BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00001615
         (1923 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...  1082   0.0  
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...  1076   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1052   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   993   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   988   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   985   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   979   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...   979   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   979   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...   962   0.0  
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob...   956   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   952   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   952   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              948   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...   943   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   942   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   937   0.0  
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...   936   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...   933   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...   931   0.0  

>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 1082 bits (2797), Expect = 0.0
 Identities = 525/613 (85%), Positives = 567/613 (92%), Gaps = 3/613 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GKH+VFLDGDW+G+CKDSSSFV+KLRR+RR++E+P+Q+EIKRD+H+GEVRIF D+GRILR
Sbjct: 599  GKHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEVRIFNDSGRILR 658

Query: 1741 PLFVVQNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVK 1562
            PL VVQNLKKIKDLKG+FSFQSLL +GI+E IG EEEEDCQTAWG+ YLFTAELENPPVK
Sbjct: 659  PLLVVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAWGVRYLFTAELENPPVK 718

Query: 1561 YSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQL 1382
            Y+HCE DSSFLLGLS GI+PF NHDHARRVLYQS KHSQQAIGYSTTN  IRVDTNSH L
Sbjct: 719  YTHCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNSIIRVDTNSHSL 778

Query: 1381 YYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNR 1202
            YYPQR LFRT+LSD LG+S +SDH+KGM+PRP+F+NGQCAIVA+NVHLGYNQEDSLVMNR
Sbjct: 779  YYPQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLGYNQEDSLVMNR 838

Query: 1201 ASLERGMFRTEHVRSYKAEVENSEG-AGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            +SLERGMFRTEHVRS+KA+VENSE   GK++K DE+VSFGK+QSKIGRVDSL+DDGFPYI
Sbjct: 839  SSLERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRVDSLEDDGFPYI 898

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQTGDIVIGKHAA GVDHSIKLKHTE+GMV KVVLSANDEGKNFAVVSLRQVR+PCL
Sbjct: 899  GANLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAVVSLRQVRSPCL 958

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF++ GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 959  GDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1018

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                LKYATPFS+PSVEDITAQLHRLG+SRWGGERVYDGRTGEKV SLIFMGPTFYQRLT
Sbjct: 1019 LGGGLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEKVNSLIFMGPTFYQRLT 1078

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1079 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1138

Query: 304  SSQMHICRKCKKMANVIQRPVF--GGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELF 131
            SSQMHICRKCK MANVIQRP    GGRKIRGP+CR CESVEDVVRVNVPYGAKLLCQELF
Sbjct: 1139 SSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVVRVNVPYGAKLLCQELF 1198

Query: 130  SMGISLSFDTELC 92
            SMGISL FDTELC
Sbjct: 1199 SMGISLKFDTELC 1211


>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score = 1076 bits (2783), Expect = 0.0
 Identities = 518/610 (84%), Positives = 559/610 (91%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GKH+ FLDG+WVG+CKDS SFVAKLRR+RR +E+PYQ+EIKRD  H EVRIFADAGRILR
Sbjct: 212  GKHKAFLDGEWVGMCKDSKSFVAKLRRKRRMMEMPYQVEIKRDVRHREVRIFADAGRILR 271

Query: 1741 PLFVVQNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVK 1562
            PL +VQ LKKIK+LKG FSFQSLL +GIVEFIG EEEEDC+TAWGI YLF+A+ E P VK
Sbjct: 272  PLLLVQKLKKIKELKGEFSFQSLLDNGIVEFIGAEEEEDCRTAWGIKYLFSADKEKPLVK 331

Query: 1561 YSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQL 1382
            Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+STTNPSIRVDTNSH L
Sbjct: 332  YTHCELDCSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNSHNL 391

Query: 1381 YYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNR 1202
            YYPQR +F TMLSD LGKS+YS HHKGM+P P+FFNGQCAIVAVNVHLGYNQEDS+VMNR
Sbjct: 392  YYPQRPIFGTMLSDSLGKSKYSSHHKGMLPHPEFFNGQCAIVAVNVHLGYNQEDSIVMNR 451

Query: 1201 ASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIG 1022
            AS+ERGMFRTEHVRSYKAEV+NS+  GK+LK D++V FGK +SKIGRVDSLDDDGFP+IG
Sbjct: 452  ASMERGMFRTEHVRSYKAEVDNSDAPGKKLKPDDLVDFGKTESKIGRVDSLDDDGFPFIG 511

Query: 1021 ANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLG 842
            ANLQTGDIVIGKHAA+GVDHSIKLKHTERGMVQKVVLS+ND+GKNF VVSLRQVR+PCLG
Sbjct: 512  ANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDDGKNFGVVSLRQVRSPCLG 571

Query: 841  DKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXX 662
            DKFSSMHGQKGVLGFLESQENFPF K+GIVPDIVINPHAFPSRQTPGQ            
Sbjct: 572  DKFSSMHGQKGVLGFLESQENFPFTKEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAL 631

