BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00001510
         (3697 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...  1646   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1521   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  1508   0.0  
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...  1450   0.0  
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1381   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1379   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1293   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]  1278   0.0  
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...  1250   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1247   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...  1246   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1243   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1238   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1214   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...  1214   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...  1211   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...  1184   0.0  
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...  1169   0.0  
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...  1164   0.0  
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...  1162   0.0  

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 1646 bits (4262), Expect = 0.0
 Identities = 826/1116 (74%), Positives = 927/1116 (83%), Gaps = 23/1116 (2%)
 Frame = -3

Query: 3551 EVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCKSC 3372
            EVV +VRF F TDEE RK S++KITNPNL+DIL +P PGGLYD AMG LD+ S   C+SC
Sbjct: 9    EVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI--CESC 66

Query: 3371 GLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLERI 3192
            G  A  CNGHCGHIELV+ +YNPLL N L++ILNKTC YC  F +  EE EN+VSQLE I
Sbjct: 67   GQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQLELI 126

Query: 3191 REGDLAGAKRLGLLQKMAKKK----IGTDP-----EESDGSHASHSGVSSDGENQDEHEK 3039
            R+GDLAGAK+L L      KK    + TD      E+S GSH SHS V SDGEN  + ++
Sbjct: 127  RKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHFKDDE 186

Query: 3038 DAFWDSTLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTE-MRSNA 2862
             A W S  L E+ SV+NE+L+++ KKC NC+   PKI+KPTFGWF V G +  + +R N 
Sbjct: 187  QASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAIRENV 246

Query: 2861 IRSSRLDVTYS-GDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXK------------ 2721
            IRS +LD + S G ED  SSEV+N  D+S+                              
Sbjct: 247  IRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKGVNRA 306

Query: 2720 RDLNRELQEKADLFSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSM 2541
            + LN    +     SG LLPS+VRDIL+ LWE EA  CSYI DIQRQ  K  G   G+SM
Sbjct: 307  KKLNPGSGDPNFYLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKPFGNKTGYSM 366

Query: 2540 FFLETILVPPIRFRPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWM 2361
            FFLET+LVPPIRFRP AKGGDSVMEH  T+LLGKVLQ+NIALGNAH N AE S+II RWM
Sbjct: 367  FFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVN-AEKSKIISRWM 425

Query: 2360 DLQQSINVLYDSKTANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPY 2181
            +LQQSINV +DSKTA S +QK+   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPY
Sbjct: 426  ELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPY 485

Query: 2180 LAVNEIGIPPHFALKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANK 2001
            LAVNEIGIPP+FALKLTYPERVTPWNA KLR AV+NGPDIHPGAT Y DSV+  +LP ++
Sbjct: 486  LAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSVTIVKLPPSQ 545

Query: 2000 KMRIAVSRKLPSSRSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHI 1821
            KMR+A+SRKLPSSR VV+QSGK  + EFEGK V RHLQDGDIVLVNRQPTLHKPSIMAH+
Sbjct: 546  KMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIMAHV 605

Query: 1820 VRVLPGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD 1641
            VRVL GERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD
Sbjct: 606  VRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD 665

Query: 1640 TVRGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEG 1461
            TVRGLIQDHIV AVL+TMKNTF+ RSEF+QLLYGSGVFA+GPGS P + S KV+++D+EG
Sbjct: 666  TVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSRKVTLIDTEG 725

Query: 1460 LVESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEED 1281
            +VES+LPA+WKPEPLWTGKQVITALLNHITRGCAP TV+NQGK+PKNYF   SY  GEED
Sbjct: 726  VVESVLPAIWKPEPLWTGKQVITALLNHITRGCAPFTVENQGKIPKNYFFGNSYTRGEED 785

Query: 1280 QDHNAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQ 1101
            +D NAEH+LL+WKNELVRGVIDKAQFGK+GLVHTVQELYG++SAGI LSALSR+FT+FLQ
Sbjct: 786  EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLSALSRVFTLFLQ 845

Query: 1100 FHGFTCGVDDLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAIC 921
             HGFTCGVDDLIILP++D QRKEKLEGEDVGE VHCDFVKFKPGQIGP+ELQLEIEK IC
Sbjct: 846  IHGFTCGVDDLIILPDYDDQRKEKLEGEDVGEVVHCDFVKFKPGQIGPDELQLEIEKVIC 905

Query: 920  SDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTV 741
            +DRESATA+LDMKMKNKL ++LT EGSQILKHLLT GLLKPFPKNCISVMTTTGAKGSTV
Sbjct: 906  TDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 965

Query: 740  NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFH 561
            NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWD+T+RAGGFITDRFL+GLRPQEYYFH
Sbjct: 966  NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGLRPQEYYFH 1025

Query: 560  CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVH 381
            CMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKVCYDYTVRD+DGSIVQFYYGEDG+DVH
Sbjct: 1026 CMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIVQFYYGEDGIDVH 1085

Query: 380  KTSFLKNFKALEDNRETIWQKFQNHREFNSYISELP 273
            +TSFL NFKAL+DNRETI QKFQ+ REFNSYI +LP
Sbjct: 1086 RTSFLNNFKALQDNRETICQKFQHKREFNSYIKKLP 1121



 Score =  108 bits (270), Expect = 2e-20
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            ++  FLELVKQKYL+SLA++GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1174 EQDAFLELVKQKYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1233


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1521 bits (3939), Expect = 0.0
 Identities = 755/1107 (68%), Positives = 899/1107 (81%), Gaps = 12/1107 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A+E V +V F+FMTDEEVR+ SV+K+T+PNLLD L+ PVP GLYD AMGPLD +S  +CK
Sbjct: 5    ASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYS--QCK 62

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
             C  +   C+GHCGHIELV+P YNPLL N L ++L +TCFYC+HFRA + EVE  VS+LE
Sbjct: 63   FCCQS--NCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +GD+ GAK +  L         TD EES+GSH S +    + ++  E+ K   WD+ 
Sbjct: 121  LIAKGDVVGAKMIDALSP----DNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNF 176

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              TE+ +V++  LK + +KC NCK  NPKI KP+FG FH+  IS  ++R N I S R   
Sbjct: 177  QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYINSGRRFN 235

Query: 2837 TYS--GDEDRPSSEVLNTSD------YSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADL 2682
             +   G E+ PS EV+N ++       SL                   D +  ++++ D 
Sbjct: 236  LHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKARKRQGGDQSDVVEQQKDS 295

Query: 2681 FSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRF 2502
            FS + LPS+VR I+  LWENEAPLC++ CDIQ Q+   SG + G SMFFL++ILVPPI+F
Sbjct: 296  FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355

Query: 2501 RPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSK 2322
            RP AKGGDS+MEH HT+LLGKV+QANIALGNAH N A  S+II R MDLQQS+NVL+DSK
Sbjct: 356  RPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415

Query: 2321 TANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFA 2142
            TA+   QK+   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYL+VNEIGIPP+FA
Sbjct: 416  TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475

Query: 2141 LKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSS 1962
            L+LTYPER+TPWNA K+R AVINGP+ HPGA ++ D +++ +LP+NKKMR+A+SRKLPSS
Sbjct: 476  LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535

Query: 1961 RSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMH 1782
            R  V+QSG+  E+EFEGK+V RHLQDGD+VLVNRQPTLHKPSIMAH+VRVL GE+TLRMH
Sbjct: 536  RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595

Query: 1781 YANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAA 1602
            YANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIV A
Sbjct: 596  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655

Query: 1601 VLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPE 1422
            V++TMKNTFLT  EF+QLLYGSGVFAAGP    G+ S KVSVVD EG+V+++LPAVWKP+
Sbjct: 656  VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715

Query: 1421 PLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASAS----YKNGEEDQDHNAEHDL 1254
            PLWTGKQVITALLNH+T+GCAPCTVKN+GK+P  YF S S    Y++ EE +D  AE++ 
Sbjct: 716  PLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAENEF 775

Query: 1253 LIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVD 1074
            LIWKNELVRGVIDKAQFGK+GLVHT+QELYGSN AGILLSALSRLFTIFLQ HGFTCGVD
Sbjct: 776  LIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCGVD 835

Query: 1073 DLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAICSDRESATAT 894
            DL+ILP++D++RKE+LEG+DVGEE HCDFVKFK G+IGP ELQLEIEKA+ S++E+ATA 
Sbjct: 836  DLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAATAA 895

Query: 893  LDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYL 714
            LDMKMKNKL N+    GSQ  K LL KGLLKPFP+NCI++MT TGAKGSTVNFQQIS+YL
Sbjct: 896  LDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYL 951

Query: 713  GQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLV 534
            GQQELEGKRVPRMVSGKTLP FPPWD  +RAGG+++DRFLSGLRPQEYYFHCMAGREGLV
Sbjct: 952  GQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLV 1011

Query: 533  DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFK 354
            DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD+DGSI+QFYYGEDGVDVH+TSFLKNFK
Sbjct: 1012 DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFK 1071

Query: 353  ALEDNRETIWQKFQNHREFNSYISELP 273
            AL++N+ETI QK ++ R+ NSYI +LP
Sbjct: 1072 ALKNNQETICQKLRHGRKLNSYIEKLP 1098



 Score =  105 bits (263), Expect = 1e-19
 Identities = 51/60 (85%), Positives = 56/60 (93%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            +E  FLELV+QKY +SLA+SGEPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1136 EEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1195


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 1508 bits (3903), Expect = 0.0
 Identities = 748/1107 (67%), Positives = 892/1107 (80%), Gaps = 12/1107 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A+E V +V F+FMTDEEVR+ SV+K+T+PNLLD L+ PVP GLYD AMGPLD +S  +CK
Sbjct: 5    ASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYS--QCK 62

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
             C  +   C+GHCGHIELV+P YNPLL N L ++L +TCFYC+HFRA + EVE  VS+LE
Sbjct: 63   FCSQS--NCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +GD+ GAK +  L         TD EES+GSH S +    +  +  E+ K   WD+ 
Sbjct: 121  LIAKGDVVGAKMIDALSP----DNSTDREESEGSHMSCTMDDLNVRDHCEYNKRPSWDNF 176

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              TE+ +V++  LK + +KC NCK  NPKI KP+FG FH+  IS  ++R N I S R   
Sbjct: 177  QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYINSGRRFN 235

Query: 2837 TYS--GDEDRPSSEVLNTSD------YSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADL 2682
             +   G E+ PS EV+N ++       SL                   D +  ++++ D 
Sbjct: 236  LHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKGRKRQGGDQSDVVEQQKDS 295

Query: 2681 FSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRF 2502
            FS + LPS+VR I+  LWENEAPLC++ CDIQ Q+   SG + G SMFFL++ILVPP++F
Sbjct: 296  FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVPPVKF 355

Query: 2501 RPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSK 2322
            RP AKGGDS+MEH HT+LLGKV+QANIALGNAH N A  S+II R MDLQQS+NVL+DSK
Sbjct: 356  RPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415

Query: 2321 TANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFA 2142
            TA+   QK+   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYL+VNEIGIPP+FA
Sbjct: 416  TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475

Query: 2141 LKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSS 1962
             +LTYPER+TPWNA K+R AVINGP+ HPGA ++ D +++ +LP+NKKMR+A+SRKLPSS
Sbjct: 476  SRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRKLPSS 535

Query: 1961 RSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMH 1782
            R  V+QSG+  E+EFEGK+V RHLQDGD+VLVNRQPTLHKPSIMAH+VRVL GE+TLRMH
Sbjct: 536  RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595

Query: 1781 YANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAA 1602
            YANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIV A
Sbjct: 596  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655

Query: 1601 VLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPE 1422
            V++TMKNTFL+  EF+QLLYGSGVFAAGP    G+ S KVS+VD EG+V+++LPAVWKP+
Sbjct: 656  VILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAVWKPK 715

