BLASTX nr result

ID: Mentha22_contig00001871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00001871
         (537 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339032.1| PREDICTED: eukaryotic translation initiation...    56   5e-06

>ref|XP_006339032.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A-like
            isoform X1 [Solanum tuberosum]
            gi|565343841|ref|XP_006339033.1| PREDICTED: eukaryotic
            translation initiation factor 3 subunit A-like isoform X2
            [Solanum tuberosum]
          Length = 938

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 536  KLDEIAXXXXXXXXXXXXXXXXXXXEILGRSVAAAPVAVKSDISTVDXXXXXXXXXXXXX 357
            KLD IA                   E+LG+S+   PV++++  STV              
Sbjct: 831  KLDAIAEKQRQRELELEEKKRLEREEVLGKSM---PVSLET--STVGRPSEAGATAAAPT 885

Query: 356  PGKFVPRFRRAAAEVGGHAPPPATDKWTSGSRTEXXXXXXXXXXXXXXXPGGTRT-WQSS 180
            PGKFVPRFRR   +V G APPP TD+W+SG R +                GG+RT W SS
Sbjct: 886  PGKFVPRFRREKIDVAGQAPPPETDRWSSGGRRD----------ERNSFGGGSRTSWSSS 935


Top