BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00005391
         (896 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus...   265   5e-91
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   236   6e-80
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   236   6e-80
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [...   232   1e-79
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   234   2e-79
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   234   2e-79
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              218   1e-76
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   218   1e-76
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu...   208   1e-73
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i...   214   5e-73
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6...   209   5e-73
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   209   1e-72
ref|XP_002532622.1| Far upstream element-binding protein, putati...   208   2e-72
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   205   9e-72
ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Popu...   187   1e-68
ref|XP_006379517.1| hypothetical protein POPTR_0008s03070g [Popu...   187   1e-68
ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prun...   209   2e-68
ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]...   193   1e-67
ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutr...   192   2e-67
ref|XP_006288155.1| hypothetical protein CARUB_v10001394mg [Caps...   195   5e-64

>gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus guttatus]
          Length = 314

 Score =  265 bits (678), Expect(2) = 5e-91
 Identities = 137/225 (60%), Positives = 160/225 (71%), Gaps = 3/225 (1%)
 Frame = +2

Query: 77  MEGDQPELDAPSSEVQQS---PPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQS 247
           MEG++    A S E Q +   PPP NEEK  HLR LLSN              N I+SQS
Sbjct: 1   MEGNKSAYSAASPEEQLNHSPPPPDNEEKTTHLRFLLSNAEAGSVIGKGGATINDIQSQS 60

Query: 248 GARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVR 427
           GARVQLSRN EYFPGT+DRIIMVSG +DD+LKA +LILS+LLDEFY EDG E DP+SK+R
Sbjct: 61  GARVQLSRNFEYFPGTSDRIIMVSGTIDDVLKAVNLILSKLLDEFYPEDGGETDPQSKIR 120

Query: 428 LVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAI 607
           LVVPNSSCGGIIGK G IIRSL+E+S A IKIS QD YYPGL DRLV ++G+L  QMRA+
Sbjct: 121 LVVPNSSCGGIIGKGGSIIRSLMEESSASIKISSQDTYYPGLHDRLVTVSGSLGEQMRAV 180

Query: 608 ELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
           EL++  L++D YY  S + PFPY  + YNGMNYG        Q N
Sbjct: 181 ELILLKLVEDQYYHQSAHAPFPYPVVAYNGMNYGPNAPGPKYQNN 225



 Score = 97.1 bits (240), Expect(2) = 5e-91
 Identities = 46/54 (85%), Positives = 52/54 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAIH 894
           ADEHIG+VVGRGGRN+ME+SQ SGARIKIS+RGDFMSGTSDRKVTITGS+ +IH
Sbjct: 244 ADEHIGIVVGRGGRNIMELSQLSGARIKISERGDFMSGTSDRKVTITGSQRSIH 297


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  236 bits (601), Expect(2) = 6e-80
 Identities = 127/224 (56%), Positives = 152/224 (67%), Gaps = 11/224 (4%)
 Frame = +2

Query: 71  MSMEG-------DQPELDAPSSEVQQSPPP----GNEEKGIHLRLLLSNXXXXXXXXXXX 217
           M+MEG          E     S  ++SPPP     +EEK  +++ LLSN           
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPPPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 218 XXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDG 397
               + +S+SGAR+QLSRN E FPGT DRI+MVSG +DDILKA DLIL +L+DEFYAEDG
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 398 AEIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIIT 577
            E+DP SK RLVVPNSSCGGIIGK G  I+S IEDS A IKISPQD  +PGL DR+V +T
Sbjct: 121 GEVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 578 GTLAVQMRAIELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
           GTL  QMRAIEL++  L +DP+Y  S N PF YAA +Y GMNYG
Sbjct: 181 GTLEEQMRAIELILFKLAEDPHYMQSMNAPFQYAA-VYVGMNYG 223



 Score = 89.7 bits (221), Expect(2) = 6e-80
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEH+GLV+GR GR+++EISQ SGARIKISDRGDF+SGTSDRKVTITGS+ AI
Sbjct: 258 ADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRKVTITGSQRAI 310


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  236 bits (601), Expect(2) = 6e-80
 Identities = 127/224 (56%), Positives = 151/224 (67%), Gaps = 11/224 (4%)
 Frame = +2

Query: 71  MSMEG-------DQPELDAPSSEVQQSPPP----GNEEKGIHLRLLLSNXXXXXXXXXXX 217
           M+MEG          E     S  ++SPPP     +EEK  +++ LLSN           
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 218 XXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDG 397
               + +S+SGAR+QLSRN E FPGT DRI+MVSG +DDILKA DLIL +L+DEFYAEDG
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 398 AEIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIIT 577
            ++DP SK RLVVPNSSCGGIIGK G  I+S IEDS A IKISPQD  +PGL DR+V +T
Sbjct: 121 GDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 578 GTLAVQMRAIELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
           GTL  QMRAIEL++  L  DPYY  S N PF YAA +Y GMNYG
Sbjct: 181 GTLEEQMRAIELILFKLADDPYYMQSMNAPFQYAA-VYVGMNYG 223