Query: 1421 PLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASAS----YKNGEEDQDHNAEHDL 1254
            PLWTGKQVITALLNH+T GC PCTVKN+GK+P  YF S S    Y++ EE +D  AE++ 
Sbjct: 716  PLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDRTAENEF 775

Query: 1253 LIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVD 1074
            LIWKNELVRGVIDKAQFGK+GLVHT+QELYGSN AGILLSALSRLFTIFLQ HGFTCG+D
Sbjct: 776  LIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCGID 835

Query: 1073 DLIILPNFDLQRKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAICSDRESATAT 894
            DL+ILP++D++RKE+LEG+DVGEE HCDFVKFK G+IGP ELQLEIEKAI S++E ATA 
Sbjct: 836  DLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSNKEVATAA 895

Query: 893  LDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYL 714
            LDMKMKNKL N+    GSQ  K LL KGLLKPFP+NCI++MT TGAKGSTVNFQQIS+YL
Sbjct: 896  LDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYL 951

Query: 713  GQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLV 534
            GQQELEGKRVPRMVSGKTLP FP WD  +RAGG+++DRFLSGLRPQEYYFHCMAGREGLV
Sbjct: 952  GQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLV 1011

Query: 533  DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFK 354
            DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD+DGSI+QFYYGEDGVDVH+TSFLKNFK
Sbjct: 1012 DTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFK 1071

Query: 353  ALEDNRETIWQKFQNHREFNSYISELP 273
            AL++N+ETI QK ++  + NSYI +LP
Sbjct: 1072 ALKNNQETICQKLRHGCKLNSYIEKLP 1098



 Score =  104 bits (259), Expect = 3e-19
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            +E  FLELV QKY +SLA+SGEPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1136 EEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1195


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 747/1096 (68%), Positives = 860/1096 (78%), Gaps = 2/1096 (0%)
 Frame = -3

Query: 3554 AEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDI-LERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A  V +VRF FM+DEEVRK SV+ ITN  L+D   ++P PGGLYD A+GPL D S  KC 
Sbjct: 1    AMAVEAVRFGFMSDEEVRKHSVVGITNLKLVDDDTDKPFPGGLYDPALGPLGDSS--KCL 58

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG  +  C GH GHI+LV P YNPL    L +ILN  CF C HF+  + EVE  VSQL 
Sbjct: 59   SCGQRSYHCPGHFGHIDLVFPVYNPLSFKFLRNILNTACFSCRHFKVGRLEVETCVSQLH 118

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             IR+GD+AGA+RL  L  ++         ++ GSH++ S V S+ E+  +      WDS 
Sbjct: 119  LIRKGDIAGARRLRSLGGLS---------DNQGSHSTGSVVLSESESGQDLNWCRSWDSI 169

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFH-VTGISKTEMRSNAIRSSRLD 2841
             LTE+  VLNEF +K+EKKC NC+  +PKIT P FGWF+ V  I ++  +   IR  +  
Sbjct: 170  QLTEAMGVLNEFFRKKEKKCKNCESRSPKITNPIFGWFYAVYAIHRSSSKGTHIREGK-- 227

Query: 2840 VTYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLLP 2661
                   D+PS E    S+ S                     LN  L  +  L     LP
Sbjct: 228  -------DKPSPE---NSEASSSIISADSPGNSGKKGSSSNKLNLGLVGQRHL-----LP 272

Query: 2660 SEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGG 2481
            SEVR+++ +LWENE  LCS+ICDIQ+Q  K+SG    +S+FF ETILV PI+FR   +GG
Sbjct: 273  SEVREMVMQLWENEESLCSFICDIQQQQGKLSGNRMDYSIFFFETILVNPIKFRAPTRGG 332

Query: 2480 DSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQ 2301
            +SVMEH HT+LLGKVL++NIAL NA     + S+ I  WM+LQQSINVL+D K+  S S+
Sbjct: 333  NSVMEHPHTVLLGKVLESNIALRNA-----QPSKFISHWMELQQSINVLFDGKS--STSK 385

Query: 2300 KNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPE 2121
            K G  GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+LTYPE
Sbjct: 386  KAGVSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 445

Query: 2120 RVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQS 1941
            RVTPWNA KLR+AV+NGPDIHPGAT Y DSV++ +LP NKK R+A+SRKLPSSR   ++ 
Sbjct: 446  RVTPWNATKLRNAVVNGPDIHPGATTYIDSVATMKLPLNKKARVALSRKLPSSRGATAEV 505

Query: 1940 GKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSSY 1761
            G+  + +FEGK+V RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL GERTLRMHYANCSSY
Sbjct: 506  GE-SQLDFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGERTLRMHYANCSSY 564

Query: 1760 NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMKN 1581
            NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPT+GDTVRGLIQDHIVAAVL+T+K 
Sbjct: 565  NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIVAAVLLTLKR 624

Query: 1580 TFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGKQ 1401
            TFLT SEF+QLLYGSGVFA G  S+  + S KVS    +GL+  ILPA+WKPEPLWTGKQ
Sbjct: 625  TFLTCSEFNQLLYGSGVFALGRHSYVSNSSQKVSGHAPDGLINPILPAIWKPEPLWTGKQ 684

Query: 1400 VITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHDLLIWKNELVRGV 1221
            VI+ALLNHITRG APC VKNQ K+P  YF        +ED+D NAE++ L+WKNELVRGV
Sbjct: 685  VISALLNHITRGFAPCIVKNQTKLPSTYFTDNPAME-DEDEDQNAENNFLVWKNELVRGV 743

Query: 1220 IDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQ 1041
            IDKAQFGK+GLVHTVQELYGS SAG LL+A SRLFT+FLQ HGFTCGVDDL+ILP++D++
Sbjct: 744  IDKAQFGKFGLVHTVQELYGSESAGNLLTAFSRLFTMFLQIHGFTCGVDDLMILPDYDVK 803

Query: 1040 RKEKLEGEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAICSDRESATATLDMKMKNKLTN 861
            RKEKLE EDVGEEVHCDF+ FKPGQIG EELQLEIEKAIC DRESATA LDMKMKNKLT 
Sbjct: 804  RKEKLEQEDVGEEVHCDFINFKPGQIGREELQLEIEKAICRDRESATALLDMKMKNKLTM 863

Query: 860  RLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVP 681
            +LTTEGSQ+LKHLLT GLLKPFP+NCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVP
Sbjct: 864  KLTTEGSQVLKHLLTDGLLKPFPQNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVP 923

Query: 680  RMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 501
            RMVSGKTLPSFPPWD+ +RAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 924  RMVSGKTLPSFPPWDFASRAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 983

Query: 500  LQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQ 321
            LQRCL+KNLESLKV YDYTVRD+DGSI+QF YGEDGVD HKTSFLKNFKAL +N+ETI Q
Sbjct: 984  LQRCLVKNLESLKVGYDYTVRDADGSIIQFCYGEDGVDAHKTSFLKNFKALSNNQETIQQ 1043

Query: 320  KFQNHREFNSYISELP 273
            KFQN  +FN YI +LP
Sbjct: 1044 KFQNKHQFNFYIKKLP 1059



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            F+ +V+QK+L+SL  +GEPVGVIAAQS+GEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1088 FMRVVEQKFLSSLVPAGEPVGVIAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1143


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1381 bits (3574), Expect = 0.0
 Identities = 706/1125 (62%), Positives = 846/1125 (75%), Gaps = 32/1125 (2%)
 Frame = -3

Query: 3551 EVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCKSC 3372
            E V +V+F+F TDEEVRK S  KIT+P +LD ++RPVPGGLYD A+G +D+  N  C+SC
Sbjct: 59   EFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE--NTPCQSC 116

Query: 3371 GLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLERI 3192
            G  +  C GHCGHI+LV+  YNPLL N L ++L KTCF+C+HF+     V+ YVSQLE I
Sbjct: 117  GQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELI 176

Query: 3191 REGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGV--SSDGENQDEHEKDAFWDST 3018
             +GD+ GAK L  +           PE+SDGSH S S    SS  +N   H K   W S 
Sbjct: 177  SKGDVVGAKNLDSISPSESSY----PEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSL 232

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
               E+ SV++ FLK + + C NCK  +P++TKPTFGWFH+ G+S  + R+N IR S+L+ 
Sbjct: 233  QCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLER 292

Query: 2837 TYSG-DEDRPSSEVLNTSDY--------------SLXXXXXXXXXXXXXXXXXKRDLNRE 2703
              S   E++ SSEV N +D               S+                       E
Sbjct: 293  PLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIE 352

Query: 2702 LQEKADLFSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETI 2523
              ++   FSG LLPSEVRDI+ RLWENEA LCS+I DI ++    SG   G+SMFFLETI
Sbjct: 353  FIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETI 412

Query: 2522 LVPPIRFRPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSI 2343
            LVPPI+FRP +KG  SVMEH  T+LLGKVLQANIALGNAH N++E S+II RWMDLQQSI
Sbjct: 413  LVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSI 472

Query: 2342 NVLYDSKTANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEI 2163
            NVL+D KTA  Q Q++   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 473  NVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEI 532

Query: 2162 GIPPHFALKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAV 1983
            GIPP+FAL+LTYPE+VTPWN  KLR A+INGP+IHPGAT+Y D +S+ +L  NKKMRI++
Sbjct: 533  GIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISI 592

Query: 1982 SRKLPSSRSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPG 1803
            SRKLPSSR VV+Q G+  ++EFEGKIV RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL G
Sbjct: 593  SRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKG 652

Query: 1802 ERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLI 1623
            E+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QYIVP++GD +RGLI
Sbjct: 653  EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLI 712

Query: 1622 QDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESIL 1443
            QDHIV+AVL+T K+TFLTR +++QLLY SG+ ++G GS  G    KVSV+DSE  ++ +L
Sbjct: 713  QDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVSVLDSEDEMQPLL 771

Query: 1442 PAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFAS-----ASYKNGEEDQ 1278
            PA+WKPEPLW+GKQVITA+LNHITRG  P T +  GK+P+ YF S      S K  +   
Sbjct: 772  PAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGS 831

Query: 1277 DH---------NAEHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALS 1125
            D          + E+ LLI KNELVRGVIDKAQF KYGLVH VQELYGSN+AGILLS LS
Sbjct: 832  DRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLS 891

Query: 1124 RLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKPGQIGPEEL 948
            RLFT+FLQ HGFTCGVDDL+I PN+D+ RK +L+  E++GE VHC F+    G+I P +L
Sbjct: 892  RLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKL 951

Query: 947  QLEIEKAICSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMT 768
            Q+E+EK I S+ E+A   LD  MKN+L N LT   S++ K LL KGL+KPFPKNC+S+MT
Sbjct: 952  QVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKGLVKPFPKNCLSLMT 1007

Query: 767  TTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSG 588
            TTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  ARAGGFI+DRFL+G
Sbjct: 1008 TTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTG 1067

Query: 587  LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFY 408
            L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYTVRDSDGSIVQF 
Sbjct: 1068 LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFN 1127

Query: 407  YGEDGVDVHKTSFLKNFKALEDNRETIWQKFQNHREFNSYISELP 273
            YG+DGVDVH+TSF+  F+AL  N E + +KF    +FN YI +LP
Sbjct: 1128 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLP 1172



 Score =  104 bits (259), Expect = 3e-19
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K++ F+ LVKQKY++SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPR
Sbjct: 1198 KQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPR 1257


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1379 bits (3570), Expect = 0.0
 Identities = 702/1111 (63%), Positives = 840/1111 (75%), Gaps = 18/1111 (1%)
 Frame = -3

