BLASTX nr result
ID: Magnolia22_contig00017956
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00017956
(492 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AEM44850.1 ribosomal protein S4, partial (plastid) [Eupomatia sp... 79 3e-15
AAP80890.1 small ribosomal protein 4, partial (chloroplast) [Mag... 79 4e-15
YP_007474538.1 ribosomal protein S4 (chloroplast) [Magnolia gran... 79 5e-15
YP_004769716.1 ribosomal protein S4 [Magnolia kwangsiensis] YP_0... 79 5e-15
AEM44848.1 ribosomal protein S4, partial (plastid) [Degeneria sp... 78 7e-15
YP_008993178.1 ribosomal protein S4 (chloroplast) [Magnolia cath... 77 3e-14
YP_007474372.1 ribosomal protein S4 (chloroplast) [Magnolia offi... 77 3e-14
YP_740204.1 ribosomal protein S4 [Liriodendron tulipifera] YP_00... 76 5e-14
AEM44851.1 ribosomal protein S4, partial (plastid) [Galbulimima ... 75 5e-14
AEM44844.1 ribosomal protein S4, partial (plastid) [Cryptocarya ... 75 7e-14
AAP80893.1 small ribosomal protein 4, partial (chloroplast) [Sas... 74 2e-13
CAA58937.1 ribosomal protein S4, partial (chloroplast) [Laurus n... 74 2e-13
YP_009298623.1 ribosomal protein S4 (chloroplast) [Phoebe omeien... 74 3e-13
YP_009171981.1 ribosomal protein S4 (chloroplast) [Machilus yunn... 74 3e-13
ALT16949.1 ribosomal protein S4 (chloroplast) [Endiandra globosa... 74 4e-13
YP_002836092.1 ribosomal protein S4 [Megaleranthis saniculifolia... 74 4e-13
AEM44871.1 ribosomal protein S4, partial (plastid) [Takhtajania ... 73 5e-13
AEM44857.1 ribosomal protein S4, partial (plastid) [Hydrastis ca... 72 7e-13
YP_009163019.1 ribosomal protein S4 (chloroplast) [Sinopodophyll... 73 7e-13
YP_009092305.1 ribosomal protein S4 (chloroplast) [Macadamia int... 73 7e-13
>AEM44850.1 ribosomal protein S4, partial (plastid) [Eupomatia sp. DES-2011]
Length = 176
Score = 78.6 bits (192), Expect = 3e-15
Identities = 42/58 (72%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 88 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 145
>AAP80890.1 small ribosomal protein 4, partial (chloroplast) [Magnolia
stellata]
Length = 189
Score = 78.6 bits (192), Expect = 4e-15
Identities = 42/58 (72%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 101 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 158
>YP_007474538.1 ribosomal protein S4 (chloroplast) [Magnolia grandiflora]
AEX98921.1 ribosomal protein S4 (chloroplast) [Magnolia
grandiflora] AEX99089.1 ribosomal protein S4
(chloroplast) [Magnolia grandiflora]
Length = 201
Score = 78.6 bits (192), Expect = 5e-15
Identities = 42/58 (72%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 170
>YP_004769716.1 ribosomal protein S4 [Magnolia kwangsiensis] YP_006576117.1
ribosomal protein S4 (chloroplast) [Magnolia denudata]
YP_008993264.1 ribosomal protein S4 (chloroplast)
[Magnolia dealbata] YP_008993350.1 ribosomal protein S4
(chloroplast) [Magnolia pyramidata] YP_008993436.1
ribosomal protein S4 (chloroplast) [Magnolia kobus]
YP_008993522.1 ribosomal protein S4 (chloroplast)
[Magnolia liliifera] YP_008993780.1 ribosomal protein S4
(chloroplast) [Magnolia sinica] YP_008993866.1 ribosomal
protein S4 (chloroplast) [Magnolia sprengeri]
YP_008993694.1 ribosomal protein S4 (chloroplast)
[Magnolia salicifolia] YP_009048289.1 30S ribosomal
protein S4 (chloroplast) [Magnolia yunnanensis]
ADL39058.1 ribosomal protein S4 (chloroplast) [Magnolia
kwangsiensis] AEM65220.1 ribosomal protein S4
(chloroplast) [Magnolia denudata] AEX98253.1 ribosomal
protein S4 (chloroplast) [Magnolia liliiflora]
AEX98336.1 ribosomal protein S4 (chloroplast) [Magnolia
denudata] AFP92311.1 ribosomal protein S4 (chloroplast)
[Magnolia acuminata var. acuminata] AFP92483.1 ribosomal
protein S4 (chloroplast) [Magnolia dealbata] AFP92569.1
ribosomal protein S4 (chloroplast) [Magnolia denudata]
AFP92655.1 ribosomal protein S4 (chloroplast) [Magnolia
pyramidata] AFP92741.1 ribosomal protein S4
(chloroplast) [Magnolia kobus] AFP92827.1 ribosomal
protein S4 (chloroplast) [Magnolia liliifera] AFP92999.1
ribosomal protein S4 (chloroplast) [Magnolia
salicifolia] AFP93085.1 ribosomal protein S4
(chloroplast) [Magnolia sinica] AFP93171.1 ribosomal
protein S4 (chloroplast) [Magnolia sprengeri] AHF72120.1
30S ribosomal protein S4 (chloroplast) [Magnolia
yunnanensis]
Length = 201
Score = 78.6 bits (192), Expect = 5e-15
Identities = 42/58 (72%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 170
