BLASTX nr result
ID: Magnolia22_contig00017090
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00017090
(4601 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ALX72770.1 polyprotein [Nectarine virus M] 1637 0.0
YP_009222597.1 polyprotein [Nectarine virus M] ALX72768.1 polypr... 1630 0.0
ALX72769.1 polyprotein [Nectarine virus M] 1627 0.0
ACV53023.1 polyprotein [Blackberry virus S] 1598 0.0
YP_224218.1 replicase-associated polyprotein [Citrus sudden deat... 1568 0.0
ABA54133.1 polyprotein [Citrus sudden death-associated virus] 1563 0.0
NP_044447.1 replicase-associated polyprotein [Oat blue dwarf vir... 1560 0.0
ADD13602.1 replicase-associated polyprotein [Oat blue dwarf virus] 1557 0.0
YP_009315883.1 ORF1 polyprotein [Grapevine asteroid mosaic-assoc... 1545 0.0
AIY22517.1 replicase polyprotein [Maize rayado fino virus] 1514 0.0
YP_004464920.1 polyprotein [Switchgrass mosaic virus] AEE25899.3... 1511 0.0
NP_115454.1 polyprotein [Maize rayado fino virus] Q91TW9.1 RecNa... 1510 0.0
AQQ11758.1 replicase polyprotein [Peach virus D] 1472 0.0
AOX49247.1 polyprotein, partial [Grapevine rupestris vein feathe... 1436 0.0
ANP94321.1 putative 230 kDa polyprotein [Grapevine Syrah virus 1] 1404 0.0
YP_002756536.1 putative 230 kDa polyprotein [Grapevine Syrah vir... 1404 0.0
AKQ08148.1 polyprotein [Grapevine Syrah virus 1] 1404 0.0
AKQ08147.1 polyprotein [Grapevine Syrah virus 1] 1402 0.0
AKQ08149.1 polyprotein [Grapevine Syrah virus 1] 1399 0.0
ACV83739.1 replicase-associated polyprotein [Grapevine virus Q] 1397 0.0
>ALX72770.1 polyprotein [Nectarine virus M]
Length = 2137
Score = 1637 bits (4240), Expect = 0.0
Identities = 841/1360 (61%), Positives = 1000/1360 (73%), Gaps = 11/1360 (0%)
Frame = +2
Query: 353 DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLIAI 532
D E + L DPS GP++ +A L+PG+Y+PG+G F +R S +AP PYP DCLL+A+
Sbjct: 784 DSETSPLLRDPSACGPVAMYAELHPGNYVPGTGLFQFRDRASGRAPVPYPS-MDCLLVAV 842
Query: 533 SEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHSQI 712
+AT + ALW+TL S PDS ++ EIS GLSTDHF +LAR YSLR TFHS +
Sbjct: 843 EQATRLPKEALWDTLTSACPDSFLNPTEISATGLSTDHFAILARHYSLRATFHSGPSTFT 902
Query: 713 MGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHLAEDLASSAFNFRCQGNLLPF 892
+GM DATS+FAI H GHF+L +P G LA+DLA +A F G LLP
Sbjct: 903 IGMEDATSTFAINHTPGQGKLPGHFSLRLDHNSPKLNGGLAQDLAVAALRFNVDGQLLPI 962
Query: 893 RTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAESRRIRL 1072
R+VH Y S RAKNLISNMKNGFDGV+ANI P T EAR+R+L+LDG +DIA+ R +RL
Sbjct: 963 RSVHNYRSWPARAKNLISNMKNGFDGVMANIHPTKTTEARERILALDGQLDIAQPRTVRL 1022
Query: 1073 IHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLGTWESS 1252
IHIAGFPGCGKSYPI +LLKT AF + K++VPT ELR+EWKD ++ PA+ WRLGTWESS
Sbjct: 1023 IHIAGFPGCGKSYPISRLLKTAAFKDHKVAVPTTELRSEWKDMLKPSPANVWRLGTWESS 1082
Query: 1253 LLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNSRILSE 1432
LLK+ARVLVIDEIYK+PRGYLDLAIHAD +E VIALGDPLQGEYHS++PNSSNSR++ E
Sbjct: 1083 LLKAARVLVIDEIYKLPRGYLDLAIHADPTVEFVIALGDPLQGEYHSTHPNSSNSRLVGE 1142
Query: 1433 IRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQASMKT 1612
RHL P++D YC WS RVP+ IA F VP+SN PGFA Y + P + R+LTNSQ +M T
Sbjct: 1143 TRHLAPYLDYYCLWSRRVPKLIADFFHVPTSNENPGFARYSRQFPTDTRVLTNSQNAMHT 1202
Query: 1613 LNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGDKSLLD 1792
+N CG+ + TIASSQGSTY GAA IHLDKNS LLSH HSLVA+TRSR+GI+FTGD SLL
Sbjct: 1203 MNQCGYQSVTIASSQGSTYSGAACIHLDKNSALLSHGHSLVALTRSRTGIIFTGDPSLLK 1262
Query: 1793 GTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQFTADP 1972
G STSN +FS LM + ++ F EFP CP++ PLK R LSG+ R + DP
Sbjct: 1263 GASTSNTMFSLLMSGKTRPIQDWFHREFPTCPVLKEPLKQRHNRLSGA----RGETLPDP 1318
Query: 1973 HSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLAS 2152
+ + RL+++ I P DV I + + LGDGS N P V F+PE RRPLH DL S
Sbjct: 1319 YLRAIPIRLSSSPCIKPTEVRDV-ISVDSVVLGDGSLNRPQVSTHFLPEARRPLHSDLPS 1377
Query: 2153 AVPSVISLASARCSATPI-EPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLD 2329
AVPS S+ TP+ EPVYPG +E++AA F+PAHDP +EI +++ +SNQFP+L+
Sbjct: 1378 AVPSSELAPSSADFTTPVHEPVYPGETFENLAAHFLPAHDPETREIVFRNTMSNQFPHLN 1437
Query: 2330 VPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGL 2509
F +SAQP SL+AA+H+ K+D TLLPASI KRLRFR SD+PY I+ +DE+LGQLL+EG
Sbjct: 1438 KDFHLSAQPSSLIAAIHSEKDDPTLLPASIGKRLRFRPSDAPYQITSKDEILGQLLYEGW 1497
Query: 2510 CRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSK 2689
CRAY R+PNA PFD LFAECI+LNEYAQL+SKTQAVIMGNA RSDPDWR+SAVRIFSK
Sbjct: 1498 CRAYSRNPNAEEPFDEALFAECINLNEYAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSK 1557
Query: 2690 TQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQ 2869
QHKVNEGS+FGSWKACQTLALMHD VVL+LGPVKKYQR+FD DRP H+YIHAG+TP +
Sbjct: 1558 AQHKVNEGSIFGSWKACQTLALMHDAVVLILGPVKKYQRMFDQRDRPSHLYIHAGHTPTE 1617
Query: 2870 LSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVST 3049
+S WC+ +LT +V LANDYT+FDQSQHGEAVV ERKKMERL+IP HLIDLH LK NVST
Sbjct: 1618 MSSWCKRNLTTAVKLANDYTSFDQSQHGEAVVFERKKMERLNIPQHLIDLHCFLKTNVST 1677
Query: 3050 QFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTA 3229
QFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EYA A P MVSGDDSLLD+EP+ R EW A
Sbjct: 1678 QFGPLTCMRLTGEPGTYDDNSDYNLAVINLEYAASAVPTMVSGDDSLLDYEPKVRPEWNA 1737
Query: 3230 VKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEF 3409
+KPLLALRFKKER YATFCGYY G VRSP+ALFAK+ IA DD SISDK+ASYL EF
Sbjct: 1738 IKPLLALRFKKERGLYATFCGYYCARVGCVRSPIALFAKLMIAEDDGSISDKLASYLMEF 1797
Query: 3410 SIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKW 3589
SIGHSLGD+ WQ LP+ V +QSA FDFFCR A E K+AL+LGEV E ++ R+ KW
Sbjct: 1798 SIGHSLGDELWQALPLSTVSYQSACFDFFCRRAPPELKLALKLGEVPEEVVARI-GHFKW 1856
Query: 3590 IANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ---PSEXXXXXXXXX 3760
+AT+SLL SA R +LHSSR RSLPEDP+ + QG+LL++ Q PS
Sbjct: 1857 ATHATYSLLNSAARQILLHSSRNPRSLPEDPDTTKYQGELLQTLQLSAPSHSMNHSTLLP 1916
Query: 3761 XXXXXXXXXXXXXXXNLSMAHHENLGG----GAPP--DSRVVAQPPLPLAPKISETP-PG 3919
S A +++ G PP D RV QP LPLAP+++E
Sbjct: 1917 LTGGSSSSAPALTSLQFSEAVTQSMANDGQVGPPPDRDDRVDRQPRLPLAPRVAEVDLQA 1976
Query: 3920 PYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSK 4099
P VD PFQW S DG T DLA S T+ LTA YRHAELRSVE E P AAAFSK
Sbjct: 1977 PTVDYPFQWVISSYDGSAAKNLTEDLAGSATLSKLTANYRHAELRSVELEVAPLAAAFSK 2036
Query: 4100 PLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAF 4279
P+SISVVWTIASITPAT ET YYGGR +TVGGPVLL ST +PADL+RLNPI+K+SV +
Sbjct: 2037 PISISVVWTIASITPATTTETSYYGGRLITVGGPVLLSSTTRIPADLSRLNPILKSSVGY 2096
Query: 4280 ADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
DTPRLS+T Y+NSGT G L V++RGI+RLS PAGN L
Sbjct: 2097 KDTPRLSYTVYANSGTAGTNLCSVIIRGILRLSAPAGNIL 2136
>YP_009222597.1 polyprotein [Nectarine virus M] ALX72768.1 polyprotein [Nectarine
virus M]
Length = 2055
Score = 1630 bits (4222), Expect = 0.0
Identities = 834/1360 (61%), Positives = 995/1360 (73%), Gaps = 11/1360 (0%)
Frame = +2
Query: 353 DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLIAI 532
DPE + L DPS GP++ ++ L+PG+Y+PG+G F +R S +AP PYP DCLL+A+
Sbjct: 702 DPESSPLLRDPSACGPVAMYSELHPGNYVPGTGLFQFRDRASGRAPVPYPS-MDCLLVAV 760
Query: 533 SEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHSQI 712
+AT + ALW+TL S PDS ++ EI+ GLSTDHF +LAR YSLR TFHS +
Sbjct: 761 EQATRLPKEALWDTLTSACPDSFLNPTEIAAAGLSTDHFAILARHYSLRATFHSGPSTFT 820
Query: 713 MGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHLAEDLASSAFNFRCQGNLLPF 892
+GM DATS+FAI H GHF+L +P G LA+DLA +A F G LLP
Sbjct: 821 IGMEDATSTFAINHTPGQGKLPGHFSLRLDHNSPKLNGGLAQDLAVAALRFNVDGQLLPI 880
Query: 893 RTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAESRRIRL 1072
R+VH+Y + RAKNLISNMKNGFDGV+ANI P T EAR+R+L+LDG +DIA+ R +RL
Sbjct: 881 RSVHSYRTWPARAKNLISNMKNGFDGVMANIHPTKTTEARERILALDGQLDIAQPRTVRL 940
Query: 1073 IHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLGTWESS 1252
IHIAGFPGCGKSYPI +LLKT AF + K++VPT ELR EWKD ++ PA WRLGTWESS
Sbjct: 941 IHIAGFPGCGKSYPISRLLKTAAFKDHKVAVPTTELRAEWKDMLKPSPAHVWRLGTWESS 1000
Query: 1253 LLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNSRILSE 1432
LLK+ARVLVIDEIYK+PRGYLDLAIHAD IE VIALGDPLQGEYHS++PNSSNSR++ E
Sbjct: 1001 LLKAARVLVIDEIYKLPRGYLDLAIHADPTIEFVIALGDPLQGEYHSTHPNSSNSRLVGE 1060
Query: 1433 IRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQASMKT 1612
RHL P++D YC WS RVP+ IA F VP+SN PGFA Y + P + R+LTNSQ +M T
Sbjct: 1061 TRHLAPYLDYYCLWSRRVPKLIADFFHVPTSNENPGFARYSRQFPTDARVLTNSQNAMHT 1120
Query: 1613 LNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGDKSLLD 1792
+N CG+ + TIASSQGSTY GAA IHLDKNS LLSH HSLVA+TRSR+G++FTGD SLL
Sbjct: 1121 MNQCGYQSVTIASSQGSTYSGAACIHLDKNSALLSHGHSLVALTRSRTGVIFTGDPSLLK 1180