Query: 3551 EVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCKSC 3372
            E V +V+F+F TDEEVRK S  KIT+P +LD ++RPVPGGLYD A+G +D+  N  C+SC
Sbjct: 10   EFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE--NTPCQSC 67

Query: 3371 GLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLERI 3192
            G  +  C GHCGHI+LV+  YNPLL N L ++L KTCF+C+HF+     V+ YVSQLE I
Sbjct: 68   GQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELI 127

Query: 3191 REGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGV--SSDGENQDEHEKDAFWDST 3018
             +GD+ GAK L  +           PE+SDGSH S S    SS  +N   H K   W S 
Sbjct: 128  SKGDVVGAKNLDSISPSESSY----PEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSL 183

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
               E+ SV++ FLK + + C NCK  +P++TKPTFGWFH+ G+S  + R+N IR S+L+ 
Sbjct: 184  QCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLER 243

Query: 2837 TYSG-DEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLLP 2661
              +G D D   S +  T                            E  ++   FSG LLP
Sbjct: 244  PLNGVDTDETHSSIAPTDGIQ--------DTVTKRLERKGAQAPIEFIKQKSFFSGPLLP 295

Query: 2660 SEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGG 2481
            SEVRDI+ RLWENEA LCS+I DI ++    SG   G+SMFFLETILVPPI+FRP +KG 
Sbjct: 296  SEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQ 355

Query: 2480 DSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQ 2301
             SVMEH  T+LLGKVLQANIALGNAH N++E S+II RWMDLQQSINVL+D KTA  Q Q
Sbjct: 356  ISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQ 415

Query: 2300 KNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPE 2121
            ++   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+LTYPE
Sbjct: 416  RDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 475

Query: 2120 RVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQS 1941
            +VTPWN  KLR A+INGP+IHPGAT+Y D +S+ +L  NKKMRI++SRKLPSSR VV+Q 
Sbjct: 476  KVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQP 535

Query: 1940 GKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSSY 1761
            G+  ++EFEGKIV RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL GE+TLRMHYANCS+Y
Sbjct: 536  GRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTY 595

Query: 1760 NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMKN 1581
            NADFDGDE+NVHFPQDEISRAEAYNIVNAN QYIVP++GD +RGLIQDHIV+AVL+T K+
Sbjct: 596  NADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKD 655

Query: 1580 TFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGKQ 1401
            TFLTR +++QLLY SG+ ++G GS  G    KVSV+DSE  ++ +LPA+WKPEPLW+GKQ
Sbjct: 656  TFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQ 714

Query: 1400 VITALLNHITRGCAPCTVKNQGKVPKNYFAS-----ASYKNGEEDQDH---------NAE 1263
            VITA+LNHITRG  P T +  GK+P+ YF S      S K  +   D          + E
Sbjct: 715  VITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGE 774

Query: 1262 HDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTC 1083
            + LLI KNELVRGVIDKAQF KYGLVH VQELYGSN+AGILLS LSRLFT+FLQ HGFTC
Sbjct: 775  YKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTC 834

Query: 1082 GVDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAICSDRES 906
            GVDDL+I PN+D+ RK +L+  E++GE VHC F+    G+I P +LQ+E+EK I S+ E+
Sbjct: 835  GVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEA 894

Query: 905  ATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQI 726
            A   LD  MKN+L N LT   S++ K LL KGL+KPFPKNC+S+MTTTGAKGSTVNF QI
Sbjct: 895  AITRLDRMMKNEL-NELT---SKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQI 950

Query: 725  SAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGR 546
            S++LGQQ+LEGKRVPRMVSGKTLP FPPWD  ARAGGFI+DRFL+GL PQEYYFHCMAGR
Sbjct: 951  SSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGR 1010

Query: 545  EGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFL 366
            EGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYTVRDSDGSIVQF YG+DGVDVH+TSF+
Sbjct: 1011 EGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFI 1070

Query: 365  KNFKALEDNRETIWQKFQNHREFNSYISELP 273
              F+AL  N E + +KF    +FN YI +LP
Sbjct: 1071 TEFEALAVNEEVVCEKFGQDGKFNGYIQKLP 1101



 Score =  104 bits (259), Expect = 3e-19
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K++ F+ LVKQKY++SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPR
Sbjct: 1127 KQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPR 1186


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1293 bits (3347), Expect = 0.0
 Identities = 675/1117 (60%), Positives = 816/1117 (73%), Gaps = 19/1117 (1%)
 Frame = -3

Query: 3566 SNMAAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNA 3387
            S  A E + S+ F+F+TDEEVRK S +KITNP LLD++ERPVPGGLYD A+GPL +    
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSE--RT 65

Query: 3386 KCKSCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVS 3207
             CK+CG  +  C GHCGHI+LV+P YNPLL N L  +L +TCF C+HFR ++ +VE  + 
Sbjct: 66   ICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIK 125

Query: 3206 QLERIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHAS----HSGVSSDGENQDEHEK 3039
            QLE I +GD+ GAKRL    +         PEESD SH S    HSGV     N  EH +
Sbjct: 126  QLELIVKGDIVGAKRL----ESVSPSEALYPEESDLSHESCPTIHSGVQC---NDGEHTR 178

Query: 3038 DAFWDSTLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAI 2859
               W S   TE+ SVLN FLK + KKC NC+  NP ITKPTFGWFH +G+S   +R+N I
Sbjct: 179  QQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVI 238

Query: 2858 RSSRLDVTYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLF 2679
               +L            SE+  T+D                    +R    E   +   F
Sbjct: 239  TGHQLGGLLG-------SEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTF 291

Query: 2678 SGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFR 2499
            S  LLPSEV++ L  LW+NEA +CS+I D+Q+Q  +      G +MFFLETILVPPI+FR
Sbjct: 292  SKQLLPSEVKEKLELLWKNEARICSFISDLQQQ--EFGKRKAGPAMFFLETILVPPIKFR 349

Query: 2498 PSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKT 2319
            P  KGGDSVMEH  T+LL KVLQ+NI+LG+AH N  EHS+I+ RW+DLQQSIN L+DSKT
Sbjct: 350  PPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKT 408

Query: 2318 ANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFAL 2139
            A    Q+ G  GICQ LEKK+GLFRQ MMGKRVN+ACRSVISPDPY+ VNEIGIPP FA+
Sbjct: 409  AKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAV 468

Query: 2138 KLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSR 1959
            KLTYPERVTPWN  KLR+AVING + HPGAT+Y D +S  +LP  +K RI++SRKLPSSR
Sbjct: 469  KLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSR 528

Query: 1958 SVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHY 1779
              V+Q+GK  E EFEGKIV RHLQDGD+VLVNRQPTLHKPSIMAH+VRVL GE+TLRMHY
Sbjct: 529  GAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY 588

Query: 1778 ANCS-SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAA 1602
            ANCS +YNADFDGDE+NVHFPQDE+SRAEAYNIVNAN Q++ P+ G+ +RGLIQDHIV+A
Sbjct: 589  ANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSA 648

Query: 1601 VLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPE 1422
            VL+T K+TFL++ EF+QLLY SGV   GP S  G    KV    SE  ++++ PA+WKP+
Sbjct: 649  VLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPK 708

Query: 1421 PLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKN---GEEDQDHNA----- 1266
            PLWTGKQVITA+LNHIT    P TV+   K+P N+F S + ++    EE  D +A     
Sbjct: 709  PLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKE 768

Query: 1265 --EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHG 1092
              E  +L++KNELVRGVIDK QFG+YGLVHTV EL GS++AGILLS LSRLFT +LQ HG
Sbjct: 769  PDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHG 828

Query: 1091 FTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG--QIGPEELQLEIEKAIC 921
            FTCGVDDL+IL N D +RK++LE  E  GE VH +F+  K    +I P  +QL IEK I 
Sbjct: 829  FTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIR 888

Query: 920  SDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTV 741
            SD +SA A LD +M N+L    T   S ++ +LL+ GLLKP  KNCIS+MTT+GAKGS V
Sbjct: 889  SDGDSALAYLDRQMSNELN---TKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKV 945

Query: 740  NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFH 561
            NFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD+ AR+GG+ITDRFL+GLRPQEYYFH
Sbjct: 946  NFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFH 1005

Query: 560  CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVH 381
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TVRD+DGS+VQFYYGEDGVDVH
Sbjct: 1006 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVH 1065

Query: 380  KTSFLKNFKALEDNRETIWQKFQNH-REFNSYISELP 273
            +TSF+  FK L  N++ I+++       FNSYISELP
Sbjct: 1066 QTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELP 1102



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 48/60 (80%), Positives = 52/60 (86%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K      L+KQK+L SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1128 KREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1187


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score = 1278 bits (3307), Expect = 0.0
 Identities = 688/1172 (58%), Positives = 824/1172 (70%), Gaps = 79/1172 (6%)
 Frame = -3

Query: 3551 EVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCKSC 3372
            E V +V+F+F TDEEVRK S  KIT+P +LD ++RPVPGGLYD A+G +D+ +       
Sbjct: 103  EFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPGN---- 158

Query: 3371 GLNAVQCNGHCGHIELVNPSYNPL-LVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLER 3195
                       G I L+      L  VN   S+         HF A   +V+ YVSQLE 
Sbjct: 159  -----------GRILLIVKKREELQXVNHAASV---------HFIA---QVQKYVSQLEL 195

Query: 3194 IREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGV--SSDGENQDEHEKDAFWDS 3021
            I +GD+ GAK L  +           PE+SDGSH S S    SS  +N   H K   W S
Sbjct: 196  ISKGDVVGAKNLDSISPSESSY----PEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTS 251

Query: 3020 TLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLD 2841
                E+ SV++ FLK + + C NCK  +P++TKPTFGWFH+ G+S  + R+N IR S+L+
Sbjct: 252  LQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLE 311

Query: 2840 VTYSG-DEDRPSSEVLNTSDY--------------SLXXXXXXXXXXXXXXXXXKRDLNR 2706
               S   E++ SSEV N +D               S+                       
Sbjct: 312  RPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERKGAQAPI 371

Query: 2705 ELQEKADLFSGSLLPSEV----------------------------RDILRRLWENEAPL 2610
            E  ++   FSG LLPSEV                            RDI+ RLWENEA L
Sbjct: 372  EFIKQKSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEAEL 431

Query: 2609 CSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGGDSVMEHAHTILLGKVLQ 2430
            CS+I DI ++    SG   G+SMFFLETILVPPI+FRP +KG  SVMEH  T+LLGKVLQ
Sbjct: 432  CSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQ 491

Query: 2429 ANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQKNGPDGICQNLEKKDGL 2250
            ANIALGNAH N++E S+II RWMDLQQSINVL+D KTA  Q Q++   GICQ LEKK+G+
Sbjct: 492  ANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGV 551

Query: 2249 FRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPERVTPWNAGKLRSAVING 2070
            FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+LTYPE+VTPWN  KLR A+ING
Sbjct: 552  FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIING 611

Query: 2069 PDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQSGKIGEHEFEGKIVRRHL 1890
            P+IHPGAT+Y D +S+ +L  NKKMRI++SRKLPSSR VV+Q G+  ++EFEGKIV RHL
Sbjct: 612  PEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHL 671

Query: 1889 QDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANC------------------SS 1764
            QDGDIVLVNRQPTLHKPSIMAH+VRVL GE+TLRMHYANC                  S+
Sbjct: 672  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDSST 731

Query: 1763 YNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMK 1584
            YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QYIVP++GD +RGLIQDHIV+AVL+T K
Sbjct: 732  YNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKK 791

Query: 1583 NTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGK 1404
            +TFLTR +++QLLY SG+ ++G GS  G    KVSV+DSE  ++ +LPA+WKPEPLW+GK
Sbjct: 792  DTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGK 850

