BLASTX nr result

ID: Magnolia22_contig00022156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00022156
         (616 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010931018.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    59   8e-07

>XP_010931018.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g06140, mitochondrial-like [Elaeis
           guineensis]
          Length = 943

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
 Frame = +1

Query: 196 QETSSEISDFHLSRVKKRSSNPDMARVKGSFHFFTSNLSIPLVLMALLVQKPLQDWQKDP 375
           Q   + I  +HL     R      A ++ S       L++PLVL A      ++  +   
Sbjct: 24  QNAWNSILKYHLKLKNDRGILATFAEMEAS-GVAPDRLTLPLVLKACTRLHDVKLGKSIH 82

Query: 376 SHHRNIPFI*--------ISLYCK*GFLNEAS*LFDKMTERDLVSWDVMICWHISNFQFR 531
           SH      I         I  YCK GFL++A  LF++MT+ DL SW+ MI  H+ N Q+R
Sbjct: 83  SHISGTDLIEDVRVRTALIDFYCKCGFLDDAYELFEEMTQGDLASWNAMISGHVKNLQYR 142

Query: 532 CTIDLFSDIR 561
            +I LFS +R
Sbjct: 143 DSILLFSRMR 152


Top