BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00008504
         (1560 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     73   3e-10
ref|XP_006848683.1| hypothetical protein AMTR_s02463p00000880, p...    71   1e-09
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    64   2e-07

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +2

Query: 17  VLLNAIPETYGDVKSAIKYGRDKVALDVVMNALKHKEKDLNMLKNVYSGPDKVFHVNGKT 196
           VLLN++P +Y  + + I +G+D + L  V +AL   EK    ++       +VF    + 
Sbjct: 148 VLLNSLPSSYDTLSTTILHGKDSIQLKDVTSALLLNEK----MRKKPENHGQVFITESRG 203

Query: 197 NSYYQHNEHANGSGDKKSNDKGAFKPRYKPRRCYNCGEIGHYVRDCPNPKRNQKGEQA 370
            SY + + +   SG   +  K   + + K R CYNC + GH+ RDCPNPKR  KGE +
Sbjct: 204 RSYQRSSSNYGRSG---ARGKSKVRSKSKARNCYNCDQPGHFKRDCPNPKRG-KGESS 257


>ref|XP_006848683.1| hypothetical protein AMTR_s02463p00000880, partial [Amborella
           trichopoda] gi|548852081|gb|ERN10264.1| hypothetical
           protein AMTR_s02463p00000880, partial [Amborella
           trichopoda]
          Length = 222

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
 Frame = +2

Query: 17  VLLNAIPETYGDVKSAIKYGRDKVALDVVMNALKHKEKDLNMLKNVYSGPDKVFHVNGKT 196
           +LL ++P  Y ++K  IKYGRD + LD V+ ALK KE++++  K+  +  D+ +   G+ 
Sbjct: 16  ILLRSLPPAYQELKVVIKYGRDTLTLDDVLGALKSKEQEMSKEKD--NVKDEAYLARGRD 73

Query: 197 NSY---YQHNEHANGSGDKKSNDKGAFKPRYKPRRCYNCGEIGHYVRDCPNPKRNQKGEQ 367
           N+    +   +H  G    +S  K   K  +K R+CY CG++GH  R C   K   K ++
Sbjct: 74  NNRGRDHYRKDHFKGQHRSQSRSKSRGK-YHKDRKCYFCGKVGHIKRFCIEFKNKLKEDR 132


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 35/116 (30%), Positives = 61/116 (52%)
 Frame = +2

Query: 17  VLLNAIPETYGDVKSAIKYGRDKVALDVVMNALKHKEKDLNMLKNVYSGPDKVFHVNGKT 196
           +LLN++P +Y ++ + I +G+  + L  V +AL   EK    ++       +     G+ 
Sbjct: 147 LLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEK----MRKKPENQGQALITEGRG 202

Query: 197 NSYYQHNEHANGSGDKKSNDKGAFKPRYKPRRCYNCGEIGHYVRDCPNPKRNQKGE 364
            SY + + +   SG   +  K   + + + R CYNC + GH+ RDCPNP++  KGE
Sbjct: 203 RSYQRSSNNYGRSG---ARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKG-KGE 254