Query: 661  XXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTH 482
               LKYATPFSTPSV+DITAQLHRLG+SRWG ERVYDGRTGEKVESLIFMGPTFYQRLTH
Sbjct: 632  GGALKYATPFSTPSVDDITAQLHRLGFSRWGDERVYDGRTGEKVESLIFMGPTFYQRLTH 691

Query: 481  MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 302
            MAEDK+KFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS
Sbjct: 692  MAEDKIKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 751

Query: 301  SQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMG 122
            SQMH+CRKC+ MANVIQR VFGGRKIRGPYCRFC+SVEDVVR+NVPYGAKLLCQELFSMG
Sbjct: 752  SQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFCDSVEDVVRLNVPYGAKLLCQELFSMG 811

Query: 121  ISLSFDTELC 92
            ISL FDTELC
Sbjct: 812  ISLKFDTELC 821


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 512/611 (83%), Positives = 555/611 (90%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GKH++FLDGD VGVC+DSSSFV+ LRRRR+K EVP+Q+EIK D+ +GEVR+FADAGRILR
Sbjct: 595  GKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQVEIKMDQSNGEVRVFADAGRILR 654

Query: 1741 PLFVVQNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVK 1562
            PL VV+NL+KI DLK H  FQSLL  GIVE IGPEEEEDCQTAWG  YLF AELENPPVK
Sbjct: 655  PLLVVRNLRKINDLKSHVFFQSLLDVGIVELIGPEEEEDCQTAWGTKYLFMAELENPPVK 714

Query: 1561 YSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQL 1382
            YSHCE DSSFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+STT+P+IRVDTNSHQL
Sbjct: 715  YSHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTSPNIRVDTNSHQL 774

Query: 1381 YYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNR 1202
            YYPQ+ LFRT+LSDCLGK   S   KG++P P FFNGQCAIVAVNVHLGYNQEDSLVMNR
Sbjct: 775  YYPQKPLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNGQCAIVAVNVHLGYNQEDSLVMNR 834

Query: 1201 ASLERGMFRTEHVRSYKAEVENSEGAG-KRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            ASLERGMFR+EHVRSYK++V+NSE A  K+ KAD+++SFGK+QSKIGRVDSLD+DGFPY+
Sbjct: 835  ASLERGMFRSEHVRSYKSDVDNSEAAPVKKFKADDLISFGKVQSKIGRVDSLDEDGFPYV 894

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQTGDIVIGK  A GVDHSIKLKHTERGMVQKV+LSA+DEG+N+AVVSLRQVR+PCL
Sbjct: 895  GANLQTGDIVIGKCTATGVDHSIKLKHTERGMVQKVILSADDEGRNYAVVSLRQVRSPCL 954

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 955  GDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1014

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                LKYATPFS+PSVEDITAQLHRLG+SRWG E+VYDGRTGE ++SLIFMGPTFYQRLT
Sbjct: 1015 LGGGLKYATPFSSPSVEDITAQLHRLGFSRWGAEKVYDGRTGEALKSLIFMGPTFYQRLT 1074

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1075 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1134

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMHICRKCK MANVIQRPVFGGRK+RGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM
Sbjct: 1135 SSQMHICRKCKNMANVIQRPVFGGRKVRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 1194

Query: 124  GISLSFDTELC 92
            GISL FDTE+C
Sbjct: 1195 GISLKFDTEIC 1205


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  993 bits (2566), Expect = 0.0
 Identities = 482/611 (78%), Positives = 536/611 (87%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+  GEVRIF+D+GRILR
Sbjct: 608  GKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDSGRILR 667

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV NLKKIK LKG  + FQSLL +GI+EFIGPEEEEDC+TAWG++Y+  A+ ENPP 
Sbjct: 668  PLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKADKENPPA 727

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ RVDTN+HQ
Sbjct: 728  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQ 787

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGYNQEDSLVMN
Sbjct: 788  LYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMN 847

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EHVRSYKAEV+N E   K+LK ++ V+FGK QSKIGRVDSLDDDGFP+I
Sbjct: 848  RASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFI 907

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ+GDI+IGK A +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVSLRQVR+PCL
Sbjct: 908  GANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCL 967

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 968  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1027

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 KYATPFST SV+ I  QL   G++RWG ERVY+GRTGE V SLIFMGPTFYQRL 
Sbjct: 1028 LGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLI 1087

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1088 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1147

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMHIC KCK MANVIQR V GG K+RGP+CRFCESVED+V+VNVPYGAKLLCQELFSM
Sbjct: 1148 SSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSM 1206

Query: 124  GISLSFDTELC 92
            GISL FDTE+C
Sbjct: 1207 GISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  988 bits (2555), Expect = 0.0
 Identities = 480/611 (78%), Positives = 534/611 (87%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+  GEVRIF+D GRILR
Sbjct: 608  GKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDPGRILR 667

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV NLKKIK LKG  + FQSLL +GI+E IGPEEEEDC+TAWG++Y+  A+ ENPP 
Sbjct: 668  PLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPPA 727

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ RVDTN+HQ
Sbjct: 728  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQ 787

