BLASTX nr result
ID: Mentha22_contig00001939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00001939
(567 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 145 6e-33
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 143 3e-32
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 142 6e-32
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 142 6e-32
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 142 8e-32
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 141 1e-31
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis... 140 3e-31
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana] 140 3e-31
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana] 140 3e-31
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab... 140 3e-31
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 139 5e-31
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 139 7e-31
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 137 1e-30
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 137 1e-30
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 137 2e-30
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 137 2e-30
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 137 2e-30
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 137 2e-30
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 137 2e-30
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 137 2e-30
>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
gi|557112071|gb|ESQ52355.1| hypothetical protein
EUTSA_v10017023mg [Eutrema salsugineum]
Length = 292
Score = 145 bits (367), Expect = 6e-33
Identities = 77/117 (65%), Positives = 88/117 (75%), Gaps = 6/117 (5%)
Frame = -3
Query: 400 FVRNVALSSDLE-ESDG-----AEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTV 239
FVRNVA++ D E E DG A REQSFS DLK+FVGNLPFDVDS+ LA+LF+ AGTV
Sbjct: 63 FVRNVAVTEDFEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSARLAQLFESAGTV 122
Query: 238 EQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
E VEVIYDK TGRSRGFGFV M ++FNG+E++GR LRVN GPPPPKRE
Sbjct: 123 EIVEVIYDKITGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 179
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV
Sbjct: 208 RVYVGNLSWGVDDMALENLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRT 267
Query: 136 FNGHEIEGRALRVN-CGPPPPKRE 68
NG +++GR +RV+ PP+R+
Sbjct: 268 LNGADLDGRQIRVSEAEARPPRRQ 291
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 143 bits (361), Expect = 3e-32
Identities = 74/116 (63%), Positives = 89/116 (76%), Gaps = 5/116 (4%)
Frame = -3
Query: 400 FVRNVALSSDLE-ESDG----AEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVE 236
FVRNVA++S+ E E DG A +EQSFS DLK+FVGNLPF+VDS++LA+LF+ AG VE
Sbjct: 59 FVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118
Query: 235 QVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VEVIYDK TGRSRGFGFV M ++FNG+E++GR LRVN GPPPPKRE
Sbjct: 119 MVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 136 FNGHEIEGRALRVN-CGPPPPKRE 68
+G +++GR +RV+ PP+R+
Sbjct: 265 LDGADLDGRQIRVSEAEARPPRRQ 288
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
Length = 309
Score = 142 bits (358), Expect = 6e-32
Identities = 81/172 (47%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Frame = -3
Query: 562 HFLSLAPRXXXXXXXXXXXXXXXXXXXXXXXFKILPKLVLGIXXXXXXXXXXXSFVRNVA 383
+FLSL P+ K LPKLVL + FVR VA
Sbjct: 41 NFLSLTPQTLSLHHTSSSAAASASTLFTPSSLKPLPKLVLALSPATNFAHTTSRFVRCVA 100
Query: 382 LSSDLEES-------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVEV 224
+SS+++E+ D + EQSFSPDLK+FVGNLPF+VDS+ LA LF++AG VE VEV
Sbjct: 101 ISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEV 160
Query: 223 IYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
IYDK +GRSRGFGFV M ++FNG+E++GRALRVN GPPP K +
Sbjct: 161 IYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGPPPAKSD 212
Score = 67.8 bits (164), Expect = 2e-09
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD+S L LF E G V++ V+YD+ +GRSRGFGFV E
Sbjct: 228 RVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEA 287
Query: 136 FNGHEIEGRALRVNCGPPPPK 74
+G +++GR++RV+ P+
Sbjct: 288 LDGADLDGRSIRVSPAEERPR 308
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 142 bits (358), Expect = 6e-32
Identities = 73/116 (62%), Positives = 88/116 (75%), Gaps = 5/116 (4%)
Frame = -3