Query: 1793 GTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQFTADP 1972
G STSN +FS LM + ++ F EFP CP++ PLK R L+G+ + DP
Sbjct: 1181 GASTSNTMFSLLMSGKTRPIQDWFHREFPTCPVLKEPLKQRHNRLTGAHG----ETLTDP 1236
Query: 1973 HSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLAS 2152
+ L L RL+++ I P D+ I LGDG+ N P V F+PE RRPLH DL S
Sbjct: 1237 YCLALPIRLSSSPCIKPTEVSDI-ISADTVVLGDGALNRPQVSTHFLPEARRPLHSDLPS 1295
Query: 2153 AVPSVISLASARCSATPI-EPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLD 2329
AVPS S+ TP+ EPVYPG +E++AA F+PAHDP +EI +++ +SNQFP+L+
Sbjct: 1296 AVPSSELSPSSADFTTPVHEPVYPGETFENLAAHFLPAHDPETREIVFRNTMSNQFPHLN 1355
Query: 2330 VPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGL 2509
F +SAQP SL+AA+H+ K+D TLLPASI KRLRFR SD+PY I+ +DE+LGQLL+EG
Sbjct: 1356 KDFHLSAQPSSLIAAIHSEKDDPTLLPASIGKRLRFRPSDAPYQITSKDEILGQLLYEGW 1415
Query: 2510 CRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSK 2689
CRAY R+PNA PFD LFAECI+LNEYAQL+SKTQAVIMGNA RSDPDWR+SAVRIFSK
Sbjct: 1416 CRAYSRNPNAEEPFDEALFAECINLNEYAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSK 1475
Query: 2690 TQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQ 2869
QHKVNEGS+FGSWKACQTLALMHD VVL+LGPVKKYQR+FD DRP H+YIHAG+TP +
Sbjct: 1476 AQHKVNEGSIFGSWKACQTLALMHDAVVLILGPVKKYQRMFDQRDRPSHLYIHAGHTPTE 1535
Query: 2870 LSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVST 3049
+S WC+ +LT +V LANDYT+FDQSQHGEAVV ERKKMERL+IP HLIDLH LK NVST
Sbjct: 1536 MSTWCKKNLTTAVKLANDYTSFDQSQHGEAVVFERKKMERLNIPQHLIDLHCFLKTNVST 1595
Query: 3050 QFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTA 3229
QFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EYA A P MVSGDDSLLD+EP+ R EW A
Sbjct: 1596 QFGPLTCMRLTGEPGTYDDNSDYNLAVINLEYAASAVPTMVSGDDSLLDYEPKVRPEWNA 1655
Query: 3230 VKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEF 3409
+KPLLALRFKKER YATFCGYY G VRSP+ALFAK+ IA DD SISDK+ASYL EF
Sbjct: 1656 IKPLLALRFKKERGLYATFCGYYCARVGCVRSPIALFAKLMIAEDDGSISDKLASYLMEF 1715
Query: 3410 SIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKW 3589
SIGHSLGD+ WQ LP+ V +QSA FDFFCR A E K+AL+LGEV E ++ R+ KW
Sbjct: 1716 SIGHSLGDELWQALPLATVSYQSACFDFFCRRAPPELKLALKLGEVPEEVVARI-GHFKW 1774
Query: 3590 IANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ---------PSEXXX 3742
+AT+SLL SA R +LHSSR RSLPEDP+ + QG+LL++ Q S
Sbjct: 1775 ATHATYSLLNSAARQILLHSSRNPRSLPEDPDTTKYQGELLQTLQLSAPLHSMNHSTLLP 1834
Query: 3743 XXXXXXXXXXXXXXXXXXXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKISETP-PG 3919
SMA + +G D RV QP LP+AP+++E
Sbjct: 1835 LTGGSSASAPSLTPLQFSEAVTQSMASNGQVGPPPDRDDRVDRQPRLPVAPRVAEVDLQA 1894
Query: 3920 PYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSK 4099
P VD PFQW S DG T DLA S T+ LTA YRHAELRSVE E P AAAFSK
Sbjct: 1895 PTVDYPFQWVISSYDGSAAKNLTEDLAGSATLSKLTANYRHAELRSVELEVAPLAAAFSK 1954
Query: 4100 PLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAF 4279
P+SISVVWTIASITPAT ET YYGGR +TVGGPVLL ST +PADL+RLNPI+K+SV +
Sbjct: 1955 PISISVVWTIASITPATTTETSYYGGRLITVGGPVLLSSTTRIPADLSRLNPILKSSVGY 2014
Query: 4280 ADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
DTPRLS+T Y+NSGT G L V++RGI+RLS PAGN L
Sbjct: 2015 KDTPRLSYTVYANSGTAGTNLCSVIIRGILRLSAPAGNIL 2054
>ALX72769.1 polyprotein [Nectarine virus M]
Length = 2055
Score = 1627 bits (4213), Expect = 0.0
Identities = 832/1360 (61%), Positives = 994/1360 (73%), Gaps = 11/1360 (0%)
Frame = +2
Query: 353 DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLIAI 532
DPE + L DPS GP++ ++ L+PG+Y+PG+G F +R S +AP PYP DCLL+A+
Sbjct: 702 DPESSPLLRDPSACGPVAMYSELHPGNYVPGTGLFQFRDRASGRAPVPYPS-MDCLLVAV 760
Query: 533 SEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHSQI 712
+AT + ALW+TL S PDS ++ EI+ GLSTDHF +LAR YSLR TFHS +
Sbjct: 761 EQATRLPKEALWDTLTSACPDSFLNPTEIAAAGLSTDHFAILARHYSLRATFHSGPSTFT 820
Query: 713 MGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHLAEDLASSAFNFRCQGNLLPF 892
+GM DATS+FAI H GHF+L +P G LA+DLA +A F G LLP
Sbjct: 821 IGMEDATSTFAINHTPGQGKLPGHFSLRLDHNSPKLNGGLAQDLAVAALRFNVDGQLLPI 880
Query: 893 RTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAESRRIRL 1072
R+VH+Y + RAKNLISNMKNGFDGV+ANI P T EAR+R+L+LDG +DIA+ R +RL
Sbjct: 881 RSVHSYRTWPARAKNLISNMKNGFDGVMANIHPTKTTEARERILALDGQLDIAQPRTVRL 940
Query: 1073 IHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLGTWESS 1252
IHIAGFPGCGKSYPI +LLKT AF + K++VPT ELR EWKD ++ PA WRLGTWESS
Sbjct: 941 IHIAGFPGCGKSYPISRLLKTAAFKDHKVAVPTTELRAEWKDMLKPSPAHVWRLGTWESS 1000
Query: 1253 LLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNSRILSE 1432
LLK+ARVLVIDEIYK+PRGYLDLAIHAD +E VIALGDPLQGEYHS+ P+SSNSR++ E
Sbjct: 1001 LLKAARVLVIDEIYKLPRGYLDLAIHADPTVEFVIALGDPLQGEYHSTYPSSSNSRLVGE 1060
Query: 1433 IRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQASMKT 1612
RHL P++D YC WS RVP+ IA F VP+SN PGFA Y + P + R+LTNSQ +M T
Sbjct: 1061 TRHLAPYLDYYCLWSRRVPKLIADFFHVPTSNENPGFARYSRQFPTDARVLTNSQNAMHT 1120
Query: 1613 LNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGDKSLLD 1792
+N CG+ + TIASSQGSTY GAA IHLDKNS LLSH HSLVA+TRSR+G++FTGD SLL
Sbjct: 1121 MNQCGYQSVTIASSQGSTYSGAACIHLDKNSALLSHGHSLVALTRSRTGVIFTGDPSLLK 1180
Query: 1793 GTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQFTADP 1972
G STSN +FS LM + ++ F EFP CP++ PLK R L+G+ + DP
Sbjct: 1181 GASTSNTMFSLLMSGKTRPIQDWFHREFPTCPVLKEPLKQRHNRLTGAHG----ETLPDP 1236
Query: 1973 HSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLAS 2152
+ L L RL+++ I P D+ I LGDG+ N P V F+PE RRPLH DL S
Sbjct: 1237 YCLALPIRLSSSPCIKPTEVSDI-ISADTVVLGDGALNRPQVSTHFLPEARRPLHSDLPS 1295
Query: 2153 AVPSVISLASARCSATPI-EPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLD 2329
AVPS S+ TP+ EPVYPG +E++AA F+PAHDP +EI +++ +SNQFP+L+
Sbjct: 1296 AVPSSELSPSSADFTTPVHEPVYPGETFENLAAHFLPAHDPETREIVFRNTMSNQFPHLN 1355
Query: 2330 VPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGL 2509
F +SAQP SL+AA+H+ K+D TLLPASI KRLRFR SD+PY I+ +DE+LGQLL+EG
Sbjct: 1356 KDFHLSAQPSSLIAAIHSEKDDPTLLPASIGKRLRFRPSDAPYQITSKDEILGQLLYEGW 1415
Query: 2510 CRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSK 2689
CRAY R+PNA PFD LFAECI+LNEYAQL+SKTQAVIMGNA RSDPDWR+SAVRIFSK
Sbjct: 1416 CRAYSRNPNAEEPFDEALFAECINLNEYAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSK 1475
Query: 2690 TQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQ 2869
QHKVNEGS+FGSWKACQTLALMHD VVL+LGPVKKYQR+FD DRP H+YIHAG+TP +
Sbjct: 1476 AQHKVNEGSIFGSWKACQTLALMHDAVVLILGPVKKYQRMFDQRDRPSHLYIHAGHTPTE 1535
Query: 2870 LSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVST 3049
+S WC+ +LT +V LANDYT+FDQSQHGEAVV ERKKMERL+IP HLIDLH LK NVST
Sbjct: 1536 MSTWCKKNLTTAVKLANDYTSFDQSQHGEAVVFERKKMERLNIPQHLIDLHCFLKTNVST 1595
Query: 3050 QFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTA 3229
QFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EYA A P MVSGDDSLLD+EP+ R EW A
Sbjct: 1596 QFGPLTCMRLTGEPGTYDDNSDYNLAVINLEYAASAVPTMVSGDDSLLDYEPKVRPEWNA 1655
Query: 3230 VKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEF 3409
+KPLLALRFKKER YATFCGYY G VRSP+ALFAK+ IA DD SISDK+ASYL EF
Sbjct: 1656 IKPLLALRFKKERGLYATFCGYYCARVGCVRSPIALFAKLMIAEDDGSISDKLASYLMEF 1715
Query: 3410 SIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKW 3589
SIGHSLGD+ WQ LP+ V +QSA FDFFCR A E K+AL+LGEV E ++ R+ KW
Sbjct: 1716 SIGHSLGDELWQALPLATVSYQSACFDFFCRRAPPELKLALKLGEVPEEVVARI-GHFKW 1774
Query: 3590 IANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ---------PSEXXX 3742
+AT+SLL SA R +LHSSR RSLPEDP+ + QG+LL++ Q S
Sbjct: 1775 ATHATYSLLNSAARQILLHSSRNPRSLPEDPDTTKYQGELLQTLQLSAPLHSMNHSTLLP 1834
Query: 3743 XXXXXXXXXXXXXXXXXXXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKISETP-PG 3919
SMA + +G D RV QP LP+AP+++E
Sbjct: 1835 LTGGSSASAPSLTPLQFSEAVTQSMASNGQVGPPPDRDDRVDRQPRLPVAPRVAEVDLQA 1894
Query: 3920 PYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSK 4099
P VD PFQW S DG T DLA S T+ LTA YRHAELRSVE E P AAAFSK
Sbjct: 1895 PTVDYPFQWVISSYDGSAAKNLTEDLAGSATLSKLTANYRHAELRSVELEVAPLAAAFSK 1954
Query: 4100 PLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAF 4279
P+SISVVWTIASITPAT ET YYGGR +TVGGPVLL ST +PADL+RLNPI+K+SV +
Sbjct: 1955 PISISVVWTIASITPATTTETSYYGGRLITVGGPVLLSSTTRIPADLSRLNPILKSSVGY 2014
Query: 4280 ADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
DTPRLS+T Y+NSGT G L V++RGI+RLS PAGN L
Sbjct: 2015 KDTPRLSYTVYANSGTAGTNLCSVIIRGILRLSAPAGNLL 2054
>ACV53023.1 polyprotein [Blackberry virus S]
Length = 2035
Score = 1598 bits (4139), Expect = 0.0
Identities = 806/1370 (58%), Positives = 1008/1370 (73%), Gaps = 8/1370 (0%)
Frame = +2
Query: 308 STGIVSTASPAQA-PLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSK 484
