BLASTX nr result
ID: Magnolia22_contig00022063
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00022063
(1452 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAD34493.1 Gag-Pol [Ipomoea batatas] 178 1e-44
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 174 2e-43
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] 170 6e-42
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 168 4e-41
KYP36645.1 Retrovirus-related Pol polyprotein from transposon TN... 167 5e-41
KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 167 5e-41
KYP38095.1 Retrovirus-related Pol polyprotein from transposon TN... 167 7e-41
KYP67664.1 Retrovirus-related Pol polyprotein from transposon TN... 166 1e-40
KYP42748.1 Retrovirus-related Pol polyprotein from transposon TN... 166 1e-40
AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-clas... 166 2e-40
KYP38864.1 Retrovirus-related Pol polyprotein from transposon TN... 159 1e-39
AAM08562.1 Putative retroelement [Oryza sativa Japonica Group] A... 163 1e-39
ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] 162 3e-39
CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera] 161 6e-39
CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera] 161 6e-39
ACL97387.1 Gag-Pol polyprotein [Lotus japonicus] 160 1e-38
CAD40363.2 OSJNBa0093P23.9 [Oryza sativa Japonica Group] 160 1e-38
AFB73912.1 polyprotein [Citrus sinensis] 160 1e-38
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 160 2e-38
AAM91886.1 putative polyprotein [Oryza sativa Japonica Group] 159 3e-38
>BAD34493.1 Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 178 bits (452), Expect = 1e-44
Identities = 121/319 (37%), Positives = 172/319 (53%), Gaps = 18/319 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF TF K VE + KK+ + D+ G++TS+EF+ F K E I R TV +TP
Sbjct: 510 KKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTP 569
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E VN Y+VN +PST I K +E+W+
Sbjct: 570 QQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWT 629
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G V+YS L IF Y+ E K D + +KC F+ Y+DGVKG RL+D K++IS
Sbjct: 630 GKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVIS 689
Query: 452 *DVRFDEDSL--FHKDERKELEKPKVINIEIKKKSIYR*NLSRP*VEQP-------LFRR 300
DV F ED L D+ E EKP+ I+++++ + + P E+P R
Sbjct: 690 RDVIFVEDRLQRGEVDDSTEKEKPETTQIQVEEEFEQDSSEAEPAHEEPEPESSGAPTTR 749
Query: 299 NPPRDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYK 129
R+ + P + D + N+A+ L+T +G PST QEA++ + AAM +E+ +L+K
Sbjct: 750 QSDREKRRPTWHSDYVMEGNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHK 809
Query: 128 NEICKLVKLSVGHKAISCK 72
N LV L G K I K
Sbjct: 810 NNTWDLVPLPQGRKPIGNK 828
>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 174 bits (442), Expect = 2e-43
Identities = 119/321 (37%), Positives = 166/321 (51%), Gaps = 20/321 (6%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K +E T KK+ L+ D+ G++ EF F K E IVR TV HTP
Sbjct: 520 KKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTP 579
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L G+ K E V Y++N SPST I+ K +E+W
Sbjct: 580 QQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWK 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G V+YS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 640 GKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 699
Query: 452 *DVRFDEDSLFHKDERKELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFRRNPPRDCKLP 273
DV F E+ L K + K I +++++KS S +P+ P D
Sbjct: 700 RDVVFAENELQSKQKNDSTSKETAI-VQMEEKS----KESDSSEAEPVHEEQEPDDVNNG 754
Query: 272 AR--------------YEDDSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSL 135
R Y S+ A+ LIT EG PST EAL+G A + + AM++EM +L
Sbjct: 755 VRRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEAL 814
Query: 134 YKNEICKLVKLSVGHKAISCK 72
++N+ +LV+L G KAI K
Sbjct: 815 HRNKTWELVELPKGRKAIGNK 835
>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 170 bits (431), Expect = 6e-42
Identities = 117/317 (36%), Positives = 167/317 (52%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K +E T KK+ L+ D+ G++ EF F K E IVR TV HTP
Sbjct: 520 KKKSDVFPVFKAFKAQIELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTP 579