 Score = 89.7 bits (221), Expect(2) = 6e-80
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEH+GLV+GR GR+++EISQ SGARIKISDRGDF+SGTSDRKVTITGS+ AI
Sbjct: 258 ADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRKVTITGSQRAI 310


>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
          Length = 328

 Score =  232 bits (591), Expect(2) = 1e-79
 Identities = 121/220 (55%), Positives = 152/220 (69%), Gaps = 2/220 (0%)
 Frame = +2

Query: 56  QPQLSMSMEGDQPELDAPSSEVQQSPPPG--NEEKGIHLRLLLSNXXXXXXXXXXXXXXN 229
           Q + + S EG Q    +P     QSPPP   ++E  I ++ LLSN              +
Sbjct: 8   QSEYNSSTEGVQEHSSSPRKS--QSPPPSTDHDENKISIKFLLSNAEAGSIIGKGGSTIS 65

Query: 230 QIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEID 409
             +++SGAR+QLSRNNE+FPGT DRI+MVSG +DD+LKA DL+L++LLDE Y EDG ++ 
Sbjct: 66  DFQARSGARIQLSRNNEFFPGTMDRIVMVSGPIDDVLKAVDLVLNKLLDESYVEDGGDVG 125

Query: 410 PESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLA 589
           P SKVRLVVPNSSCGGIIGK G +I+S IEDS A IKI PQD  +PGL DR+VI+ GTL 
Sbjct: 126 PRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLG 185

Query: 590 VQMRAIELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
            QMRAIEL++  L +D +Y  + N PFPYAA  Y GMNYG
Sbjct: 186 EQMRAIELILYKLAEDAHYVQNMNAPFPYAA-AYLGMNYG 224



 Score = 92.4 bits (228), Expect(2) = 1e-79
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLV+GR GR++MEISQ SGARIKISDRGDFMSGTSDRKVTITGS+ AI
Sbjct: 259 ADEHIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAI 311


>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
           tuberosum]
          Length = 327

 Score =  234 bits (597), Expect(2) = 2e-79
 Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 2/220 (0%)
 Frame = +2

Query: 56  QPQLSMSMEGDQPELDAPSSEVQQSPPPGN--EEKGIHLRLLLSNXXXXXXXXXXXXXXN 229
           Q + + S EG Q    +P     QSPPP +  EE  I ++ LLSN              +
Sbjct: 8   QSEYNSSTEGIQEHSSSPRKS--QSPPPSSDHEENKISIKFLLSNAEAGSIIGKGGSTIS 65

Query: 230 QIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEID 409
             +++SGAR+QLSRNNE+FPGT DRI+MVSG++DD+LKA DLIL++LLDE Y EDG ++ 
Sbjct: 66  DFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVEDGGDVG 125

Query: 410 PESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLA 589
           P SKVRLVVPNSSCGGIIGK G +I+S IEDS A IKI PQD  +PGL DR+VI+ GTL 
Sbjct: 126 PRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLG 185

Query: 590 VQMRAIELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
            QMRAIEL++  L +D +Y  + N PFPYAA  Y GMNYG
Sbjct: 186 EQMRAIELILYKLAEDTHYVQNMNAPFPYAA-AYLGMNYG 224



 Score = 89.4 bits (220), Expect(2) = 2e-79
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADE IGLV+GR GR++MEISQ SGARIKISDRGDFMSGTSDRKVTITGS+ AI
Sbjct: 258 ADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAI 310


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
           tuberosum]
          Length = 326

 Score =  234 bits (597), Expect(2) = 2e-79
 Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 2/220 (0%)
 Frame = +2

Query: 56  QPQLSMSMEGDQPELDAPSSEVQQSPPPGN--EEKGIHLRLLLSNXXXXXXXXXXXXXXN 229
           Q + + S EG Q    +P     QSPPP +  EE  I ++ LLSN              +
Sbjct: 8   QSEYNSSTEGIQEHSSSPRKS--QSPPPSSDHEENKISIKFLLSNAEAGSIIGKGGSTIS 65

Query: 230 QIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEID 409
             +++SGAR+QLSRNNE+FPGT DRI+MVSG++DD+LKA DLIL++LLDE Y EDG ++ 
Sbjct: 66  DFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVEDGGDVG 125

