BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00007908
         (1529 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus...   788   0.0  
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 770   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               766   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   741   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]             739   0.0  
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       736   0.0  
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                  734   0.0  
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                  729   0.0  
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                729   0.0  
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]               728   0.0  
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                 728   0.0  
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                  728   0.0  
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]             724   0.0  
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr...   724   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   724   0.0  
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...   723   0.0  
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]              718   0.0  
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g...   714   0.0  
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   713   0.0  
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   712   0.0  

>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
          Length = 883

 Score =  788 bits (2036), Expect = 0.0
 Identities = 394/510 (77%), Positives = 430/510 (84%), Gaps = 2/510 (0%)
 Frame = +3

Query: 3    KPLWA-ECGQNGSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTK 179
            KPL A +  +NGSAS ERKPSTVL+KR  D V     S+ K+PKLS+ S+  K+K++S K
Sbjct: 208  KPLVARKPDKNGSASTERKPSTVLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVK 266

Query: 180  AEIKEEDDEDHVPISQRMKKTVLLEKK-SAVVKKMTKPTPAITKKFNKKPEKVLKNSKYS 356
             E+K EDDED VP+SQR KK+   EKK S  +K   K       K NKK ++V K++ YS
Sbjct: 267  PEVKAEDDEDLVPLSQRTKKSTTPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYS 326

Query: 357  ESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVML 536
            +SSK+PPSSG+GQKWTTLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AVML
Sbjct: 327  KSSKLPPSSGDGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVML 386

Query: 537  DTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXX 716
            +T+Y+ KP+FKENFM DW+KILGKNH+IQSLEHCDFTPIYEWH                 
Sbjct: 387  ETDYLKKPQFKENFMTDWKKILGKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKA 446

Query: 717  XXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 896
                       YMWAVLDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINI
Sbjct: 447  LKEEKLKLEEKYMWAVLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINI 506

Query: 897  GRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKY 1076
            GRDAPIPECPI GE WKEIRHDNTVTWLAYW+DPIN KEFKYVFLAASS+LKGQSDKEKY
Sbjct: 507  GRDAPIPECPIEGERWKEIRHDNTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKY 566

Query: 1077 EKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 1256
            EKARLLKDYIQGIR AYTRDF SKDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 567  EKARLLKDYIQGIRTAYTRDFVSKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 626

Query: 1257 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDT 1436
            TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE AVF+AIQQFR+GKKGGDD+FDKLDT
Sbjct: 627  TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDT 686

Query: 1437 SKLNAHLKELMPGLTAKVFRTYNASITLDD 1526
            SKLNAHLKELMPGLTAKVFRTYNASITLDD
Sbjct: 687  SKLNAHLKELMPGLTAKVFRTYNASITLDD 716


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  770 bits (1988), Expect = 0.0
 Identities = 379/513 (73%), Positives = 423/513 (82%), Gaps = 4/513 (0%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGERKP---STVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL  +   NGSA  + +P   S +  KR   D+K ++  S K+PKLS  +     K++S
Sbjct: 230  KPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQAS 289

Query: 174  TKAEIK-EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSK 350
             K E K E+DD+DH+PISQR+KK+   E KS+ +KK TK   +  KK NKK +KV+KNSK
Sbjct: 290  VKPEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSK 349

Query: 351  YSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAV 530
            YS+SSKVPPSSGEG+KW  L HNGVIFPPPYKPHG+K+LYKGKPV LTPEQEEVATMFAV
Sbjct: 350  YSKSSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAV 409

Query: 531  MLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXX 710
            MLDT+YM+KP+FKENF  DW+KILGKNH+IQ+LE+CDF+PIYEWH               
Sbjct: 410  MLDTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEK 469

Query: 711  XXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 890
                         YMWA +DG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITI
Sbjct: 470  KALKEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITI 529

Query: 891  NIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKE 1070
            NIG+DAPIPECP+PGE WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKE
Sbjct: 530  NIGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKE 589

Query: 1071 KYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 1250
            KYEKARLLKDYIQGIR AYT+DF SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 590  KYEKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 649

Query: 1251 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKL 1430
            CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE AVF+AIQQFR+GK+G  D+FD L
Sbjct: 650  CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLL 709

Query: 1431 DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 710  DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 742


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  766 bits (1979), Expect = 0.0
 Identities = 384/511 (75%), Positives = 425/511 (83%), Gaps = 2/511 (0%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESSTKA 182
            K L +   QNGS +   K S  + KR + +VK +  SS K+PKLS+ S    NK++S KA
Sbjct: 218  KTLVSNFQQNGSINRGSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKA 277