>AEM44848.1 ribosomal protein S4, partial (plastid) [Degeneria sp. DES-2011]
Length = 184
Score = 77.8 bits (190), Expect = 7e-15
Identities = 41/54 (75%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTF 362
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF
Sbjct: 96 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTF 149
>YP_008993178.1 ribosomal protein S4 (chloroplast) [Magnolia cathcartii]
YP_008993608.1 ribosomal protein S4 (chloroplast)
[Magnolia odora] AFP92397.1 ribosomal protein S4
(chloroplast) [Magnolia cathcartii] AFP92913.1 ribosomal
protein S4 (chloroplast) [Magnolia odora]
Length = 201
Score = 76.6 bits (187), Expect = 3e-14
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIV+I SY CKPRDI TTRDEQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 113 HRHILVNGRIVNIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 170
>YP_007474372.1 ribosomal protein S4 (chloroplast) [Magnolia officinalis]
YP_007474454.1 ribosomal protein S4 (chloroplast)
[Magnolia officinalis subsp. biloba] YP_009026883.1
ribosomal protein S4 (plastid) [Magnolia tripetala]
AEX98504.1 ribosomal protein S4 (chloroplast) [Magnolia
officinalis] AEX98586.1 ribosomal protein S4
(chloroplast) [Magnolia officinalis subsp. biloba]
AEX98670.1 ribosomal protein S4 (chloroplast) [Magnolia
officinalis subsp. biloba] AEX98754.1 ribosomal protein
S4 (chloroplast) [Magnolia officinalis subsp. biloba]
AHW51960.1 ribosomal protein S4 (plastid) [Magnolia
tripetala]
Length = 201
Score = 76.6 bits (187), Expect = 3e-14
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQN+IDSSP ELAK+ TF S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNHIDSSPHEELAKHLTFHSSQ 170
>YP_740204.1 ribosomal protein S4 [Liriodendron tulipifera] YP_009261482.1
ribosomal protein S4 (chloroplast) [Liriodendron
chinense] Q0G9L7.1 RecName: Full=30S ribosomal protein
S4, chloroplastic ABI32511.1 ribosomal protein S4
(chloroplast) [Liriodendron tulipifera] ANN44732.1
ribosomal protein S4 (chloroplast) [Liriodendron
chinense]
Length = 201
Score = 75.9 bits (185), Expect = 5e-14
Identities = 41/58 (70%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTR EQRSRALIQNYIDSSP ELAK+ TF S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRGEQRSRALIQNYIDSSPHEELAKHLTFHSSQ 170
>AEM44851.1 ribosomal protein S4, partial (plastid) [Galbulimima belgraveana]
Length = 184
Score = 75.5 bits (184), Expect = 5e-14
Identities = 40/54 (74%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTF 362
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNYIDS P ELAK+ TF
Sbjct: 96 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSYPQEELAKHLTF 149
>AEM44844.1 ribosomal protein S4, partial (plastid) [Cryptocarya alba]
Length = 180
Score = 75.1 bits (183), Expect = 7e-14
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRD+QRSRALIQNY+DSSP +LAK+ TF S +
Sbjct: 92 HRHILVNGRIVDIPSYRCKPRDIITTRDKQRSRALIQNYLDSSPREDLAKHLTFHSSQ 149
>AAP80893.1 small ribosomal protein 4, partial (chloroplast) [Sassafras
albidum]
Length = 184
Score = 73.9 bits (180), Expect = 2e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + R+VDI SY CKPRDI T RDEQRSRALIQNY+DSSP +LAK+ TF S +
Sbjct: 96 HRHILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQ 153
>CAA58937.1 ribosomal protein S4, partial (chloroplast) [Laurus nobilis]
Length = 196
Score = 73.9 bits (180), Expect = 2e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + R+VDI SY CKPRDI T RDEQRSRALIQNY+DSSP +LAK+ TF S +
Sbjct: 113 HRHILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQ 170
>YP_009298623.1 ribosomal protein S4 (chloroplast) [Phoebe omeiensis]
YP_009298704.1 ribosomal protein S4 (chloroplast)
[Phoebe sheareri] AON77986.1 ribosomal protein S4
(chloroplast) [Phoebe omeiensis] AON78067.1 ribosomal
protein S4 (chloroplast) [Phoebe sheareri]
Length = 201
Score = 73.9 bits (180), Expect = 3e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + R+VDI SY CKPRDI T RDEQRSRALIQNY+DSSP +LAK+ TF S +
Sbjct: 113 HRHILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQ 170
>YP_009171981.1 ribosomal protein S4 (chloroplast) [Machilus yunnanensis]
YP_009172062.1 ribosomal protein S4 (chloroplast)
[Machilus balansae] YP_009298542.1 ribosomal protein S4
(chloroplast) [Persea americana] AKU70976.1 ribosomal
protein S4 (chloroplast) [Cinnamomum micranthum f.