Query: 410 PESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLA 589
           P SKVRLVVPNSSCGGIIGK G +I+S IEDS A IKI PQD  +PGL DR+VI+ GTL 
Sbjct: 126 PRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLG 185

Query: 590 VQMRAIELVIQILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
            QMRAIEL++  L +D +Y  + N PFPYAA  Y GMNYG
Sbjct: 186 EQMRAIELILYKLAEDTHYVQNMNAPFPYAA--YLGMNYG 223



 Score = 89.4 bits (220), Expect(2) = 2e-79
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADE IGLV+GR GR++MEISQ SGARIKISDRGDFMSGTSDRKVTITGS+ AI
Sbjct: 257 ADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAI 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  218 bits (556), Expect(2) = 1e-76
 Identities = 116/217 (53%), Positives = 143/217 (65%)
 Frame = +2

Query: 92  PELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSR 271
           PE+    S   +SP     EK  ++R L+SN              N  +SQSGAR+QLSR
Sbjct: 60  PEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 119

Query: 272 NNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNSSC 451
           N+E+FPGT+DRIIM+SGA ++I+KA +LIL++LL E + EDG E DP SKVRL+VPNSSC
Sbjct: 120 NHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSC 179

Query: 452 GGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILM 631
           GGIIGK G  I+S IEDS A IKISPQD  Y GL DRLV + G+L  QMRAI+L++  L 
Sbjct: 180 GGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLT 239

Query: 632 KDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
           +DP+Y    N PF YAA  YN MNYG        Q N
Sbjct: 240 EDPHYTQFMNAPFSYAA-AYNSMNYGPNGAGGKFQNN 275



 Score = 96.3 bits (238), Expect(2) = 1e-76
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLVVGRGGRN+M+ISQ SGARIKISDRGDFMSGT+DRKVTITGS+ AI
Sbjct: 288 ADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 340



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
 Frame = +2

Query: 164 LRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILK 343
           +RL++ N                    S A +++S  +  + G TDR++ + G++++ ++
Sbjct: 170 VRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMR 229

Query: 344 AADLILSRLLDE--------------------FYAEDGA-------EIDPESKVRLVVPN 442
           A DLILS+L ++                     Y  +GA       + D  + V + V +
Sbjct: 230 AIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGVAD 289

Query: 443 SSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
              G ++G+ G  I  + + SGA IKIS +  +  G  DR V ITG+      A  +++Q
Sbjct: 290 EHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQ 349


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  218 bits (556), Expect(2) = 1e-76
 Identities = 116/217 (53%), Positives = 143/217 (65%)
 Frame = +2

Query: 92  PELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSR 271
           PE+    S   +SP     EK  ++R L+SN              N  +SQSGAR+QLSR
Sbjct: 12  PEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSR 71

Query: 272 NNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNSSC 451
           N+E+FPGT+DRIIM+SGA ++I+KA +LIL++LL E + EDG E DP SKVRL+VPNSSC
Sbjct: 72  NHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSC 131

Query: 452 GGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILM 631
           GGIIGK G  I+S IEDS A IKISPQD  Y GL DRLV + G+L  QMRAI+L++  L 
Sbjct: 132 GGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLT 191

Query: 632 KDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
           +DP+Y    N PF YAA  YN MNYG        Q N
Sbjct: 192 EDPHYTQFMNAPFSYAA-AYNSMNYGPNGAGGKFQNN 227



 Score = 96.3 bits (238), Expect(2) = 1e-76
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLVVGRGGRN+M+ISQ SGARIKISDRGDFMSGT+DRKVTITGS+ AI
Sbjct: 240 ADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 292



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
 Frame = +2

Query: 164 LRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILK 343
           +RL++ N                    S A +++S  +  + G TDR++ + G++++ ++
Sbjct: 122 VRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMR 181

Query: 344 AADLILSRLLDE--------------------FYAEDGA-------EIDPESKVRLVVPN 442
           A DLILS+L ++                     Y  +GA       + D  + V + V +
Sbjct: 182 AIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGVAD 241

Query: 443 SSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
              G ++G+ G  I  + + SGA IKIS +  +  G  DR V ITG+      A  +++Q
Sbjct: 242 EHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQ 301


>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|550330463|gb|ERP56589.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 313

 Score =  208 bits (529), Expect(2) = 1e-73
 Identities = 112/219 (51%), Positives = 142/219 (64%)
 Frame = +2

Query: 86  DQPELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQL 265
           +QP+  +P      SPP  +EEK  + R L+SN                 +SQSGAR+QL
Sbjct: 13  EQPQKRSPPPPA--SPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQL 70

