BLASTX nr result

ID: Magnolia22_contig00027433 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00027433
         (551 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010269879.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   2e-17
XP_010274574.1 PREDICTED: pentatricopeptide repeat-containing pr...    87   9e-17
JAT58897.1 Pentatricopeptide repeat-containing protein At4g19440...    71   4e-11
XP_006850872.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   1e-10
XP_017698757.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   5e-07
XP_019706448.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   1e-06

>XP_010269879.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera] XP_010269880.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic-like [Nelumbo nucifera]
          Length = 854

 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 43/62 (69%), Positives = 51/62 (82%)
 Frame = -3

Query: 549 MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISENLIKQKLVPPHIKPFS 370
           +EEAF ICDQ+ Q G+ LDEITYTTLVHGL SSGFSREA+LISE +IK+ L+P + KP  
Sbjct: 786 IEEAFRICDQMMQRGITLDEITYTTLVHGLCSSGFSREATLISEGIIKRGLLPENAKPIQ 845

Query: 369 SI 364
           SI
Sbjct: 846 SI 847


>XP_010274574.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera] XP_010274575.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic-like [Nelumbo nucifera]
          Length = 856

 Score = 87.4 bits (215), Expect = 9e-17
 Identities = 40/58 (68%), Positives = 52/58 (89%)
 Frame = -3

Query: 549 MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISENLIKQKLVPPHIKP 376
           +EEAF++CDQ+SQ G++LDEITYTTLV+GL SSGFSREA+LISE + K+ ++P HIKP
Sbjct: 788 IEEAFKLCDQMSQRGIMLDEITYTTLVNGLCSSGFSREATLISEGITKRGMLPEHIKP 845


>JAT58897.1 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic,
            partial [Anthurium amnicola]
          Length = 974

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 34/53 (64%), Positives = 44/53 (83%)
 Frame = -3

Query: 549  MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISENLIKQKLVP 391
            MEEAF+ICDQIS+ G+VLDEITYTTLVHGLS++G S+EA  I E+++ +   P
Sbjct: 892  MEEAFDICDQISRLGIVLDEITYTTLVHGLSTAGCSKEAISILESMVARDQKP 944


>XP_006850872.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Amborella trichopoda] ERN12453.1
           hypothetical protein AMTR_s00025p00148960 [Amborella
           trichopoda]
          Length = 839

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = -3

Query: 549 MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISENLIKQKLVPPHIKPFS 370
           M+ AF+ICDQ+SQ GLV D+++YTTLVH L  SG   EASLIS+ ++ Q +VP H  P  
Sbjct: 774 MDGAFKICDQMSQRGLVFDDVSYTTLVHWLHDSGHQYEASLISKEMMVQGVVPGHNNPVF 833

Query: 369 S 367
           S
Sbjct: 834 S 834


>XP_017698757.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Phoenix dactylifera]
          Length = 841

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -3

Query: 549 MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISE-NLIKQKLVP 391
           MEEAF+I D ++Q  +VLDE++YTTLVHG++S G   EA+ IS+ ++IKQ + P
Sbjct: 788 MEEAFKISDHMTQENMVLDEVSYTTLVHGITSVGCQNEAASISDGSIIKQGIGP 841


>XP_019706448.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Elaeis guineensis]
          Length = 845

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -3

Query: 549 MEEAFEICDQISQSGLVLDEITYTTLVHGLSSSGFSREASLISE-NLIKQKLVP 391
           MEEAF+I D ++Q G VLDE++YTTLVHG++S+G  +E + IS+ ++I Q + P
Sbjct: 792 MEEAFKISDYMTQKGAVLDEVSYTTLVHGITSTGCQKEVASISKGSIINQGIGP 845


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