S+G+VS +PA P PE + L +D S +GP+ F+ L+PGSY+ +G F R S +
Sbjct: 678 SSGVVSNLTPAAPEPAAPEPSPLQADSSARGPVQLFSELFPGSYIGTTGAFNSRYRASGR 737
Query: 485 APTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLAR 664
APTPYP G DCLL+ I +AT I+ LWETLV+ LPD L++ EIS+ GLSTDHF VLA
Sbjct: 738 APTPYPAGTDCLLVTIEQATSISRRDLWETLVTNLPDCLLAPCEISKHGLSTDHFAVLAF 797
Query: 665 FYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLLHQ--APTPTSGGHLAE 838
FYSLR TF ++ +GMSDAT++F I H + MGHF+L HQ P PT G
Sbjct: 798 FYSLRVTFLTSHGPVDLGMSDATTNFRIDHQPESKDLMGHFSL-HQDSKPVPTLNGGTGS 856
Query: 839 DLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDR 1018
+LA++A F G LLPF TVHT+ + RAKNLISNMKNGFDGVLANIDP HT+ ARDR
Sbjct: 857 ELATAATRFNLDGCLLPFNTVHTFVTAPSRAKNLISNMKNGFDGVLANIDPHHTSTARDR 916
Query: 1019 LLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKD 1198
LL LDG++D+A+ RR+RL HIAGF GCGKSYPI +LLKTP F +K++VPTVELR EWKD
Sbjct: 917 LLCLDGIIDVAKPRRVRLFHIAGFAGCGKSYPIARLLKTPLFREFKVAVPTVELRAEWKD 976
Query: 1199 SMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQ 1378
+++ P ++WRL TWESSLLKSAR+LVIDE+YKMPRGY+DLA+HAD IE+VI LGDPLQ
Sbjct: 977 LLKIRPGAQWRLSTWESSLLKSARILVIDEVYKMPRGYVDLAVHADPTIELVILLGDPLQ 1036
Query: 1379 GEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRP 1558
G YHS++P+S+NSR+ E +L ++D YC WS R+PQ++A F V S+N APGF+ + P
Sbjct: 1037 GVYHSTHPSSTNSRLSPETHYLSKYIDFYCLWSHRIPQDVAKFFGVHSTNLAPGFSKWVP 1096
Query: 1559 ELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVA 1738
L + ++LTNSQ SMKTL DCGF++ TIASSQGSTY GA +I LD+NS LLSHS+SLVA
Sbjct: 1097 NLSPSSKILTNSQNSMKTLVDCGFASVTIASSQGSTYPGATNILLDRNSALLSHSNSLVA 1156
Query: 1739 VTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRR 1918
+TRS+ G++FTGD+ +L+ TSNL+FS + + L LF E PKCP + PL SR
Sbjct: 1157 LTRSKKGVVFTGDRKMLEEGPTSNLLFSRYFTGKVVSLAGLFPSELPKCPHLTVPLTSRS 1216
Query: 1919 AGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSV 2098
LSG+G H++ R A+A I + DV +D PFLGDG NAP +
Sbjct: 1217 VKLSGAG--------LYDHAIPFRS--ASAPMIKSSVTSDVILDPVRPFLGDGDLNAPQI 1266
Query: 2099 EPSFVPETRRPLHFDLASAVPSVISLASARCSATPIEPVYPGCNWESIAADFMPAHDPLV 2278
F+PETRRPLHFD+ S PS S ASA + EPVYPG +E++AA F+P HDP
Sbjct: 1267 STHFLPETRRPLHFDIPSGKPSSDSPASAEPTVPVHEPVYPGETFENLAAHFLPCHDPED 1326
Query: 2279 KEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPY 2458
+EI ++ ++SNQFP+++ PF ++ Q SLLAAVH+ ++D TLLPASI KRLRFR S +PY
Sbjct: 1327 REIHFRGQLSNQFPHINRPFELACQSSSLLAAVHSERDDPTLLPASIPKRLRFRPSSAPY 1386
Query: 2459 TISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNA 2638
++ +DEVLG LL+EGLCRAY R+ ++PF+ L+ ECI LNE+AQLSSKTQ+VIM N+
Sbjct: 1387 RLTAKDEVLGSLLYEGLCRAYHRNSFTVLPFNETLYLECIALNEFAQLSSKTQSVIMANS 1446
Query: 2639 ERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDS 2818
+RSDPDWRYSAVRIFSK QHKVNE S+FG+WKACQTLALMHD VVL+LGPVKKYQR+FD+
Sbjct: 1447 KRSDPDWRYSAVRIFSKAQHKVNENSIFGNWKACQTLALMHDAVVLLLGPVKKYQRMFDA 1506
Query: 2819 ADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSI 2998
DRP H+Y+HAGNTP Q+S WC+ HLT +VHLANDYTAF QSQHGEAVVLERKKMERLSI
Sbjct: 1507 QDRPAHLYVHAGNTPAQMSSWCQNHLTDTVHLANDYTAFVQSQHGEAVVLERKKMERLSI 1566
Query: 2999 PTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSG 3178
P LIDLHV LK NV TQFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EY+ P M+SG
Sbjct: 1567 PQALIDLHVFLKTNVETQFGPLTCMRLTGEPGTYDDNSDYNLAVINLEYSASHVPTMISG 1626
Query: 3179 DDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIA 3358
DDSLLDFEP R EW+A++PLLALRFKKER+RYATFCGYY G GAVRSP+ALFAK+ IA
Sbjct: 1627 DDSLLDFEPPRRPEWSALEPLLALRFKKERDRYATFCGYYVGKAGAVRSPIALFAKLMIA 1686
Query: 3359 IDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRL 3538
+DD S+ DK+ SYLAEF++GHSLGD W +LP+E VLFQSA FDFFCR A KI+L+L
Sbjct: 1687 VDDGSLGDKLISYLAEFAVGHSLGDPFWTLLPLEAVLFQSACFDFFCRRAPPALKISLKL 1746
Query: 3539 GEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKS 3718
GEV ESI+ RL G W ++A +S+L SA R +L SSRQ RSLP++PE+S LQG+LL+S
Sbjct: 1747 GEVSESIMARLGRGLNWASSAVYSMLSSAQRRALLTSSRQGRSLPDNPEVSKLQGELLQS 1806
Query: 3719 F----QPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHENLGGGAPPDSRVVAQPPLP 3886
F QPS N++ +G P D RV QP LP
Sbjct: 1807 FQFVPQPSMNNSLLLPLFGGLSPSLAAHPMPGPNVT----SQVGPAPPNDDRVDRQPSLP 1862
Query: 3887 LAPKISETPP-GPYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVE 4063
LAP+++E P ++D PFQW+ + G F + DL+AS T+KTLTA YRHAE+ S E
Sbjct: 1863 LAPRVAEVSPLHAHIDYPFQWEVGTYSGDKAAFVSDDLSASKTLKTLTAGYRHAEILSAE 1922
Query: 4064 AEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLT 4243
+F P A +FSKP+S+ VWTIASI+PA+A E YYGGR LT+GGPVL+ ST +P D++
Sbjct: 1923 VDFVPLAPSFSKPISVGAVWTIASISPASAHEQSYYGGRLLTLGGPVLMSSTTRIPLDVS 1982
Query: 4244 RLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGN 4393
R+NP+IK+SV+++DTPR+S+T YS +GT L V++RGI+RLSGP+GN
Sbjct: 1983 RINPVIKSSVSYSDTPRISYTVYSAAGTANTALISVIIRGIVRLSGPSGN 2032
>YP_224218.1 replicase-associated polyprotein [Citrus sudden death-associated
virus] AAW88343.1 replicase-associated polyprotein
[Citrus sudden death-associated virus]
Length = 2188
Score = 1568 bits (4061), Expect = 0.0
Identities = 804/1355 (59%), Positives = 978/1355 (72%), Gaps = 6/1355 (0%)
Frame = +2
Query: 353 DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLIAI 532
D + + LA D S GP ++ L+P YLPG+G FI +R + +A PYP DCLL++I
Sbjct: 850 DWDPSPLARDSSASGPPGMYSDLFPAPYLPGTGQFIFRSRANGRANIPYPD-MDCLLLSI 908
Query: 533 SEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHSQI 712
+AT + ALW+TL +T PDSL+ I R GLSTDHF +LA YSLRC FH+
Sbjct: 909 EQATRLPKEALWDTLCATCPDSLLDPDTIRRVGLSTDHFAILAHHYSLRCRFHTAHGVIE 968
Query: 713 MGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHLAEDLASSAFNFRCQGNLLPF 892
+GM+DATSSF I H A GHF+L Q+ TP G +A+DLA +A F G LLP
Sbjct: 969 LGMADATSSFDIDHTAGNP---GHFSL-RQSATPRLNGGIAQDLAVAALRFNIDGTLLPI 1024
Query: 893 RTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAESRRIRL 1072
R+VH Y + +RAKNL SNMKNGFDG++ANI P TNE+R+++L+LD +DIA R +RL
Sbjct: 1025 RSVHVYSTWPKRAKNLSSNMKNGFDGIMANIHPTKTNESREKILALDSQLDIAVRRSVRL 1084
Query: 1073 IHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLGTWESS 1252
IHIAGFPGCGKS+PI +LL+TP F N+K++VPTVELR EWK +P + WR+GTWESS
Sbjct: 1085 IHIAGFPGCGKSFPISRLLRTPTFRNFKVAVPTVELRAEWKTITGLPASEAWRIGTWESS 1144
Query: 1253 LLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNSRILSE 1432
LLKSARVLVIDEIYKMPRGY+DLAIH+D IEMVIALGDPLQGEYHS++P+S+NSR+LSE
Sbjct: 1145 LLKSARVLVIDEIYKMPRGYIDLAIHSDPTIEMVIALGDPLQGEYHSTHPSSTNSRLLSE 1204
Query: 1433 IRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQASMKT 1612
+HL ++D YC WS RVPQN+AA F V +++ PGF Y+ ELP N R+L NSQ + T
Sbjct: 1205 PQHLSMYLDFYCLWSHRVPQNVAAFFHVKTTSKQPGFCRYQRELP-NSRILANSQNAGHT 1263
Query: 1613 LNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGDKSLLD 1792
L CG++A TIASSQGSTY+ AA IHLD+NS LLS +HS+VA+TRS+ G++FTGD + L
Sbjct: 1264 LQQCGYAAVTIASSQGSTYENAACIHLDRNSSLLSPAHSMVALTRSKVGVIFTGDPAQLS 1323
Query: 1793 GTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQFTADP 1972
+SN +FS + L F +EFPK ++ PLK+R PR+ A P
Sbjct: 1324 NAPSSNRMFSEFFSGRTRPLHDWFHNEFPKATVLTEPLKTR---------GPRLTGAASP 1374
Query: 1973 HSLFLRPRLANARGITPAFKGDVAIDLRAPF-LGDGSANAPSVEPSFVPETRRPLHFDLA 2149
+S + R A+ + P F+GDV I AP LG G NAP V F+PETRRPLH+D+
Sbjct: 1375 YSKAVPIRQASTPALKPDFQGDVIIS--APIVLGSGELNAPQVSSHFLPETRRPLHWDIP 1432
Query: 2150 SAVP-SVISLASARCSATPIEPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYL 2326
SA+P S S + + EPVYPG +E++AA F+PAHDP +EI W+ ++SNQFP++
Sbjct: 1433 SAIPESATRPDSTEPTTSHPEPVYPGETFENLAAHFLPAHDPTDREIYWQGQLSNQFPHM 1492
Query: 2327 DVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLLFEG 2506
D F ++AQPMSLLAAVH K D TLLPASI KRLRFR SD PY I+P+DE+LGQLLFEG
Sbjct: 1493 DKEFHLAAQPMSLLAAVHQEKQDPTLLPASIQKRLRFRPSDKPYQITPKDEILGQLLFEG 1552
Query: 2507 LCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFS 2686
LCRAY R P FDP+LFAECI+LNE+AQLSSKTQA IMGNA RSDPDWR+SAVRIFS
Sbjct: 1553 LCRAYHRSPFHTEAFDPVLFAECINLNEFAQLSSKTQATIMGNARRSDPDWRWSAVRIFS 1612
Query: 2687 KTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPF 2866
KTQHKVNEGS+F SWKACQTLALMHD VVL+LGPVKKYQRVFD DRP H+YIHAGNTP
Sbjct: 1613 KTQHKVNEGSIFRSWKACQTLALMHDAVVLILGPVKKYQRVFDQRDRPRHLYIHAGNTPS 1672
Query: 2867 QLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVS 3046
Q+S+WC+ HLT +V LANDYTAFDQSQHGEAVVLERKKMERLSIP LIDLH+HLK +VS
Sbjct: 1673 QMSNWCQQHLTTAVKLANDYTAFDQSQHGEAVVLERKKMERLSIPQALIDLHIHLKTHVS 1732
Query: 3047 TQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWT 3226
TQFGPLTCMRLTGEPGTYDDNSDYNLAV++ EY P MVSGDDSLLD EP TR EW
Sbjct: 1733 TQFGPLTCMRLTGEPGTYDDNSDYNLAVVNCEYMAANTPTMVSGDDSLLDREPPTRPEWV 1792