Query: 1403 QVITALLNHITRGCAPCTVKNQGKVPKNYFAS-----ASYKNGEEDQDH---------NA 1266
            QVITA+LNHITRG  P T +  GK+P+ YF S      S K  +   D          + 
Sbjct: 851  QVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHG 910

Query: 1265 EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFT 1086
            E+ LLI KNELVRGVIDKAQF KYGLVH VQELYGSN+AGILLS LSRLFT+FLQ HGFT
Sbjct: 911  EYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFT 970

Query: 1085 CGVDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKPGQIGPEELQLEIEKAICSDRE 909
            CGVDDL+I PN+D+ RK +L+  E++GE VHC F+    G+I P +LQ+E+EK I S+ E
Sbjct: 971  CGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGE 1030

Query: 908  SATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQ 729
            +A   LD  MKN+L N LT   S++ K LL KGL+KPFPKNC+S+MTTTGAKGSTVNF Q
Sbjct: 1031 AAITRLDRMMKNEL-NELT---SKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQ 1086

Query: 728  ISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAG 549
            IS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  ARAGGFI+DRFL+GL PQEYYFHCMAG
Sbjct: 1087 ISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAG 1146

Query: 548  REGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSF 369
            REGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYTVRDSDGSIVQF YG+DGVDVH+TSF
Sbjct: 1147 REGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSF 1206

Query: 368  LKNFKALEDNRETIWQKFQNHREFNSYISELP 273
            +  F+AL  N+E + +KF    +FN YI +LP
Sbjct: 1207 ITEFEALAVNQEVVCEKFGQDGKFNGYIQKLP 1238



 Score =  104 bits (259), Expect = 3e-19
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K++ F+ LVKQKY++SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPR
Sbjct: 1264 KQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPR 1323


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 1250 bits (3234), Expect = 0.0
 Identities = 657/1121 (58%), Positives = 804/1121 (71%), Gaps = 41/1121 (3%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A + V +VRF FMT EEVRK S LK+TN NLLD+++RP+PGGLYD+ +GPL+D     CK
Sbjct: 8    ATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED--RTPCK 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCGL  + C GHCGHI+LV+P YNPLL N L ++L + CF+CYHFRA+K EVE  VSQL+
Sbjct: 66   SCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLK 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAF---- 3030
             I  GD+ GAKRL             D + +D S  S     S       H  +A     
Sbjct: 126  LIGNGDIVGAKRL-------------DSDSADASSYSDYNEGSQESGSIVHNSEAVKPKE 172

Query: 3029 WDSTLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSS 2850
            W S  L E+ SVLN FLK +  KC NC   NP ITKP FGW H+ G+   +MR N IR  
Sbjct: 173  WTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGC 232

Query: 2849 RLDVTYSG-------DEDRPSSE-------VLNTSDYSLXXXXXXXXXXXXXXXXXKRDL 2712
            ++  T+S        D D  SS         ++TS+                       +
Sbjct: 233  KMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKA----QV 288

Query: 2711 NRELQEKADLFSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFL 2532
              E  ++ +LFSG LLPSEV+ I + LWENE  LCS I DIQ+Q     G   G+SMFFL
Sbjct: 289  PLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFL 345

Query: 2531 ETILVPPIRFRPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGR-WMDL 2355
            ETILVPPI+FR   KGGDSVMEH  T+LL KVLQANI+LGNA+TN+ + S+ + R WMDL
Sbjct: 346  ETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDL 405

Query: 2354 QQSINVLYDSKTANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLA 2175
            QQS+N+L+DSKTA SQ  ++   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLA
Sbjct: 406  QQSVNLLFDSKTAMSQG-RDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLA 464

Query: 2174 VNEIGIPPHFALKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKM 1995
            VNEIGIPP+FAL+LTYPERVTPWN  KLR A+ING + HPGAT+Y D +S+ RLP ++K 
Sbjct: 465  VNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKA 524

Query: 1994 RIAVSRKLPSSRSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVR 1815
            RI++SRKLPSSR  ++Q GK  ++EFEGKIV RHLQDGD+VLVNRQPTLHKPSIMAH+VR
Sbjct: 525  RISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVR 584

Query: 1814 VLPGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTV 1635
            VL GE+T+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ P+ G+ +
Sbjct: 585  VLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPI 644

Query: 1634 RGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLV 1455
            R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    KV V  SE  +
Sbjct: 645  RALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGM 704

Query: 1454 ESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQD 1275
              I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F +   KN +  ++
Sbjct: 705  LPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSRE 764

Query: 1274 HNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSN 1155
             N                     E  +LI++N+LVRGVIDKAQF  YGLVHTVQELYGSN
Sbjct: 765  ENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSN 824

Query: 1154 SAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKF 978
            +AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E    E H +    
Sbjct: 825  TAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGV 884

Query: 977  K-PGQIGPEELQLEIEKAICSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLK 801
            K   +  P ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L  LL++GL+K
Sbjct: 885  KVNSETAPTELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VLTELLSEGLVK 941

Query: 800  PFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARA 621
               +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD+ ARA
Sbjct: 942  SMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARA 1001

Query: 620  GGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTV 441
            GGFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TV
Sbjct: 1002 GGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTV 1061

Query: 440  RDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQK 318
            RD+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K
Sbjct: 1062 RDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEK 1102



 Score =  101 bits (251), Expect = 3e-18
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K + FL L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1142 KPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1201


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1247 bits (3227), Expect = 0.0
 Identities = 645/1112 (58%), Positives = 813/1112 (73%), Gaps = 17/1112 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A+E V  V F+FMT+EEVRKQSV+K+T P LLD + RPV GGLYD AMG LD+     CK
Sbjct: 8    ASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE--TTLCK 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG     C GHCGHI+LV+P YNPLL   L + L  TCF C+HFRA +  VEN  + LE
Sbjct: 66   SCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLE 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +G++A AK L       +++       +  SH+ ++    +G+ +        W S 
Sbjct: 126  LILDGEIAKAKEL-------EEEWMNSKSRTKSSHSMYTYERKNGQPET-------WTSL 171

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SV+ +FLK ++  C  C   +PKITKPTFGWFH+ G++  + R+NAIR S+   
Sbjct: 172  QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLLPS 2658
              SG E   S E   T++ ++                   D++ E+  + +  SG LLPS
Sbjct: 232  VSSGAEGVSSLEEETTTEATVEDF---------------EDVSPEVFMQKNFSSGHLLPS 276

Query: 2657 EVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGGD 2478
            EV+DIL+RLW+NEA LCS+I DI +Q     G   G SMFFLE++LVPPI+FRP AKGGD
Sbjct: 277  EVKDILKRLWKNEALLCSFISDISQQGH---GNKAGHSMFFLESVLVPPIKFRPPAKGGD 333

Query: 2477 SVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQK 2298
            SVMEH  T+LL KVLQ+NI+LGN H N +EHS+I+  WMDLQQSIN+L+DSK+A    + 
Sbjct: 334  SVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKN 393

Query: 2297 NGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPER 2118
            +   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+LTYPER
Sbjct: 394  DASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPER 453

Query: 2117 VTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRL--PANKKMRIAVSRKLPSSRSVVSQ 1944
            VT WN  KLR+A+INGP+ HPGAT+Y D +++ +L    ++K RI++SRKLPSSR VV  
Sbjct: 454  VTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVD 513

Query: 1943 SGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCS- 1767
             G   ++EFEGKIV RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS 
Sbjct: 514  QG-CDDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSI 572

Query: 1766 SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITM 1587
            +YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY+ PT G+ +R LIQDHI++AVL+T 
Sbjct: 573  TYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTK 632

Query: 1586 KNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTG 1407
            K+TFL   EFSQLLY SG+  +   +       K+  +D +  +  +LPAVWKPEPLWTG
Sbjct: 633  KDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTG 692

Query: 1406 KQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHD---------- 1257
            KQV+TALL+HIT+G  P  V+   K+P+ +F      N    +  + + D          
Sbjct: 693  KQVVTALLDHITQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHTKVDKLKAARLDDD 752

Query: 1256 -LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCG 1080
             LLI+KNELVRGVIDKAQFG YGLVHTVQELYGSN+AG+LLS +SRLFT+FLQ HGFTCG
Sbjct: 753  SLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCG 812

Query: 1079 VDDLIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKPGQ-IGPEELQLEIEKAICSDRES 906
            VDDL+++   D +R+++L+  E +GE+VH  F+K K G+ + P  LQL IEK I  + E+
Sbjct: 813  VDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEA 872

Query: 905  ATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQI 726
            A  +LD KM ++L  R  T  S++LK LL++GLLKP  KNCIS+MTT+GAKG T NFQQI
Sbjct: 873  ALTSLDRKMTSQLNER--TGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQI 930

Query: 725  SAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGR 546
            S++LGQQ+LEGKRVPRMVSGKTLP FPPWD+ +RAGGFI DRFL+GLRPQEYYFHCMAGR
Sbjct: 931  SSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGR 990

Query: 545  EGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFL 366
            EGLVDTAVKTSRSGYLQRCLIKNLESLK+CYD+TVRD+DGS++QF YGEDGVDVHKT+F+
Sbjct: 991  EGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFI 1050

Query: 365  KNFKALEDNRETIWQKFQNH-REFNSYISELP 273
              F+AL  N++ +++   +   ++N +I+ELP
Sbjct: 1051 TKFEALAANQDMLYENSHHQLGKYNVFINELP 1082



 Score = 90.9 bits (224), Expect = 4e-15
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            F+ L++ KYL+SLA+ GEPVGV+AAQS+GEPSTQMTLNTFH  GRGEMNVTLGI R
Sbjct: 1110 FIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILR 1165


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1246 bits (3224), Expect = 0.0
 Identities = 656/1120 (58%), Positives = 802/1120 (71%), Gaps = 40/1120 (3%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A + V +VRF FMT EEVRK S LK+TN NLLD+++RP+PGGLYD+ +GPL+D     CK
Sbjct: 8    ATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED--RTPCK 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCGL  + C GHCGHI+LV+P YNPLL N L ++L + CF+CYHFRA+K EVE  VSQL+
Sbjct: 66   SCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLK 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAF---- 3030
             I  GD+ GAKRL             D + +D S  S     S       H  +A     
Sbjct: 126  LIGNGDIVGAKRL-------------DSDSADASSYSDYNEGSQESGSIVHNSEAVKPKE 172

Query: 3029 WDSTLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSS 2850
            W S  L E+ SVLN FLK +  KC NC   NP ITKP FGW H+ G+   +MR N IR  
Sbjct: 173  WTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGC 232

Query: 2849 RLDVTYSG-------DEDRPSSE-------VLNTSDYSLXXXXXXXXXXXXXXXXXKRDL 2712
            ++  T+S        D D  SS         ++TS+                       +
Sbjct: 233  KMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKA----QV 288

Query: 2711 NRELQEKADLFSGSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFL 2532
              E  ++ +LFSG LLPSEV+ I + LWENE  LCS I DIQ+Q     G   G+SMFFL
Sbjct: 289  PLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFL 345

Query: 2531 ETILVPPIRFRPSAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGR-WMDL 2355
            ETILVPPI+FR   KGGDSVMEH  T+LL KVLQANI+LGNA+TN+ + S+ + R WMDL
Sbjct: 346  ETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDL 405

Query: 2354 QQSINVLYDSKTANSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLA 2175
            QQS+N+L+DSKTA SQ  ++   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLA
Sbjct: 406  QQSVNLLFDSKTAMSQG-RDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLA 464

Query: 2174 VNEIGIPPHFALKLTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKM 1995
            VNEIGIPP+FAL+LTYPERVTPWN  KLR A+ING + HPGAT+Y D +S+ RLP ++K 
Sbjct: 465  VNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKA 524

