BLASTX nr result
ID: Magnolia22_contig00033024
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00033024
(392 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT62736.1 Retrovirus-related Pol polyprotein from transposon TN... 62 4e-13
XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [... 53 3e-11
CAN72704.1 hypothetical protein VITISV_016225 [Vitis vinifera] 53 4e-11
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 59 1e-10
CAN80490.1 hypothetical protein VITISV_004703 [Vitis vinifera] 51 3e-10
AAT44257.1 putative polyprotein [Oryza sativa Japonica Group] 59 7e-10
CAJ86151.1 H0413E07.4 [Oryza sativa Indica Group] 59 7e-10
CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group] 59 7e-10
XP_011624386.1 PREDICTED: cellulose synthase-like protein H1 [Am... 65 7e-10
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 57 1e-09
AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass... 58 2e-09
AAM91886.1 putative polyprotein [Oryza sativa Japonica Group] 58 2e-09
CAD41912.2 OSJNBa0033G05.13 [Oryza sativa Japonica Group] 57 2e-09
BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group] 57 2e-09
CAN81927.1 hypothetical protein VITISV_025281 [Vitis vinifera] 54 2e-09
CAN79451.1 hypothetical protein VITISV_001677 [Vitis vinifera] 49 3e-09
KYP50611.1 Retrovirus-related Pol polyprotein from transposon TN... 50 3e-09
KYP61706.1 Retrovirus-related Pol polyprotein from transposon TN... 49 3e-09
KYP46254.1 Retrovirus-related Pol polyprotein from transposon TN... 51 4e-09
AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-clas... 58 4e-09
>JAT62736.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Anthurium amnicola]
Length = 439
Score = 62.0 bits (149), Expect(2) = 4e-13
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+ VGI ++ IKMFDG+ RILT+VRH+P+++ LISL L+A C F+G + K AL
Sbjct: 210 RAVGIGNIKIKMFDGVIRILTEVRHVPELRNGLISLGTLDASGCTFHGANGILKVSKGAL 269
Query: 370 IVMKAE 387
VMK E
Sbjct: 270 TVMKGE 275
Score = 39.7 bits (91), Expect(2) = 4e-13
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +3
Query: 6 DANKVESSEEMGGCDVLTASKSRYLINEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIG 185
+A+ V SE+ G +VLT S ++WIL SYHM H F SY ++G V +G
Sbjct: 147 EASVVSDSEKEG--EVLTVSSGMDFSDDWILVYGCSYHMCPHREWFESYASHDGRIVPMG 204
Query: 186 N 188
N
Sbjct: 205 N 205
>XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [Arachis ipaensis]
Length = 215
Score = 53.1 bits (126), Expect(2) = 3e-11
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCK 336
K VG+ +V IKM DG+ R L DVRH+PD++ NLIS+ LE CK
Sbjct: 164 KAVGLGTVRIKMHDGVVRTLKDVRHIPDLRKNLISIGLLEKNGCK 208
Score = 42.0 bits (97), Expect(2) = 3e-11
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 6 DANKVESSEEMGGCDVLTASKSRY-LINEWILNAKASYHMTSH*N*FTSYNEYNGGKVFI 182
+A+ V + EE D + ++ Y + ++WIL++ AS+HM + FT+Y NGG V +
Sbjct: 102 EASYVSNDEE----DCYSVTEQSYEIFDKWILDSGASHHMCPNRKWFTTYESINGGTVLM 157
Query: 183 GNE 191
GN+
Sbjct: 158 GND 160
>CAN72704.1 hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 52.8 bits (125), Expect(2) = 4e-11
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +1
Query: 190 NFTYKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALE 321
N + VVGI +V I MFDGM+ L +VRH+PD+K+NLISL L+
Sbjct: 81 NMSCSVVGIGTVAINMFDGMKSTLKEVRHVPDLKINLISLGTLD 124
Score = 42.0 bits (97), Expect(2) = 4e-11
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 87 EWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGN 188
EW+L++ +YHM + F+SY E+NGG V +GN
Sbjct: 47 EWVLDSGCTYHMCPRIDWFSSYQEFNGGNVLLGN 80
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +1
Query: 190 NFTYKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF---- 357
N K +GI S+ IKM+DG+ R LT VRH+ D+K NLISL LEA CK++
Sbjct: 318 NAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLDLKKNLISLGTLEANGCKYSAEGGVLRVS 377
Query: 358 KWALIVMKAE 387
+ ALI+MK +
Sbjct: 378 RGALILMKVK 387
Score = 34.3 bits (77), Expect(2) = 1e-10
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGN 188
+EWIL++ SYHM + + F +Y +GG V +GN
Sbjct: 283 DEWILDSGYSYHMCPYKDRFHTYEHDDGGVVLMGN 317
>CAN80490.1 hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 50.8 bits (120), Expect(2) = 3e-10
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +1
Query: 190 NFTYKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEA----IRCKFNGFDDF 357
N + VVGI ++ I M DG R L +VRH+PD+K NLISL L+ + K
Sbjct: 211 NMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTIS 270
Query: 358 KWALIVMKAE 387
K A++VMK +
Sbjct: 271 KXAMVVMKGQ 280
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 87 EWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGN 188
EW+L++ +YHM + F+SY E NGGK+ +GN
Sbjct: 177 EWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGN 210
>AAT44257.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 58.5 bits (140), Expect(2) = 7e-10
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V G+++V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 337 EVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKVYKYSGGDGILKVTKGSL 396
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 397 VVMKAD 402
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 298 DQWILDTACTYHMCLNRDWFATYEAVQGGTVLMGDD 333
>CAJ86151.1 H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 58.5 bits (140), Expect(2) = 7e-10
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 322 EVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSL 381
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 382 VVMKAD 387
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 318
>CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 58.5 bits (140), Expect(2) = 7e-10
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 154 EVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSL 213
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 214 VVMKAD 219
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 150