Query: 400 FVRNVALSSDLE-ESDG----AEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVE 236
FVRNVA++S+ E E DG A ++QSFS DLK+FVGNLPF+VDS++LA+LF+ AG VE
Sbjct: 59 FVRNVAITSEFEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118
Query: 235 QVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VEVIYDK TGRSRGFGFV M +FNG+E++GR LRVN GPPPPKRE
Sbjct: 119 MVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKRE 174
Score = 65.5 bits (158), Expect = 9e-09
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV
Sbjct: 205 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 264
Query: 136 FNGHEIEGRALRVN-CGPPPPKRE 68
NG +++GR +RV+ PP+R+
Sbjct: 265 LNGADLDGRQIRVSEAEARPPRRQ 288
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 142 bits (357), Expect = 8e-32
Identities = 73/116 (62%), Positives = 88/116 (75%), Gaps = 5/116 (4%)
Frame = -3
Query: 400 FVRNVALSSDLE-ESDG----AEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVE 236
F RNVA++S+ E E DG A +EQSFS DLK+FVGNLPF+VDS++LA+LF+ AG VE
Sbjct: 59 FARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118
Query: 235 QVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VEVIYDK TGRSRGFGFV M ++FNG+E++GR LRVN GPPPPKRE
Sbjct: 119 MVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 136 FNGHEIEGRALRVN-CGPPPPKRE 68
+G +++GR +RV+ PP+R+
Sbjct: 265 LDGADLDGRQIRVSEAEARPPRRQ 288
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 141 bits (356), Expect = 1e-31
Identities = 74/115 (64%), Positives = 88/115 (76%), Gaps = 4/115 (3%)
Frame = -3
Query: 400 FVRNVALSS-DLEE---SDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQ 233
FVRNVA S ++EE SD A +EQSFS DLK+FVGNLPF+VDS++LA+LF+ AG VE
Sbjct: 59 FVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEM 118
Query: 232 VEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VEVIYDK TGRSRGFGFV M ++FNG+E++GR LRVN GPPPPKRE
Sbjct: 119 VEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 173
Score = 65.5 bits (158), Expect = 9e-09
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV
Sbjct: 200 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 259
Query: 136 FNGHEIEGRALRVN-CGPPPPKRE 68
NG +++GR +RV+ PP+R+
Sbjct: 260 LNGADLDGRQIRVSEAEARPPRRQ 283
>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
[Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 342
Score = 140 bits (352), Expect = 3e-31
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 400 FVRNVALSSDLEES---------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEA 248
FVRNVA+SSD E D A SFSPDLK+FVGNL F+VDS++LA+LF+ A
Sbjct: 63 FVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESA 122
Query: 247 GTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
G VE VEVIYDK TGRSRGFGFV M ++FNG+E EGR LRVN GPPPPKRE
Sbjct: 123 GNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKRE 182
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 136 FNGHEIEGRALRVNCGPPPPKR 71
NG +++GR +RV+ P R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 140 bits (352), Expect = 3e-31
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 400 FVRNVALSSDLEES---------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEA 248
FVRNVA+SSD E D A SFSPDLK+FVGNL F+VDS++LA+LF+ A
Sbjct: 55 FVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESA 114
Query: 247 GTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
G VE VEVIYDK TGRSRGFGFV M ++FNG+E EGR LRVN GPPPPKRE
Sbjct: 115 GNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKRE 174
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 136 FNGHEIEGRALRVNCGPPPPKR 71
NG +++GR +RV+ P R
Sbjct: 302 LNGADLDGRQIRVSEAEARPPR 323
>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 140 bits (352), Expect = 3e-31
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 400 FVRNVALSSDLEES---------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEA 248
FVRNVA+SSD E D A SFSPDLK+FVGNL F+VDS++LA+LF+ A
Sbjct: 63 FVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESA 122
Query: 247 GTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
G VE VEVIYDK TGRSRGFGFV M ++FNG+E EGR LRVN GPPPPKRE
Sbjct: 123 GNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKRE 182
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 136 FNGHEIEGRALRVNCGPPPPKR 71
NG +++GR +RV+ P R
Sbjct: 310 LNGADLDGRQIRVSEAEARPPR 331
>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 140 bits (352), Expect = 3e-31