Query: 1994 RIAVSRKLPSSRSVVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVR 1815
            RI++SRKLPSSR  ++Q GK  ++EFEGKIV RHLQDGD+VLVNRQPTLHKPSIMAH+VR
Sbjct: 525  RISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVR 584

Query: 1814 VLPGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTV 1635
            VL GE+T+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ P+ G+ +
Sbjct: 585  VLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPI 644

Query: 1634 RGLIQDHIVAAVLITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLV 1455
            R LIQDHIV+AVL+T ++TFL+R EF+QLLY SGV +    S  G    KV V  SE  +
Sbjct: 645  RALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGM 704

Query: 1454 ESILPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQD 1275
              I+PA+ KP+PLWTGKQVI+++L+HITRG  P TV    K+P+++F +   KN +  ++
Sbjct: 705  LPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSRE 764

Query: 1274 HNA--------------------EHDLLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSN 1155
             N                     E  +LI++N+LVRGVIDKAQF  YGLVHTVQELYGSN
Sbjct: 765  ENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSN 824

Query: 1154 SAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKF 978
            +AGILLS  SRLFT+FLQ HGFTCGVDDL+I+ + D++RK++LE  E    E H +    
Sbjct: 825  TAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGV 884

Query: 977  KPGQIGPEELQLEIEKAICSDRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKP 798
            K       ELQLEIE+ I  D E+A   LD KM + L N  +++G  +L  LL++GL+K 
Sbjct: 885  KVN--SETELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VLTELLSEGLVKS 939

Query: 797  FPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAG 618
              +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD+ ARAG
Sbjct: 940  MGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAG 999

Query: 617  GFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVR 438
            GFI+DRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TVR
Sbjct: 1000 GFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVR 1059

Query: 437  DSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDNRETIWQK 318
            D+DGSIVQF YGEDG+DVH+TSF+  F+AL  N++ + +K
Sbjct: 1060 DADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEK 1099



 Score =  101 bits (251), Expect = 3e-18
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K + FL L+K K+L+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1139 KPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1198


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1243 bits (3215), Expect = 0.0
 Identities = 646/1109 (58%), Positives = 815/1109 (73%), Gaps = 14/1109 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A+E V  V F+FMT+EEVRKQSV+K+T P LLD + RPV GGLYD AMG LD+     CK
Sbjct: 14   ASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE--TTLCK 71

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG     C GHCGHI+LV+P YNPLL   L + L  TCF C+HFRA +  VEN  + LE
Sbjct: 72   SCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLE 131

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +G++A AK L       +++       +  SH+ ++    +G+ +        W S 
Sbjct: 132  LILDGEIAKAKEL-------EEEWMNSKSRTKSSHSMYTYERKNGQPET-------WTSL 177

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SV+ +FLK ++  C  C   +PKITKPTFGWFH+ G++  + R+NAIR S+   
Sbjct: 178  QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 237

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLLPS 2658
              SG E   S E   T++ ++                   D++ E+  + +  SG LLPS
Sbjct: 238  VSSGAEGVSSLEEETTTEATVEDF---------------EDVSPEVFMQKNFSSGHLLPS 282

Query: 2657 EVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGGD 2478
            EV+DIL+RLW+NEA LCS+I DI +Q     G   G SMFFLE++LVPPI+FRP AKGGD
Sbjct: 283  EVKDILKRLWKNEALLCSFISDISQQGH---GNKAGHSMFFLESVLVPPIKFRPPAKGGD 339

Query: 2477 SVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQK 2298
            SVMEH  T+LL KVLQ+NI+LGN H N +EHS+I+  WMDLQQSIN+L+DSK+A    + 
Sbjct: 340  SVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKN 399

Query: 2297 NGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPER 2118
            +   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+LTYPER
Sbjct: 400  DASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPER 459

Query: 2117 VTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRL--PANKKMRIAVSRKLPSSRSVVSQ 1944
            VT WN  KLR+A+INGP+ HPGAT+Y D +++ +L    ++K RI++SRKLPSSR VV  
Sbjct: 460  VTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVD 519

Query: 1943 SGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCS- 1767
             G   ++EFEGKIV RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS 
Sbjct: 520  QG-CDDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSI 578

Query: 1766 SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITM 1587
            +YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY+ PT G+ +R LIQDHI++AVL+T 
Sbjct: 579  TYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTK 638

Query: 1586 KNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTG 1407
            K+TFL   EFSQLLY SG+  +   +       K+  +D +  +  +LPAVWKPEPLWTG
Sbjct: 639  KDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTG 698

Query: 1406 KQVITALLNHITRGCAPCTVKNQGKVPKNYFA-----SASYKNGEEDQDHNAEHD---LL 1251
            KQV+TALL+HIT+G  P  V+   K+P+ +       S   ++ + D+   A  D   LL
Sbjct: 699  KQVVTALLDHITQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAARLDDDSLL 758

Query: 1250 IWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDD 1071
            I+KNELVRGVIDKAQFG YGLVHTVQELYGSN+AG+LLS +SRLFT+FLQ HGFTCGVDD
Sbjct: 759  IFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDD 818

Query: 1070 LIILPNFDLQRKEKLE-GEDVGEEVHCDFVKFKPGQ-IGPEELQLEIEKAICSDRESATA 897
            L+++   D +R+++L+  E +GE+VH  F+K K G+ + P  LQL IEK I  + E+A  
Sbjct: 819  LLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALT 878

Query: 896  TLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAY 717
            +LD KM ++L  R  T  S++LK LL++GLLKP  KNCIS+MTT+GAKG T NFQQIS++
Sbjct: 879  SLDRKMTSQLNER--TGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSH 936

Query: 716  LGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGL 537
            LGQQ+LEGKRVPRMVSGKTLP FPPWD+ +RAGGFI DRFL+GLRPQEYYFHCMAGREGL
Sbjct: 937  LGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGL 996

Query: 536  VDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNF 357
            VDTAVKTSRSGYLQRCLIKNLESLK+CYD+TVRD+DGS++QF YGEDGVDVHKT+F+  F
Sbjct: 997  VDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKF 1056

Query: 356  KALEDNRETIWQKFQNH-REFNSYISELP 273
            +AL  N++ +++   +   ++N +I+ELP
Sbjct: 1057 EALAANQDMLYENSHHQLGKYNVFINELP 1085



 Score = 96.3 bits (238), Expect = 1e-16
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            F+ L++ KYL+SLA+ GEPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPR
Sbjct: 1113 FIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPR 1168


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 652/1110 (58%), Positives = 798/1110 (71%), Gaps = 15/1110 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A   V +V F+F+TD+E+R+ S +KIT+P L+D L  PVP GLYD+A+GP DD S   CK
Sbjct: 8    ATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKS--LCK 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG  +  C GH GHIELV+P YNPL+ N L++IL +TCF C+HFRA  +EV+   SQLE
Sbjct: 66   SCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLE 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +GD+  AKRL  +    K     +P+ES      H G   + +     +    W S 
Sbjct: 126  LIMKGDIIRAKRLESIIP-GKSVDSFNPDES-----IHPGDGDESQCYSAEQLGENWTSL 179

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SVL + L K+ KKC  C   NPKI+KPTFGWFH+  +S  E R++ IRS   + 
Sbjct: 180  QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESET 239

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRD------LNRELQEKADLFS 2676
            T                D SL                 KRD      L+ +L E+  L S
Sbjct: 240  T--------------NDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYKLAEQNKL-S 284

Query: 2675 GSLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRP 2496
            GSLLPS+V+ IL  LWENEA LCSYI DIQ Q     G   G SMFFLE I VPPI+FRP
Sbjct: 285  GSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPPIKFRP 341

Query: 2495 SAKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTA 2316
              KGGD+VMEH  T+LL KVLQ NI+LG+AH N ++ S+++ RWMDLQQS+N+L+D+KTA
Sbjct: 342  PTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTA 401

Query: 2315 NSQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALK 2136
            + +  ++   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+
Sbjct: 402  SGK--RDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALR 459

Query: 2135 LTYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRS 1956
            L+YPERVTPWN  KLR+A++NGP+ HPGAT+Y D VS  +LP   K+    SRKLP+SR 
Sbjct: 460  LSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRG 519

Query: 1955 VVSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYA 1776
            V+   GKI +HEFEGK+V RHL+DGD+VLVNRQPTLHKPSIMAHIVRVL GE+T+RMHYA
Sbjct: 520  VILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYA 579

Query: 1775 NCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVL 1596
            NCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R LIQDHIV+A L
Sbjct: 580  NCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAAL 639

Query: 1595 ITMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPL 1416
            +T K+TFL+  EF+QLLY SGV  AG GS  G    KV + +SE  +    PA+WKPEPL
Sbjct: 640  LTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPL 699

Query: 1415 WTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHD------L 1254
            WTGKQVI+ALL +ITRG  P T +   K+P N+F +   K     +D + + D      L
Sbjct: 700  WTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKL 759

Query: 1253 LIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVD 1074
            LI+KN+LVRGV+DKAQFG YG++HTVQELYGSN AG LLSALSRLFT FLQ HGFTCGVD
Sbjct: 760  LIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVD 819

Query: 1073 DLIILPNFDLQRKEKLEG-EDVGEEVHCDFVKFK-PGQIGPEELQLEIEKAICSDRESAT 900
            DL++    D++R  +L+  E +G+ VH +F+  K    I P  LQL IEK I S+ E+A 
Sbjct: 820  DLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAA- 878

Query: 899  ATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISA 720
             TLD KM + L +R +   S ILK LL++G+LKP  KNCIS+MTT+GAKGS VNFQQIS+
Sbjct: 879  LTLDRKMTSNLNSRTS---SGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISS 935

Query: 719  YLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREG 540
            +LGQQELEGKRVPRMVSGKTLP FPPWD + RAGGFI DRFL+ L PQEYYFHCMAGREG
Sbjct: 936  HLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREG 995

Query: 539  LVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKN 360
            LVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+DGSI+QF+YGEDGVDVH+TSF+  
Sbjct: 996  LVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITE 1055

Query: 359  FKALEDNRETIWQKFQNHREFNS-YISELP 273
            F AL  N+E ++  +    + +S YI++LP
Sbjct: 1056 FGALSTNKELVFSNYCRQLDRSSPYINKLP 1085



 Score = 95.1 bits (235), Expect = 2e-16
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            ++  FL L++ KY++ LA+ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1105 EQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPR 1164


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1214 bits (3140), Expect = 0.0
 Identities = 646/1106 (58%), Positives = 779/1106 (70%), Gaps = 15/1106 (1%)
 Frame = -3

Query: 3545 VSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCKSCGL 3366
            V +V F+F+T +E+ + S +KITNP LL+ L  PV GGLYD A+GPLDD S   CKSCG 
Sbjct: 12   VKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDDKS--LCKSCGQ 69

Query: 3365 NAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLERIRE 3186
             +  C GH GHIELV+P YNPL+ N L+SIL +TCF C+HF A ++EVE   SQ E I +
Sbjct: 70   GSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMRTSQFELIMK 129

Query: 3185 GDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDSTLLTE 3006
            GD+  AK L          I +D     G      GV   GEN         W S   +E
Sbjct: 130  GDIIRAKSLD--------SIISDESNHSGDGDESQGVEQLGEN---------WSSLQFSE 172

Query: 3005 SKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDVTYSG 2826
            + SVL +FL ++ KKC NC  VNP+I+KPTFGWFH+  +S  E R+N +R+         
Sbjct: 173  AMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALE------- 225

Query: 2825 DEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADL-----FSGSLLP 2661
                  SE +N  D SL                 KRD  ++ +  + L      SGSLLP
Sbjct: 226  ------SETIN-DDMSLGGGETTEEEDITSTGTAKRDKRKKGKLSSKLAAQNKLSGSLLP 278