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R + L G+ K E V Y++N SPST I+ K +E+W
Sbjct: 580 QQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWK 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G V+YS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 640 GKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 699
Query: 452 *DVRFDEDSLFHKDERKELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFR-------RNP 294
DV F E+ L + + K I +++++KS + V + R
Sbjct: 700 RDVVFAENELQSEQKNDSTSKETAI-VQMEEKSKESDSSEAESVHEEQEPDDVNDGVRRS 758
Query: 293 PRDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R + P+ D S+ A+ LIT EG PST EAL+G A + + AM++EM +L++N+
Sbjct: 759 TRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNK 818
Query: 122 ICKLVKLSVGHKAISCK 72
+LV+L G KAI K
Sbjct: 819 TWELVELPKGRKAIGNK 835
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 168 bits (425), Expect = 4e-41
Identities = 115/317 (36%), Positives = 166/317 (52%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K +E T KK+ L+ D+ G++ EF F K E IVR TV HTP
Sbjct: 520 KKKSDVFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTP 579
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R + L G+ K E Y++N SPST I+ K +E+W
Sbjct: 580 QQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWK 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G V+YS L +F Y E+ K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 640 GKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 699
Query: 452 *DVRFDEDSLFHKDERKELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFR-------RNP 294
DV F E+ L + + K I +++++KS + V + R
Sbjct: 700 RDVVFAENELQSEQKNDSTSKETAI-VQMEEKSKESDSSEAESVHEEQEPDDVNDGVRRS 758
Query: 293 PRDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R + P+ D S+ A+ LIT EG PST EAL+G A + + AM++EM +L++N+
Sbjct: 759 TRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNK 818
Query: 122 ICKLVKLSVGHKAISCK 72
+LV+L G KAI K
Sbjct: 819 TWELVELPKGRKAIGNK 835
>KYP36645.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 167 bits (424), Expect = 5e-41
Identities = 117/317 (36%), Positives = 163/317 (51%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE T K++ L+ D+ G++ +F F K E I R TV HTP
Sbjct: 470 KKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTP 529
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E V Y++N SPST I K +E+WS
Sbjct: 530 QQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWS 589
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 590 GKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 649
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFRRNPP----- 291
DV F E L + E ++ ++ I K K + EQ N
Sbjct: 650 RDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQI 709
Query: 290 -RDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R+ + P+ + D S+ A+ L+T EG PST QEAL + +AAM++E+ +L++N+
Sbjct: 710 RRERRRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNK 769
Query: 122 ICKLVKLSVGHKAISCK 72
+LV L G KAI CK
Sbjct: 770 TWELVDLPKGRKAIGCK 786
>KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 167 bits (424), Expect = 5e-41
Identities = 117/317 (36%), Positives = 163/317 (51%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE T K++ L+ D+ G++ +F F K E I R TV HTP
Sbjct: 519 KKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTP 578
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E V Y++N SPST I K +E+WS
Sbjct: 579 QQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWS 638
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 639 GKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 698
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFRRNPP----- 291
DV F E L + E ++ ++ I K K + EQ N
Sbjct: 699 RDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQI 758
Query: 290 -RDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R+ + P+ + D S+ A+ L+T EG PST QEAL + +AAM++E+ +L++N+
Sbjct: 759 RRERRRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNK 818
Query: 122 ICKLVKLSVGHKAISCK 72
+LV L G KAI CK
Sbjct: 819 TWELVDLPKGRKAIGCK 835
>KYP38095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 167 bits (423), Expect = 7e-41
Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE T K++ L+ D+ G++ +F F K E I R TV HTP