Query: 3227 AVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAE 3406
++PLL+LRFKKER RYATFCGYY G VRSP+ALFAK+ IA+DD SISDK+ASYL+E
Sbjct: 1793 ILQPLLSLRFKKERGRYATFCGYYASHVGCVRSPVALFAKLAIAVDDGSISDKMASYLSE 1852
Query: 3407 FSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAK 3586
F++GHSLGD W+ LP+E V FQSA FDFFCR A R K++L LGEV ESI+ R+ S K
Sbjct: 1853 FALGHSLGDHLWEALPLEAVPFQSACFDFFCRRAPRHLKLSLMLGEVPESIIARIGSSLK 1912
Query: 3587 WIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ-PSEXXXXXXXXXX 3763
W ++A ++ L SA R IL SSR SRS+P+DP+ +LLQG+LL+ FQ P
Sbjct: 1913 WASHAIYTTLSSAARVAILRSSRNSRSMPDDPDTTLLQGELLQHFQVPFMQSDTLLPLTG 1972
Query: 3764 XXXXXXXXXXXXXXNL--SMAHHENLGGGAPPDSRVVAQPPLPLAPKISETP-PGPYVDV 3934
+L SMA G D RV QP LP AP+++E P VD
Sbjct: 1973 GSSAPILTPEAFSTSLAFSMASDAQAGPAPSRDDRVDRQPRLPAAPRVAEVGLNAPSVDY 2032
Query: 3935 PFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSIS 4114
PFQW S DG + DL+ S T+ + A YRHAEL SVE E CP AAAFSKP+S+S
Sbjct: 2033 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2092
Query: 4115 VVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPR 4294
VWTIASI+PA+A ET YYGGR TVGGPVL+ ST +PADLTRLNP++K V + D PR
Sbjct: 2093 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADLTRLNPVLKGPVKYTDCPR 2152
Query: 4295 LSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
S++ YSN GT G L +++RG++RLSGP+GN L
Sbjct: 2153 FSYSVYSNGGTKGTNLCTIILRGVVRLSGPSGNLL 2187
>ABA54133.1 polyprotein [Citrus sudden death-associated virus]
Length = 2189
Score = 1563 bits (4046), Expect = 0.0
Identities = 797/1354 (58%), Positives = 971/1354 (71%), Gaps = 5/1354 (0%)
Frame = +2
Query: 353 DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLIAI 532
D + + +A D S GP ++ L+P YLPG+G FI +R + +A PYP DCLL++I
Sbjct: 850 DWDPSPVARDSSATGPPGMYSDLFPAPYLPGTGQFIFRSRANGRANIPYPD-MDCLLLSI 908
Query: 533 SEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHSQI 712
+AT + ALW+TL +T PDSL+ I R GLSTDHF + A YSLRC FH+
Sbjct: 909 EQATRLPKEALWDTLCATCPDSLLDPDTIRRVGLSTDHFVIFAHHYSLRCRFHTAHGVIE 968
Query: 713 MGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHLAEDLASSAFNFRCQGNLLPF 892
+GM+DATSSF I H A GHF+L Q+ TP G +A+DLA +A F G LLP
Sbjct: 969 LGMADATSSFDIDHTAGNP---GHFSL-RQSATPRLNGGIAQDLAVAALRFNIDGTLLPI 1024
Query: 893 RTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAESRRIRL 1072
R+VH Y + +RAKNL SNMKNGFDG++ANI P TNE+R+++L+LD +DIA R +RL
Sbjct: 1025 RSVHVYSTWPKRAKNLSSNMKNGFDGIMANIHPTKTNESREKILALDSQLDIAVRRSVRL 1084
Query: 1073 IHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLGTWESS 1252
IHIAGFPGCGKS+PI +LL+TP F N+K++VPTVELR EWK + +P + WR+GTWESS
Sbjct: 1085 IHIAGFPGCGKSFPISRLLRTPTFRNFKVAVPTVELRAEWKAIIGLPTSEAWRIGTWESS 1144
Query: 1253 LLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNSRILSE 1432
LLKSARVLVIDEIYKMPRGY+DLAIH+D IEMVIALGDPLQGEYHS++P+S+NSR+L+E
Sbjct: 1145 LLKSARVLVIDEIYKMPRGYIDLAIHSDPTIEMVIALGDPLQGEYHSTHPSSTNSRLLAE 1204
Query: 1433 IRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQASMKT 1612
HL ++D YC WS RVPQN+AA F + +++ PGF Y+ ELP N R+L NSQ + T
Sbjct: 1205 PHHLSMYLDYYCMWSHRVPQNVAAFFHIKTTSKQPGFCRYQRELP-NSRILANSQNAGHT 1263
Query: 1613 LNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGDKSLLD 1792
L CG++A TIASSQGSTYD AA IHLD+NS LLS +HS+VA+TRS+ G++FTGD + L
Sbjct: 1264 LQQCGYAAVTIASSQGSTYDNAACIHLDRNSSLLSPAHSMVALTRSKVGVIFTGDPAQLS 1323
Query: 1793 GTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQFTADP 1972
+SN +FS + L F +EFPK ++ PLK+R PR+ A P
Sbjct: 1324 NAPSSNRMFSEFFSGRTRPLHDWFHNEFPKATVLTEPLKTR---------GPRLTGAASP 1374
Query: 1973 HSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLAS 2152
+S + + P F+GDV LG G NAP V F+PETRRPLH+D+ S
Sbjct: 1375 YSKVFPSGKDSTPALKPDFQGDVRSSRAPIVLGSGELNAPQVSTHFLPETRRPLHWDIPS 1434
Query: 2153 AVP-SVISLASARCSATPIEPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLD 2329
A+P S S + EPVYPG +E++AA F+PAHDP +EI W+ ++SNQFP++D
Sbjct: 1435 AIPESATRPDSTEPTTCHPEPVYPGETFENLAAHFLPAHDPTDREIYWQGQLSNQFPHMD 1494
Query: 2330 VPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGL 2509
F ++AQPMSLLAA+H K D TLLPASI KRLRFR SD PY I+P+DE+LGQLLFEGL
Sbjct: 1495 KEFHLAAQPMSLLAAIHQEKQDPTLLPASIQKRLRFRPSDRPYQITPKDEILGQLLFEGL 1554
Query: 2510 CRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSK 2689
CRAY R P FDP+LFAECI+LNE+AQLSSKTQA IMGNA RSDPDWR+SAVRIFSK
Sbjct: 1555 CRAYHRSPFHTEAFDPVLFAECINLNEFAQLSSKTQATIMGNARRSDPDWRWSAVRIFSK 1614
Query: 2690 TQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQ 2869
TQHKVNEGS+FGSWKACQTLALMHD VVL+LGPVKKYQRVFD DRP H+YIHAGNTP Q
Sbjct: 1615 TQHKVNEGSIFGSWKACQTLALMHDAVVLILGPVKKYQRVFDQRDRPRHLYIHAGNTPSQ 1674
Query: 2870 LSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVST 3049
+S+WC+ HLT +V LANDYTAFDQSQHGEAVVLERKKMERLSIP LIDLH+HLK +VST
Sbjct: 1675 MSNWCQQHLTTAVKLANDYTAFDQSQHGEAVVLERKKMERLSIPQALIDLHIHLKTHVST 1734
Query: 3050 QFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTA 3229
QFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EY P MVSGDDSLLD EP TR EW
Sbjct: 1735 QFGPLTCMRLTGEPGTYDDNSDYNLAVINCEYMAANTPTMVSGDDSLLDREPPTRPEWVI 1794
Query: 3230 VKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEF 3409
++PLL+LRFKKER RYATFCGYY G VRSP+ALFAK+ IA+DD SISDK+ASYL+EF
Sbjct: 1795 LQPLLSLRFKKERGRYATFCGYYASHVGCVRSPVALFAKLAIAVDDGSISDKMASYLSEF 1854
Query: 3410 SIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKW 3589
++GHSLGD W+ LP+E V FQSA FDFFCR A R K++L LGEV ESI+ R+ S KW
Sbjct: 1855 ALGHSLGDHLWEALPLEAVPFQSACFDFFCRRAPRHLKLSLMLGEVPESIIARIGSSLKW 1914
Query: 3590 IANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ-PSEXXXXXXXXXXX 3766
++A ++ L SA R IL SSR SRS+P+DP+ +LLQG+LL+ FQ P
Sbjct: 1915 ASHAIYTTLSSAARVAILRSSRNSRSMPDDPDTTLLQGELLQHFQVPFMQSDTLLPLTGG 1974
Query: 3767 XXXXXXXXXXXXXNL--SMAHHENLGGGAPPDSRVVAQPPLPLAPKISETP-PGPYVDVP 3937
+L SMA G D RV QP LP AP+++E P VD P
Sbjct: 1975 SSAPILTPEAFSTSLAFSMASDAQAGPAPSRDDRVDRQPRLPAAPRVAEVGLNAPSVDYP 2034
Query: 3938 FQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISV 4117
FQW S DG + DL+ S T+ + A YRHAEL SVE E CP AAAFSKP+S+S
Sbjct: 2035 FQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVSA 2094
Query: 4118 VWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRL 4297
VWTIASI+PA+A ET YYGGR TVGGPVL+ ST +PADLTRLNP++K V + D PR
Sbjct: 2095 VWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADLTRLNPVLKGPVKYTDCPRF 2154
Query: 4298 SFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
S++ YSN GT G L +++RG++RLSGP+GN L
Sbjct: 2155 SYSVYSNGGTKGTNLCTIILRGVVRLSGPSGNLL 2188
>NP_044447.1 replicase-associated polyprotein [Oat blue dwarf virus] AAC57874.1
replicase-associated polyprotein [Oat blue dwarf virus]
Length = 2066
Score = 1560 bits (4040), Expect = 0.0
Identities = 807/1401 (57%), Positives = 996/1401 (71%), Gaps = 36/1401 (2%)
Frame = +2
Query: 299 VDPSTGIVSTAS--PAQAPLDP-EMASLASDPSTQGPISTFASLYPGSYLPGSGDFICAN 469
V+PS G+VS +S P D + + LA DPS GP+ + L+P +Y SG F
Sbjct: 666 VEPS-GVVSASSWGATNQPADQVDDSPLARDPSASGPVRFYRDLFPANYAGDSGTFDFRA 724
Query: 470 RNSSKAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHF 649
R S ++PTPYP DCLL+A +AT I+ ALW+ L +T PDS + I++ GLSTDHF
Sbjct: 725 RASGRSPTPYP-AMDCLLVATEQATRISREALWDCLTATCPDSFLDPKSIAQHGLSTDHF 783
Query: 650 TVLARFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTL-LHQAPTPTSGG 826
+LA +SL FHS H +GM+DATS F I H A ++ GHF+L L P +GG
Sbjct: 784 VILAHRFSLCANFHSAEHVIQLGMADATSIFMINHTAGSAGLPGHFSLRLGDQPRALNGG 843
Query: 827 HLAEDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNE 1006
LA+DLA +A F G+LLP R+VHTY S +RAKNL+SNMKNGFDGV+A+I+P ++
Sbjct: 844 -LAQDLAVAALRFNISGDLLPTRSVHTYRSWPKRAKNLVSNMKNGFDGVMASINPIRPSD 902
Query: 1007 ARDRLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRN 1186
AR+++++LDG++DIA R +RLIHIAGFPGCGK++PI +LL T AF ++KL+VPT ELR+
Sbjct: 903 AREKIVALDGLLDIARPRSVRLIHIAGFPGCGKTHPITKLLHTAAFRDFKLAVPTTELRS 962
Query: 1187 EWKDSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALG 1366
EWK+ M++ P+ WR GTWESSLLKSAR+LVIDEIYK+PRGYLDLAIH+DS+IE VIALG
Sbjct: 963 EWKELMKLSPSQAWRFGTWESSLLKSARILVIDEIYKLPRGYLDLAIHSDSSIEFVIALG 1022
Query: 1367 DPLQGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFA 1546
DPLQGEYHS++P+SSNSR++ E+ HL P++D YC WS+RVPQ++AA FQV S NPA GFA
Sbjct: 1023 DPLQGEYHSTHPSSSNSRLIPEVSHLAPYLDYYCLWSYRVPQDVAAFFQVQSHNPALGFA 1082
Query: 1547 SYRPELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSH 1726
+ P R+LTNSQ SM T+ CG+SA TIASSQGSTY GA IHLD+NS LLS S+
Sbjct: 1083 RLSKQFPTTGRVLTNSQNSMLTMTQCGYSAVTIASSQGSTYSGATHIHLDRNSSLLSPSN 1142
Query: 1727 SLVAVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPL 1906
SLVA+TRSR+G+ F+GD +LL+G SNL+FSA + + ++A F FP L+F+PL