Query: 266 SRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNS 445
           SRN E+FPGT+DRIIMVSG +DD+LKA +LI+++LL E  AEDG E +P  +VRLVVPNS
Sbjct: 71  SRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNS 130

Query: 446 SCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQI 625
           +CG IIGK G II+S IE+S A IKISP D  + GL DRLV +TGTL  QM AI+L++  
Sbjct: 131 ACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSK 190

Query: 626 LMKDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
           L  DP+Y  + + PF YAA  YN MN+G        Q N
Sbjct: 191 LTDDPHYSQTMHAPFSYAA-AYNSMNHGPNGAAVKFQHN 228



 Score = 96.3 bits (238), Expect(2) = 1e-73
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLVVGRGGRN+MEISQ SGAR+KISDRGDFMSGT+DRK+TITGS+ AI
Sbjct: 241 ADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAI 293



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
 Frame = +2

Query: 149 EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAV 328
           E  + +RL++ N                   +S A +++S  +  F G TDR++ V+G +
Sbjct: 118 EPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTL 177

Query: 329 DDILKAADLILSRLLDE--------------------FYAEDGAEI-------DPESKVR 427
           ++ + A DLILS+L D+                     +  +GA +       D  + V 
Sbjct: 178 EEQMHAIDLILSKLTDDPHYSQTMHAPFSYAAAYNSMNHGPNGAAVKFQHNKDDITNSVT 237

Query: 428 LVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAI 607
           + V +   G ++G+ G  I  + + SGA +KIS +  +  G  DR + ITG+      A 
Sbjct: 238 IGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAE 297

Query: 608 ELVIQ 622
           ++++Q
Sbjct: 298 DMIMQ 302


>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
           arietinum]
          Length = 315

 Score =  214 bits (544), Expect(2) = 5e-73
 Identities = 110/208 (52%), Positives = 144/208 (69%), Gaps = 6/208 (2%)
 Frame = +2

Query: 101 DAPSSEVQQSPPPGNE------EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQ 262
           + P  +   SPPP +       EK  ++R L+SN                 +SQSGAR+Q
Sbjct: 13  EGPRKQRATSPPPKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQ 72

Query: 263 LSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPN 442
           LSRNNE+FPGTTDRIIMVSGA+++IL+A +LILS+LL E ++ED  +++P++KVRL+VPN
Sbjct: 73  LSRNNEFFPGTTDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDVEPKTKVRLIVPN 132

Query: 443 SSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
            SCGGIIGK G  IRS IEDS A IKISPQD  Y G  DR+V +TGTL  QMRA++L++ 
Sbjct: 133 GSCGGIIGKGGATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVS 192

Query: 623 ILMKDPYYQHSPNTPFPYAALMYNGMNY 706
            L +DP+Y  S N+PF Y+A  YN +NY
Sbjct: 193 KLAEDPHYSQSMNSPFSYSA--YNSVNY 218



 Score = 88.6 bits (218), Expect(2) = 5e-73
 Identities = 42/53 (79%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLVVGRGGRN+ +I+Q SGA+IKISDRGD++SGT+DRKVTITGS+ AI
Sbjct: 243 ADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQRAI 295



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
 Frame = +2

Query: 239 SQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDE------------- 379
           SQ+G ++    N+ Y  G  DRI+ V+G +D+ ++A DLI+S+L ++             
Sbjct: 153 SQAGIKISPQDNSYY--GQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQSMNSPFSY 210

Query: 380 ------FYAEDGA-------EIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADIK 520
                  Y  +GA       + +  + + + + +   G ++G+ G  I  + + SGA IK
Sbjct: 211 SAYNSVNYRPNGAAGKFQNSKEERSNSMTIGIADEHIGLVVGRGGRNIADITQVSGAKIK 270

Query: 521 ISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILMKDPYY 646
           IS +  Y  G  DR V ITG+     RAI     ++M+   Y
Sbjct: 271 ISDRGDYISGTTDRKVTITGS----QRAIRTAESMIMQKVAY 308


>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
           gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
           form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  209 bits (532), Expect(2) = 5e-73
 Identities = 105/209 (50%), Positives = 144/209 (68%), Gaps = 6/209 (2%)
 Frame = +2

Query: 98  LDAPSSEVQQSPPPGNE------EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARV 259
           + +P +  ++SPPP         EK  ++R L+SN               + +S+SGAR+
Sbjct: 9   VSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARI 68

Query: 260 QLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVP 439
           QLSRN+E+FPGT+DRIIM+SG +D++LKA +LIL++LL+E   ED  +++P +KVRL+VP
Sbjct: 69  QLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVP 128