Sbjct: 470 KKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTP 529
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E V Y++N SPST I K +E+W+
Sbjct: 530 QQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWN 589
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 590 GKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 649
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFR------RNP 294
DV F E L + E ++ ++ I K K + EQ R
Sbjct: 650 RDVVFAETELQKEQENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDEQEPNEDNDGDVRRT 709
Query: 293 PRDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R K P+ + D S+ A+ L+T EG PST QEAL + +AAM++E+ +L++N+
Sbjct: 710 TRQTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNK 769
Query: 122 ICKLVKLSVGHKAISCK 72
+LV L G KAI CK
Sbjct: 770 TWELVDLPKGRKAIGCK 786
>KYP67664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 166 bits (421), Expect = 1e-40
Identities = 116/317 (36%), Positives = 163/317 (51%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE T K++ L+ D+ G++ +F F K E I R TV HTP
Sbjct: 470 KKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTP 529
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E V Y++N SPST I K +E+W+
Sbjct: 530 QQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWN 589
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 590 GKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 649
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFRRNPP----- 291
DV F E L + E ++ ++ I K K + EQ N
Sbjct: 650 RDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQI 709
Query: 290 -RDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R+ + P+ + D S+ A+ L+T EG PST QEAL + +AAM++E+ +L++N+
Sbjct: 710 RRERRRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNK 769
Query: 122 ICKLVKLSVGHKAISCK 72
+LV L G KAI CK
Sbjct: 770 TWELVDLPKGRKAIGCK 786
>KYP42748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 166 bits (421), Expect = 1e-40
Identities = 116/317 (36%), Positives = 163/317 (51%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE T K++ L+ D+ G++ +F F K E I R TV HTP
Sbjct: 519 KKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTP 578
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E V Y++N SPST I K +E+W+
Sbjct: 579 QQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWN 638
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 639 GKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 698
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFRRNPP----- 291
DV F E L + E ++ ++ I K K + EQ N
Sbjct: 699 RDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQI 758
Query: 290 -RDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R+ + P+ + D S+ A+ L+T EG PST QEAL + +AAM++E+ +L++N+
Sbjct: 759 RRERRRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNK 818
Query: 122 ICKLVKLSVGHKAISCK 72
+LV L G KAI CK
Sbjct: 819 TWELVDLPKGRKAIGCK 835
>AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA91548.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 2340
Score = 166 bits (420), Expect = 2e-40
Identities = 123/343 (35%), Positives = 176/343 (51%), Gaps = 35/343 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K F F KTMVE+ T +K+ +L+ D+ +F SK F + K E IVRH TV HTP
Sbjct: 738 KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTP 797
Query: 794 *HNGMTEQMNR-----FPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR LSN GL K+ E V+ Y++N SPS I+ K +EVWS
Sbjct: 798 QQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 857
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F AY+H V+ K + R KC F+ Y GVKG +L+ T+K++IS
Sbjct: 858 GSPANYSDLRVFGCTAYAH---VDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 914
Query: 452 *DVRFDEDSLFH--KDERKELEKPKVINIEIK---------KKSIYR*NLSRP*VE---- 318
+V F E + H +E + +++++ +K N P +E
Sbjct: 915 RNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNS 974
Query: 317 --------QPLFRRNPPRDCKLPARYEDDSNI-AFSL-----ITNEGNPSTLQEALDGLV 180
+ + + P R+ K P RY +++NI A++L I PST EA+
Sbjct: 975 SIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDD 1034
Query: 179 AKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK*I*NKKE 51
+ + AM+DEM SL KN +LVKL K I CK I +KE
Sbjct: 1035 CNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKE 1077