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGYNQEDSLVMN
Sbjct: 788  LYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMN 847

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EHVRSYKAEV+N E   K+LK ++ V+FGK QSKIGRVDSLDDDGFP+I
Sbjct: 848  RASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFI 907

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ+GDI+IGK + +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVSLRQVR+PCL
Sbjct: 908  GANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCL 967

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 968  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1027

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 KYATPFST SV+ I  QL   G++RWG ERVY+GRTGE V SLIFMGPTFYQRL 
Sbjct: 1028 LGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLI 1087

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1088 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1147

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMHIC KCK MANVIQR V GG K+RGP+CRFCESVED+V+VNVPYGAKLLCQELFSM
Sbjct: 1148 SSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSM 1206

Query: 124  GISLSFDTELC 92
            GISL FDTE+C
Sbjct: 1207 GISLKFDTEIC 1217


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  985 bits (2547), Expect = 0.0
 Identities = 479/610 (78%), Positives = 530/610 (86%), Gaps = 1/610 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +VFLDG+WVGVC DS SFVA LRR+RR+ EVP+Q+EIKRD+ H EVR+F+DAGRILR
Sbjct: 409  GKVKVFLDGNWVGVCGDSVSFVAALRRKRRRKEVPHQVEIKRDEQHREVRVFSDAGRILR 468

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NL KIK  KG  +SFQSLL  G++EFIG EEEEDC+TAWGI+YLF        V
Sbjct: 469  PLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATV 528

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS  IIPFANHDHARRVLYQS KHSQQA+G++TTNP+IRVDTN+HQ
Sbjct: 529  KYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQ 588

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTM+SDCLGK  Y   H G+VPR ++FNGQCAIVAVNVHLGYNQEDSLVMN
Sbjct: 589  LYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMN 648

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKA+V+N E  GK+ K ++ V+FGK+QSKIGRVDSLDDDGFP+I
Sbjct: 649  RASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFI 708

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIV+G+ A +G DHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVR PCL
Sbjct: 709  GANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCL 768

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIV+NPHAFPSRQTPGQ           
Sbjct: 769  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIA 828

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 KYATPFST SV+ +T QLHR G+SRWG ERVY+GRTGE + SL+FMGPTFYQRLT
Sbjct: 829  CGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLT 888

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 889  HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 948

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMHICRKC  +ANVIQR V GGRKIRGPYCRFCESVE++VRVNVPYGAKLL QELFSM
Sbjct: 949  SSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSM 1008

Query: 124  GISLSFDTEL 95
            GI++ FDTEL
Sbjct: 1009 GITMKFDTEL 1018


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  979 bits (2530), Expect = 0.0
 Identities = 474/615 (77%), Positives = 529/615 (86%), Gaps = 5/615 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+   EVRIF+DAGRI+R
Sbjct: 606  GKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAGRIMR 665

Query: 1741 PLFVVQNLKKIKDLK-----GHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELE 1577
            PL VV NLK IK LK     G + FQ+LL  GI+E IGPEEEEDC+TAWG++YL  A+ E
Sbjct: 666  PLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKE 725

Query: 1576 NPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDT 1397
            NPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST NP+ RVDT
Sbjct: 726  NPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNARVDT 785

Query: 1396 NSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDS 1217
            N+HQLYYPQR LF TMLSD LGK +   H KGM+ RP+++NGQCAIVAVNVHLGYNQEDS
Sbjct: 786  NTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLGYNQEDS 845

Query: 1216 LVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDG 1037
            +VMNRASLERGMFR+EHVRSYKAEV+N E  GK+ K ++ V+FGK QSKIGRVDSLDDDG
Sbjct: 846  VVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRVDSLDDDG 905

Query: 1036 FPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVR 857
            FP+IGANLQ+GDI+IGK+A +G DHS+K+KHTERGMVQKV+LSAND+GKNFAVVSLRQVR
Sbjct: 906  FPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAVVSLRQVR 965

Query: 856  APCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXX 677
            +PCLGDKFSSMHGQKGVLG+LESQENFPF   GIVPDIVINPHAFPSRQTPGQ       
Sbjct: 966  SPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALG 1025

Query: 676  XXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFY 497
                     KYATPFS  SV+ I  QLH  G+SRWG ERVY+GRTGE V SLIFMGPTFY
Sbjct: 1026 KGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLIFMGPTFY 1085

Query: 496  QRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF 317
            QRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF
Sbjct: 1086 QRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF 1145

Query: 316  TLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQE 137
            TLSDSSQMHIC KCK MANVIQR   GG KIRGP+CRFCESVED+V+V+VPYGAKLLCQE
Sbjct: 1146 TLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVPYGAKLLCQE 1204

Query: 136  LFSMGISLSFDTELC 92
            LFSMGISL FDTE+C
Sbjct: 1205 LFSMGISLKFDTEIC 1219


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score =  979 bits (2530), Expect = 0.0
 Identities = 474/615 (77%), Positives = 529/615 (86%), Gaps = 5/615 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+   EVRIF+DAGRI+R
Sbjct: 606  GKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAGRIMR 665