Sbjct: 1143 SLVALTRSRTGVFFSGDPALLNGGPNSNLMFSAFFQGKSRHIRAWFPTLFPTATLLFSPL 1202
Query: 1907 KSRRAGLSGS-----------GDAPRVQF--TADPHSLFLRPRLANARGITPAFKGDVAI 2047
+ R L+G+ D P + + P+S R A + P+ + DV +
Sbjct: 1203 RQRHNRLTGALAPAQPSHLLLPDLPSLPPLPASGPYSRSFPVRSRFAAAVKPSDRSDV-L 1261
Query: 2048 DLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLASAVPSVISLASARC-SATPIEPVYPG 2224
+GDG NAP ++ SF+PETRRPLHFDL S P S S T EPVYPG
Sbjct: 1262 SWAPIAVGDGETNAPRIDTSFLPETRRPLHFDLPSFRPQAPPPPSDPAPSGTAFEPVYPG 1321
Query: 2225 CNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTL 2404
+E++ A F+PAHDP +EI W+ ++SNQFP++D + ++AQPM+LLA +H+SK+D TL
Sbjct: 1322 ETFENLVAHFLPAHDPTDREIHWRRQLSNQFPHVDKEYHLAAQPMTLLAPIHDSKHDPTL 1381
Query: 2405 LPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHL 2584
L ASI KRLRFR S SPY ISPRDE+LGQLL+E LCRAY R P PFD LF ECI L
Sbjct: 1382 LAASIQKRLRFRPSASPYRISPRDELLGQLLYESLCRAYHRSPTTTHPFDEALFVECIDL 1441
Query: 2585 NEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHD 2764
NE+AQL+SKTQAVIMGNA RSDPDWR+SAVRIFSKTQHKVNEGS+FG+WKACQTLALMHD
Sbjct: 1442 NEFAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSKTQHKVNEGSIFGAWKACQTLALMHD 1501
Query: 2765 YVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQS 2944
VVL+LGPVKKYQRVFD+ DRP H+YIHAG TP +S WC+ HLTP+V LANDYTAFDQS
Sbjct: 1502 AVVLLLGPVKKYQRVFDARDRPAHLYIHAGQTPSSMSLWCQTHLTPAVKLANDYTAFDQS 1561
Query: 2945 QHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNL 3124
QHGEAVVLERKKMERLSIP HLI LHVHLK +V TQFGPLTCMRLTGEPGTYDDN+DYNL
Sbjct: 1562 QHGEAVVLERKKMERLSIPDHLISLHVHLKTHVETQFGPLTCMRLTGEPGTYDDNTDYNL 1621
Query: 3125 AVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTG 3304
AVI+ EYA P MVSGDDSLLDFEP R EW A++PLLALRFKKER YATFCGYY
Sbjct: 1622 AVINLEYAAAHVPTMVSGDDSLLDFEPPRRPEWVAIEPLLALRFKKERGLYATFCGYYAS 1681
Query: 3305 FTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAI 3484
G VRSP+ALFAK+ IA+DD+SISDK+A+YL EF++GHSLGD W LP+ V FQSA
Sbjct: 1682 RVGCVRSPIALFAKLAIAVDDSSISDKLAAYLMEFAVGHSLGDSLWSALPLSAVPFQSAC 1741
Query: 3485 FDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSR 3664
FDFFCR A R+ K+AL LGEV E+I+ RL S W+++A +SLLPS R ILHSSRQ R
Sbjct: 1742 FDFFCRRAPRDLKLALHLGEVPETIIQRL-SHLSWLSHAVYSLLPSRLRLAILHSSRQHR 1800
Query: 3665 SLPEDPEISLLQGQLLKSFQ-----------------PSEXXXXXXXXXXXXXXXXXXXX 3793
SLPEDP +S LQG+LL++F +
Sbjct: 1801 SLPEDPAVSSLQGELLQTFHAPMPSLPSLPLFGGLSPDNILTPHEFRTALYESSAYPTPP 1860
Query: 3794 XXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKISETPPG-PYVDVPFQWQSMSLDGK 3970
++S H +G D R QP LPLAP+I E+ P+VDVPFQW S G
Sbjct: 1861 NSPTSMSGIHASQVGPPPASDDRTDRQPSLPLAPRIVESSLAVPHVDVPFQWAVASYAGD 1920
Query: 3971 TNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPAT 4150
+ F T DL+ S+ + LT YRHAEL S E EF P AAAF+KP+S++ VWTIASI PAT
Sbjct: 1921 SAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISVTAVWTIASIAPAT 1980
Query: 4151 AEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTT 4330
E YYGGR LT+GGPVL+GS +PADLTRLNP+IKT+V F D PR +++ Y+N G+
Sbjct: 1981 TTELQYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFTDCPRFTYSVYANGGSA 2040
Query: 4331 GVPLAYVLVRGIIRLSGPAGN 4393
PL V+VRG+IRLSGP+GN
Sbjct: 2041 NTPLITVMVRGVIRLSGPSGN 2061
>ADD13602.1 replicase-associated polyprotein [Oat blue dwarf virus]
Length = 2067
Score = 1557 bits (4031), Expect = 0.0
Identities = 806/1401 (57%), Positives = 996/1401 (71%), Gaps = 36/1401 (2%)
Frame = +2
Query: 299 VDPSTGIVSTAS--PAQAPLDP-EMASLASDPSTQGPISTFASLYPGSYLPGSGDFICAN 469
V+PS G+VS +S P D + + LA DPS GP+ + L+P +Y SG F
Sbjct: 666 VEPS-GVVSASSWGATNQPADQVDDSPLARDPSASGPVRFYRDLFPANYAGDSGTFDFRA 724
Query: 470 RNSSKAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHF 649
R S ++PTPYP DCLL+A +AT I+ ALW+ L +T PDS + I++ GLSTDHF
Sbjct: 725 RASGRSPTPYP-AMDCLLVATEQATRISREALWDCLTATCPDSFLDPKSIAQHGLSTDHF 783
Query: 650 TVLARFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTL-LHQAPTPTSGG 826
+LA +SL FHS H +GM+DATS+F I H A ++ GHF+L L P +GG
Sbjct: 784 VILAHRFSLCANFHSAAHVIQLGMADATSTFMINHTAGSAGLPGHFSLRLGDQPRALNGG 843
Query: 827 HLAEDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNE 1006
LA+DLA +A F G+LLP R+VHTY S +RAKNL+SNMKNGFDGV+A+I+P ++
Sbjct: 844 -LAQDLAVAALRFNISGDLLPTRSVHTYRSWPKRAKNLVSNMKNGFDGVMASINPIRPSD 902
Query: 1007 ARDRLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRN 1186
AR+++++LDG++DIA+ R +RLIHIAGFPGCGK++PI +LL T AF ++KL+VPT ELR+
Sbjct: 903 AREKIVALDGLLDIAQPRSVRLIHIAGFPGCGKTHPITKLLHTAAFRDFKLAVPTTELRS 962
Query: 1187 EWKDSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALG 1366
EWK+ M++ P+ WR GTWESSLLKSAR+LVIDEIYK+PRGYLDLAIH+DS+IE VIALG
Sbjct: 963 EWKELMKLSPSQAWRFGTWESSLLKSARILVIDEIYKLPRGYLDLAIHSDSSIEFVIALG 1022
Query: 1367 DPLQGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFA 1546
DPLQGEYHS++P+SSNSR++ E+ HL P++D YC WS+RVPQ++A FQV S NPA GFA
Sbjct: 1023 DPLQGEYHSTHPSSSNSRLIPEVSHLAPYLDYYCLWSYRVPQDVATFFQVQSHNPALGFA 1082
Query: 1547 SYRPELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSH 1726
+ P R+LTNSQ SM T+ CG+SA TIASSQGSTY GA IHLD+NS LLS S+
Sbjct: 1083 RLSKQFPTTGRVLTNSQNSMLTMTQCGYSAVTIASSQGSTYSGATHIHLDRNSSLLSPSN 1142
Query: 1727 SLVAVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPL 1906
SLVA+TRSR+G+ F+GD +LL+G SNL+FSA + + ++ F FP L+ +PL
Sbjct: 1143 SLVALTRSRTGVFFSGDPALLNGGPNSNLMFSAFFQGKSRHIRDWFPTLFPTATLLLSPL 1202
Query: 1907 KSRRAGLSGS-----------GDAPRVQF--TADPHSLFLRPRLANARGITPAFKGDVAI 2047
+ R L+G+ D P + + P+S R A + P + DV +
Sbjct: 1203 RQRHNRLTGALAPVEPSHLLLPDLPSLLPLPASGPYSRAFPVRSRFAAAVKPFDRSDV-L 1261
Query: 2048 DLRAPFLGDGSANAPSVEPSFVPETRRPLHFDLASAVPSVISLASARC-SATPIEPVYPG 2224
+GDG NAP ++ SF+PETRRPLHFDL S P S S T EPVYPG
Sbjct: 1262 SWAPIAVGDGETNAPRIDTSFLPETRRPLHFDLPSFRPQAPPPPSDPAPSGTAFEPVYPG 1321
Query: 2225 CNWESIAADFMPAHDPLVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTL 2404
+E++ A F+PAHDP +EI W+ ++SNQFP++D + ++AQPM+LLA +H+SK+D TL
Sbjct: 1322 ETFENLVAHFLPAHDPTDREIHWRGQLSNQFPHIDKEYHLAAQPMTLLAPIHDSKHDPTL 1381
Query: 2405 LPASISKRLRFRHSDSPYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHL 2584
L ASI KRLRFR S SPY I+PRDE+LGQLL+E LCRAY R P + PFD LF ECI L
Sbjct: 1382 LAASIQKRLRFRPSASPYRITPRDELLGQLLYESLCRAYHRSPTSTHPFDEALFVECIDL 1441
Query: 2585 NEYAQLSSKTQAVIMGNAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHD 2764
NE+AQL+SKTQAVIMGNA RSDPDWR+SAVRIFSKTQHKVNEGS+FG+WKACQTLALMHD
Sbjct: 1442 NEFAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSKTQHKVNEGSIFGAWKACQTLALMHD 1501
Query: 2765 YVVLVLGPVKKYQRVFDSADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQS 2944
VVL+LGPVKKYQRVFD+ DRP H+YIHAG TP +S WC+ HLTP+V LANDYTAFDQS
Sbjct: 1502 AVVLLLGPVKKYQRVFDARDRPAHLYIHAGQTPSSMSLWCQTHLTPAVKLANDYTAFDQS 1561
Query: 2945 QHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNL 3124
QHGEAVVLERKKMERLSIP HLI LHV+LK +V TQFGPLTCMRLTGEPGTYDDN+DYNL
Sbjct: 1562 QHGEAVVLERKKMERLSIPDHLISLHVYLKTHVETQFGPLTCMRLTGEPGTYDDNTDYNL 1621
Query: 3125 AVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTG 3304
AVI+ EYA P MVSGDDSLLDFEP R EW A++PLLALRFKKER YATFCGYY
Sbjct: 1622 AVINLEYAAAHVPTMVSGDDSLLDFEPPRRPEWVAIEPLLALRFKKERGLYATFCGYYAS 1681
Query: 3305 FTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAI 3484
G VRSP+ALFAK+ IA+DD+SISDK+A+YL EF++GHSLGD W LP+ V FQSA
Sbjct: 1682 RVGCVRSPIALFAKLAIAVDDSSISDKLAAYLMEFAVGHSLGDSLWSALPLSAVPFQSAC 1741
Query: 3485 FDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSR 3664
FDFFCR A R+ K+AL LGEV E+I+ RL S W+++A +SLLPS R ILHSSRQ R
Sbjct: 1742 FDFFCRRAPRDLKLALHLGEVPETIIQRL-SHLSWLSHAVYSLLPSRLRLAILHSSRQHR 1800
Query: 3665 SLPEDPEISLLQGQLLKSF---QPSE--------------XXXXXXXXXXXXXXXXXXXX 3793
SLPEDP +S LQG+LL +F PS
Sbjct: 1801 SLPEDPAVSSLQGELLHTFHAPMPSPPSLPLFGGLSPDNILTPHEFRTALYESSAYPTPP 1860
Query: 3794 XXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKISETPPG-PYVDVPFQWQSMSLDGK 3970
++S H +G D R QP LPLAP++ E+ PYVDVPFQW S G
Sbjct: 1861 NSPTSMSGIHASQVGPPPASDDRTDRQPSLPLAPRLVESSLAVPYVDVPFQWAVASYAGD 1920
Query: 3971 TNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPAT 4150
+ F T DL+ S+ + LT YRHAEL S E EF P AAAFSKP+S++ VWTIASI PAT
Sbjct: 1921 SAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFSKPISVTAVWTIASIAPAT 1980
Query: 4151 AEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTT 4330
E YYGGR LT+GGPVL+GS +PADLTRLNP+IKT+V F D PR +++ Y+NSG+
Sbjct: 1981 TTELQYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFTDCPRFTYSVYANSGSA 2040
Query: 4331 GVPLAYVLVRGIIRLSGPAGN 4393
PL V+VRG+IRLSGP+GN
Sbjct: 2041 NTPLITVMVRGVIRLSGPSGN 2061
>YP_009315883.1 ORF1 polyprotein [Grapevine asteroid mosaic-associated virus]
AOX24075.1 ORF1 polyprotein [Grapevine asteroid