Query: 183  EIKEED-DEDHVPISQRMKKTVLLEKKSAVVK-KMTKPTPAITKKFNKKPEKVLKNSKYS 356
            E K +D D+DHVPISQRMKK+     KS+  K K+TK   +  KK +KK +KV+K SKYS
Sbjct: 278  EPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYS 337

Query: 357  ESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVML 536
            +SSKVPPSSGEG+KW TLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATMFAVML
Sbjct: 338  KSSKVPPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVML 397

Query: 537  DTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXX 716
            DT+YM K KFKENFMDDWRKILGKNH+IQ+LE CDFTPIYEWH                 
Sbjct: 398  DTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKV 457

Query: 717  XXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 896
                       YMWA+++GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDITINI
Sbjct: 458  LKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINI 517

Query: 897  GRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKY 1076
            G+DAPIPECPIPGESWKEIRHDNTVTWLA+WNDPI P+EFKYVFLAASSSLKGQSDKEKY
Sbjct: 518  GKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKY 577

Query: 1077 EKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 1256
            EKARLLKD+IQGIR AYT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 578  EKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 637

Query: 1257 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDT 1436
            TLKVENVEP PP+ILKFDFLGKDSIRYQNEVEVE+ V++AIQQFRTGK+GGDD+FDKLDT
Sbjct: 638  TLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDT 697

Query: 1437 SKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            SKLNAHLK LMPGLTAKVFRTYNASITLD+M
Sbjct: 698  SKLNAHLKGLMPGLTAKVFRTYNASITLDEM 728


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  741 bits (1913), Expect = 0.0
 Identities = 373/538 (69%), Positives = 420/538 (78%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+   NGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+K+LGKNH IQ+LE C
Sbjct: 403  KMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            IN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  INQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score =  739 bits (1908), Expect = 0.0
 Identities = 372/538 (69%), Positives = 419/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+   NGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+K+LGKNH IQ+LE C
Sbjct: 403  KMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            IN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  INQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AI QFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  736 bits (1901), Expect = 0.0
 Identities = 371/538 (68%), Positives = 418/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS +    K +++  KR   + K  + SS K+PKLS       NK+++
Sbjct: 222  KPLAAKVQQNGSASRDGPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAA 281

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K S  VKK
Sbjct: 282  VKPEPKAEDDDDNIPLSQRGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKK 341

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +    +  KK NK  +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGV
Sbjct: 342  ASTVVSSSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGV 401

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP FKENF  DW+KILGKNH+IQ+LE C
Sbjct: 402  KMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDC 461

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 462  DFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 521

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+ NTVTWLAYWNDP
Sbjct: 522  FRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDP 581

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            IN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 582  INQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 641

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+V
Sbjct: 642  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQV 701

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 702  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 759


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score =  734 bits (1895), Expect = 0.0
 Identities = 368/538 (68%), Positives = 419/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS +    K +++  KR   +VK  + SS K+PKLS T     NK+++
Sbjct: 223  KPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFA MLDT+YM+KP+FKENF  DW+KILGKNH IQ+LE C
Sbjct: 403  KMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            +N KE KYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQ+AV
Sbjct: 583  VNLKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score =  729 bits (1881), Expect = 0.0
 Identities = 366/538 (68%), Positives = 417/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+K+LGKNH IQ+LE C
Sbjct: 403  KMLYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEREKKKQMTTEEKKALKDERLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRI P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            +N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  VNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTL+VENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLRVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  729 bits (1881), Expect = 0.0
 Identities = 370/540 (68%), Positives = 417/540 (77%), Gaps = 31/540 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSE--TSILHKNKE 167
            KPL A+  QNGS S +    K +++  KR   +VK  + SS K+PKLS   TSI +K   
Sbjct: 222  KPLAAKVQQNGSVSRDGPMNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAA 281

Query: 168  SSTKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVV 272
               + E K EDD+D++P+SQR KK+                           + K SA V
Sbjct: 282  VKPEPEPKAEDDDDNIPLSQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPV 341

Query: 273  KKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPH 452
            KK +       KK NK  +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPY PH
Sbjct: 342  KKASTVVSPSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPH 401

Query: 453  GVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLE 632
            GVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+K+LGKNH IQ+LE
Sbjct: 402  GVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLE 461

Query: 633  HCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPP 812
             CDF PIYEWH                            YMWA++DGVKEKVGNFRVEPP
Sbjct: 462  DCDFGPIYEWHQQEKEKKKQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPP 521

Query: 813  GLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWN 992
            GLFRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLA+W 
Sbjct: 522  GLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWI 581