Query: 1741 PLFVVQNLKKIKDLKG-----HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELE 1577
            PL VV NLK IK L G      + FQ+LL  GI+E IGPEEEEDC+TAWG++YL  A+ E
Sbjct: 666  PLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKE 725

Query: 1576 NPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDT 1397
            NPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST NP+IRVDT
Sbjct: 726  NPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDT 785

Query: 1396 NSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDS 1217
            N+HQLYYPQR LF TMLSD LGK + + H +GM+ RP+++NGQCAIVAVNVHLGYNQEDS
Sbjct: 786  NTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGYNQEDS 845

Query: 1216 LVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDG 1037
            +VMNRASLERGMFR+EHVRSYKAEV+N E  GK+ KA++ V+FGK QSKIGRVD LDDDG
Sbjct: 846  VVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVDCLDDDG 905

Query: 1036 FPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVR 857
             PYIGANLQ+GDI+IGK A +G DHS+K+KHTE+GMVQKV+LSANDEGKNFAVVSLRQVR
Sbjct: 906  LPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVSLRQVR 965

Query: 856  APCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXX 677
            +PCLGDKFSSMHGQKGVLG+LESQENFPF   GIVPDIVINPHAFPSRQTPGQ       
Sbjct: 966  SPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALG 1025

Query: 676  XXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFY 497
                     KYATPFS  SV+ I  QLH  G+SRWG ERVY+GRTGE V SLIFMGPTFY
Sbjct: 1026 KGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFMGPTFY 1085

Query: 496  QRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF 317
            QRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF
Sbjct: 1086 QRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF 1145

Query: 316  TLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQE 137
            TLSDSSQMHIC KCK MANVIQRPV GG K+RGP+CRFCESVED+V+V VPYGAKLLCQE
Sbjct: 1146 TLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCESVEDIVKVGVPYGAKLLCQE 1204

Query: 136  LFSMGISLSFDTELC 92
            LFSMGISL FDTE+C
Sbjct: 1205 LFSMGISLKFDTEIC 1219


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  979 bits (2530), Expect = 0.0
 Identities = 477/611 (78%), Positives = 533/611 (87%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK++VFLDGDWVGVC+D  SFV +LR +RR  E+P Q+EIKRD+  GEVRIF+DAGRILR
Sbjct: 589  GKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILR 648

Query: 1741 PLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NLKK+K  KG  F+FQSLL  GIVE IG EEEEDC TAWGI YL     ++PPV
Sbjct: 649  PLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPV 707

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQAIG+STTNP+IRVDT SHQ
Sbjct: 708  KYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 767

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTM+SDCLGK  YS+ HKG+VPRP++FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 768  LYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMN 827

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYK+EV+N+E   K+ K+++ V FGK+QSKIGRVDSLDDDGFP+I
Sbjct: 828  RASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFI 887

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND+GKNFAVVSLRQVR PCL
Sbjct: 888  GANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCL 947

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 948  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1007

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                L++ATPFST SV+ I  QLHR G+SRWG ERVY+GRTGE + SLIFMGPTFYQRL 
Sbjct: 1008 CGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLI 1067

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1068 HMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1127

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            S+ MHICR+CK ++NVIQR V GGRK+RGPYCR+CES E++V+VNVPYGAKLLCQELFSM
Sbjct: 1128 SAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSM 1187

Query: 124  GISLSFDTELC 92
            GISL F+T+LC
Sbjct: 1188 GISLKFETQLC 1198


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  962 bits (2487), Expect = 0.0
 Identities = 469/611 (76%), Positives = 527/611 (86%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +VFL+G+WVGVC+DS SF A++RR+RR  E P+Q+EIKRD+H GEVRIF+D GRILR
Sbjct: 574  GKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILR 633

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV NL +IK  KG +++FQ+LL  GI+E +G EEEEDC+TAW I YL T      PV
Sbjct: 634  PLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPV 693

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+STTNP+IRVDT SHQ
Sbjct: 694  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 753

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTM SDCLGK  +    KG++P+P+ +NGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 754  LYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 813

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            R+SLERGMFR+EHVRSYKAEV+N E   KR K+++IV+FGKIQSKIGRVDSLDDDGFPY+
Sbjct: 814  RSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYV 873

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+ND+GKN+AVVSLRQVR+PCL
Sbjct: 874  GANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCL 933

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 934  GDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 993

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                +KYATPFST SV+ IT QLHR G+SRWG ERVY+GRTGE V SLIFMGPTFYQRL 
Sbjct: 994  CGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLI 1053

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGA+ANLHERL TLSD
Sbjct: 1054 HMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSD 1113

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMH+CR CK +ANVI+R V GGRKIRGPYCR C+SV+D+VRVNVPYGAKLLCQELFSM
Sbjct: 1114 SSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSM 1173