mosaic-associated virus]
Length = 2158
Score = 1545 bits (3999), Expect = 0.0
Identities = 789/1378 (57%), Positives = 979/1378 (71%), Gaps = 11/1378 (0%)
Frame = +2
Query: 299 VDPSTGIVSTA-SPAQAPL-DPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANR 472
++PS + +T A AP D + + L D S GPI+ ++ L+P +YLP +GDF+ +R
Sbjct: 792 LEPSGAVHATTWDQASAPSSDWDASGLGRDGSANGPIALYSELHPANYLPSTGDFLFRDR 851
Query: 473 NSSKAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFT 652
+ +A PYP DCLL+A+ +AT I ALW+TL +T PDS++ +I R+GLSTDHF
Sbjct: 852 ANGRANLPYPT-MDCLLVAVEQATRIPKEALWDTLCATCPDSMLRPEDIRREGLSTDHFA 910
Query: 653 VLARFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPTSGGHL 832
VLA YSL FHS +GM+DA++ FAI H A + GHF L +P G L
Sbjct: 911 VLAHHYSLAADFHSASGIIPIGMADASAKFAITHTAGSGSAPGHFAL-RLPDSPKLNGGL 969
Query: 833 AEDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEAR 1012
A+DLA +A F G LLPFRT H Y + RRAKNL SNMKNGFDGV+A I+PA ++AR
Sbjct: 970 AQDLAVAALRFNLSGALLPFRTAHPYTTWPRRAKNLSSNMKNGFDGVMATINPAKPSDAR 1029
Query: 1013 DRLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEW 1192
+++++LD +DIA R +RLIHIAGFPGCGKSYPI +LL TPAF N+K++VPTVELR EW
Sbjct: 1030 EKIIALDSSLDIAAPRSVRLIHIAGFPGCGKSYPIARLLATPAFRNFKVAVPTVELRAEW 1089
Query: 1193 KDSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDP 1372
KD +++P + WR+GTWESSLLK ARVLVIDEIYKMPRGYLDLAIHAD IEMVIALGDP
Sbjct: 1090 KDLLKLPGNAAWRIGTWESSLLKMARVLVIDEIYKMPRGYLDLAIHADPTIEMVIALGDP 1149
Query: 1373 LQGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASY 1552
LQGEYHS++ +S+N+R+L E RHL P++D YC WS R+P+N+AA FQVP+S+ GF +
Sbjct: 1150 LQGEYHSTHASSTNARLLPEPRHLAPYLDYYCLWSHRIPRNVAAFFQVPTSSTEEGFVRH 1209
Query: 1553 RPELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSL 1732
ELP + R+LTNSQ + TL CG++A TIASSQGSTY GAA IHLD+NS LLSH+HSL
Sbjct: 1210 VRELPGDSRILTNSQNAGHTLQQCGYAAVTIASSQGSTYPGAACIHLDRNSSLLSHAHSL 1269
Query: 1733 VAVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKS 1912
VA+TRSR G+LFTGD +L G +TSN +F+ + L F EFP ++ P+
Sbjct: 1270 VALTRSRKGVLFTGDLGILTGHTTSNRMFAEFYSGKSRPLHDWFHAEFPTATIIHEPITK 1329
Query: 1913 RRAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAP 2092
R + L G+ +A ++ + R + P+ DV +GDGS N P
Sbjct: 1330 RHSNLKGATNA---------YARAIPIRQPAQPALKPSSMADVVSSAEI-VVGDGSVNQP 1379
Query: 2093 SVEPSFVPETRRPLHFDLASAVPSVISLA-SARCSATPIEPVYPGCNWESIAADFMPAHD 2269
V F+PETRRPLHFD+ SA L S S T E VYPG +E++AA F+PAHD
Sbjct: 1380 QVSTHFLPETRRPLHFDMPSARAEPADLPQSTEPSTTAFEAVYPGETFENLAAHFLPAHD 1439
Query: 2270 PLVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSD 2449
P +EI W ++SNQFP+++ + ++AQP+SLLAA+H+ K+D TLLPASI KRLRFR +
Sbjct: 1440 PSDREIHWAGQLSNQFPHINKEYHLAAQPLSLLAAIHSEKDDPTLLPASIQKRLRFRPTP 1499
Query: 2450 SPYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIM 2629
+PY ISPRDE+LGQLLFEGLCR Y R P + PFDP+L+AECI LNE+AQL+SKTQAVIM
Sbjct: 1500 APYFISPRDEILGQLLFEGLCRGYHRSPLSSEPFDPVLYAECICLNEFAQLTSKTQAVIM 1559
Query: 2630 GNAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRV 2809
GNA RSDPDWR+SAVRIFSK QHKVNEGS+FG WKACQTLALMHD VVL+LGPVKKYQRV
Sbjct: 1560 GNARRSDPDWRWSAVRIFSKAQHKVNEGSIFGPWKACQTLALMHDAVVLLLGPVKKYQRV 1619
Query: 2810 FDSADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMER 2989
FD+ DRP +Y+HAG+TP Q+S WC+ +LT V LANDYTAFDQSQHGEAVVLERKKMER
Sbjct: 1620 FDTRDRPSTLYLHAGHTPSQMSAWCQRNLTSKVKLANDYTAFDQSQHGEAVVLERKKMER 1679
Query: 2990 LSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVM 3169
L+IP LIDLHV+LK +VSTQFGPLTCMRLTGEPGTYDDNSDYNLAVI+ EY + PVM
Sbjct: 1680 LNIPQQLIDLHVYLKTHVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVINCEYFASSTPVM 1739
Query: 3170 VSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKI 3349
VSGDDSLLD EP R EW ++P+LALRFKKER+RYATFCGYY G VRSP+ALFAKI
Sbjct: 1740 VSGDDSLLDCEPPRRPEWVVIQPMLALRFKKERSRYATFCGYYASSVGCVRSPIALFAKI 1799
Query: 3350 CIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIA 3529
IA+DD SISDK+ASYLAEF++GHSLGD WQ LP+ V FQSA FDFFCR+A E K++
Sbjct: 1800 AIAVDDGSISDKLASYLAEFALGHSLGDSLWQALPLSAVPFQSACFDFFCRHAPPELKLS 1859
Query: 3530 LRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQL 3709
L+LGEV E I+ R+ + +W +A ++ L SA R ILHS R +RS PEDP++S QG+L
Sbjct: 1860 LKLGEVPEDIIARVGANLRWATHAIYTTLSSAARWAILHSRRSTRSQPEDPDVSRYQGEL 1919
Query: 3710 LKSFQ--PSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAH---HENLGGGAPP--DSRVV 3868
L Q PS +L++A N+ G PP D R
Sbjct: 1920 LHHLQSVPSSRMNPDTLLPLKGGSSAPQLTPEAFSLALAQSMASPNVQAGPPPPSDDRTD 1979
Query: 3869 AQPPLPLAPKISETPPG-PYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHA 4045
QPPLP AP++ E P++D PFQW S DG T L+ S T+ T+TA YRHA
Sbjct: 1980 RQPPLPRAPRLVEDASAIPFIDYPFQWVVASYDGSAAKNLTDVLSGSKTLSTITANYRHA 2039
Query: 4046 ELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAI 4225
EL SVE EF P A +FSKP+++S VWT+ SITPAT ET YYGGR +T+GGPVL+ ST
Sbjct: 2040 ELLSVELEFAPLAGSFSKPITLSAVWTVGSITPATTTETSYYGGRVITIGGPVLMNSTTA 2099
Query: 4226 VPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSGPAGNKL 4399
VPADL RLNPIIK +++ D PR S++ Y+N GT G L VL+RG++RL P+GN L
Sbjct: 2100 VPADLRRLNPIIKDQISYTDCPRFSYSVYANGGTAGTNLVTVLIRGVVRLRSPSGNLL 2157
>AIY22517.1 replicase polyprotein [Maize rayado fino virus]
Length = 2028
Score = 1514 bits (3921), Expect = 0.0
Identities = 777/1389 (55%), Positives = 964/1389 (69%), Gaps = 26/1389 (1%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
+ + G V +P +P+ A L +DPS GP+ F L G+Y+ +G F+ RNS
Sbjct: 652 ESTQGTVFAVTPGPRAPEPDTARLDADPSASGPVMEFRELQKGAYIEPTGAFLTRARNSV 711
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ PYP CLL+A+S+ATG+ T LW L + LPDS++ + ++ GL+TDHF VLA
Sbjct: 712 SSSIPYPARAACLLVAVSQATGLPTRTLWAALCANLPDSVLDDGSLATLGLTTDHFAVLA 771
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL---HQAPTPTSGGHL 832
R +SLRC F S +G+ DATS F IRH T GHF L+ P +
Sbjct: 772 RIFSLRCRFVSEHGDVELGLHDATSRFTIRH------TPGHFELVADNFSLPALVGASSV 825
Query: 833 -AEDLASSAFNFRCQGN-LLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNE 1006
DLA + F +LPFR VH + ++VRRAKNLISNMKNGFDGV+A +P
Sbjct: 826 PGSDLAEACKRFVAPDRTVLPFRDVHIHRTDVRRAKNLISNMKNGFDGVMAQANPLDPKS 885
Query: 1007 ARDRLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRN 1186
AR+R L LD +DIA RR+RLIHIAGF GCGKS+PI LL+TPAF +KL+VPT ELR+
Sbjct: 886 ARERFLMLDSCLDIAAPRRVRLIHIAGFAGCGKSWPISHLLRTPAFRVFKLAVPTTELRD 945
Query: 1187 EWKDSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALG 1366
EWK M +WR GTWESSLLK+ARVLVIDE+YKMPRGYLDLAIHAD+AI+ VI LG
Sbjct: 946 EWKALMDPRDQDKWRFGTWESSLLKTARVLVIDEVYKMPRGYLDLAIHADAAIQFVILLG 1005
Query: 1367 DPLQGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFA 1546
DP+QGEYHS++P+SSN+R+ E R+L+P++D YC+WS R+P+N+A VP+++ GFA
Sbjct: 1006 DPIQGEYHSTHPSSSNARLSPEHRYLRPYVDFYCFWSRRIPRNVARALDVPTTSTEMGFA 1065
Query: 1547 SYRPELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSH 1726
Y + P + ++L +++ S K+L DCG+ A TIASSQGST G A +HLD +SR LSH H
Sbjct: 1066 RYSQQFPFSGKILISARDSAKSLADCGYHAVTIASSQGSTIAGPAYVHLDNHSRRLSHQH 1125
Query: 1727 SLVAVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPL 1906
SLVA+TRS+SGI+FTGDK+ DGTS++NL+FSA++ +R+ +++LF P CP V P
Sbjct: 1126 SLVAITRSKSGIVFTGDKAAADGTSSANLLFSAVLLDRRLSVRSLFSALLPCCPFVTEPP 1185
Query: 1907 KSRRAGLSGSGDAPRVQFTADPHSLFLRP-RLANARGITPAFKGDVAIDLRAPFLGDGSA 2083
SR L G+G RP R +A + P F GDV +D AP LGDGSA
Sbjct: 1186 TSRAVLLRGAGYG------------VARPLRARDAPPLGPDFVGDVILDSSAPILGDGSA 1233
Query: 2084 NAPSVEPSFVPETRRPLHFDLASAVPSVISLASARC-SATPIEPVYPGCNWESIAADFMP 2260
NAP V F+PETRRPLHFD+ SA V A SA IEPVYPG ++ES+A+ F+P
Sbjct: 1234 NAPQVSTHFLPETRRPLHFDIPSARHQVADHPLAPDHSACAIEPVYPGESFESLASLFLP 1293
Query: 2261 AHDPLVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFR 2440
D KE ++ +SNQFP+LD PF + AQ SLLA +HNSK+D TLLPASI KRLRFR
Sbjct: 1294 PTDAESKETYFRGEMSNQFPHLDKPFELGAQTSSLLAPLHNSKHDPTLLPASIGKRLRFR 1353
Query: 2441 HSDSPYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQA 2620
HS++PY I+PRDE+LG LL+E CRAYRR P + PFDP L+AECI+LNE+AQLSSKTQA
Sbjct: 1354 HSEAPYVIAPRDEILGSLLYEAWCRAYRRSPRDVEPFDPDLYAECINLNEFAQLSSKTQA 1413
Query: 2621 VIMGNAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKY 2800
IM NA RSDPDWR+SAVRIF+KTQHKVNEGSLFGSWKACQTLALMHD VVL+LGPVKKY
Sbjct: 1414 TIMANANRSDPDWRWSAVRIFAKTQHKVNEGSLFGSWKACQTLALMHDAVVLLLGPVKKY 1473
Query: 2801 QRVFDSADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKK 2980
QR FD DRP +Y+HAG+TPF+++DWCRAHLTP+V LANDYTAFDQSQHGEAVV ER K
Sbjct: 1474 QRFFDQRDRPSTLYVHAGHTPFEMADWCRAHLTPAVKLANDYTAFDQSQHGEAVVFERYK 1533
Query: 2981 MERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGAC 3160
M RLSIP L+DLHV+LK NVSTQFGPLTCMRLTGEPGTYDDN+DYN+AV+H EYAVG+
Sbjct: 1534 MNRLSIPAELVDLHVYLKTNVSTQFGPLTCMRLTGEPGTYDDNTDYNIAVLHLEYAVGST 1593