>KYP38864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 507
Score = 159 bits (403), Expect = 1e-39
Identities = 125/348 (35%), Positives = 176/348 (50%), Gaps = 41/348 (11%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K+ F F K ++EK T K++ L+ D+ +F SKEFN + K E I R TVR+TP
Sbjct: 142 KHKNQAFKCFKEWKILMEKQTSKRVKRLRTDNGLEFCSKEFNDYCKAEGIARQYTVRNTP 201
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R LSN GL + E V+ T Y++N SPST+I+CK +EVWS
Sbjct: 202 QQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCKTPIEVWS 261
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
NYS L +F +AY H V K + R KK F+ Y DGVKG R++ RK+I+S
Sbjct: 262 NKPANYSLLRVFGCNAYYH---VNEGKLEPRSKKGLFMGYGDGVKGYRIWSPAERKVILS 318
Query: 452 *DVRFDEDSLFH---------KDER--KELEKPKVINI-----------EIKKKSIYR*N 339
DV FDE LF+ K+++ K++E K E ++ +R +
Sbjct: 319 RDVIFDESHLFYPSLEFTVSGKNQKILKQVEDGKTSGSILDEEKSEDFNEESQQQQFRVD 378
Query: 338 LSRP*VEQ---------PLFRRNPPRDCKLPARYEDDSNIAFSLITNE----GNPSTLQE 198
S P Q + P R P RY + +A++L E P+T +E
Sbjct: 379 DSDPSSPQGSSLQTQYDTEAYQKPKRISNPPVRYGFEDMMAYALHVAEEVDTTEPATYKE 438
Query: 197 ALDGLVAKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK*I*NKK 54
A+D A K + AM +EM SL KN+ KLVK G + K I +K
Sbjct: 439 AMDHAEADKWILAMKEEMESLQKNQTWKLVKFPKGRHVVGRKWIFKRK 486
>AAM08562.1 Putative retroelement [Oryza sativa Japonica Group] AAM10749.1
Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 163 bits (413), Expect = 1e-39
Identities = 124/343 (36%), Positives = 177/343 (51%), Gaps = 35/343 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K F F KTMVE+ T +K+ +L+ D+ F SK F + K E IVRH TV HTP
Sbjct: 492 KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTP 551
Query: 794 *HNGMTEQMNR-----FPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR LSN GL K+ E V+ Y++N SPS I+ K ++VWS
Sbjct: 552 QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWS 611
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F AY+H V+ K + R KC F+ Y GVKG +L+ T+K++IS
Sbjct: 612 GSPANYSDLRVFGCIAYAH---VDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 668
Query: 452 *DVRFDEDSLFH--KDERKELEKPKVINIEIK---------KKSIYR*NLSRP*VE---- 318
+V F E + H +E + +++++ +K NL P +E
Sbjct: 669 RNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINLDAPVIEDSDS 728
Query: 317 --------QPLFRRNPPRDCKLPARYEDDSNI-AFSLITN---EGN--PSTLQEALDGLV 180
+ + P R+ K P RY +++NI A++L EGN PST +A+
Sbjct: 729 SIVQQSPKHSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDD 788
Query: 179 AKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK*I*NKKE 51
+ + AM+DEM SL KN +LVKL K I CK I +KE
Sbjct: 789 CNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKE 831
>ACL97385.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 162 bits (410), Expect = 3e-39
Identities = 115/316 (36%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K +E T KK+ L+ D+ G++ EF F K E IVR TV HTP
Sbjct: 520 KKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTP 579
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R + L + K E V Y++N SPST I+ K +E+W
Sbjct: 580 QQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWK 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G V+YS L +F Y ER K D + +KC F+ Y+D VKG RL+D RK+++S
Sbjct: 640 GKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVS 699
Query: 452 *DVRFDEDSLFHKDER-KELEKPKVINIEIKKKSIYR*NLSRP*VEQPLFR-----RNPP 291
DV F E+ L + + ++ ++ IE K K EQ R
Sbjct: 700 RDVVFAENELQSEQKNDSTFKETAILQIEEKSKESDSSEAESVHEEQEPDDVNNGVRRST 759
Query: 290 RDCKLPARYED---DSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNEI 120
R + P+ D + A+ LI EG PST EAL+G A + + A+++EM +L KN+
Sbjct: 760 RQTQKPSWQSDYVMTGHDAYCLIAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKT 819
Query: 119 CKLVKLSVGHKAISCK 72
+LV+L G KAI K
Sbjct: 820 WELVELPKGRKAIGNK 835
>CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 161 bits (408), Expect = 6e-39
Identities = 127/337 (37%), Positives = 175/337 (51%), Gaps = 36/337 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K K +VF F KTMVEK T K + L+ D+ +F +K+F++F + E IVRH TVRHTP
Sbjct: 630 KAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTP 689
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R + GL K+ E VN Y+VN SPST I+ K EVWS
