BLASTX nr result
ID: Magnolia22_contig00020626
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00020626
(751 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CUR07519.1 rpoB (chloroplast) [Acacia tetragonophylla] 48 5e-07
CUR07246.1 rpoB (chloroplast) [Acacia tetragonophylla] CUR07337.... 48 5e-07
AKJ77639.1 RNA polymerase beta subunit (chloroplast) [Fagopyrum ... 48 5e-07
YP_009142042.1 RpoB (chloroplast) [Fagopyrum tataricum] AIX89735... 48 5e-07
YP_009234801.1 RNA polymerase beta subunit (chloroplast) [Stepha... 49 7e-07
YP_007476039.1 RNA polymerase beta subunit [Dasypogon bromeliifo... 48 7e-07
ADD31207.1 RNA polymerase beta subunit protein (chloroplast) [Pl... 47 9e-07
AFU95622.1 RpoB, partial (chloroplast) [Viola pubescens] 47 1e-06
CUR02793.1 rpoB (chloroplast) [Acacia gibbosa] 47 1e-06
YP_009326105.1 RNA polymerase beta subunit (chloroplast) [Oxyria... 47 1e-06
CUR07883.1 rpoB (chloroplast) [Acacia websteri] 47 1e-06
CUR07792.1 rpoB (chloroplast) [Acacia uncinella] 47 1e-06
CUR07701.1 rpoB (chloroplast) [Acacia umbraculiformis] 47 1e-06
CUR05611.1 rpoB (chloroplast) [Acacia resinimarginea] CUR05702.1... 47 1e-06
CUR05338.1 rpoB (chloroplast) [Acacia prainii] 47 1e-06
CUR04700.1 rpoB (chloroplast) [Acacia murrayana] CUR04791.1 rpoB... 47 1e-06
CUR04518.1 rpoB (chloroplast) [Acacia merrallii] CUR04609.1 rpoB... 47 1e-06
CUR03883.1 rpoB (chloroplast) [Acacia lasiocalyx] CUR03974.1 rpo... 47 1e-06
CUR03427.1 rpoB (chloroplast) [Acacia jibberdingensis] CUR03518.... 47 1e-06
CUR03336.1 rpoB (chloroplast) [Acacia jennerae] 47 1e-06
>CUR07519.1 rpoB (chloroplast) [Acacia tetragonophylla]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN+ WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNSAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR07246.1 rpoB (chloroplast) [Acacia tetragonophylla] CUR07337.1 rpoB
(chloroplast) [Acacia tetragonophylla] CUR07428.1 rpoB
(chloroplast) [Acacia tetragonophylla]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN+ WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNSAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>AKJ77639.1 RNA polymerase beta subunit (chloroplast) [Fagopyrum cymosum]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 394 GVV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
G+V A YRQ+FL N WE +H SIFPFQYF
Sbjct: 495 GIVPARYRQEFLTNAWEEVHFRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>YP_009142042.1 RpoB (chloroplast) [Fagopyrum tataricum] AIX89735.1 RpoB
(chloroplast) [Fagopyrum tataricum] AOX13121.1 RNA
polymerase beta subunit (chloroplast) [Fagopyrum
tataricum]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 394 GVV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
G+V A YRQ+FL N WE +H SIFPFQYF
Sbjct: 495 GIVPARYRQEFLTNAWEEVHFRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>YP_009234801.1 RNA polymerase beta subunit (chloroplast) [Stephania japonica]
AMD08519.1 RNA polymerase beta subunit (chloroplast)
[Stephania japonica]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 7e-07
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYFLL 489
VV A YRQ+FL WEHIHL SIFPFQYF L
Sbjct: 496 VVPARYRQEFLTIAWEHIHLRSIFPFQYFSL 526
Score = 33.1 bits (74), Expect(2) = 7e-07
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FS+G LIPFI+HNDA
Sbjct: 519 FPFQYFSLGASLIPFIEHNDA 539
>YP_007476039.1 RNA polymerase beta subunit [Dasypogon bromeliifolius] AFB18330.1
RNA polymerase beta subunit (plastid) [Dasypogon
bromeliifolius] AGE93104.1 RNA polymerase beta subunit
(plastid) [Dasypogon bromeliifolius]
Length = 1070
Score = 47.8 bits (112), Expect(2) = 7e-07
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FL WEHIHL SIFPFQYF
Sbjct: 496 VVPARYRQEFLTIAWEHIHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 7e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>ADD31207.1 RNA polymerase beta subunit protein (chloroplast) [Plumbago
auriculata]
Length = 1067
Score = 47.4 bits (111), Expect(2) = 9e-07
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 361 SLRRS*YIR*AGVV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
SL S I+ GVV A YRQ+FL + WE +H SIFPFQYF
Sbjct: 484 SLALSQGIQEEGVVPARYRQEFLTSAWEQVHFRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 9e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>AFU95622.1 RpoB, partial (chloroplast) [Viola pubescens]
Length = 1103
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 509 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 537
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 532 FPFQYFSIGASLIPFIEHNDA 552
>CUR02793.1 rpoB (chloroplast) [Acacia gibbosa]
Length = 1072
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 498 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 526
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 521 FPFQYFSIGASLIPFIEHNDA 541
>YP_009326105.1 RNA polymerase beta subunit (chloroplast) [Oxyria sinensis]
APD26334.1 RNA polymerase beta subunit (chloroplast)
[Oxyria sinensis]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 394 GVV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
GVV A YRQ+FL + WE +H SIFPFQYF
Sbjct: 495 GVVPARYRQEFLTSAWEEVHFRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR07883.1 rpoB (chloroplast) [Acacia websteri]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR07792.1 rpoB (chloroplast) [Acacia uncinella]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR07701.1 rpoB (chloroplast) [Acacia umbraculiformis]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR05611.1 rpoB (chloroplast) [Acacia resinimarginea] CUR05702.1 rpoB
(chloroplast) [Acacia resinimarginea] CUR05793.1 rpoB
(chloroplast) [Acacia resinimarginea]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR05338.1 rpoB (chloroplast) [Acacia prainii]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR04700.1 rpoB (chloroplast) [Acacia murrayana] CUR04791.1 rpoB (chloroplast)
[Acacia murrayana]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR04518.1 rpoB (chloroplast) [Acacia merrallii] CUR04609.1 rpoB (chloroplast)
[Acacia merrallii]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR03883.1 rpoB (chloroplast) [Acacia lasiocalyx] CUR03974.1 rpoB
(chloroplast) [Acacia lasiocalyx] CUR04156.1 rpoB
(chloroplast) [Acacia longiphyllodinea] CUR04247.1 rpoB
(chloroplast) [Acacia longiphyllodinea]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR03427.1 rpoB (chloroplast) [Acacia jibberdingensis] CUR03518.1 rpoB
(chloroplast) [Acacia jibberdingensis]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539
>CUR03336.1 rpoB (chloroplast) [Acacia jennerae]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 397 VV*A*YRQKFLNNVWEHIHLPSIFPFQYF 483
VV A YRQ+FLN WE +HL SIFPFQYF
Sbjct: 496 VVPARYRQEFLNIAWEQVHLRSIFPFQYF 524
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 465 FSFPIFSIGDPLIPFIKHNDA 527
F F FSIG LIPFI+HNDA
Sbjct: 519 FPFQYFSIGASLIPFIEHNDA 539