Query: 993  DPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQI 1169
            DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQI
Sbjct: 582  DPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQI 641

Query: 1170 AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV 1349
            AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV
Sbjct: 642  AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV 701

Query: 1350 EVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            +VE AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 702  QVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 761


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score =  728 bits (1880), Expect = 0.0
 Identities = 367/538 (68%), Positives = 418/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS E    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQQNGSASPEGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                         V + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV++ + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGV
Sbjct: 343  ASTVVSTSLKKVNKKSKKVIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+KILGKNH IQ+LE C
Sbjct: 403  KMLYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            +N KE KYVFLAASS+LKGQS KEKYEKAR+LKDYI GIR AYT+ FT +KDP KKQIAV
Sbjct: 583  VNIKECKYVFLAASSTLKGQSVKEKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score =  728 bits (1880), Expect = 0.0
 Identities = 367/538 (68%), Positives = 415/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+   NGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQPNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+K+LGKNH IQ+LE C
Sbjct: 403  KMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMW ++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMWVIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            IN KE KYVFL ASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  INQKERKYVFLGASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G  D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score =  728 bits (1880), Expect = 0.0
 Identities = 366/538 (68%), Positives = 416/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFA MLDT+YM+KP+FKENF  DW+KILGKNH IQ+LE C
Sbjct: 403  KMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEREKKKQMTTEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRI P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            +N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  VNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score =  724 bits (1869), Expect = 0.0
 Identities = 366/538 (68%), Positives = 415/538 (77%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL  +  QNGSAS +    K +++L KR   +VK  + SS K+ KLS       NK+++
Sbjct: 223  KPLATKVQQNGSASRDGPMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM KP+FKENF  DW+K+LGKNH +Q+LE C
Sbjct: 403  KMLYKXQPLTLTPEQEEVATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YMWA++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKRKQMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLA+WNDP
Sbjct: 523  FRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            IN KE KYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  INQKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G  D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGCADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|557555706|gb|ESR65720.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 824

 Score =  724 bits (1868), Expect = 0.0
 Identities = 362/513 (70%), Positives = 415/513 (80%), Gaps = 4/513 (0%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE--RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESST 176
            KPL ++  QNGS S E  +K S+V  KR +     + ASS+K+PK+S+TS   K K+ + 
Sbjct: 224  KPLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTV 283

Query: 177  KAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKY 353
            K E K+ DD+DH+PISQRMK +    KKS     K TK   + +KK NKK +KV+KNS+Y
Sbjct: 284  KVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQY 342

Query: 354  SESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAV 530
            S+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYKGK V LTPEQEEVATMFAV
Sbjct: 343  SKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAV 402

Query: 531  MLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXX 710
            MLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PIY+WH               
Sbjct: 403  MLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEK 462

Query: 711  XXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 890
                         YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITI
Sbjct: 463  KALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITI 522

Query: 891  NIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKE 1070
            NIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSD+E
Sbjct: 523  NIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDRE 582

Query: 1071 KYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 1250
            KYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 583  KYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVG 642

Query: 1251 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKL 1430
            CCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGKK  DD+FDKL
Sbjct: 643  CCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKL 702

Query: 1431 DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            DT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 703  DTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  724 bits (1868), Expect = 0.0
 Identities = 362/513 (70%), Positives = 415/513 (80%), Gaps = 4/513 (0%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE--RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESST 176
            KPL ++  QNGS S E  +K S+V  KR +     + ASS+K+PK+S+TS   K K+ + 
Sbjct: 224  KPLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTV 283

Query: 177  KAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKY 353
            K E K+ DD+DH+PISQRMK +    KKS     K TK   + +KK NKK +KV+KNS+Y
Sbjct: 284  KVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQY 342

Query: 354  SESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAV 530
            S+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYKGK V LTPEQEEVATMFAV
Sbjct: 343  SKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAV 402

Query: 531  MLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXX 710
            MLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PIY+WH               
Sbjct: 403  MLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEK 462

Query: 711  XXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 890
                         YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITI
Sbjct: 463  KALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITI 522

Query: 891  NIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKE 1070
            NIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSD+E
Sbjct: 523  NIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDRE 582

Query: 1071 KYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 1250
            KYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 583  KYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVG 642

Query: 1251 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKL 1430
            CCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGKK  DD+FDKL
Sbjct: 643  CCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKL 702

Query: 1431 DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            DT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 703  DTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score =  723 bits (1866), Expect = 0.0
 Identities = 362/513 (70%), Positives = 414/513 (80%), Gaps = 4/513 (0%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE--RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESST 176
            KPL ++  QNGS S E  +K S+V  KR +     + ASS+K+PK+S+TS   K K+ + 
Sbjct: 224  KPLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTV 283