Query: 440 NSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVI 619
           NSSCG IIGK G  I+S IEDS A IKISPQD  + GL DRLV +TGTL  QMRAI+L++
Sbjct: 129 NSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLIL 188

Query: 620 QILMKDPYYQHSPNTPFPYAALMYNGMNY 706
             L +DP+Y  + + PF YAA  YN M+Y
Sbjct: 189 SKLSEDPHYLQAMHAPFSYAAATYNSMSY 217



 Score = 93.2 bits (230), Expect(2) = 5e-73
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           AD HIGLV+GRGGRN+MEISQ SGARIKISDRGDFMSGT+DRKVTITGS+ AI
Sbjct: 242 ADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 294



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 28/156 (17%)
 Frame = +2

Query: 239 SQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDE------------- 379
           SQ+G ++    NN Y  G  DR++ ++G +D+ ++A DLILS+L ++             
Sbjct: 150 SQAGIKISPQDNNFY--GLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSY 207

Query: 380 --------FYAEDGA-------EIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGAD 514
                    Y  +GA       + D  + V + V +   G ++G+ G  I  + + SGA 
Sbjct: 208 AAATYNSMSYPSNGAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGAR 267

Query: 515 IKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
           IKIS +  +  G  DR V ITG+     +A  +++Q
Sbjct: 268 IKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQ 303


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
           gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
           protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  209 bits (531), Expect(2) = 1e-72
 Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 6/210 (2%)
 Frame = +2

Query: 98  LDAPSSEVQQSPPP------GNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARV 259
           + +P +  ++SPPP       N EK  ++R L+SN              N  +SQSGAR+
Sbjct: 9   VSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARI 68

Query: 260 QLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVP 439
           QLSRN+E+FPGTTDRIIMVSG++++ILKA +L+L++LL E +AE+G +++P +KVRL+VP
Sbjct: 69  QLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVP 128

Query: 440 NSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVI 619
           +SSCG IIGK G  I+S IEDS A IKISPQD  Y    DRLV ++GT+  QMRA +L++
Sbjct: 129 HSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIV 188

Query: 620 QILMKDPYYQHSPNTPFPYAALMYNGMNYG 709
             L +DP+Y  S N PF Y    +N MNYG
Sbjct: 189 SKLSEDPHYTQSMNYPFSYPT-SFNAMNYG 217



 Score = 92.4 bits (228), Expect(2) = 1e-72
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           +D HIGLVVGRGGRN++EISQ SGARIKISDRGDFMSGT+DRKVTITGS+ AI
Sbjct: 253 SDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 305


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score =  208 bits (530), Expect(2) = 2e-72
 Identities = 107/206 (51%), Positives = 139/206 (67%)
 Frame = +2

Query: 125 QSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDR 304
           +SP   + EK  ++R L+SN                 +SQSGAR+QLSRN E+FPGT+DR
Sbjct: 25  KSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDR 84

Query: 305 IIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNSSCGGIIGKAGVII 484
           II++SG +DD+LK  +L+L++LL E + EDG ++DP +KVRLVVPNSSCG IIGK G II
Sbjct: 85  IILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSII 144

Query: 485 RSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILMKDPYYQHSPNT 664
           +S IE+S A IKISPQD  + GL DRLV +TGTL  QMRAI+L++  L  DP+Y  + + 
Sbjct: 145 KSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTMHA 204

Query: 665 PFPYAALMYNGMNYGXXXXXXXXQMN 742
           PF Y A+ YN MNYG        Q N
Sbjct: 205 PFSY-AVAYNSMNYGANGAGGKFQNN 229



 Score = 92.0 bits (227), Expect(2) = 2e-72
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           AD HIGLVVGRGGRN+MEISQ SGARIKISDRGDFMSGT+DRK+ ITGS+ AI
Sbjct: 242 ADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAI 294



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
 Frame = +2

Query: 236 KSQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDE------------ 379
           +SQ+G ++    NN Y  G  DR++ V+G +++ ++A DLILS+L D+            
Sbjct: 150 ESQAGIKISPQDNNFY--GLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFS 207

Query: 380 --------FYAEDGA-------EIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGAD 514
                    Y  +GA       + D  + V + V ++  G ++G+ G  I  + + SGA 
Sbjct: 208 YAVAYNSMNYGANGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGAR 267

Query: 515 IKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILMKDPYY 646
           IKIS +  +  G  DR +IITG+     RAI     ++M+   Y
Sbjct: 268 IKISDRGDFMSGTNDRKIIITGS----QRAIRTAEGMIMQKVAY 307


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
           gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  205 bits (521), Expect(2) = 9e-72
 Identities = 105/209 (50%), Positives = 144/209 (68%), Gaps = 6/209 (2%)
 Frame = +2

