BLASTX nr result
ID: Mentha22_contig00011255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00011255
(512 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus... 169 4e-40
gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis] 156 3e-36
gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea] 152 5e-35
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,... 151 8e-35
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun... 149 4e-34
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [... 145 7e-33
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ... 145 7e-33
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 145 7e-33
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [... 145 7e-33
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,... 144 1e-32
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,... 143 3e-32
gb|AFK38759.1| unknown [Lotus japonicus] 142 6e-32
ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis t... 141 8e-32
emb|CAB60192.1| putative sigma-like transcription factor [Arabid... 141 8e-32
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 141 1e-31
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 141 1e-31
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 141 1e-31
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 141 1e-31
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 141 1e-31
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 141 1e-31
>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
Length = 559
Score = 169 bits (428), Expect = 4e-40
Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN P++EDIAA AG++VE++++L YT+RVPLSMQ+PVWMDQ TTFQEITADT ++ PDV
Sbjct: 418 GNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDV 477
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
G +KQ+MRQH RNLLSVLNPRERKIIR RFGI+DG+Q
Sbjct: 478 GASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESR 537
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL+S GL AYA+ML+
Sbjct: 538 ALYKLKQCLSSHGLSAYAEMLV 559
>gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 543
Score = 156 bits (394), Expect = 3e-36
Identities = 81/142 (57%), Positives = 94/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN NPS+ED+A GITVE++ KL Y R+PLSMQQPVW DQSTTFQE+TADT I+ PDV
Sbjct: 402 GNHNPSKEDLATRVGITVEKLNKLLYMTRIPLSMQQPVWADQSTTFQEVTADTRIEIPDV 461
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQ+MRQHVR LL LN RER+IIR RFGI+DG Q
Sbjct: 462 SVAKQMMRQHVRGLLRSLNVRERQIIRLRFGIEDGNQKSLSEIGRMYGLSKERVRQLESR 521
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL SQ LEAYAD+++
Sbjct: 522 ALYKLKQCLGSQDLEAYADLIV 543
>gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea]
Length = 164
Score = 152 bits (384), Expect = 5e-35
Identities = 76/142 (53%), Positives = 95/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
G NPS+E++A+CAG++VE+++ L T R PLS+QQPVW DQ+TTF EITAD ++ PDV
Sbjct: 23 GKSNPSKEELASCAGMSVEKLDALLRTTRTPLSLQQPVWSDQATTFLEITADMEVEAPDV 82
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
TK LMR+H RNLLS LNPRERKI+R RFG++DGKQ
Sbjct: 83 AATKHLMRRHTRNLLSFLNPRERKILRLRFGLEDGKQRSLSDIGNGLGLTKERIRQLENR 142
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCLN+QGL AY D+LI
Sbjct: 143 AMYKLKQCLNTQGLAAYTDLLI 164
>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Cucumis sativus] gi|449482444|ref|XP_004156283.1|
PREDICTED: RNA polymerase sigma factor sigF,
chloroplastic-like [Cucumis sativus]
Length = 562
Score = 151 bits (382), Expect = 8e-35
Identities = 75/141 (53%), Positives = 98/141 (69%), Gaps = 17/141 (12%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN PS+E++AA GITVER +KL + +R+P S+QQPVW DQ TTFQEITAD+ +DTPDV
Sbjct: 421 GNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDV 480
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V ++LMR+H+RNLLS+L+P+ER+IIR RFGI+DG++
Sbjct: 481 SVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENR 540
Query: 312 XXXXLKQCLNSQGLEAYADML 374
LK+C NSQGL AYAD+L
Sbjct: 541 ALYKLKRCCNSQGLGAYADLL 561
>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
gi|462400636|gb|EMJ06193.1| hypothetical protein
PRUPE_ppa003513mg [Prunus persica]
Length = 568
Score = 149 bits (376), Expect = 4e-34
Identities = 77/142 (54%), Positives = 95/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN NP++E++A GITVE++EKL Y R+PLSMQQPVW DQ TTFQE+TADT ++ PDV