kanehirae] ALF35686.1 ribosomal protein S4 (chloroplast)
[Machilus yunnanensis] ALF35767.1 ribosomal protein S4
(chloroplast) [Machilus balansae] ANP25802.1 ribosomal
protein S4 (chloroplast) [Litsea glutinosa] AON77905.1
ribosomal protein S4 (chloroplast) [Persea americana]
Length = 201
Score = 73.9 bits (180), Expect = 3e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + R+VDI SY CKPRDI T RDEQRSRALIQNY+DSSP +LAK+ TF S +
Sbjct: 113 HRHILVNGRVVDIPSYRCKPRDIITARDEQRSRALIQNYLDSSPREDLAKHLTFDSSQ 170
>ALT16949.1 ribosomal protein S4 (chloroplast) [Endiandra globosa] ALT17033.1
ribosomal protein S4 (chloroplast) [Endiandra discolor]
Length = 201
Score = 73.6 bits (179), Expect = 4e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRD+QRSRALIQNY+DSSP + AK+ TF S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDKQRSRALIQNYLDSSPREDFAKHLTFHSSQ 170
>YP_002836092.1 ribosomal protein S4 [Megaleranthis saniculifolia] YP_009317801.1
ribosomal protein S4 (chloroplast) [Trollius chinensis]
ACO92017.1 ribosomal protein S4 (chloroplast)
[Megaleranthis saniculifolia] AOY40657.1 ribosomal
protein S4 (chloroplast) [Trollius chinensis]
Length = 201
Score = 73.6 bits (179), Expect = 4e-13
Identities = 39/58 (67%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQRSRALIQNY+DSSP EL K+ T S +
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSSPHEELPKHLTLHSSQ 170
>AEM44871.1 ribosomal protein S4, partial (plastid) [Takhtajania perrieri]
Length = 184
Score = 72.8 bits (177), Expect = 5e-13
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKP+DI TTRDEQRSRALIQNY+DSSP ELAK+ + S +
Sbjct: 96 HRHILVNGRIVDIPSYRCKPQDIITTRDEQRSRALIQNYMDSSPHEELAKHLSLYSSQ 153
>AEM44857.1 ribosomal protein S4, partial (plastid) [Hydrastis canadensis]
Length = 182
Score = 72.4 bits (176), Expect = 7e-13
Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQ+SRALIQNY+DSSP EL K+ T S +
Sbjct: 94 HRHILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQ 151
>YP_009163019.1 ribosomal protein S4 (chloroplast) [Sinopodophyllum hexandrum]
AKT94079.1 ribosomal protein S4 (chloroplast)
[Sinopodophyllum hexandrum] ALT14383.1 ribosomal protein
S4 (chloroplast) [Sinopodophyllum hexandrum]
Length = 201
Score = 72.8 bits (177), Expect = 7e-13
Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLSRE 374
HR + RIVDI SY CKPRDI TTRDEQ+SRALIQNY+DSSP EL K+ T S +
Sbjct: 113 HRHVLVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQ 170
>YP_009092305.1 ribosomal protein S4 (chloroplast) [Macadamia integrifolia]
AHB38161.1 ribosomal protein S4 (chloroplast) [Macadamia
integrifolia]
Length = 201
Score = 72.8 bits (177), Expect = 7e-13
Identities = 38/56 (67%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = +3
Query: 207 HRKPMDTSRIVDITSYCCKPRDISTTRDEQRSRALIQNYIDSSP--ELAKYFTFLS 368
HR + RIVDI SY CKPRDI TTRDEQ+SRALIQNY+DSSP E K+ TF S
Sbjct: 113 HRHILVNGRIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEEFPKHLTFHS 168