Query: 98  LDAPSSEVQQSPPPGNE------EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARV 259
           + +P +  ++SPPP         EK  ++R L+SN               + +S+SGAR+
Sbjct: 9   VSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARI 68

Query: 260 QLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVP 439
           QLSRN+E+FPGT+DRIIM+SG +D++LKA +LIL++LL+E   ED  +++P +KVRL+VP
Sbjct: 69  QLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVP 128

Query: 440 NSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVI 619
           NSSCG IIGK G  I+S IEDS A IKISPQD  + GL DRLV +TGTL  QMRAI+L++
Sbjct: 129 NSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLIL 188

Query: 620 QILMKDPYYQHSPNTPFPYAALMYNGMNY 706
             L +DP+Y  + + PF YAA  YN M+Y
Sbjct: 189 SKLSEDPHYLQAMHAPFSYAA-TYNSMSY 216



 Score = 93.2 bits (230), Expect(2) = 9e-72
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           AD HIGLV+GRGGRN+MEISQ SGARIKISDRGDFMSGT+DRKVTITGS+ AI
Sbjct: 241 ADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 293



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
 Frame = +2

Query: 239 SQSGARVQLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDE------------- 379
           SQ+G ++    NN Y  G  DR++ ++G +D+ ++A DLILS+L ++             
Sbjct: 150 SQAGIKISPQDNNFY--GLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSY 207

Query: 380 -------FYAEDGA-------EIDPESKVRLVVPNSSCGGIIGKAGVIIRSLIEDSGADI 517
                   Y  +GA       + D  + V + V +   G ++G+ G  I  + + SGA I
Sbjct: 208 AATYNSMSYPSNGAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARI 267

Query: 518 KISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
           KIS +  +  G  DR V ITG+     +A  +++Q
Sbjct: 268 KISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQ 302


>ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Populus trichocarpa]
           gi|118486946|gb|ABK95306.1| unknown [Populus
           trichocarpa] gi|550332310|gb|ERP57313.1| hypothetical
           protein POPTR_0008s03070g [Populus trichocarpa]
          Length = 313

 Score =  187 bits (475), Expect(2) = 1e-68
 Identities = 102/221 (46%), Positives = 137/221 (61%), Gaps = 6/221 (2%)
 Frame = +2

Query: 98  LDAPSSEVQQSPPPGNE------EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARV 259
           + +P    ++SPPP         EK  +++LL+SN                 +SQSGAR+
Sbjct: 9   VSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITDFQSQSGARI 68

Query: 260 QLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVP 439
           QLS+N E+FPGT+DRII++SG +DD LKA +LI+++LL E   EDG + +P  +VRLVVP
Sbjct: 69  QLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVP 128

Query: 440 NSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVI 619
           N++CG IIGK G II+S IE+S A IKISP D  + GL DRLV ITGTL  QM AI+L++
Sbjct: 129 NNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEEQMHAIDLIL 188

Query: 620 QILMKDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
             L  D +Y  + + P  YAA  YN  N+G        Q N
Sbjct: 189 SKLTDDTHYLQNMHAPLSYAA-AYNSTNHGLNGAGVKFQHN 228



 Score =  100 bits (249), Expect(2) = 1e-68
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAIH 894
           ADEHIGLVVGRGGRN+MEISQ SGARIKISDRGDFMSGT+DRK+TITGS+ AIH
Sbjct: 241 ADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIH 294



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
 Frame = +2

Query: 149 EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAV 328
           E  + +RL++ N                   +S A +++S  +  F G TDR++ ++G +
Sbjct: 118 EPRMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTL 177

Query: 329 DDILKAADLILSRLLDEFY--------------------AEDGAEI-------DPESKVR 427
           ++ + A DLILS+L D+ +                      +GA +       D  + V 
Sbjct: 178 EEQMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGLNGAGVKFQHNKEDRTNSVT 237

Query: 428 LVVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAI 607
           + V +   G ++G+ G  I  + ++SGA IKIS +  +  G  DR + ITG+     RAI
Sbjct: 238 IGVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGS----QRAI 293

Query: 608 ELVIQILMKDPYYQHSPNT 664
                ++M+   Y     T
Sbjct: 294 HAAEDMIMQKVSYASERET 312


>ref|XP_006379517.1| hypothetical protein POPTR_0008s03070g [Populus trichocarpa]
           gi|550332311|gb|ERP57314.1| hypothetical protein
           POPTR_0008s03070g [Populus trichocarpa]
          Length = 312