Query: 3161 PVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALF 3340
P+MVSGDDSLLD EP RD+W+A+ P+LAL FKKER RYATFCGYY GFTGAVRSP ALF
Sbjct: 1594 PLMVSGDDSLLDSEPPVRDQWSAIAPMLALTFKKERGRYATFCGYYVGFTGAVRSPPALF 1653
Query: 3341 AKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQ 3520
AK+ IA+DD SISDK+ +YL EF++GHS GD W +LPVE V +QSA FDFFCR A +
Sbjct: 1654 AKLMIAVDDGSISDKLIAYLTEFTVGHSSGDAFWTILPVEAVPYQSACFDFFCRRAPAQA 1713
Query: 3521 KIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQ 3700
K+ LRLGE ES+L F G KW +++ ++L+ S+ R Q+LHSSR+ RSLPEDPE+S LQ
Sbjct: 1714 KVMLRLGEAPESLLSLAFEGLKWASHSVYALMNSSHRRQLLHSSRRPRSLPEDPEVSQLQ 1773
Query: 3701 GQLLKSFQ-----------------PSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
G+LL FQ P SMA +
Sbjct: 1774 GELLHQFQSLHLPLRGGLMPNPLAAPFRLLQQSSSLGPTYAVAPIARAPQVPLPSMADNA 1833
Query: 3830 NLGGGAPP-DSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDLAAS 4006
G PP D RV QPPLP P++ ET P ++D+PFQW+ G T DL+AS
Sbjct: 1834 TQVGPVPPRDDRVDRQPPLPDPPRVLETTPSHFLDLPFQWKVTDFTGYAAYHGTDDLSAS 1893
Query: 4007 TTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGRFL 4186
+ TL A YRHAEL VE P +FSKP+ +VVWT A+++PA +ET YYGGR +
Sbjct: 1894 AVLTTLCAPYRHAELLYVEISVAPCPPSFSKPIMFTVVWTPATLSPADGKETDYYGGRQI 1953
Query: 4187 TVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYS-NSGTTGVPLAYVLVRG 4363
TVGGPVLL ST VPADL R+NP IK+SV++ DTPR + + G T +PLA VRG
Sbjct: 1954 TVGGPVLLSSTTAVPADLARMNPFIKSSVSYNDTPRWTMSVPPVTGGDTKIPLATAFVRG 2013
Query: 4364 IIRLSGPAG 4390
I+R+S P+G
Sbjct: 2014 IVRVSAPSG 2022
>YP_004464920.1 polyprotein [Switchgrass mosaic virus] AEE25899.3 polyprotein
[Switchgrass mosaic virus]
Length = 2061
Score = 1511 bits (3913), Expect = 0.0
Identities = 775/1377 (56%), Positives = 968/1377 (70%), Gaps = 29/1377 (2%)
Frame = +2
Query: 347 PLDPE--MASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCL 520
P +PE +A L DP+ GPI F L PG YL +G F+ RNS + YP CL
Sbjct: 695 PREPESALARLEVDPTASGPIMEFRDLQPGLYLGTTGSFLTRARNSVSSTIQYPARAACL 754
Query: 521 LIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNG 700
L+A+ AT + TA LW L + LPDS++ + + R GL+TDHF VLAR +SLRC F S+
Sbjct: 755 LVAVRNATSLPTATLWAALAANLPDSILDDGSLVRLGLTTDHFAVLARIFSLRCRFVSDH 814
Query: 701 HSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL---HQAPTPTSGGHL-AEDLASSAFNFR 868
+G++DATS F IRH T GHF L+ + P + DLA S F
Sbjct: 815 IDVELGVADATSRFTIRH------TPGHFELVADDYSLPALVGASTIPGADLAESCKRFV 868
Query: 869 CQGN-LLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMD 1045
+LPFR VH + ++V+RAKNLISNMKNGFDGV+A +P AR+R L LD +D
Sbjct: 869 ASDRTVLPFRDVHIHRTSVKRAKNLISNMKNGFDGVMAQANPLDPKSARERFLMLDSCLD 928
Query: 1046 IAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASR 1225
IA R +RLIHIAGF GCGKS+P+ QLLKTPAF +KL+VPT ELR+EWK M+ +
Sbjct: 929 IAAPRVVRLIHIAGFAGCGKSWPVAQLLKTPAFRTFKLAVPTTELRDEWKGLMEPRDQDK 988
Query: 1226 WRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPN 1405
WR GTWESSLLKSAR LVIDE+YKMPRGYLDLAIHAD++I+ VI LGDP+QGEYHS++P+
Sbjct: 989 WRFGTWESSLLKSARTLVIDEVYKMPRGYLDLAIHADASIQFVILLGDPIQGEYHSTHPS 1048
Query: 1406 SSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLL 1585
SSN+R+ E +L+P++D YC+WS R+PQ +A + VPS++ G+A + + P N ++L
Sbjct: 1049 SSNARLSPEHVYLRPYIDFYCFWSRRIPQYVATILGVPSTSKVSGYARHSSQFPLNGKIL 1108
Query: 1586 TNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGIL 1765
++ S K+L DCG+ A TIASSQGST +G IHLD ++R LSH HSLVA+TRSR+G++
Sbjct: 1109 ISAMTSAKSLVDCGYQAITIASSQGSTVNGPVHIHLDNHARRLSHQHSLVAITRSRAGLV 1168
Query: 1766 FTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDA 1945
FTGD S+ DGTS+SNL+FSA++ I +++LF P+CP V +P SR L G+G
Sbjct: 1169 FTGDPSVADGTSSSNLLFSAVLMNHPISVRSLFSALLPRCPFVESPPTSRSVLLRGAGYG 1228
Query: 1946 PRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETR 2125
+A P LRPR + + P F+GDV DL APFLGDGS+NAP V F+PE+R
Sbjct: 1229 -----SAPP----LRPR--ESPPMRPDFQGDVIADLSAPFLGDGSSNAPQVSTHFLPESR 1277
Query: 2126 RPLHFDLASAVPSVISLA-SARCSATPIEPVYPGCNWESIAADFMPAHDPLVKEIAWKDR 2302
RPLHFD+ SA V SA IEPVYPG ++E +AA F+P D KEI ++
Sbjct: 1278 RPLHFDVPSARHQVADHPLKPDHSACAIEPVYPGESFEQLAALFLPPTDAESKEIRFRGE 1337
Query: 2303 VSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEV 2482
+SNQFP+LD PF ISAQP SLLA VHNSK+D TLLPASI+KRLRFRH+DS YTIS RDE+
Sbjct: 1338 LSNQFPHLDKPFEISAQPSSLLAPVHNSKHDPTLLPASIAKRLRFRHNDSAYTISARDEI 1397
Query: 2483 LGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWR 2662
LG LL+E CRAYRR P I PFDP+L+AECI+LNE+AQLSSKTQA IM NA RSDPDWR
Sbjct: 1398 LGGLLYEAWCRAYRRSPLDIEPFDPVLYAECINLNEFAQLSSKTQATIMANANRSDPDWR 1457
Query: 2663 YSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIY 2842
+SAVRIF+KTQHKVNEGSLFGSWKACQTLALMHD VVL+LGPVKKYQRVFD DRP H+Y
Sbjct: 1458 WSAVRIFAKTQHKVNEGSLFGSWKACQTLALMHDAVVLLLGPVKKYQRVFDQRDRPSHLY 1517
Query: 2843 IHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLH 3022
+HAG+TPF++++WC+ HLTP++ LANDYTAFDQSQHGEAVV ER KM RLSIP LIDLH
Sbjct: 1518 VHAGHTPFEMAEWCQQHLTPAIKLANDYTAFDQSQHGEAVVFERFKMSRLSIPQELIDLH 1577
Query: 3023 VHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFE 3202
V+LK NVSTQFGPLTCMRLTGEPGTYDDN+DYN+AV+H EYAVG+ P+MVSGDDSLLD E
Sbjct: 1578 VYLKTNVSTQFGPLTCMRLTGEPGTYDDNTDYNIAVLHLEYAVGSTPLMVSGDDSLLDSE 1637
Query: 3203 PQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISD 3382
P RD+W AV+P+LAL FKKER RYATFCGYY GFTGAVRSP ALFAK+ IA+DD SI D
Sbjct: 1638 PPVRDQWAAVEPMLALTFKKERGRYATFCGYYVGFTGAVRSPPALFAKLMIAVDDESIDD 1697
Query: 3383 KIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESIL 3562
K+ +YL EF++GHSLGD W +LPVE V +QSA FDFFCR A + K+ LRLGE ES+L
Sbjct: 1698 KLIAYLTEFTVGHSLGDAFWTILPVETVPYQSACFDFFCRRAPAQAKVMLRLGEAPESLL 1757
Query: 3563 LRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQPSEXXX 3742
F G KW +++ ++L+ S+ R Q+LHSSR+ RSLPEDPE+S LQG+LL FQ
Sbjct: 1758 SMAFQGLKWASHSVYALMNSSHRRQLLHSSRRPRSLPEDPEVSQLQGELLHQFQSLHLPL 1817
Query: 3743 XXXXXXXXXXXXXXXXXXXXXNL-------------------SMAHHENLGGGAPP-DSR 3862
+L SMA + G AP D R
Sbjct: 1818 RGASMPNPLAAPFRLLPLGSASLGPSYSVAPLQPPPASESPDSMAENATQVGPAPARDDR 1877
Query: 3863 VVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRH 4042
+ QP +P P++ ET P Y+D+PFQW+ G T DL+AS + TL A YRH
Sbjct: 1878 LDRQPAIPAPPRVVETAPTHYIDLPFQWKITDFTGAAAYHDTGDLSASPVLTTLCAPYRH 1937
Query: 4043 AELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTA 4222
AEL SVE P +F+KP+ +VVWT A+++P +ET +YGGR +++GGPV+L ST
Sbjct: 1938 AELISVELSLAPCPPSFTKPIMFTVVWTPATLSPTDGKETDFYGGRQISIGGPVMLSSTT 1997
Query: 4223 IVPADLTRLNPIIKTSVAFADTPRLSFTAYS-NSGTTGVPLAYVLVRGIIRLSGPAG 4390
+PADLTR+NP+IK+SVA+ DTPR + + + + G T V LA +RG+IR+S P+G
Sbjct: 1998 AIPADLTRMNPVIKSSVAYRDTPRWTMSVPAVSGGDTKVNLATGFIRGVIRVSAPSG 2054
>NP_115454.1 polyprotein [Maize rayado fino virus] Q91TW9.1 RecName: Full=Genome
polyprotein; Includes: RecName: Full=RNA-directed RNA
polymerase; Includes: RecName: Full=Helicase; Includes:
RecName: Full=Methyltransferase; Contains: RecName:
Full=RNA replication protein; Contains: RecName:
Full=Capsid protein CP1; Short=CP1; AltName: Full=Coat
protein AAK52838.1 polyprotein [Maize rayado fino virus]
Length = 2027
Score = 1510 bits (3909), Expect = 0.0
Identities = 773/1389 (55%), Positives = 962/1389 (69%), Gaps = 26/1389 (1%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
+ + G V +P +P+ A L +DPS GP+ F L G+Y+ +G F+ RNS
Sbjct: 651 ESTQGTVFAVTPGPRAPEPDTARLDADPSASGPVMEFRELQKGAYIEPTGAFLTRARNSV 710
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ PYP CLL+A+S+ATG+ T LW L + LPDS++ + ++ GL+TDHF VLA
Sbjct: 711 SSSIPYPTRAACLLVAVSQATGLPTRTLWAALCANLPDSVLDDGSLATLGLTTDHFAVLA 770
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL---HQAPTPTSGGHL 832
R +SLRC F S +G+ DATS F IRH T GHF L+ P +
Sbjct: 771 RIFSLRCRFVSEHGDVELGLHDATSRFTIRH------TPGHFELVADNFSLPALVGASSV 824
Query: 833 -AEDLASSAFNFRCQGN-LLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNE 1006
DLA + F +LPFR VH + ++VRRAKNLISNMKNGFDGV+A +P
Sbjct: 825 PGADLAEACKRFVAPDRTVLPFRDVHIHRTDVRRAKNLISNMKNGFDGVMAQANPLDPKS 884
Query: 1007 ARDRLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRN 1186
AR+R L LD +DIA RR+RLIHIAGF GCGKS+PI LL+TPAF +KL+VPT ELR+
Sbjct: 885 ARERFLMLDSCLDIAAPRRVRLIHIAGFAGCGKSWPISHLLRTPAFRVFKLAVPTTELRD 944
Query: 1187 EWKDSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALG 1366
EWK M +WR GTWESSLLK+ARVLVIDE+YKMPRGYLDLAIHAD+AI+ VI LG
Sbjct: 945 EWKALMDPRDQDKWRFGTWESSLLKTARVLVIDEVYKMPRGYLDLAIHADAAIQFVILLG 1004
Query: 1367 DPLQGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFA 1546
DP+QGEYHS++P+SSN+R+ E R+L+P++D YC+WS R+PQN+A + VP+++ GFA
Sbjct: 1005 DPIQGEYHSTHPSSSNARLSPEHRYLRPYVDFYCFWSRRIPQNVARVLDVPTTSTEMGFA 1064