Sbjct: 427 GNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDV 486
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVR+LLS+LN RER+IIR R+GI+DGKQ
Sbjct: 487 SVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESR 546
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
L+Q L SQGL AY +L+
Sbjct: 547 AFLKLRQSLGSQGLGAYGPLLV 568
>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
rpoD, putative [Theobroma cacao]
Length = 568
Score = 145 bits (365), Expect = 7e-33
Identities = 75/142 (52%), Positives = 93/142 (65%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN PS+E++A GITVE+++KL +T R+PLSMQQ VW+DQ TFQE+T DT I+ PDV
Sbjct: 427 GNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVWVDQDITFQEVTPDTGIEIPDV 486
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLLSVL+PRER II+ RFGI++ K+
Sbjct: 487 SVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEESKENSLSEIGNMFGLSKERVRQLESR 546
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCLN GL AY D+L+
Sbjct: 547 ALYKLKQCLNKHGLGAYVDLLV 568
>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
Length = 572
Score = 145 bits (365), Expect = 7e-33
Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
G+ +P++E+IA GIT+E++++L R+PLSMQQPVW DQ TTFQE+TADT I+ PDV
Sbjct: 431 GHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDV 490
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDG-----------------KQXXXXXX 311
V KQLMRQHVRNLL VL P+ER+IIR RFGI DG +
Sbjct: 491 SVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQR 550
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL+S GLE+Y D+L+
Sbjct: 551 ALHKLKQCLSSHGLESYTDLLV 572
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 145 bits (365), Expect = 7e-33
Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
G+ +P++E+IA GIT+E++++L R+PLSMQQPVW DQ TTFQE+TADT I+ PDV
Sbjct: 420 GHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDV 479
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDG-----------------KQXXXXXX 311
V KQLMRQHVRNLL VL P+ER+IIR RFGI DG +
Sbjct: 480 SVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQR 539
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL+S GLE+Y D+L+
Sbjct: 540 ALHKLKQCLSSHGLESYTDLLV 561
>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 548
Score = 145 bits (365), Expect = 7e-33
Identities = 75/142 (52%), Positives = 95/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN NP++E++A GIT R+E+L Y AR+PLSMQQ VW DQ TTFQEITAD ++ P++
Sbjct: 407 GNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPEL 466
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMR+HV +LL++LNPRERKIIR R+GI+DGK+
Sbjct: 467 CVAKQLMRKHVLSLLNILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESR 526
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL S GLEAYAD+L+
Sbjct: 527 ALYKLKQCLASHGLEAYADLLV 548
>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Solanum lycopersicum]
Length = 563
Score = 144 bits (363), Expect = 1e-32
Identities = 74/141 (52%), Positives = 94/141 (66%), Gaps = 17/141 (12%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GNR+P++EDIA+CAG++VER++ L R PLSMQQ VW DQ TTFQEITAD I+ P++
Sbjct: 422 GNRHPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPEL 481
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQXXXXXXXXXX------------- 323
V+KQLMR+H+R LL+VL+P+ERKIIR RFGI DGK
Sbjct: 482 SVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETR 541
Query: 324 ----LKQCLNSQGLEAYADML 374
LKQ LN GL+AY+D+L
Sbjct: 542 ALYKLKQNLNKHGLDAYSDLL 562
>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Solanum tuberosum]
Length = 562
Score = 143 bits (360), Expect = 3e-32
Identities = 74/141 (52%), Positives = 93/141 (65%), Gaps = 17/141 (12%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GNR P++EDIA+CAG++VER++ L R PLSMQQ VW DQ TTFQEITAD I+ P++
Sbjct: 421 GNRYPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPEL 480
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQXXXXXXXXXX------------- 323
V+KQLMR+H+R LL+VL+P+ERKIIR RFGI DGK
Sbjct: 481 SVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETR 540
Query: 324 ----LKQCLNSQGLEAYADML 374
LKQ LN GL+AY+D+L
Sbjct: 541 ALYKLKQNLNKHGLDAYSDLL 561
>gb|AFK38759.1| unknown [Lotus japonicus]
Length = 311
Score = 142 bits (357), Expect = 6e-32
Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P++E++A G+TV+++E L AR+PLSMQQ VW DQ TT+QEITADT I+TPDV