Query: 177  KAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTPAITKKFNKKPEKVLKNSKY 353
            K E K+ DD+DH+PISQRMK +    KKS     K TK   + + K NKK +KV+KNS+Y
Sbjct: 284  KVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQY 342

Query: 354  SESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAV 530
            S+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYKGK V LTPEQEEVATMFAV
Sbjct: 343  SKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAV 402

Query: 531  MLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXX 710
            MLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PIY+WH               
Sbjct: 403  MLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEK 462

Query: 711  XXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 890
                         YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITI
Sbjct: 463  KALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITI 522

Query: 891  NIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKE 1070
            NIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKGQSDKE
Sbjct: 523  NIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 582

Query: 1071 KYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 1250
            KYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 583  KYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVG 642

Query: 1251 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKL 1430
            CCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V++AI QF+TGKK  DD+FDKL
Sbjct: 643  CCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKL 702

Query: 1431 DTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            DT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 703  DTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score =  718 bits (1854), Expect = 0.0
 Identities = 363/538 (67%), Positives = 414/538 (76%), Gaps = 29/538 (5%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGE---RKPSTVLKKRNVDDVKPTDASSSKRPKLSETSILHKNKESS 173
            KPL A+  QNGSAS +    K +++  KR   +VK  + SS K+PKLS       NK+++
Sbjct: 223  KPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAA 282

Query: 174  TKAEIKEEDDEDHVPISQRMKKT-------------------------VLLEKKSAVVKK 278
             K E K EDD+D++P+SQR KK+                           + K SA VKK
Sbjct: 283  VKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKK 342

Query: 279  MTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 458
             +       KK NKK +KV+K + Y++SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGV
Sbjct: 343  ASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGV 402

Query: 459  KILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHC 638
            K+LYK +P+ LTPEQEEVATMFAVMLDT+YM KP+FKENF  DW+K+LGKNH +Q+LE C
Sbjct: 403  KMLYKQQPLTLTPEQEEVATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDC 462

Query: 639  DFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGL 818
            DF PIYEWH                            YM A++DGVKEKVGNFRVEPPGL
Sbjct: 463  DFGPIYEWHQQEKEKRKQMTTEEKKALKEERLQQEEKYMRAIVDGVKEKVGNFRVEPPGL 522

Query: 819  FRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDP 998
            FRGRGEHPK+GKLKKRI P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP
Sbjct: 523  FRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDP 582

Query: 999  INPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAV 1175
            +N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAV
Sbjct: 583  VNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 642

Query: 1176 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 1355
            ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+V
Sbjct: 643  ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQV 702

Query: 1356 EVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            E AVF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 703  EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
            topoisomerase I [Nicotiana tabacum]
          Length = 852

 Score =  714 bits (1843), Expect = 0.0
 Identities = 364/504 (72%), Positives = 401/504 (79%), Gaps = 5/504 (0%)
 Frame = +3

Query: 27   QNGSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSIL-----HKNKESSTKAEIK 191
            QNG  S     +TVL KR      P D S   R +L     L      +  E+S K E K
Sbjct: 221  QNGLPS-----TTVLSKR-----PPGDVSLLLRLQLKSLGFLMHLHLFRVSEASVKPEKK 270

Query: 192  EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKV 371
             EDD+D VPISQR+KK+V    K +  KK TK   +     + K +K LK SKYS+SSK+
Sbjct: 271  TEDDDDDVPISQRIKKSVASASKLSSAKKATKVVSS-----SMKTKKKLKKSKYSKSSKL 325

Query: 372  PPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYM 551
             PSSGEGQKWTTLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AVMLDT+YM
Sbjct: 326  QPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTDYM 385

Query: 552  DKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXX 731
             K +FKENFM+DWRKILGKNH+IQ+L+ CDFTPIYE                        
Sbjct: 386  SKLQFKENFMNDWRKILGKNHVIQNLDDCDFTPIYERPSSEKEKKKQMSTKRKRPLREEK 445

Query: 732  XXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAP 911
                  YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITINIG+ AP
Sbjct: 446  LKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGAP 505

Query: 912  IPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARL 1091
            IPECPIPGE WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR 
Sbjct: 506  IPECPIPGERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARR 565

Query: 1092 LKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1271
            LKDYI+GIR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 566  LKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 625

Query: 1272 NVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNA 1451
            NVEPVPPNILKFDFLGKDSIRYQNEV V   VF+AIQ FR+GKKGGDD+FDKLDTSKLNA
Sbjct: 626  NVEPVPPNILKFDFLGKDSIRYQNEVAVYKPVFKAIQLFRSGKKGGDDLFDKLDTSKLNA 685

