BLASTX nr result

ID: Magnolia22_contig00018253 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00018253
         (513 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018812085.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   4e-07
XP_010524251.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   9e-06

>XP_018812085.1 PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Juglans regia]
          Length = 646

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/116 (28%), Positives = 60/116 (51%)
 Frame = +2

Query: 161 HSLNPLPSLIKTHKSPLSPTLHRSAIVASILHQNPTRAFFSFIQLTLCDRWTDPTTXXXX 340
           +++  L   ++T K  LS +++RS I + I+ +    AF  F + +       P      
Sbjct: 100 NAIGTLLKQVRTQKINLSSSVYRSLIASLIIGKKTHDAFLVFSEASSVIPEIGPEVCNSL 159

Query: 341 XXXXXXXGHFEFSKIVFDTMVFRKTALSNVGFGVFTNAFSRVMELEKILHLVDETK 508
                  G+ E+++ VFD MV +  + S +GFGVF   FSR +E++++L  +DE +
Sbjct: 160 LAALASDGYLEYAETVFDKMVVKGVSFSTLGFGVFIWRFSRNLEVDRVLSKLDEVR 215


>XP_010524251.1 PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Tarenaya hassleriana] XP_010524252.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g14080
           [Tarenaya hassleriana] XP_010524255.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g14080
           [Tarenaya hassleriana] XP_010524256.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g14080
           [Tarenaya hassleriana]
          Length = 642

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 33/115 (28%), Positives = 57/115 (49%)
 Frame = +2

Query: 164 SLNPLPSLIKTHKSPLSPTLHRSAIVASILHQNPTRAFFSFIQLTLCDRWTDPTTXXXXX 343
           +++ L   +K+ K  L P +++S I + +L   P  AF+   ++    R   P       
Sbjct: 102 AMDVLLKQVKSQKIVLEPAVYQSLIDSLVLGGKPQSAFWVLDEVLSMGREMPPDVCNRLL 161

Query: 344 XXXXXXGHFEFSKIVFDTMVFRKTALSNVGFGVFTNAFSRVMELEKILHLVDETK 508
                 G  ++++ +FD M  R  AL+ +GFGV+   FSR  E  ++L LV+E K
Sbjct: 162 AALASDGCSDYAQHMFDEMCRRGIALNTLGFGVYVGRFSRNAETGRLLRLVEEVK 216


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