Sbjct: 170 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDV 229
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDG-----------------KQXXXXXX 311
V KQLMR+H RNLL LNPRER+IIR RFGI+DG +
Sbjct: 230 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 289
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQCL S GL+AYA++L+
Sbjct: 290 ALDKLKQCLASHGLDAYANLLV 311
>ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis thaliana]
gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
polymerase sigma factor sigF, chloroplastic; Short=Sigma
factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
sigma factor-like protein [Arabidopsis thaliana]
gi|16604647|gb|AAL24116.1| putative RNA polymerase
sigma-70 factor [Arabidopsis thaliana]
gi|20197948|gb|AAD31584.2| putative RNA polymerase
sigma-70 factor [Arabidopsis thaliana]
gi|20259557|gb|AAM14121.1| putative RNA polymerase
sigma-70 factor protein [Arabidopsis thaliana]
gi|330254238|gb|AEC09332.1| RNA polymerase sigma factor
sigF [Arabidopsis thaliana]
Length = 547
Score = 141 bits (356), Expect = 8e-32
Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN PS+E++A G++ E+++KL Y R PLSMQQP+W DQ TTFQEIT D+ I+TP +
Sbjct: 406 GNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTM 465
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMR HVRNLL+VL+P+ER+II+ RFGID GKQ
Sbjct: 466 SVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESR 525
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ +NS GL AYAD+L+
Sbjct: 526 ALYRLKQNMNSHGLHAYADLLV 547
>emb|CAB60192.1| putative sigma-like transcription factor [Arabidopsis thaliana]
Length = 487
Score = 141 bits (356), Expect = 8e-32
Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN PS+E++A G++ E+++KL Y R PLSMQQP+W DQ TTFQEIT D+ I+TP +
Sbjct: 346 GNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTM 405
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMR HVRNLL+VL+P+ER+II+ RFGID GKQ
Sbjct: 406 SVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESR 465
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ +NS GL AYAD+L+
Sbjct: 466 ALYRLKQNMNSHGLHAYADLLV 487
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 420 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 479
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 480 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 539
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 540 ALYRLKQSLGGKASYGYADLLI 561
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 428 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 487
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 488 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 547
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 548 ALYRLKQSLGGKASYGYADLLI 569
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 429 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 488
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 489 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 548
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 549 ALYRLKQSLGGKASYGYADLLI 570
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 420 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 479
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 480 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 539
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 540 ALYRLKQSLGGKASYGYADLLI 561
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 428 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 487
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 488 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 547
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 548 ALYRLKQSLGGKASYGYADLLI 569
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 141 bits (355), Expect = 1e-31
Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 17/142 (11%)
Frame = +3
Query: 3 GNRNPSREDIAACAGITVERMEKLFYTARVPLSMQQPVWMDQSTTFQEITADTTIDTPDV 182
GN +P +ED+A GITVE++E+L + R+PLSMQQPVW DQ TTFQEITADT ++ PD+
Sbjct: 417 GNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDI 476
Query: 183 GVTKQLMRQHVRNLLSVLNPRERKIIRSRFGIDDGKQ-----------------XXXXXX 311
V KQLMRQHVRNLL++LNP+ER I+R RFGI+DGK
Sbjct: 477 SVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESR 536
Query: 312 XXXXLKQCLNSQGLEAYADMLI 377
LKQ L + YAD+LI
Sbjct: 537 ALYRLKQSLGGKASYGYADLLI 558