Query: 124  GISLSFDTELC 92
            GI+L F+T+LC
Sbjct: 1174 GINLKFETQLC 1184


>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 961

 Score =  956 bits (2472), Expect = 0.0
 Identities = 469/615 (76%), Positives = 527/615 (85%), Gaps = 5/615 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +VFL+G+WVGVC+DS SF A++RR+RR  E P+Q+EIKRD+H GEVRIF+D GRILR
Sbjct: 347  GKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILR 406

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV NL +IK  KG +++FQ+LL  GI+E +G EEEEDC+TAW I YL T      PV
Sbjct: 407  PLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPV 466

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+STTNP+IRVDT SHQ
Sbjct: 467  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 526

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTM SDCLGK  +    KG++P+P+ +NGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 527  LYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 586

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            R+SLERGMFR+EHVRSYKAEV+N E   KR K+++IV+FGKIQSKIGRVDSLDDDGFPY+
Sbjct: 587  RSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYV 646

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+ND+GKN+AVVSLRQVR+PCL
Sbjct: 647  GANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCL 706

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 707  GDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 766

Query: 664  XXXXLKYATPFSTPSVEDITAQL----HRLGYSRWGGERVYDGRTGEKVESLIFMGPTFY 497
                +KYATPFST SV+ IT QL    HR G+SRWG ERVY+GRTGE V SLIFMGPTFY
Sbjct: 767  CGGSMKYATPFSTISVDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFY 826

Query: 496  QRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLF 317
            QRL HMAEDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGA+ANLHERL 
Sbjct: 827  QRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLV 886

Query: 316  TLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQE 137
            TLSDSSQMH+CR CK +ANVI+R V GGRKIRGPYCR C+SV+D+VRVNVPYGAKLLCQE
Sbjct: 887  TLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQE 946

Query: 136  LFSMGISLSFDTELC 92
            LFSMGI+L F+T+LC
Sbjct: 947  LFSMGINLKFETQLC 961


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  952 bits (2462), Expect = 0.0
 Identities = 470/610 (77%), Positives = 524/610 (85%), Gaps = 1/610 (0%)
 Frame = -3

Query: 1918 KHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRP 1739
            K +VFL+G+WVGVC+DS  FVA+LRR RR+ ++P Q+EIKRD+   EVRIF+DAGRILRP
Sbjct: 594  KDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRP 653

Query: 1738 LFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVK 1562
            L VVQNL KI+  KG + +FQSLL  GI+EF+G EEEEDC TAWGI +L +       +K
Sbjct: 654  LLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLK 713

Query: 1561 YSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQL 1382
            Y+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+ TTNP+IRVDT SHQL
Sbjct: 714  YTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQL 773

Query: 1381 YYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNR 1202
            YYPQR LFRT+ SDCLGK   +  H G+VP+P+ +NGQ AIVAVNVHLGYNQEDSLVMNR
Sbjct: 774  YYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNR 833

Query: 1201 ASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIG 1022
            ASLERGMFR+EH+RSYKA+V+N E   KR K D+ V+FGKI SKIGRVDSLDDDGFP+IG
Sbjct: 834  ASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIG 893

Query: 1021 ANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLG 842
            ANLQ+GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+NDEGKNFAVVSLRQVR+PCLG
Sbjct: 894  ANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLG 953

Query: 841  DKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXX 662
            DKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPH+FPSRQTPGQ            
Sbjct: 954  DKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIAC 1013

Query: 661  XXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTH 482
               +KYATPFST SVE IT QLHR G+SRWG ERVY+GRTGE V SLIFMGPTFYQRL H
Sbjct: 1014 GGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIH 1073

Query: 481  MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 302
            MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDS
Sbjct: 1074 MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 1133

Query: 301  SQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMG 122
            SQMHIC+KCK +ANVIQR V GGRKIRGPYCR CESV+++V+VNVPYGAKLLCQELFSMG
Sbjct: 1134 SQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMG 1193

Query: 121  ISLSFDTELC 92
            ISL F+T LC
Sbjct: 1194 ISLKFETRLC 1203


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  952 bits (2460), Expect = 0.0
 Identities = 466/617 (75%), Positives = 526/617 (85%), Gaps = 7/617 (1%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +VF+DGDW+GVCKDS SFV++LRR+RR+ E+P Q+EIKRD+   EVRIF DAGRILR
Sbjct: 584  GKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIFMDAGRILR 643

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+N+ KIK L+G +++FQ+LL  GI+E +G EEEEDC TAWGI YL     +  P+
Sbjct: 644  PLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPI 703

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            K++HCE D SFLLGLS GIIPFANHDHARRVLYQS KHS QAIG+ TTNPSIRVDT SHQ
Sbjct: 704  KFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQ 763

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            L+YPQR LFRTM+SDCLGK  Y  +H  ++PRP+ +NGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 764  LFYPQRPLFRTMISDCLGKPGYGHNH--ILPRPELYNGQNAIVAVNVHLGYNQEDSLVMN 821

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKAEV+N E   KR  +D++V+FGKIQSKIGRVDSLDDDGFP+I
Sbjct: 822  RASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQSKIGRVDSLDDDGFPFI 881