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 400 FVRNVALSSDLEES---------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEA 248
FVRNVA+SSD E D A SFSPDLK+FVGNL F+VDS++LA+LF+ A
Sbjct: 63 FVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESA 122
Query: 247 GTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
G VE VEVIYDK TGRSRGFGFV M ++FNG+E EGR LRVN GPPPPKRE
Sbjct: 123 GNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKRE 182
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L LF E G V + VIYD+ +GRS+GFGFV +
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 136 FNGHEIEGRALRVNCGPPPPKR 71
NG +++GR +RV+ P R
Sbjct: 315 LNGADLDGRQIRVSEAEARPPR 336
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 139 bits (350), Expect = 5e-31
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 400 FVRNVALSSDLEES---------DGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEA 248
FVRNVA+SSD E D A SFSPDLK+FVGNL F+VDS++LA+LF+ A
Sbjct: 57 FVRNVAVSSDFEVEEDDMFADGDDSAPVERTSFSPDLKLFVGNLSFNVDSAQLAQLFESA 116
Query: 247 GTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
G VE VEVIYDK TGRSRGFGFV M ++FNG+E EGR LRVN GPPPPKRE
Sbjct: 117 GNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEYEGRPLRVNAGPPPPKRE 176
Score = 63.9 bits (154), Expect = 3e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L +F E G V + VIYD+ +GRS+GFGFV +
Sbjct: 243 RLYVGNLSWGVDDMALENMFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 302
Query: 136 FNGHEIEGRALRVNCGPPPPKR 71
NG +++GR +RV+ P R
Sbjct: 303 LNGADLDGRQIRVSEAEARPPR 324
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 139 bits (349), Expect = 7e-31
Identities = 71/113 (62%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDG--AEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SSD E+ + ++ E SFSPDLK+FVGNLPF+VDS+ LA LF++AG VE VE
Sbjct: 61 FVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVE 120
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPP +RE
Sbjct: 121 VIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRE 173
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/83 (40%), Positives = 47/83 (56%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+++VGNL + VD L LF E G V + VIYD+ TGRSRGFGFV E
Sbjct: 205 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 264
Query: 136 FNGHEIEGRALRVNCGPPPPKRE 68
+G ++ GR++RV P+R+
Sbjct: 265 LDGVDLNGRSIRVTMAEARPRRQ 287
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X2 [Solanum tuberosum]
Length = 291
Score = 137 bits (346), Expect = 1e-30
Identities = 73/113 (64%), Positives = 82/113 (72%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSS--DLEESDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVALS LE+ G E +FSPDLK+FVGNLPF VDS+ LAELF+ AG VE VE
Sbjct: 65 FVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+EI+GRALRVN GP P KRE
Sbjct: 125 VIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRE 177
Score = 71.2 bits (173), Expect = 2e-10
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = -3
Query: 361 SDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGF 182
S G ++F +V+VGNL + VD L ELF + G V +V+YD+ +GRSRGFGF
Sbjct: 192 SYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGF 251
Query: 181 VIMXXXXXXXXXXERFNGHEIEGRALRVNCGPP-PPKRE 68
V + NG +++GR++RV+ PP+R+
Sbjct: 252 VTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQ 290
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X1 [Solanum tuberosum]
Length = 301
Score = 137 bits (346), Expect = 1e-30
Identities = 73/113 (64%), Positives = 82/113 (72%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSS--DLEESDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVALS LE+ G E +FSPDLK+FVGNLPF VDS+ LAELF+ AG VE VE
Sbjct: 65 FVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+EI+GRALRVN GP P KRE
Sbjct: 125 VIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRE 177
Score = 71.2 bits (173), Expect = 2e-10
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = -3
Query: 361 SDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGF 182
S G ++F +V+VGNL + VD L ELF + G V +V+YD+ +GRSRGFGF
Sbjct: 202 SYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGF 261
Query: 181 VIMXXXXXXXXXXERFNGHEIEGRALRVNCGPP-PPKRE 68
V + NG +++GR++RV+ PP+R+
Sbjct: 262 VTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQ 300
