECRV-SGNSHDEEKCPKRLRVEGEVST 135
           GKLK RRTGFKPYKRCS+EAKE RV + N+  EE+  KR+R+EGE ST
Sbjct: 703 GKLKTRRTGFKPYKRCSMEAKENRVGASNNQGEEQGCKRIRLEGETST 750