 Score =  187 bits (475), Expect(2) = 1e-68
 Identities = 102/221 (46%), Positives = 137/221 (61%), Gaps = 6/221 (2%)
 Frame = +2

Query: 98  LDAPSSEVQQSPPPGNE------EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARV 259
           + +P    ++SPPP         EK  +++LL+SN                 +SQSGAR+
Sbjct: 9   VSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITDFQSQSGARI 68

Query: 260 QLSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVP 439
           QLS+N E+FPGT+DRII++SG +DD LKA +LI+++LL E   EDG + +P  +VRLVVP
Sbjct: 69  QLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVP 128

Query: 440 NSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVI 619
           N++CG IIGK G II+S IE+S A IKISP D  + GL DRLV ITGTL  QM AI+L++
Sbjct: 129 NNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEEQMHAIDLIL 188

Query: 620 QILMKDPYYQHSPNTPFPYAALMYNGMNYGXXXXXXXXQMN 742
             L  D +Y  + + P  YAA  YN  N+G        Q N
Sbjct: 189 SKLTDDTHYLQNMHAPLSYAA--YNSTNHGLNGAGVKFQHN 227



 Score =  100 bits (249), Expect(2) = 1e-68
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAIH 894
           ADEHIGLVVGRGGRN+MEISQ SGARIKISDRGDFMSGT+DRK+TITGS+ AIH
Sbjct: 240 ADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIH 293



 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
 Frame = +2

Query: 149 EKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFPGTTDRIIMVSGAV 328
           E  + +RL++ N                   +S A +++S  +  F G TDR++ ++G +
Sbjct: 118 EPRMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTL 177

Query: 329 DDILKAADLILSRLLDEFY-------------------AEDGAEI-------DPESKVRL 430
           ++ + A DLILS+L D+ +                     +GA +       D  + V +
Sbjct: 178 EEQMHAIDLILSKLTDDTHYLQNMHAPLSYAAYNSTNHGLNGAGVKFQHNKEDRTNSVTI 237

Query: 431 VVPNSSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIE 610
            V +   G ++G+ G  I  + ++SGA IKIS +  +  G  DR + ITG+     RAI 
Sbjct: 238 GVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGS----QRAIH 293

Query: 611 LVIQILMKDPYYQHSPNT 664
               ++M+   Y     T
Sbjct: 294 AAEDMIMQKVSYASERET 311


>ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
           gi|462415189|gb|EMJ19926.1| hypothetical protein
           PRUPE_ppa009068mg [Prunus persica]
          Length = 286

 Score =  209 bits (533), Expect(2) = 2e-68
 Identities = 108/200 (54%), Positives = 139/200 (69%)
 Frame = +2

Query: 110 SSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRNNEYFP 289
           SS   +SP     EK  ++R L+SN                 +SQSGAR+QLSRN+E+FP
Sbjct: 19  SSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNHEFFP 78

Query: 290 GTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNSSCGGIIGK 469
           GTTDRIIMVSG++++ILKA DL+L++LL E Y+E+  +++P +K+RLVVPNSSCGGIIGK
Sbjct: 79  GTTDRIIMVSGSINEILKAVDLVLAKLLSELYSEETDDVEPRTKLRLVVPNSSCGGIIGK 138

Query: 470 AGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILMKDPYYQ 649
            G  I+S IE S A IKISPQD  Y GL DRLV +TG L  QMRA++L++  L +DP+Y 
Sbjct: 139 GGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNLDEQMRAVDLIVSKLSEDPHYT 198

Query: 650 HSPNTPFPYAALMYNGMNYG 709
            S N PF Y A  YN M+YG
Sbjct: 199 QSMNAPFSYPA-AYNAMSYG 217



 Score = 77.4 bits (189), Expect(2) = 2e-68
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDR 858
           AD HIGLVVGRGGR +MEISQ SGARIKISDRGDFMSGT+DR
Sbjct: 242 ADSHIGLVVGRGGRTIMEISQASGARIKISDRGDFMSGTTDR 283


>ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]
           gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
           [Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|21554568|gb|AAM63617.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
           At5g04430/T32M21_30 [Arabidopsis thaliana]
           gi|332003361|gb|AED90744.1| TOMV RNA binding protein
           [Arabidopsis thaliana]
          Length = 313

 Score =  193 bits (491), Expect(2) = 1e-67
 Identities = 99/208 (47%), Positives = 136/208 (65%)
 Frame = +2

Query: 83  GDQPELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQ 262
           G   EL   S E   S    + EK  H+R L+SN               + +++SGAR+Q
Sbjct: 10  GSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQ 69

Query: 263 LSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPN 442
           LSRN E+FPGTTDRIIM+SG++ +++   +LIL +L  E +AEDG E++P  ++RLVVPN
Sbjct: 70  LSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPN 129