Query: 1452 HLKELMPGLTAKVFRTYNASITLD 1523
            HLKELMPGLTAKVFRTYNAS+TL+
Sbjct: 686  HLKELMPGLTAKVFRTYNASVTLE 709


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
            gi|296082698|emb|CBI21703.3| unnamed protein product
            [Vitis vinifera]
          Length = 857

 Score =  713 bits (1840), Expect = 0.0
 Identities = 366/518 (70%), Positives = 410/518 (79%), Gaps = 9/518 (1%)
 Frame = +3

Query: 3    KPLWAECGQNGSASGERKPSTVL-KKRNVDDVKPTDASSS--KRPKLSETSIL-HKNKES 170
            KPL  +  QNG      K  TVL KKR +D V  +   SS  K+PK+S  S    K   +
Sbjct: 175  KPLPLKVNQNGGTDKRDKSPTVLNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHA 234

Query: 171  STKAEIK-EEDDEDHVPISQRMKKTVLLEKKSAVV--KKMTKPTPAITKKFNK--KPEKV 335
            + KAE K E+DD+D +PISQRMKK+        V   +K+TK   + + K  K  K +K+
Sbjct: 235  TAKAEPKVEDDDDDDMPISQRMKKSGASSGNKPVPAKQKVTKVVSSTSFKKTKDIKSKKM 294

Query: 336  LKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVA 515
             KNSKYS+S+KVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVA
Sbjct: 295  EKNSKYSKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVA 354

Query: 516  TMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXX 695
            TMFAVMLDT+YM K KFKENFM DWRKILGKNH+IQ L+ CDFTPIYEWH          
Sbjct: 355  TMFAVMLDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQM 414

Query: 696  XXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP 875
                              YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P
Sbjct: 415  STEEKKTLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHP 474

Query: 876  SDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKG 1055
            SDITINIG+++ IPECPIPGESWKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSSLKG
Sbjct: 475  SDITINIGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG 534

Query: 1056 QSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDE 1235
            QSDKEKYEKAR LK+YI+ IR  YT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDE
Sbjct: 535  QSDKEKYEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDE 594

Query: 1236 ADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDD 1415
            ADTVGCCTLKVENV P PPN L+FDFLGKDSIRY+  VEVE+ V++AI+QFR GK G DD
Sbjct: 595  ADTVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDD 654

Query: 1416 MFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1529
            +FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD+M
Sbjct: 655  LFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEM 692


>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
            tuberosum]
          Length = 905

 Score =  712 bits (1837), Expect = 0.0
 Identities = 358/504 (71%), Positives = 394/504 (78%), Gaps = 5/504 (0%)
 Frame = +3

Query: 27   QNGSASGERKPSTVLKKRNVDDVKPTDASSSKRPKLSETSIL-HKN----KESSTKAEIK 191
            QNG  S     +TVL KR      P + S   R +L     L H +       S K E K
Sbjct: 244  QNGLPS-----ATVLSKR-----PPGEVSLLLRLQLKSLDFLMHLHLFLVSNXSVKTEKK 293

Query: 192  EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKV 371
             EDD+D VP+SQR+KK V     SA      K    +     KK +K LK  KYS+SSK+
Sbjct: 294  TEDDDDEVPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKLKKPKYSKSSKL 353

Query: 372  PPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYM 551
             PSSG+GQKWTTL HNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AVMLDTEY+
Sbjct: 354  QPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYL 413

Query: 552  DKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXX 731
             K +FKENFM+DWRKILGKNH+IQ LE C+FTPIYEWH                      
Sbjct: 414  TKQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEK 473

Query: 732  XXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAP 911
                  YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITINIG+  P
Sbjct: 474  LKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVP 533

Query: 912  IPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARL 1091
            +PECPIPG+ WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR 
Sbjct: 534  VPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARR 593

Query: 1092 LKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1271
            LKDYI+GIR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 594  LKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 653

Query: 1272 NVEPVPPNILKFDFLGKDSIRYQNEVEVEVAVFRAIQQFRTGKKGGDDMFDKLDTSKLNA 1451
            NVEPVPPNILKFDFLGKDSIRYQNEV V   VF+AIQQFR+GKKGGDD+FDKLDTSKLNA
Sbjct: 654  NVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNA 713

Query: 1452 HLKELMPGLTAKVFRTYNASITLD 1523
            HLKELMPGLTAKVFRTYNAS TL+
Sbjct: 714  HLKELMPGLTAKVFRTYNASFTLE 737