Sbjct: 690 QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWS 749
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLY--DWVTRKII 459
G NYS L IF AY+H V K + R KC F+ Y+ GVKG RL+ + T K I
Sbjct: 750 GKPSNYSGLKIFGCPAYAH---VSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFI 806
Query: 458 IS*DVRFDEDSLFHKDERKEL---------EKPKVINIEIKKKSIYR*NLSRP*VEQPLF 306
IS DV FDE ++F +RKE + +E + + + EQP+
Sbjct: 807 ISRDVTFDESAMF--GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPVI 864
Query: 305 RRN---------PPRDCKLPARYED------DSNIAFSLITNE----GNPSTLQEALDGL 183
+N P R+ + P RY D + +AF+L E P + +EA++
Sbjct: 865 DQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESK 924
Query: 182 VAKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK 72
+KK +++M DEM SL KN+ +LV L G K + CK
Sbjct: 925 DSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCK 961
>CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 161 bits (408), Expect = 6e-39
Identities = 127/337 (37%), Positives = 175/337 (51%), Gaps = 36/337 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K K +VF F KTMVEK T K + L+ D+ +F +K+F++F + E IVRH TVRHTP
Sbjct: 843 KAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTP 902
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN R + GL K+ E VN Y+VN SPST I+ K EVWS
Sbjct: 903 QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWS 962
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLY--DWVTRKII 459
G NYS L IF AY+H V K + R KC F+ Y+ GVKG RL+ + T K I
Sbjct: 963 GKPSNYSGLKIFGCPAYAH---VSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFI 1019
Query: 458 IS*DVRFDEDSLFHKDERKEL---------EKPKVINIEIKKKSIYR*NLSRP*VEQPLF 306
IS DV FDE ++F +RKE + +E + + + EQP+
Sbjct: 1020 ISRDVTFDESAMF--GQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPVI 1077
Query: 305 RRN---------PPRDCKLPARYED------DSNIAFSLITNE----GNPSTLQEALDGL 183
+N P R+ + P RY D + +AF+L E P + +EA++
Sbjct: 1078 DQNDSQSIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESK 1137
Query: 182 VAKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK 72
+KK +++M DEM SL KN+ +LV L G K + CK
Sbjct: 1138 DSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCK 1174
>ACL97387.1 Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 160 bits (406), Expect = 1e-38
Identities = 112/317 (35%), Positives = 166/317 (52%), Gaps = 16/317 (5%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KS V++ F K VE T K++ L+ D+ G++T +F F K E I R TV HTP
Sbjct: 520 KKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTP 579
Query: 794 *HNGMTEQMNRF-----PSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL K E Y++N SPST I K +E+W
Sbjct: 580 QQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWK 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G +YS L +F Y ER K D + ++CTF+ Y+D VKG RL+D RKI +S
Sbjct: 640 GKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVS 699
Query: 452 *DVRFDEDSLFHKDERKELEKPKVINIEIKKKSIYR*NLSRP*VEQ-------PLFRRNP 294
DV F E+ L K+++ + + +EI++KS + + P E+ R
Sbjct: 700 RDVIFVENEL-QKEQKNDGTTKETATVEIEEKSGEENSEAEPEHEEQEPNEVNDAEPRRT 758
Query: 293 PRDCKLP---ARYEDDSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMNSLYKNE 123
R + P + Y S+ A+ L++ +G PST EA++G A +AAM +E+ +L++N
Sbjct: 759 TRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNN 818
Query: 122 ICKLVKLSVGHKAISCK 72
+LV+L G KAI K
Sbjct: 819 TWELVELPKGRKAIGNK 835
>CAD40363.2 OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 160 bits (405), Expect = 1e-38
Identities = 121/321 (37%), Positives = 176/321 (54%), Gaps = 13/321 (4%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K F F KTMVE+ T +K+ +L+ D+ +F SK F + K E IVRH +TP
Sbjct: 363 KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH----YTP 418
Query: 794 *HNGMTEQMNR-----FPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR LSN GL K+ V+ T Y++N SPS I+ K ++VWS
Sbjct: 419 QQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWS 478
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F AY+H V+ K + R KC F+ YS GVKG +L+ T+K++IS
Sbjct: 479 GFPANYSDLRVFGCTAYAH---VDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVIS 535
Query: 452 *DVRFDEDSLFHKDERKELEKPKV-INIEIKKKSIYR*NLSRP*VEQPLFRRNPPRDCKL 276
+V F E + H +KP + +E ++K+ ++ P ++ + + P R+ K