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIVIGK+A +G DHSIKLKHTERGMVQKVVLS+ND+GKNF+VVSLRQVR+PCL
Sbjct: 882  GANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCL 941

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQ------XXXXX 683
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 942  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1001

Query: 682  XXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPT 503
                       +YATPF+TPSV+ IT QLHR G+S+WG ER+YDGRTGE V SLIF+GPT
Sbjct: 1002 ALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEMVRSLIFIGPT 1061

Query: 502  FYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHER 323
            FYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHER
Sbjct: 1062 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHER 1121

Query: 322  LFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLC 143
            LFTLSDS QMHICRKCK +ANVIQR V GGRK+RGPYCR C+S +D+V+ NVPYGAKLLC
Sbjct: 1122 LFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICDSGDDIVKANVPYGAKLLC 1181

Query: 142  QELFSMGISLSFDTELC 92
            QELFSMGI+L FDTE C
Sbjct: 1182 QELFSMGITLKFDTEFC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  948 bits (2450), Expect = 0.0
 Identities = 467/611 (76%), Positives = 522/611 (85%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK++VFLDGDWVGVC+D  SFV +LR +RR  E+P Q+EIKRD+  GEVRIF+DAGRILR
Sbjct: 625  GKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILR 684

Query: 1741 PLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NLKK+K  KG  F+FQSLL  GIVE IG EEEEDC TAWGI YL     ++PPV
Sbjct: 685  PLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPV 743

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQAIG+STTNP+IRVDT SHQ
Sbjct: 744  KYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 803

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            LYYPQR LFRTM+SD              +PRP++FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 804  LYYPQRPLFRTMISD--------------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMN 849

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYK+EV+N+E   K+ K+++ V FGK+QSKIGRVDSLDDDGFP+I
Sbjct: 850  RASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFI 909

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND+GKNFAVVSLRQVR PCL
Sbjct: 910  GANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCL 969

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 970  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1029

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                L++ATPFST SV+ I  QLHR G+SRWG ERVY+GRTGE + SLIFMGPTFYQRL 
Sbjct: 1030 CGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLI 1089

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD
Sbjct: 1090 HMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1149

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            S+ MHICR+CK ++NVIQR V GGRK+RGPYCR+CES E++V+VNVPYGAKLLCQELFSM
Sbjct: 1150 SAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSM 1209

Query: 124  GISLSFDTELC 92
            GISL F+T+LC
Sbjct: 1210 GISLKFETQLC 1220


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score =  943 bits (2438), Expect = 0.0
 Identities = 462/611 (75%), Positives = 515/611 (84%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GKH+VFL+GDWVG+C DS  FV KLRR RR  ++P+Q+EIKRD+H GEVRIF+DAGRILR
Sbjct: 592  GKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHKGEVRIFSDAGRILR 651

Query: 1741 PLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VVQ LKKIK  KG   +FQ  L  GI+EFIG EEEEDC+TAW I YLF  E +   V
Sbjct: 652  PLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFMEE-QGSVV 710

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIGYSTTNP++RVDT SH 
Sbjct: 711  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNLRVDTLSHN 770

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            L+YPQR LFRTM++D LGK  Y   H G +P+P++FNGQ AIVAVNVHLGYNQEDS+VMN
Sbjct: 771  LHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMN 830

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKAEVEN     KR K DE V+FGKIQSK GRVD+LDDDGFP +
Sbjct: 831  RASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRVDNLDDDGFPCV 890

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GA+LQ+GDI+IG+ + +G DHSIKLKHTERGMVQKVVLS+ND GKNFAVVSLRQVR+P L
Sbjct: 891  GASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVSLRQVRSPSL 950

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLE QENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 951  GDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1010

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 +YATPFST SV+DIT QLHR G+SRWG ERVY+GRTGE V  LIFMGPTFYQRL 
Sbjct: 1011 CGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRLI 1070

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD
Sbjct: 1071 HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 1130

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SS M++C+KC+  ANVI+R + GGRKIRGPYCR C+S +D+VRVNVPYGAKLLCQELFSM
Sbjct: 1131 SSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYGAKLLCQELFSM 1190

Query: 124  GISLSFDTELC 92
            GISL F+T LC
Sbjct: 1191 GISLKFETRLC 1201


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  942 bits (2434), Expect = 0.0
 Identities = 465/610 (76%), Positives = 519/610 (85%), Gaps = 1/610 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GKH+VFL+G+WVGVC+DS  FV +LR  RR+ E+PYQ+EIKRD+   EVRIF+DAGRILR
Sbjct: 582  GKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILR 641

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NL KIK  KG ++ F SLL  GI+EFIG EEEEDC TAWGI +L        P+
Sbjct: 642  PLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPM 701

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KYSHCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+STTNP+IRVDT SHQ
Sbjct: 702  KYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 761

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            L+YPQR LFRTM+SDCL           ++P+P+ FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 762  LHYPQRPLFRTMISDCL-----------VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMN 810