Query: 2660 SEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGG 2481
            S+V+ IL  LWENEA LCSYI DIQ Q     G   G SMFFLE I VPPI+FRP  KGG
Sbjct: 279  SQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTKGG 335

Query: 2480 DSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQ 2301
            D VMEH  T+LL KVLQ NI+LG+AH N  + S+++ RWMDLQQS+N+L+D+KT+    Q
Sbjct: 336  DDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNLLFDNKTSG---Q 392

Query: 2300 KNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPE 2121
                 GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+L+YPE
Sbjct: 393  GEVAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPE 452

Query: 2120 RVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQS 1941
            RVTPWN   LR+A++NGP  HPGAT+Y D  ++ +LP N K+   +SRKLPSSR V+   
Sbjct: 453  RVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRKLPSSRGVILDH 512

Query: 1940 GKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSSY 1761
            GKI + EFEGKIV RHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS+Y
Sbjct: 513  GKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTY 572

Query: 1760 NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMKN 1581
            NADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R LIQDHIV+A L+T K+
Sbjct: 573  NADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKD 632

Query: 1580 TFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGKQ 1401
            TF+T   F QLLY SGV   G GS  G    KV + +SE  +    PA+WKPEPLWTGKQ
Sbjct: 633  TFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAIWKPEPLWTGKQ 692

Query: 1400 VITALLNHITRGCAPCTVKNQGKVPKNYFAS--ASYKNGEEDQDHNA-----EHDLLIWK 1242
            VI+ALL +ITR   P TV+   K+P N+F +     K    D+  N      E  LLI+K
Sbjct: 693  VISALLYYITRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNKVEPDDEDKLLIYK 752

Query: 1241 NELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLII 1062
            N+LVRGV+DKAQFG YG++HTVQELYGS  AG LLSALSRLFT FLQ HGFTCGVDDL+I
Sbjct: 753  NDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQMHGFTCGVDDLMI 812

Query: 1061 LPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPGQ-IGPEELQLEIEKAICSDRESATATLD 888
                D++R ++L   E++G+ VH +F+       I P  LQL IEK I S+ E+A   LD
Sbjct: 813  TEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKKIRSNGEAALTYLD 872

Query: 887  MKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQ 708
             KM + L +R +   S ILK LL+ G+LKP  KNCIS+MTT+GAKGS VNFQQIS++LGQ
Sbjct: 873  RKMTSNLNSRTS---SGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQ 929

Query: 707  QELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDT 528
            QELEGKRVPRMVSGKTLP F PWD + RAGGFI DRFL+GL PQEYYFHCMAGREGLVDT
Sbjct: 930  QELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDT 989

Query: 527  AVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKAL 348
            AVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+DGSI+QF+YGEDGVDVH TSF+  F+AL
Sbjct: 990  AVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEAL 1049

Query: 347  EDNRETIWQKFQNHREFNS-YISELP 273
              N+E ++       + +S YI++LP
Sbjct: 1050 STNKELVYGNCCRQLDRSSPYINKLP 1075



 Score = 92.8 bits (229), Expect = 1e-15
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            K   FL+L++ KY++ LA+ GE VGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1099 KRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPR 1158


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 1214 bits (3140), Expect = 0.0
 Identities = 628/1107 (56%), Positives = 796/1107 (71%), Gaps = 12/1107 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A   V +V F+F+TDEE+ K S +KITNP LLD L  PV GGLYD A+GP  + S   C+
Sbjct: 8    ATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHEKS--PCQ 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG N+  C GH GHIELV+P+YNPL+ + L+++L +TCF C+HF+A ++EVE   +QLE
Sbjct: 66   SCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELRANQLE 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +G++A AK L  +       +    +  DG  +  S     GEN         W S 
Sbjct: 126  LIMKGNIAKAKNLDEIN------LDESADLCDGDDSQCSSAEQLGEN---------WTSL 170

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SVL +FLKK  +KC NC  +NPKIT PTFGWFHV  +S  + R+N I       
Sbjct: 171  QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVI------- 223

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEK---ADLFSGSL 2667
              SG++   +SE+++  D SL                   +  R  +EK   +   +GSL
Sbjct: 224  --SGNDVSLASEIIH-DDISLGNGDTTDVEDITSGDIANSNAKRHNKEKQISSHTLAGSL 280

Query: 2666 LPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAK 2487
            LPS+V+ IL  LWEN+A LC YI DIQ       G   G SMFFLE I VPPI+FRP  K
Sbjct: 281  LPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYVPPIKFRPPTK 337

Query: 2486 GGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQ 2307
            G D V EHA T+LL +VL++NI+LG AH N ++ S ++ RWMDLQ+S+N+L+D+KTA+ +
Sbjct: 338  GDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGE 397

Query: 2306 SQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTY 2127
            SQK+   GICQ LEKK+G+FRQ MMGKRVN+ACRSVISPDPYLAVNEIGIPP+FAL+LTY
Sbjct: 398  SQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTY 457

Query: 2126 PERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVS 1947
            PERVTPWN  +LR+A++NGP+ HPGAT Y D  S+ +LP +++ R   SR+L SSR V+ 
Sbjct: 458  PERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRRLQSSRGVIM 517

Query: 1946 QSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCS 1767
             +GKI ++EFEGK+V RHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS
Sbjct: 518  HNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCS 577

Query: 1766 SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITM 1587
            +YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R LIQDHIV+A L+T 
Sbjct: 578  TYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTK 637

Query: 1586 KNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTG 1407
            K+TFL+  EF+QLLY SGV   G G  PG    K+ + +S+  +    PA++KPEPLWTG
Sbjct: 638  KDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPEPLWTG 697

Query: 1406 KQVITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHD------LLIW 1245
            KQVI+ALL +IT+G  P TV+   K+P ++F +   +  +  +D + + D      LLI+
Sbjct: 698  KQVISALLYYITKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPDEDKLLIY 757

Query: 1244 KNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLI 1065
            KN+LVRGV+DKAQFG YG+VHTVQE YGSN+AG LLSALSRLFT FLQ HGFTCGVDDL+
Sbjct: 758  KNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQMHGFTCGVDDLL 817

Query: 1064 ILPNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG-QIGPEELQLEIEKAICSDRESATATL 891
            +    D +R  +LE  E++G+ VH +F+    G  I P  +QL +EK I S+ E+A   L
Sbjct: 818  LTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNGEAAITYL 877

Query: 890  DMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLG 711
            D KM + L +R +   S +LK LL++G+LKP  KN IS+MTT+GAKGS VNFQQIS++LG
Sbjct: 878  DRKMISNLNSRTS---SGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVNFQQISSHLG 934

Query: 710  QQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVD 531
            QQELEGKRVPRMVSGKTLP F  WD + RAGGFI DRFL+ LRPQEYYFHCMAGREGLVD
Sbjct: 935  QQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVD 994

Query: 530  TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKA 351
            TAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+DGSI+QF+YGEDGVDVH+TSF+  F+A
Sbjct: 995  TAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEA 1054

Query: 350  LEDNRETIWQK-FQNHREFNSYISELP 273
            L  N+E ++    +   E + YI++LP
Sbjct: 1055 LSTNKELVYSNCCRELDESSPYINKLP 1081



 Score = 97.4 bits (241), Expect = 4e-17
 Identities = 45/56 (80%), Positives = 54/56 (96%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            FL+L++ KY++SLA+ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1110 FLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPR 1165


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 1211 bits (3134), Expect = 0.0
 Identities = 630/1105 (57%), Positives = 796/1105 (72%), Gaps = 10/1105 (0%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A   V +V F+F+TDEE+ K S +KITNP LLD L  PV GGLYD A+GP  + S   C+
Sbjct: 8    ATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHEKS--PCQ 65

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG N+  C GH GHIELV+P YNPL+ + L+++L +TCF C+HF+A + EVE   +QLE
Sbjct: 66   SCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELRANQLE 125

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +G++A AK L  +       +    + SDG+ +  S     GEN         W S 
Sbjct: 126  LIMKGNIAKAKNLDAIN------LDESADLSDGNDSQCSSDEQLGEN---------WTSL 170

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SVL +FLKK  +KC NC  +NPKITKPTFGWFHV  +S  + R+N I       
Sbjct: 171  QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVI------- 223

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQ-EKADLFSGSLLP 2661
              SG +   +SE+++  D SL                   +  R+ +  + +  SGSLLP
Sbjct: 224  --SGIDASLASEIIH-DDISLGNGDTTDVEDITSGDTANSNAKRQNKLARHNKLSGSLLP 280

Query: 2660 SEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGG 2481
            S+V+ IL  LWENEA LC YI DIQ Q     G   G SMFFL+ I VPPI+FRP  KG 
Sbjct: 281  SQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPPIKFRPPTKGD 337

Query: 2480 DSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQ 2301
            D V EHA T+LL +VL++NI+LG AH N ++ S ++ RWMDLQ+S+N+L+D+KTA+ Q  
Sbjct: 338  DKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGQ-- 395

Query: 2300 KNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPE 2121
            K+   GICQ LEKK+G+FRQ MMGKRVN+ACRSVISPDPYLAVNEIGIPP+FAL+LTYPE
Sbjct: 396  KDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPE 455

Query: 2120 RVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQS 1941
            RVTPWN  +LR+A++NGP+ HPGAT Y D  S+ +LP +++ R   SRKL SSR V+  +
Sbjct: 456  RVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQSSRGVIMHN 515

Query: 1940 GKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSSY 1761
            GKI ++EFEGK+V RHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS+Y
Sbjct: 516  GKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTY 575

Query: 1760 NADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMKN 1581
            NADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R LIQDHIV+A L+T K+
Sbjct: 576  NADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKD 635

Query: 1580 TFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGKQ 1401
            TFL+  EF+QLLY SGV   G G  PG    K+ + +S+  +    PA++KPEPLWTGKQ
Sbjct: 636  TFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPEPLWTGKQ 695

Query: 1400 VITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHD------LLIWKN 1239
            VI+ALL +IT+G  P TV+   K+P ++F +   +  +  +D + + D      LLI++N
Sbjct: 696  VISALLYYITKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPDEDKLLIYRN 755

Query: 1238 ELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIIL 1059
            +LVRGV+DKAQFG YG+VHTVQE YGSN+AGILLSALSRLFT FLQ HGFTCGVDDL++ 
Sbjct: 756  DLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFTCGVDDLLLT 815

Query: 1058 PNFDLQRKEKLEG-EDVGEEVHCDFVKFKPG-QIGPEELQLEIEKAICSDRESATATLDM 885
               D +R  +LE  E++G+ VH +F+    G  I P  +QL +EK I S+ E+A   LD 
Sbjct: 816  EGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNGEAAITYLDR 875

Query: 884  KMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQ 705
            KM + L +R +T    +LK LL++G+LKP  KN IS+MTT+GAKGS VNFQQIS++LGQQ
Sbjct: 876  KMISNLNSRTST---GVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQ 932

Query: 704  ELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTA 525
            ELEGKRVPRMVSGKTLP F  WD + RAGGFI DRFL+ LRPQEYYFHCMAGREGLVDTA
Sbjct: 933  ELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTA 992

Query: 524  VKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALE 345
            VKTSRSGYLQRCL+KNLE LKVCYD+TVRD+DGSI+QF+YGEDGVDVH+TSF+  F+AL 
Sbjct: 993  VKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEALS 1052

Query: 344  DNRETIWQKFQNHREFNS-YISELP 273
             N+E ++       + +S YI++LP
Sbjct: 1053 TNKELVYSNCCRELDKSSPYINKLP 1077