>XP_011624386.1 PREDICTED: cellulose synthase-like protein H1 [Amborella
trichopoda]
Length = 923
Score = 64.7 bits (156), Expect(2) = 7e-10
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Frame = +1
Query: 199 YKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNG----FDDFKWA 366
+K +G+ + IKM+DG+ R LTDVRH+PD+K NLISL L++ CKF G + K A
Sbjct: 736 WKTIGVGTSTIKMYDGVVRTLTDVRHIPDLKKNLISLGTLDSNDCKFVGEGGVLNILKGA 795
Query: 367 LIVMKAE 387
L+VMK +
Sbjct: 796 LVVMKGK 802
Score = 25.8 bits (55), Expect(2) = 7e-10
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 111 SYHMTSH*N*FTSYNEYNGGKVFIGNEFYL*SCWYKIG 224
S +M H + FT+Y + G V +GN+ + W IG
Sbjct: 707 SNYMYPHRDWFTTYKSIDSGSVLMGND----TAWKTIG 740
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 57.4 bits (137), Expect(2) = 1e-09
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 246 EVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSL 305
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 306 VVMKAD 311
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDD 242
>AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 58.2 bits (139), Expect(2) = 2e-09
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 372 EVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSL 431
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 432 VVMKAD 437
Score = 31.2 bits (69), Expect(2) = 2e-09
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDD 368
>AAM91886.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 58.2 bits (139), Expect(2) = 2e-09
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 372 EVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSL 431
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 432 VVMKAD 437
Score = 31.2 bits (69), Expect(2) = 2e-09
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDD 368
>CAD41912.2 OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 337 EVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSL 396
Query: 370 IVMKA 384
+VMKA
Sbjct: 397 VVMKA 401
Score = 32.0 bits (71), Expect(2) = 2e-09
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDD 333
>BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LIS L+ K++G D K +L
Sbjct: 303 EVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSL 362
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 363 VVMKAD 368
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WIL+ +YHM + + F +Y GG V +G++
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDD 299
>CAN81927.1 hypothetical protein VITISV_025281 [Vitis vinifera]
Length = 425
Score = 53.5 bits (127), Expect(2) = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 190 NFTYKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKF 339
N YKVVGI ++ IKM DG+ R L DVRH+P++K LISL L++ C +
Sbjct: 305 NVAYKVVGICTIQIKMHDGIIRTLIDVRHVPELKKILISLGILDSNICTY 354
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 78 LINEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGN 188
L +EWIL+ SYHM+ + F +Y +GGKV + N
Sbjct: 268 LXDEWILDLGCSYHMSPNRAWFNTYQPIHGGKVLMRN 304
>CAN79451.1 hypothetical protein VITISV_001677 [Vitis vinifera]
Length = 805
Score = 48.9 bits (115), Expect(2) = 3e-09
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDFKWALIVMK 381
KV GI ++ IKMFDG+ R L DVRH+ D+ NLISL L+ NGF +K VMK
Sbjct: 182 KVAGIGNIIIKMFDGVVRTLCDVRHVSDLXKNLISLGTLDC-----NGF-SYKSTXGVMK 235
Score = 39.7 bits (91), Expect(2) = 3e-09
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 69 SRYLINEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
+ +L + WIL++ SYHMT + + F +Y N G V +GN+
Sbjct: 138 TNHLTDYWILDSACSYHMTPNKDWFNTYRSVNSGSVLMGND 178
>KYP50611.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 448
Score = 49.7 bits (117), Expect(2) = 3e-09
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFN 342
K VGI ++ ++M DG+ R LT+VRH+PD+K NLIS+ L++ K N
Sbjct: 90 KTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKGFKCN 136
Score = 38.9 bits (89), Expect(2) = 3e-09
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++W+L++ SYHM + + F +Y E GG+VF+GN+
Sbjct: 51 DQWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGND 86
>KYP61706.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 295
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 190 NFTYKVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLIS 306
N KV+GI SV ++MFDGM+R+L D+RH+P++ + L S
Sbjct: 185 NKACKVIGIGSVRLRMFDGMDRVLQDIRHVPELSVGLES 223
Score = 40.0 bits (92), Expect(2) = 3e-09
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 87 EWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGN 188
EWIL++ S+HMT + + F +YN+ +GG V +GN
Sbjct: 151 EWILDSGCSFHMTPNKDWFETYNQVDGGTVLLGN 184
>KYP46254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 50.8 bits (120), Expect(2) = 4e-09
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRAL--EAIRCKFNG 345
K +GI ++ IKM DG+ R LT+VRH+PD+K NLIS+ L + +C G
Sbjct: 251 KTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEG 300
Score = 37.4 bits (85), Expect(2) = 4e-09
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 87 EWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
+W+L++ SYHM + + F +Y + +GG VF+GN+
Sbjct: 213 QWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGND 247
>AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA91548.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 58.2 bits (139), Expect(2) = 4e-09
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +1
Query: 202 KVVGIKSVHIKMFDGMERILTDVRHLPDIKMNLISLRALEAIRCKFNGFDDF----KWAL 369
+V GI +V IKMFDG R L+DVRH+P++K +LISL L+ K++G D K +L
Sbjct: 544 EVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSL 603
Query: 370 IVMKAE 387
+VMKA+
Sbjct: 604 VVMKAD 609
Score = 29.6 bits (65), Expect(2) = 4e-09
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 84 NEWILNAKASYHMTSH*N*FTSYNEYNGGKVFIGNE 191
++WILN YHM + + F +Y G V +G++
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDD 540