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKAEV+N E   KR K+++ ++FGKIQSKIGRVDSLDDDGFP+I
Sbjct: 811  RASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFI 870

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GAN+Q+GDIVIGK A +G DHS+KLKHTERGMVQKVVLS+NDEGKNFAVVSLRQVR+PCL
Sbjct: 871  GANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCL 930

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   G+VPDIVINPHAFPSRQTPGQ           
Sbjct: 931  GDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIA 990

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 +YATPFST SV+DI  QLHR  +SRWG ERVY+GRTGE V SLIFMGPTFYQRL 
Sbjct: 991  CGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLV 1050

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD
Sbjct: 1051 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 1110

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SS+MHIC+KCK +ANVIQR V GGRKIRGPYCR CESV+D+V+V+VPYGAKLLCQELFSM
Sbjct: 1111 SSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSM 1170

Query: 124  GISLSFDTEL 95
            GISL FDT +
Sbjct: 1171 GISLKFDTRV 1180


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  937 bits (2422), Expect = 0.0
 Identities = 456/611 (74%), Positives = 519/611 (84%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK+R+FLDG+WVGVC+DS SFV  +RR+RR+    +Q+E+KRD+   EVRIF+DAGRILR
Sbjct: 590  GKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILR 649

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NL +I   KG +++FQSLL  GI+E IG EEEEDC+ AW I +L   E      
Sbjct: 650  PLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHLMEDE---GTT 706

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            KYSHCE D SFLLGLS G++PFANHDHARR L+QS KHS QAIG+S TN + RVDT SHQ
Sbjct: 707  KYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQ 766

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            L+YPQR LFRTM +DCLG   Y   H G++P+P+F+NGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 767  LHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMN 826

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKAEV+N E + KR K+D+ ++FGK QSKIGRVDSLDDDGFPYI
Sbjct: 827  RASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYI 886

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ+GDIVIG+ A +G DHSIKLKHTE+GMVQKVVLS+ND+GKN+AVVSLRQVR+PCL
Sbjct: 887  GANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCL 946

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQ           
Sbjct: 947  GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1006

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                LKYATPFSTPSV+ IT QLHR G+SRWG ERVY+GRTGE + SLIFMGPTFYQRL 
Sbjct: 1007 AGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLI 1066

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD
Sbjct: 1067 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 1126

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMH+C+KCK +A+VIQR V GGRK+RGPYCR CES +D+VRVNVPYGAKLLCQELFSM
Sbjct: 1127 SSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSM 1186

Query: 124  GISLSFDTELC 92
            GI+L F+T+LC
Sbjct: 1187 GINLKFETQLC 1197


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score =  936 bits (2418), Expect = 0.0
 Identities = 454/611 (74%), Positives = 516/611 (84%), Gaps = 1/611 (0%)
 Frame = -3

Query: 1921 GKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILR 1742
            GK +VFL+GDWVGVC+DS SFV +LRR RR+ ++P+Q+EIKRD H GEVRIF+DAGRILR
Sbjct: 593  GKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILR 652

Query: 1741 PLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPV 1565
            PL VV+NL K+K  KG   SFQ  L +GI+E IG EEEEDC TAWGI YLF  +      
Sbjct: 653  PLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAT 712

Query: 1564 KYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQ 1385
            K++HCE D SFLLGLS GIIP+ANHDHARRVLYQ+ KHSQQAIG+STTNP++RVDT SHQ
Sbjct: 713  KFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQ 772

Query: 1384 LYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMN 1205
            L+YPQR LF+TM SDCLGK      H  +VP+P+++NGQ AIVAVNVHLG+NQEDS+VMN
Sbjct: 773  LHYPQRPLFQTMTSDCLGKP---GRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMN 829

Query: 1204 RASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYI 1025
            RASLERGMFR+EH+RSYKAEV+N E   KR K D+ V+FGK+QSK GRVDSLDDDGFPY+
Sbjct: 830  RASLERGMFRSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYV 889

Query: 1024 GANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCL 845
            GANLQ+GDI+IG+ + +G DHSIKLKHTERGMVQKV+LS+ND+GKNFAVVSLRQVR+PCL
Sbjct: 890  GANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCL 949

Query: 844  GDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 665
            GDKFSSMHGQKGVLGFLESQENFPF   G+VPDIVINPHAFPSRQTPGQ           
Sbjct: 950  GDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1009

Query: 664  XXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLT 485
                 +YATPFST SV+DIT QLH  G+SRWG ERVY+G TG  V SLIFMGPTFYQRL 
Sbjct: 1010 CGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLI 1069

Query: 484  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 305
            HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD
Sbjct: 1070 HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 1129

Query: 304  SSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSM 125
            SSQMH+C+KCK +A VI R V GGRKIRGP+CR C+S +D+VRVNVPYGAKLLCQELFSM
Sbjct: 1130 SSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSM 1189