 Score = 96.7 bits (239), Expect = 7e-17
 Identities = 45/56 (80%), Positives = 53/56 (94%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            FL L++ KY++SLA+ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1106 FLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPR 1161


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 1184 bits (3063), Expect = 0.0
 Identities = 625/1103 (56%), Positives = 795/1103 (72%), Gaps = 8/1103 (0%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A   + SV F+F+T+EE+ K S +K+T+ NL + +  PV GGLYD A GPL D + + C+
Sbjct: 8    ATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD-NRSNCE 66

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG++   C+GH GHIELV+P YNPL+   L  ILN+TCF C++FRA ++EV+   SQLE
Sbjct: 67   SCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKRRASQLE 126

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWDST 3018
             I +G+++ AK LG +    K     D  + D   +  SG    GE+         W S 
Sbjct: 127  LILKGNISKAKSLGEI----KLNETIDSVDDDDDDSQWSGAEQLGES---------WTSL 173

Query: 3017 LLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRLDV 2838
              +E+ SV+ EFL K  KKC NC  ++PKITKPTFG F+V  +S  + R+N I S++   
Sbjct: 174  QFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAKAAD 233

Query: 2837 TYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLLPS 2658
              + +ED  S    N++  +                   + L+ +L E++ L SGSLLPS
Sbjct: 234  VQADEEDITSGGAGNSNGNN-------------------QILSIKLVEQSSL-SGSLLPS 273

Query: 2657 EVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKGGD 2478
            +V+++++ LW+NE+ LCS+I DIQ Q     G   G SMFFLE I VPPI+FRP  K GD
Sbjct: 274  QVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPLKAGD 330

Query: 2477 SVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQSQK 2298
            +V EH  T+LL KVL++NI+L +AH   ++   I+ RW DLQ S+N+L+D+KT+  +SQK
Sbjct: 331  NVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLLFDNKTS-LRSQK 389

Query: 2297 NGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYPER 2118
            +   GICQ L+KK+G+FRQ MMGKRVN+ACRSVISPDPYLAVNEIGIPP+FAL+LTYPER
Sbjct: 390  DA-SGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPER 448

Query: 2117 VTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQSG 1938
            VTPWN+ KL  A++NGPD HPGA  Y D  S+ RL  +K +R + SR+L SSR V+   G
Sbjct: 449  VTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRLQSSRGVIMHHG 508

Query: 1937 KIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSSYN 1758
            KI EHEFEGK+V RHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYANCS+YN
Sbjct: 509  KIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYN 568

Query: 1757 ADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMKNT 1578
            ADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R LIQDHIV+A L+T K+T
Sbjct: 569  ADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDT 628

Query: 1577 FLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGKQV 1398
            FL+  EF+QLLY SGV   G GS       KV + +SE  +    PA++KPEPLWTGKQV
Sbjct: 629  FLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIFKPEPLWTGKQV 688

Query: 1397 ITALLNHITRGCAPCTVKNQGKVPKNYFASASYKNGEEDQDHNAEHD-----LLIWKNEL 1233
            I+ALL +IT+G  P TV+   K+P ++F + + +  +  +D + + D     LLI++N+L
Sbjct: 689  ISALLCYITKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKDELEDKLLIYRNDL 748

Query: 1232 VRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPN 1053
            VRGV+DKAQFG YG+VHTVQE YGSN+AGILLSALSRLFT FLQ HGFTCGVDDL+I   
Sbjct: 749  VRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFTCGVDDLLIKVG 808

Query: 1052 FDLQRKEKLEG-EDVGEEVHCDFVKFKPGQ-IGPEELQLEIEKAICSDRESATATLDMKM 879
             D +R  +LE  E++G+ VH +F+     + I P  +QL +EK I S+ E+A   LD KM
Sbjct: 809  KDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRSNGEAAITYLDRKM 868

Query: 878  KNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQEL 699
             + L +R +   S +LK LL+KG LKP  KN IS+MTT+GAKGS VNFQQIS++LGQQEL
Sbjct: 869  ISNLNSRTS---SGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQEL 925

Query: 698  EGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVK 519
            EGKRVPRMVSGKTLP FP WD + RAGGFI DRFL+ LRPQEYYFHCMAGREGLVDTAVK
Sbjct: 926  EGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVK 985

Query: 518  TSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALEDN 339
            TSRSGYLQRCL+KNLESLKVCYD+TVRDSDGSI+QF+YGEDGVDVH+TSF+  F+AL  N
Sbjct: 986  TSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSFINKFEALSIN 1045

Query: 338  RETIWQKFQNHREFNS-YISELP 273
            +E I+       + +S YI++LP
Sbjct: 1046 KELIYSNCCRQLDRSSPYINKLP 1068



 Score = 99.4 bits (246), Expect = 1e-17
 Identities = 46/60 (76%), Positives = 56/60 (93%)
 Frame = -2

Query: 180  KERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            KE  FL++++ KY++SLA+ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1093 KEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPR 1152


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score = 1169 bits (3025), Expect = 0.0
 Identities = 632/1117 (56%), Positives = 768/1117 (68%), Gaps = 80/1117 (7%)
 Frame = -3

Query: 3383 CKSCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQ 3204
            CKSCG   + C GHCGHI+LV+P YNPLL N L SIL +TCF CYHFR    EV+  VSQ
Sbjct: 6    CKSCGQRQLNCPGHCGHIDLVSPIYNPLLFNILYSILKRTCFSCYHFRRNPVEVKKCVSQ 65

Query: 3203 LERIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDGENQDEHEKDAFWD 3024
            LE I +GD+A AK L                 S+ SH    G     +   +        
Sbjct: 66   LELILKGDVARAKDLN------------SRPSSESSHLKDYGYRGSKDRSAKPSTQPKLT 113

Query: 3023 STLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRL 2844
            S  L+E+ SVLN FLK    KC NC+     IT+P FGW ++  IS    R+N IR+S+L
Sbjct: 114  SLQLSEAMSVLNNFLKPNHTKCRNCEAHRLTITQPVFGWLNMERISGARARANVIRNSKL 173

Query: 2843 DVTYSGDEDRPSSEVLN--TSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGS 2670
            +  +S  E  P  E++N  TS  S                   + + RE  ++ + FSG 
Sbjct: 174  EGPFSDGESLPEEEIINDVTSPDSDADTDTPATSTKSHRSKGGK-VPREYLKQTETFSGG 232

Query: 2669 -LLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPS 2493
             +LPS+V++++R LWENE  LC+YI DIQ Q     G     SMFFLETILVPPI+FRP 
Sbjct: 233  PMLPSDVKEMIRLLWENEIELCTYITDIQHQGI---GNKADHSMFFLETILVPPIKFRPP 289

Query: 2492 AKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTAN 2313
            +KGGDSVMEH HT+LL KVLQANI LGNAH N  E+++I+ RWMDLQQS+NV++DSKT  
Sbjct: 290  SKGGDSVMEHPHTVLLNKVLQANIELGNAHVNKLEYTKIVRRWMDLQQSVNVMFDSKT-- 347

Query: 2312 SQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKL 2133
            S  Q+N   GICQ LEKK+G+FRQ MMGKRVNFACRSVISPDPYLAVNEIGIPP+FAL+L
Sbjct: 348  STGQRNVAPGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 407

Query: 2132 TYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSV 1953
            TYPERVTPWN  KLR A+INGP+ HPGAT+Y D +S+ +LP N+K RI+ SRKLPSSR V
Sbjct: 408  TYPERVTPWNVVKLRDAIINGPETHPGATHYVDKLSTVKLPLNRKARISASRKLPSSRGV 467

Query: 1952 VSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYAN 1773
            V Q+GK  ++E EGKIV RHLQDGDIVLVNRQPTLHKPSIMAH+VRVL GE+T+RMHYAN
Sbjct: 468  VMQNGKTYDYESEGKIVHRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYAN 527

Query: 1772 CSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLI 1593
            CS+YNADFDGDE+NVH PQDEISRAE YNI+NAN QY+ PT G+ +R LIQDHI++AVL+
Sbjct: 528  CSTYNADFDGDEMNVHLPQDEISRAEGYNILNANNQYVKPTSGEPIRALIQDHIISAVLL 587

Query: 1592 TMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLW 1413
            T K+TFL   EF+ LLY +G+  +G G+       KV V D E  ++S+LPA+WKPEPLW
Sbjct: 588  TKKDTFLRWDEFNHLLYSTGLSNSGSGASSRKFGNKVFVSDFEAELKSLLPAIWKPEPLW 647

Query: 1412 TGKQVITALLNHITRGCAPCTVKNQGKVPKNYFAS------ASYKNG-EEDQD------- 1275
            TGKQVITALLN+ITRG    TV+  GK+P+++F S      +S KN  ++DQD       
Sbjct: 648  TGKQVITALLNYITRGFQAFTVEKGGKIPRDFFRSRTVEDESSRKNAHKDDQDEEEKPSR 707

Query: 1274 HNAEH----------------------------DLLIWKNELVRGVIDKAQFGKYGLVHT 1179
              A+H                             L I++N  VRGVIDKAQFG YGL+HT
Sbjct: 708  RKADHIESKRKKEPITGRKIDKNELKMKEELDDKLFIYRNNFVRGVIDKAQFGDYGLIHT 767

Query: 1178 VQELYGSNSAGILLSALSRLFTIFLQFHGFTCGVDDLIILPNFDLQRKEKLEG-EDVGEE 1002
            V ELYGSN+AG+LLS+LSRLFT+FLQ HGFTCGVDDL+I+ + D +R   LE  ED+GEE
Sbjct: 768  VHELYGSNTAGLLLSSLSRLFTVFLQMHGFTCGVDDLLIVKSKDKERGRVLEKCEDIGEE 827

Query: 1001 VHCDFVKFKPGQ-IGPEELQLEIEKAICSDRESATATLDMKMKNKLTNRLTTEGSQILKH 825
            VH +FV  K  + I P  LQL+IEK +  + E+A A+LD KM +++ +   T  S+ LK 
Sbjct: 828  VHREFVGVKDDENIDPFTLQLKIEKTVRINGEAALASLDRKMISQVND--ITSKSEELKG 885

Query: 824  LLTKGLLKPFPKNCISVMTTTGAKGST--------------------------------V 741
            LL+K LLKP  KNCIS+MTT+GAKG                                  V
Sbjct: 886  LLSKALLKPPIKNCISLMTTSGAKGGAEYSNTPPQAGVKMSFRASLLMKLSNCALGKPLV 945

Query: 740  NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFH 561
            NFQQIS++LGQQELEGKRVPRM SGKTLP FP WD+ ARAGG + D FLSGLRPQE+YFH
Sbjct: 946  NFQQISSHLGQQELEGKRVPRMASGKTLPCFPAWDWRARAGGLVIDCFLSGLRPQEFYFH 1005

Query: 560  CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVH 381
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKV YD+TVRD+DGSIVQF YGEDGVDVH
Sbjct: 1006 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVSYDHTVRDADGSIVQFCYGEDGVDVH 1065

Query: 380  KTSFLKNFKALEDNRETIWQKFQNHREFNS-YISELP 273
            +TSFL NF+AL  N++ I++K     + +S YI +LP
Sbjct: 1066 QTSFLANFEALAANKQMIYKKCCRGIDKSSPYIKDLP 1102



 Score =  100 bits (249), Expect = 5e-18
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = -2

Query: 168  FLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1
            FL+L++ KYL+SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1130 FLKLMEHKYLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1185


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 1164 bits (3012), Expect = 0.0
 Identities = 624/1117 (55%), Positives = 780/1117 (69%), Gaps = 22/1117 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A++VV SVRF+FMT+++VRK S LK+T+P LLD +  P PGGLYD  +GP++D     C 
Sbjct: 23   ASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIED--KKACD 80