Query: 443 SSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
           SSCGGIIGK G  I+S IE+S A IKISP D  + GL DRLV ++GT   QMRAI+L++ 
Sbjct: 130 SSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILA 189

Query: 623 ILMKDPYYQHSPNTPFPYAALMYNGMNY 706
            L +D +Y  + ++P+ YAA  YN +NY
Sbjct: 190 KLTEDDHYSQNVHSPYSYAA-GYNSVNY 216



 Score = 90.9 bits (224), Expect(2) = 1e-67
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           ADEHIGLV+GRGGRN+MEI+Q +GARIKISDRGDFMSGT+DRKV+ITG + AI
Sbjct: 241 ADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAI 293


>ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
           gi|567170303|ref|XP_006398903.1| hypothetical protein
           EUTSA_v10014068mg [Eutrema salsugineum]
           gi|557099991|gb|ESQ40354.1| hypothetical protein
           EUTSA_v10014068mg [Eutrema salsugineum]
           gi|557099993|gb|ESQ40356.1| hypothetical protein
           EUTSA_v10014068mg [Eutrema salsugineum]
          Length = 313

 Score =  192 bits (488), Expect(2) = 2e-67
 Identities = 98/204 (48%), Positives = 134/204 (65%)
 Frame = +2

Query: 95  ELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQLSRN 274
           EL   S E   S    + EK  H+R L+SN               + +++SGAR+QLSRN
Sbjct: 14  ELTKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRN 73

Query: 275 NEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPNSSCG 454
            E+FPGTTDRIIM+SG++ +++   +LIL +L  E +AEDG +++P  ++RLVVPNSSCG
Sbjct: 74  QEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCG 133

Query: 455 GIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQILMK 634
           GIIGK G  I+S IE+S A IKISP D  Y GL DRLV ++GT   QMRAI+L++  L  
Sbjct: 134 GIIGKGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTS 193

Query: 635 DPYYQHSPNTPFPYAALMYNGMNY 706
           D +Y  + ++P+ YAA  YN +NY
Sbjct: 194 DDHYSQNVHSPYSYAA-GYNSVNY 216



 Score = 91.7 bits (226), Expect(2) = 2e-67
 Identities = 43/53 (81%), Positives = 51/53 (96%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDRKVTITGSEGAI 891
           +DEHIGLV+GRGGRN+MEI+Q +GARIKISDRGDFMSGT+DRKV+ITGS+ AI
Sbjct: 241 SDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAI 293


>ref|XP_006288155.1| hypothetical protein CARUB_v10001394mg [Capsella rubella]
           gi|482556861|gb|EOA21053.1| hypothetical protein
           CARUB_v10001394mg [Capsella rubella]
          Length = 282

 Score =  195 bits (496), Expect(2) = 5e-64
 Identities = 100/208 (48%), Positives = 136/208 (65%)
 Frame = +2

Query: 83  GDQPELDAPSSEVQQSPPPGNEEKGIHLRLLLSNXXXXXXXXXXXXXXNQIKSQSGARVQ 262
           G   EL   S E   S    + EK  H+R L+SN               + +++SGAR+Q
Sbjct: 10  GSPEELTKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQ 69

Query: 263 LSRNNEYFPGTTDRIIMVSGAVDDILKAADLILSRLLDEFYAEDGAEIDPESKVRLVVPN 442
           LSRN E+FPGTTDRIIM+SG++ +++   +LIL +L  E +AEDG E++P  ++RLVVPN
Sbjct: 70  LSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPN 129

Query: 443 SSCGGIIGKAGVIIRSLIEDSGADIKISPQDMYYPGLQDRLVIITGTLAVQMRAIELVIQ 622
           SSCGGIIGK G  I+S IE+S A IKISP D  Y GL DRLV ++GT   QMRAI+L++ 
Sbjct: 130 SSCGGIIGKGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILA 189

Query: 623 ILMKDPYYQHSPNTPFPYAALMYNGMNY 706
            L +D +Y  + ++P+ YAA  YN +NY
Sbjct: 190 KLTEDDHYSQNVHSPYSYAA-GYNSVNY 216



 Score = 77.0 bits (188), Expect(2) = 5e-64
 Identities = 35/42 (83%), Positives = 41/42 (97%)
 Frame = +1

Query: 733 ADEHIGLVVGRGGRNLMEISQQSGARIKISDRGDFMSGTSDR 858
           +DEHIGLV+GRGGRN+MEI+Q +GARIKISDRGDF+SGTSDR
Sbjct: 241 SDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFISGTSDR 282