Sbjct: 536 RNVVFHESVMLH-------DKPSTNVPVESQEKA----SVQFP--KRSIAKDKPKRNTKP 582
Query: 275 PARYEDDSNI-AFSLITN---EGN--PSTLQEALDGLVAKK*VAAMYDEMNSLYKNEICK 114
P RY +++NI A++L EGN PST EA+ + + M+DEM SL KN +
Sbjct: 583 PQRYIEEANIVAYALSVTEEIEGNAEPSTYSEAIVSDDCNRWITTMHDEMESLEKNHTWE 642
Query: 113 LVKLSVGHKAISCK*I*NKKE 51
LVKL K I CK I +KE
Sbjct: 643 LVKLPKEKKPIRCKWIFKRKE 663
>AFB73912.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 160 bits (405), Expect = 1e-38
Identities = 116/323 (35%), Positives = 159/323 (49%), Gaps = 22/323 (6%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K KSDVF F K VE + KK+ L+ D+ G++T EF F K E I R TV +TP
Sbjct: 520 KKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTP 579
Query: 794 *HNGMTEQMNR-----FPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR + L GL E Y+VN SPST I K +E+W+
Sbjct: 580 QQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWT 639
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G +YS L F Y ER K D + +KC F+ Y+DGVKG RL+D KI+IS
Sbjct: 640 GKPADYSYLHAFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVIS 699
Query: 452 *DVRFDEDSLFHK--DERKELEKPKVINIEIKK--------------KSIYR*NLSRP*V 321
DV F ED L K D+ EK + + + ++ + P V
Sbjct: 700 RDVIFVEDQLQRKDGDDGTVKEKSETVPVYVENNPENSDSSEAAPEHEEQEPVESEAPEV 759
Query: 320 EQPLFRRNPPRDCKLPARYEDDSNIAFSLITNEGNPSTLQEALDGLVAKK*VAAMYDEMN 141
+ R PP + Y + N+A+ L+T +G PST EAL+ L + AM +E+
Sbjct: 760 RRSTRERRPP---TWHSEYVTEINVAYCLLTEDGEPSTFHEALNSLDVALWMTAMQEEIE 816
Query: 140 SLYKNEICKLVKLSVGHKAISCK 72
+L+KN+ +LV L G KAI K
Sbjct: 817 ALHKNKTWELVPLPHGRKAIGNK 839
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 160 bits (404), Expect = 2e-38
Identities = 120/343 (34%), Positives = 175/343 (51%), Gaps = 35/343 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K F F KTMVE+ T +K+ +L+ D+ + SK F + K E IVRH TV HTP
Sbjct: 440 KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTP 499
Query: 794 *HNGMTEQMNR-----FPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MNR LSN L K+ E V+ Y++N SPS I+ K +EVWS
Sbjct: 500 QQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 559
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F AY+H V+ K + RV KC F+ Y GVKG +L+ T+K++IS
Sbjct: 560 GSPANYSDLRVFGCTAYAH---VDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVIS 616
Query: 452 *DVRFDEDSLFH--KDERKELEKPKVINIEIK---------KKSIYR*NLSRP*VE---- 318
+V F E + H +E + ++++++ +K N P +E
Sbjct: 617 RNVVFHESIMLHDKPSTNVPVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDS 676
Query: 317 --------QPLFRRNPPRDCKLPARYEDDSNI-AFSL-----ITNEGNPSTLQEALDGLV 180
+ + + P R+ K P RY +++NI A++L I PST +A+
Sbjct: 677 SIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDD 736
Query: 179 AKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK*I*NKKE 51
+ + AM+DEM SL KN +L KL K I CK I +KE
Sbjct: 737 CNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKE 779
>AAM91886.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 159 bits (403), Expect = 3e-38
Identities = 120/343 (34%), Positives = 173/343 (50%), Gaps = 35/343 (10%)
Frame = -2
Query: 974 KNKSDVFTTFDV*KTMVEK*T*KKLNVLKRDSRGKFTSKEFNQFYKDE*IVRHNTVRHTP 795
K+K F F KTMVE+ T KK+ +L+ D+ +F SK F + K E IV H TV HTP
Sbjct: 566 KHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTP 625
Query: 794 *HNGMTEQMN-----RFPSTLSNVGLGKEL*NETVNMTYYMVN*SPSTLINCKI-LEVWS 633
NG+ E+MN + LSN L K+ E V+ T Y++N SPS + K +EVWS
Sbjct: 626 QQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWS 685
Query: 632 GHNVNYS*L*IF*YDAYSHVQLVERDKQDQRVKKCTFVLYSDGVKGCRLYDWVTRKIIIS 453
G NYS L +F AY+H V+ K + R KC F+ Y GVKG +L+ T+K++IS
Sbjct: 686 GSPANYSDLRVFGCTAYAH---VDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 742
Query: 452 *DVRFDEDSLFH--KDERKELEKPKVINIEIK---------KKSIYR*NLSRP*VE---- 318
+V F E + H +E + +++++ +K N P +E
Sbjct: 743 RNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDS 802
Query: 317 --------QPLFRRNPPRDCKLPARYEDDSNI-AFSL-----ITNEGNPSTLQEALDGLV 180
+ + + P R+ K P RY +++NI A++L I PST EA+
Sbjct: 803 SIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDD 862
Query: 179 AKK*VAAMYDEMNSLYKNEICKLVKLSVGHKAISCK*I*NKKE 51
+ + AM+DEM SL KN + VKL K I CK I +KE
Sbjct: 863 CNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKE 905