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            +CG   + C GHCGHIELV P Y+PLL N L + L +TCF C+HF AK  +VE  VSQL+
Sbjct: 81   TCGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLK 140

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHAS-HSGVSSDGEN--QDEHEKDAFW 3027
             I +GD+  AK+L              P +SD S  S  SGV++D     +D   +D  W
Sbjct: 141  LIIKGDIVSAKQLE----------SNTPTKSDSSDVSCESGVTTDSSEGCEDSDMEDQRW 190

Query: 3026 DSTLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSR 2847
             S    E  +V+  F++   K C  CK VNP++ KP FGW  +  +  +++ +N IR  +
Sbjct: 191  TSLQFAEVTAVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLK 250

Query: 2846 LDVTYSGDEDRPSSEVLNTSDY--SLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSG 2673
            L         + +S V N  D+  S                    ++ +E +E  +    
Sbjct: 251  LK--------KSTSSVENPDDFDDSGIDALSEVEDGDKETREKSTEVVKEFEEHNNSSKR 302

Query: 2672 SLLPSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPS 2493
             LLP+EVR+IL+ LWENE   CS+I D+ +  S+   Y    SMFFLE++LVPPI+FRPS
Sbjct: 303  DLLPTEVREILKDLWENEHDFCSFIGDLWQSGSEKIDY----SMFFLESVLVPPIKFRPS 358

Query: 2492 AKGGDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTAN 2313
             KGGDSVMEH  T+ L KVL +NI LGNA TN  + S+II RWM+LQ+S+NVL+DSKTA 
Sbjct: 359  TKGGDSVMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKIISRWMNLQESVNVLFDSKTAT 418

Query: 2312 SQSQKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKL 2133
             QSQ+ G  GICQ LEKK+GLFRQ MMGKRVN ACRSVISPDPY+AVN+IGIPP FALKL
Sbjct: 419  VQSQREG-SGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKL 477

Query: 2132 TYPERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSV 1953
            TYPERVTPWN  KLR A+INGPDIHPGAT+Y D +S+ +LP+ +K R A++RKL SSR  
Sbjct: 478  TYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAIARKLLSSRGA 537

Query: 1952 VSQSGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYAN 1773
             ++ GK  +  FEGK V RH++DGD+VLVNRQPTLHKPS+MAHIVRVL GE+TLR+HYAN
Sbjct: 538  TTELGKTCDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVRVLRGEKTLRLHYAN 597

Query: 1772 CSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLI 1593
            CS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY  P+ GD +R LIQDHIV++VL+
Sbjct: 598  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLL 657

Query: 1592 TMKNTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLW 1413
            T ++TFL +  F+QLL+ SGV      S  G    KV V  S+  + ++ PA+ KP PLW
Sbjct: 658  TKRDTFLDKDHFNQLLFSSGVTDMVLSSFSGRSGKKVMVSASDAELLTVTPAILKPVPLW 717

Query: 1412 TGKQVITALLNHITRGCAPCTVKNQGKVPKNYFASAS------------YKNGEEDQDHN 1269
            TGKQVITA+LN IT+G  P TV+   K+P ++F   S             K  +E    N
Sbjct: 718  TGKQVITAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKKIDESWKQN 777

Query: 1268 AEHD-LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHG 1092
               D LLI KNE V GVIDKAQF  YGLVHTV ELYGSN+AG LLS  SRLFT+FLQ HG
Sbjct: 778  LNEDKLLIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQIHG 837

Query: 1091 FTCGVDDLIILPNFDLQRKEKL-EGEDVGEEV-HCDFVKFKPGQIGPEELQLEIEKAICS 918
            FTCGVDDLIIL + D +R ++L E E+VGE V    F      QI P++++  IE+ +  
Sbjct: 838  FTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYE 897

Query: 917  DRESATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVN 738
            D ESA A+LD  + N L N+ +++G  ++  LL+ GLLK    NCIS+MT +GAKGS VN
Sbjct: 898  DGESALASLDRSIVNDL-NQCSSKG--VMNDLLSDGLLKTPGMNCISLMTISGAKGSKVN 954

Query: 737  FQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHC 558
            FQQIS++LGQQ+LEGKRVPRMVSGKTLP F PWD++ RAGGFI+DRFLSGLRPQEYYFHC
Sbjct: 955  FQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHC 1014

Query: 557  MAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHK 378
            MAGREGLVDTAVKTSRSGYLQRCL+KNLESLK+ YD TVRD+DGSI+QF YGEDGVDVH+
Sbjct: 1015 MAGREGLVDTAVKTSRSGYLQRCLMKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHR 1074

Query: 377  TSFLKNFKALEDNRETIWQKFQNH--REFNSYISELP 273
            +SF++ FK L  N++ + Q+         NSYIS+LP
Sbjct: 1075 SSFIEKFKELAINQDMVLQRCSEDMLSGANSYISDLP 1111



 Score =  100 bits (249), Expect = 5e-18
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = -2

Query: 186  FTKERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI 7
            F ++   L+LVK K+  SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI
Sbjct: 1135 FVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI 1194

Query: 6    PR 1
            PR
Sbjct: 1195 PR 1196


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 1162 bits (3007), Expect = 0.0
 Identities = 620/1114 (55%), Positives = 786/1114 (70%), Gaps = 19/1114 (1%)
 Frame = -3

Query: 3557 AAEVVSSVRFAFMTDEEVRKQSVLKITNPNLLDILERPVPGGLYDSAMGPLDDFSNAKCK 3378
            A++VV SVRF+FMT+++VRK S LK+T+P LLD +ERPVPGGLYD  MGPL+D     CK
Sbjct: 10   ASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLND--KEACK 67

Query: 3377 SCGLNAVQCNGHCGHIELVNPSYNPLLVNKLTSILNKTCFYCYHFRAKKEEVENYVSQLE 3198
            SCG   + C GHCGHIELV P Y+PLL + L + L +TCF+C+HF AK  +V+  VSQL+
Sbjct: 68   SCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCVSQLK 127

Query: 3197 RIREGDLAGAKRLGLLQKMAKKKIGTDPEESDGSHASHSGVSSDG--ENQDEHEKDAFWD 3024
             I +GD+  AK+L +      K   T     D   +  SGV++D   E +D   +D  W 
Sbjct: 128  LIMKGDIVSAKQLEV------KSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWT 181

Query: 3023 STLLTESKSVLNEFLKKREKKCGNCKRVNPKITKPTFGWFHVTGISKTEMRSNAIRSSRL 2844
            S    E  +V+  F+K   K+C  CK  NPK+ KP FGW  + G++ + + +N IR  ++
Sbjct: 182  SLQFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKV 241

Query: 2843 DVTYSGDEDRPSSEVLNTSDYSLXXXXXXXXXXXXXXXXXKRDLNRELQEKADLFSGSLL 2664
              + S  E+   S +   S+                      ++ +E +++ D     LL
Sbjct: 242  KKSTSSVENPDDSGIDALSEAE---------DSDKEKREKSTEIAKEFEKQKDT-KRDLL 291

Query: 2663 PSEVRDILRRLWENEAPLCSYICDIQRQNSKISGYMEGFSMFFLETILVPPIRFRPSAKG 2484
            PSEVR IL+ LWENE   CS+I D+ +  S+   Y    SMFFLE++LVPPI+FRP  KG
Sbjct: 292  PSEVRAILKNLWENEHEYCSFIGDLWQSGSEKIDY----SMFFLESVLVPPIKFRPPTKG 347

Query: 2483 GDSVMEHAHTILLGKVLQANIALGNAHTNSAEHSRIIGRWMDLQQSINVLYDSKTANSQS 2304
            GDSVMEH  T+ L KVL +NI LGNA TN  + S++I RWM+LQ+S+NVL+DSK A+ QS
Sbjct: 348  GDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVLFDSKAASVQS 407

Query: 2303 QKNGPDGICQNLEKKDGLFRQNMMGKRVNFACRSVISPDPYLAVNEIGIPPHFALKLTYP 2124
            QK+G  GICQ LEKK+GLFRQ MMGKRVN ACRSVISPDPY+AVNEIGIPP FALKL YP
Sbjct: 408  QKDG-SGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPPCFALKLIYP 466

Query: 2123 ERVTPWNAGKLRSAVINGPDIHPGATNYEDSVSSFRLPANKKMRIAVSRKLPSSRSVVSQ 1944
            ERVTPWN  KLR A+INGPD+HPGAT+Y D +S+ +LP++ K R A++ KL SSR   ++
Sbjct: 467  ERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKLLSSRGATTE 526

Query: 1943 SGKIGEHEFEGKIVRRHLQDGDIVLVNRQPTLHKPSIMAHIVRVLPGERTLRMHYANCSS 1764
             GK  +  FEGK+V R ++DGD+VLVNRQPTLHKPS+MAHIVRVL GE+TLR+HYANCS+
Sbjct: 527  LGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTLRLHYANCST 586

Query: 1763 YNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVAAVLITMK 1584
            YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY  P+ GD +R LIQDHIV++VL+T +
Sbjct: 587  YNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLLTKR 646

Query: 1583 NTFLTRSEFSQLLYGSGVFAAGPGSHPGDRSLKVSVVDSEGLVESILPAVWKPEPLWTGK 1404
            +TFL +  F+QLL+ SGV      S  G    KV++  S+  + +++PA+ KP PLWTGK
Sbjct: 647  DTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAILKPVPLWTGK 706

Query: 1403 QVITALLNHITRGCAPCTVKNQGKVPKNYFASASYK--------NGEEDQDHNAEHD--- 1257
            QVIT +LN IT+G  P TV+   K+P ++F   S +          ++D D + + D   
Sbjct: 707  QVITTVLNLITKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKDIDESWKQDLNE 766

Query: 1256 --LLIWKNELVRGVIDKAQFGKYGLVHTVQELYGSNSAGILLSALSRLFTIFLQFHGFTC 1083
              LLI KNE V GVIDKAQF  +G+VHTV ELYGSN+AG LLS  SRLFT FLQ HGFTC
Sbjct: 767  DKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLFTAFLQIHGFTC 826

Query: 1082 GVDDLIILPNFDLQRKEKL-EGEDVGEEV-HCDFVKFKPGQIGPEELQLEIEKAICSDRE 909
            GVDDLIIL + D +R ++L E E VGE V    F      QI P++++  IE+ +  D E
Sbjct: 827  GVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRSRIERILYEDGE 886

Query: 908  SATATLDMKMKNKLTNRLTTEGSQILKHLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQ 729
            SA A+LD  + N L N+ +++G  ++  LL+ GLLK   KNCIS+MT +GAKGS VNFQQ
Sbjct: 887  SALASLDRSIVNDL-NQCSSKG--VMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQ 943

Query: 728  ISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLSGLRPQEYYFHCMAG 549
            IS++LGQQ+LEGKRVPRMVSGKTLP F PWD++ RAGGFI+DRFLSGLRPQEYYFHCMAG
Sbjct: 944  ISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAG 1003

Query: 548  REGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQFYYGEDGVDVHKTSF 369
            REGLVDTAVKTSRSGYLQRCL+KNLESLKV YD TVRD+DGSI+QF YGEDGVDVH++SF
Sbjct: 1004 REGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSF 1063

Query: 368  LKNFKALEDNRETIWQKFQNH--REFNSYISELP 273
            +  FK L  N++ + Q+         +SYIS+LP
Sbjct: 1064 IGKFKELTVNQDMVLQRCSEDMLSGSSSYISDLP 1097



 Score =  101 bits (252), Expect = 2e-18
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 186  FTKERGFLELVKQKYLTSLAESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI 7
            F ++   L+LVK KY  SLA+ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI
Sbjct: 1121 FVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGI 1180

Query: 6    PR 1
            PR
Sbjct: 1181 PR 1182