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 137 bits (345), Expect = 2e-30
Identities = 70/116 (60%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
Frame = -3
Query: 400 FVRNVALSS-----DLEESDGAEAREQSFSPDLKVFVGNLPFDVDSSELAELFKEAGTVE 236
FVR V LS D+E+ D E++FSPDLK+FVGNLPF DS+ LAELF+ AG VE
Sbjct: 55 FVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVE 114
Query: 235 QVEVIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VEVIYDK TGRSRGFGFV M ++FNG+E++GRALRVN GPPP KRE
Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRE 170
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -3
Query: 334 SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXX 155
SF +V+VGNL + VD L LF E G V +V+YD+ +GRSRGFGFV
Sbjct: 183 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242
Query: 154 XXXXERFNGHEIEGRALRVN-CGPPPPKRE 68
E +G ++ GRA+RV+ PP+R+
Sbjct: 243 NNAIESLDGVDLNGRAIRVSPAEARPPRRQ 272
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 137 bits (345), Expect = 2e-30
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDGAEAREQ--SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SS+ ++ + + E +FSPDLK+FVGNLPF VDS++LA LF+ AG VE VE
Sbjct: 65 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPPP+RE
Sbjct: 125 VIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177
Score = 68.6 bits (166), Expect = 1e-09
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF+E G V + +V+YD+ +GRSRGFGFV +
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257
Query: 136 FNGHEIEGRALRVNCGPPPPKRER 65
NG ++ GRA+RV+ P+R +
Sbjct: 258 LNGVDLAGRAIRVSVAEARPQRRQ 281
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 137 bits (345), Expect = 2e-30
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDGAEAREQ--SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SS+ ++ + + E +FSPDLK+FVGNLPF VDS++LA LF+ AG VE VE
Sbjct: 65 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPPP+RE
Sbjct: 125 VIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177
Score = 55.5 bits (132), Expect = 1e-05
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFV 179
+V+VGNL + VD L LF+E G V + +V+YD+ +GRSRGFGFV
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFV 243
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 137 bits (345), Expect = 2e-30
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDGAEAREQ--SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SS+ ++ + + E +FSPDLK+FVGNLPF VDS++LA LF+ AG VE VE
Sbjct: 65 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPPP+RE
Sbjct: 125 VIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177
Score = 55.5 bits (132), Expect = 1e-05
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFV 179
+V+VGNL + VD L LF+E G V + +V+YD+ +GRSRGFGFV
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFV 243
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 137 bits (345), Expect = 2e-30
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDGAEAREQ--SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SS+ ++ + + E +FSPDLK+FVGNLPF VDS++LA LF+ AG VE VE
Sbjct: 65 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPPP+RE
Sbjct: 125 VIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177
Score = 59.7 bits (143), Expect = 5e-07
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFVIMXXXXXXXXXXER 137
+V+VGNL + VD L LF+E G V + +V+YD+ +GRSRGFGFV
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAE-------- 249
Query: 136 FNGHEIEGRALRVNCGPPPPKRER 65
++ GRA+RV+ P+R +
Sbjct: 250 ---EDLAGRAIRVSVAEARPQRRQ 270
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 137 bits (345), Expect = 2e-30
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = -3
Query: 400 FVRNVALSSDLEESDGAEAREQ--SFSPDLKVFVGNLPFDVDSSELAELFKEAGTVEQVE 227
FVRNVA+SS+ ++ + + E +FSPDLK+FVGNLPF VDS++LA LF+ AG VE VE
Sbjct: 65 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVE 124
Query: 226 VIYDKATGRSRGFGFVIMXXXXXXXXXXERFNGHEIEGRALRVNCGPPPPKRE 68
VIYDK TGRSRGFGFV M ++FNG+E+EGR LRVN GPPPP+RE
Sbjct: 125 VIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177
Score = 55.5 bits (132), Expect = 1e-05
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 316 KVFVGNLPFDVDSSELAELFKEAGTVEQVEVIYDKATGRSRGFGFV 179
+V+VGNL + VD L LF+E G V + +V+YD+ +GRSRGFGFV
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFV 243