Query: 124  GISLSFDTELC 92
            GISL F+T  C
Sbjct: 1190 GISLKFETRFC 1200


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score =  933 bits (2411), Expect = 0.0
 Identities = 457/608 (75%), Positives = 520/608 (85%), Gaps = 1/608 (0%)
 Frame = -3

Query: 1912 RVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRPLF 1733
            +V L+GDWVGVC DSSSFVA+LR RRR+ E+P+Q+EIKRD+   EVRI++DAGRILRPL 
Sbjct: 599  KVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIYSDAGRILRPLL 658

Query: 1732 VVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYS 1556
            VV NL KIK  K   +SFQSLL  G++E IGPEEEEDC TAWG++YLF  E +   VKY+
Sbjct: 659  VVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRS-VKYT 717

Query: 1555 HCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYY 1376
            HCE D SFLLGLS  ++PFANHDHARRVLYQS KHS QAIG+STTNP+IRVDT SHQL+Y
Sbjct: 718  HCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHY 777

Query: 1375 PQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRAS 1196
            PQ+ LFRTM SDCLGK  +S     + P+ +F+NGQ AIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 778  PQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRAS 837

Query: 1195 LERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGAN 1016
            L+RGMFR+EH+RSYK+E++N E + K+ K ++IV+F K+QSKIGRVDSLDDDGFPY+GAN
Sbjct: 838  LQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGFPYVGAN 897

Query: 1015 LQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLGDK 836
            LQ+GDI+IGK A +G D+S+KLKHTERG VQKVVLS+NDEGKNFAVVSLRQVR+P LGDK
Sbjct: 898  LQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDK 957

Query: 835  FSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 656
            FSSMHGQKGVLGFLESQENFPF + GIVPDIVINPHAFPSRQTPGQ              
Sbjct: 958  FSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG 1017

Query: 655  XLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTHMA 476
             LK ATPFSTPSV+ IT QLHR G+SRWG ERVY+GRTGE V SLIFMGPTFYQRL HM+
Sbjct: 1018 ILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMS 1077

Query: 475  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 296
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ
Sbjct: 1078 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQ 1137

Query: 295  MHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGIS 116
            +HIC KCKK+ANVI RPV GGRKIRGPYCR CES +D+V  +VPYGAKLLCQELFSMGI+
Sbjct: 1138 IHICSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGIN 1197

Query: 115  LSFDTELC 92
            L F+T+LC
Sbjct: 1198 LKFETQLC 1205


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score =  931 bits (2406), Expect = 0.0
 Identities = 463/610 (75%), Positives = 517/610 (84%), Gaps = 1/610 (0%)
 Frame = -3

Query: 1918 KHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRP 1739
            K +VFL+GDWVGVC DS+SFVA+LR RRRK E+P+Q+EIKRD    EVRI +DAGRILRP
Sbjct: 592  KDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDPSQEEVRILSDAGRILRP 651

Query: 1738 LFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVK 1562
            L VV NL KIK  K    SFQSLL +G++E IGPEEEEDC+TAWG+ YLF  E ++  VK
Sbjct: 652  LLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAWGVPYLFGKEGKSS-VK 710

Query: 1561 YSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQL 1382
            Y+HCE D SFLLGLS  ++PFANHDHARRVLYQS KHS QAIG+STTNP IRVD  SHQL
Sbjct: 711  YTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPDIRVDALSHQL 770

Query: 1381 YYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNR 1202
            +YPQ+ LF+TM SDCLGK  Y    K ++P+ +F+NGQ AIVAVNVHLGYNQEDSLVMNR
Sbjct: 771  FYPQKPLFQTMTSDCLGKPGYLGPSK-LLPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNR 829

Query: 1201 ASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIG 1022
            ASL+RGMFR+EH+RSYKAE EN E   K+ K ++IV+FGKIQSKIGRVDSLDDDGFP++G
Sbjct: 830  ASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVNFGKIQSKIGRVDSLDDDGFPFVG 889

Query: 1021 ANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLG 842
            ANLQ GDI+IG+ A +G DHSIKLKHTERG VQKVVLS+NDEGKNFAVVSLRQVR+P LG
Sbjct: 890  ANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLG 949

Query: 841  DKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXX 662
            DKFSSMHGQKGVLGFLESQENFPF K GIVPDIVINPHAFPSRQTPGQ            
Sbjct: 950  DKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 1009

Query: 661  XXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTH 482
               L+ ATPFST SVE IT QLHR G+SRWG ERVY+GRTGE V SLIFMGPTFYQRL H
Sbjct: 1010 VGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHH 1069

Query: 481  MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 302
            M+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANL+ERLFTLSDS
Sbjct: 1070 MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDS 1129

Query: 301  SQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMG 122
            SQ+HIC KCK +ANVI RPV GGRKIRGPYCRFCES +D+V  +VPYGAKLLCQELFSMG
Sbjct: 1130 SQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVAHVPYGAKLLCQELFSMG 1189

Query: 121  ISLSFDTELC 92
            I+L F+TELC
Sbjct: 1190 INLKFETELC 1199