Query: 1547 SYRPELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSH 1726
Y + P + ++L +++ S K+L DCG+ A TIASSQGST G A +HLD +SR LSH H
Sbjct: 1065 RYSQQFPFSGKILISARDSAKSLADCGYHAVTIASSQGSTIAGPAYVHLDNHSRRLSHQH 1124
Query: 1727 SLVAVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPL 1906
SLVA+TRS+SGI+FTGDK+ DGTS++NL+FSA++ +R+ +++LF P CP V P
Sbjct: 1125 SLVAITRSKSGIVFTGDKAAADGTSSANLLFSAVLLDRRLSVRSLFSALLPCCPFVTEPP 1184
Query: 1907 KSRRAGLSGSGDAPRVQFTADPHSLFLRP-RLANARGITPAFKGDVAIDLRAPFLGDGSA 2083
SR L G+G RP R +A + P + GDV +D AP LGDGSA
Sbjct: 1185 TSRAVLLRGAGYG------------IARPLRARDAPPLGPDYVGDVILDSSAPILGDGSA 1232
Query: 2084 NAPSVEPSFVPETRRPLHFDLASAVPSVISLASARC-SATPIEPVYPGCNWESIAADFMP 2260
NAP V F+PETRRPLHFD+ SA V A SA IEPVYPG ++ES+A+ F+P
Sbjct: 1233 NAPQVSTHFLPETRRPLHFDIPSARHQVADHPLAPDHSACAIEPVYPGESFESLASLFLP 1292
Query: 2261 AHDPLVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFR 2440
D KE ++ +SNQFP+LD PF + AQ SLLA +HNSK+D TLLPASI KRLRFR
Sbjct: 1293 PTDAESKETYFRGEMSNQFPHLDKPFELGAQTSSLLAPLHNSKHDPTLLPASIGKRLRFR 1352
Query: 2441 HSDSPYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQA 2620
HS++PY I+PRDE+LG LL+E CRAY R P + PFDP L+AECI+LNE+AQLSSKTQA
Sbjct: 1353 HSEAPYVIAPRDEILGSLLYEAWCRAYHRSPRDVEPFDPDLYAECINLNEFAQLSSKTQA 1412
Query: 2621 VIMGNAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKY 2800
IM NA RSDPDWR+SAVRIF+KTQHKVNEGSLFGSWKACQTLALMHD VVL+LGPVKKY
Sbjct: 1413 TIMANANRSDPDWRWSAVRIFAKTQHKVNEGSLFGSWKACQTLALMHDAVVLLLGPVKKY 1472
Query: 2801 QRVFDSADRPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKK 2980
QR FD DRP +Y+HAG+TPF+++DWCRAHLTP+V LANDYTAFDQSQHGEAVV ER K
Sbjct: 1473 QRFFDQRDRPSTLYVHAGHTPFEMADWCRAHLTPAVKLANDYTAFDQSQHGEAVVFERYK 1532
Query: 2981 MERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGAC 3160
M RLSIP L+DLHV+LK NVSTQFGPLTCMRLTGEPGTYDDN+DYN+AV+H EYAVG+
Sbjct: 1533 MNRLSIPAELVDLHVYLKTNVSTQFGPLTCMRLTGEPGTYDDNTDYNIAVLHLEYAVGST 1592
Query: 3161 PVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALF 3340
P+MVSGDDSLLD EP RD+W+A+ P+LAL FKKER RYATFCGYY GFTGAVRSP ALF
Sbjct: 1593 PLMVSGDDSLLDSEPPVRDQWSAIAPMLALTFKKERGRYATFCGYYVGFTGAVRSPPALF 1652
Query: 3341 AKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQ 3520
AK+ IA+DD SISDK+ +YL EF++GHS GD W +LPVE V +QSA FDFFCR A +
Sbjct: 1653 AKLMIAVDDGSISDKLIAYLTEFTVGHSSGDAFWTILPVEAVPYQSACFDFFCRRAPAQA 1712
Query: 3521 KIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQ 3700
K+ LRLGE ES+L F G KW +++ ++L+ S+ R Q+LHSSR+ RSLPEDPE+S LQ
Sbjct: 1713 KVMLRLGEAPESLLSLAFEGLKWASHSVYALMNSSHRRQLLHSSRRPRSLPEDPEVSQLQ 1772
Query: 3701 GQLLKSFQ-----------------PSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
G+LL FQ P SMA +
Sbjct: 1773 GELLHQFQSLHLPLRGGHMPNPLAAPFRLLQQSSSLGPTYAVAPIARAPQVPPPSMADNA 1832
Query: 3830 NLGGGAPP-DSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDLAAS 4006
G PP D RV QPPLP P++ ET P ++D+PFQW+ G T DL AS
Sbjct: 1833 TQVGPVPPRDDRVDRQPPLPDPPRVLETAPSHFLDLPFQWKVTDFTGYAAYHGTDDLVAS 1892
Query: 4007 TTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGRFL 4186
+ TL A YRHAEL VE P +FSKP+ +VVWT A+++P +ET YYGGR +
Sbjct: 1893 AVLTTLCAPYRHAELLYVEISVAPCPPSFSKPIMFTVVWTPATLSPRDGKETDYYGGRQI 1952
Query: 4187 TVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYS-NSGTTGVPLAYVLVRG 4363
TVGGPV+L ST VPADL R+NP IK+SV++ DTPR + + + G T +PLA VRG
Sbjct: 1953 TVGGPVMLSSTTAVPADLARMNPFIKSSVSYNDTPRWTMSVPAVTGGDTKIPLATAFVRG 2012
Query: 4364 IIRLSGPAG 4390
I+R+ P+G
Sbjct: 2013 IVRVRAPSG 2021
>AQQ11758.1 replicase polyprotein [Peach virus D]
Length = 2066
Score = 1472 bits (3810), Expect = 0.0
Identities = 763/1363 (55%), Positives = 959/1363 (70%), Gaps = 12/1363 (0%)
Frame = +2
Query: 347 PLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAPTPYPQGRDCLLI 526
P+ E+++L DP+ GP+ F L+PG+YL + F RN A PYP+ DCLL
Sbjct: 717 PIPDEISALLKDPTAAGPVLQFHQLHPGAYLEATAAFPARARNGLPATFPYPRN-DCLLR 775
Query: 527 AISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFYSLRCTFHSNGHS 706
I AT I AALWE L LPDS+I I R+GLST HF+VLARF+SLR TF + G
Sbjct: 776 TIHAATHIPLAALWECLCVQLPDSVIDYPLIERRGLSTLHFSVLARFFSLRATFLTPGWK 835
Query: 707 QIMGMSDATSSFAIRHDAPTSLTMGHFTLL---HQAPTPTSGGHLAEDLASSAFNFRCQG 877
Q +GM DAT +F + H PT+ T+GHF L+ +AP G A+DLA A +FR G
Sbjct: 836 QPLGMEDATQTFTVLHTPPTATTIGHFELVADGSEAPPAQLAGAGAKDLALIALSFRTGG 895
Query: 878 NLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLSLDGVMDIAES 1057
+LLP VH Y + RAKNLISNMKNGFDGVLANIDP T+EARDRLLSLDG+MD+A
Sbjct: 896 HLLPIAHVHNYTTAPSRAKNLISNMKNGFDGVLANIDPHRTHEARDRLLSLDGIMDLAPP 955
Query: 1058 RRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQVPPASRWRLG 1237
+++ LIHIAGF GCGKSYPIQ+LL PAF K+++PTVELRNEWK +M+ PA WR+
Sbjct: 956 KQVALIHIAGFAGCGKSYPIQKLLTHPAFAQHKIALPTVELRNEWKAAMKPRPAQVWRIS 1015
Query: 1238 TWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEYHSSNPNSSNS 1417
TWESSLLKSARVLVIDE+YK+PRGY+DLAIHAD ++E VI LGDPLQGEYHS++P+SSN
Sbjct: 1016 TWESSLLKSARVLVIDEVYKLPRGYVDLAIHADPSVEFVILLGDPLQGEYHSTHPDSSNH 1075
Query: 1418 RILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELPRNCRLLTNSQ 1597
R+ SE++HL+P++D YC WS R+P+ IA FQ+ + + APG+ Y + +LL NS
Sbjct: 1076 RLSSELKHLRPYLDYYCLWSRRIPKLIADFFQISTLSEAPGYVRYMRSFSASAKLLANSI 1135
Query: 1598 ASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTRSRSGILFTGD 1777
+ KTL GF+A TI+SSQGST DG A IHLD++S LLSH HSLVA+TRSR+G++FTGD
Sbjct: 1136 PTAKTLQQVGFNAITISSSQGSTLDGPAFIHLDRHSNLLSHHHSLVALTRSRAGVVFTGD 1195
Query: 1778 KSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGLSGSGDAPRVQ 1957
+SLL G S+SNL+FSAL + + L ALF EF P + APL +RR LSG
Sbjct: 1196 RSLLSGLSSSNLIFSALAANKPVSLLALFPSEFYGLPTITAPLTNRRLVLSGG------- 1248
Query: 1958 FTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPSFVPETRRPLH 2137
DP++ L R G +P+ + DV + A GDG V+ +F+PETRRPLH
Sbjct: 1249 ---DPYAHRLPIRGPTDPGPSPSTRDDVLLTQEAIVSGDGELALQRVDTTFLPETRRPLH 1305
Query: 2138 FDLASAVPSVISLASARCSATPIEPVYPGCNWESIAADFMPAHDPLVKEIAWKDRVSNQF 2317
D+ SA+P + + S T EPVYPG ++ ++AA F PA+DP +EI ++D++S QF
Sbjct: 1306 QDVPSAMPEPAQPSPIKFSDTAFEPVYPGEDFYALAAHFQPANDPETREILFRDQMSCQF 1365
Query: 2318 PYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTISPRDEVLGQLL 2497
P+LD PF IS QPMSLLAA H K D TLLPASI KRLRFR S++PY I+P+DE+LG LL
Sbjct: 1366 PFLDEPFEISCQPMSLLAARHREKKDPTLLPASIPKRLRFRPSNAPYQITPKDEILGGLL 1425
Query: 2498 FEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAERSDPDWRYSAVR 2677
F LCRAYRR+PN +PFD LFAECI LNE+AQL+SKTQA IM NA RSDPDWRYSAVR
Sbjct: 1426 FNSLCRAYRRNPNDTVPFDEALFAECIALNEFAQLTSKTQATIMANANRSDPDWRYSAVR 1485
Query: 2678 IFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSADRPDHIYIHAGN 2857
IF+KTQHKVN+ S+FGSWKACQTLALMHD VVL+LGPVKKYQRVFD DRP HIY+HA +
Sbjct: 1486 IFAKTQHKVNDASIFGSWKACQTLALMHDAVVLLLGPVKKYQRVFDQEDRPSHIYVHASH 1545
Query: 2858 TPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKC 3037
TPF++S+WC+A+LT +VHLANDYTAFDQSQHGEAVVLERKKMERLSIP HLI+LHVHLK
Sbjct: 1546 TPFEMSEWCQANLTDAVHLANDYTAFDQSQHGEAVVLERKKMERLSIPEHLIELHVHLKT 1605
Query: 3038 NVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRD 3217
NVSTQFGPLTCMRLTGEPGTYDDN+DYN+AVI++EYA + P+MVSGDDSLLDFEP T
Sbjct: 1606 NVSTQFGPLTCMRLTGEPGTYDDNTDYNIAVIYSEYACDSVPLMVSGDDSLLDFEPPTLP 1665
Query: 3218 EWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASY 3397
W A++PLLAL FKKER+ Y TFCG+ G GA+R+P LFAKI IAIDD SI +K+ASY
Sbjct: 1666 NWAAIRPLLALTFKKERSLYPTFCGFNVGRAGALRAPRTLFAKIAIAIDDGSIDEKLASY 1725
Query: 3398 LAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGEVDESILLRLFS 3577
L EFS+GHSLGD WQ+LP++ V +QSA FDFFCR A+ QK+ L++GE+ +L F
Sbjct: 1726 LTEFSVGHSLGDQLWQLLPIDAVPYQSACFDFFCRKATPAQKLVLKIGEIPMELLEAAFE 1785
Query: 3578 GAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQPSE----XXXX 3745
A W ++A ++LL A + +I+ ++R+SR +PE ++S+ QG+L +FQ +
Sbjct: 1786 DAPWASHAVWALLRGANKSKII-AARKSRPMPESSDVSMHQGRLPSTFQGFQTHPLMTLS 1844
Query: 3746 XXXXXXXXXXXXXXXXXXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKISETPP--- 3916
+S A +G D RV Q PLP AP PP
Sbjct: 1845 GAQSAANIALLVSSAVPDLEPMSNAQVPQVGPRPDSDVRVDRQLPLP-APHPGPPPPLPS 1903
Query: 3917 -GPYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAAAAF 4093
P V VPFQW DG ST DL+ASTT+K +TA +R+A ++SVEA AAA
Sbjct: 1904 KNPDVIVPFQWVISDFDGTDLVHSTIDLSASTTLKKVTAYFRYASVQSVEALIIADAAAI 1963
Query: 4094 SKPLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIKTSV 4273
SKP+ +S+VWTI S+TP + +E Y+GG+ + GGPV L + ++PADLTRL PIIK V
Sbjct: 1964 SKPIPVSLVWTINSLTPDSGKELDYFGGQRIVAGGPVSLATRNVIPADLTRLTPIIKDRV 2023
Query: 4274 AFADTPRLSFTAYSNSGTT-GVPLAYVLVRGIIRLSGPAGNKL 4399
++DTPRL++TA +G G L +++ G + LS P G +
Sbjct: 2024 TYSDTPRLTWTAQKVAGAAKGTTLCSLVIVGTVLLSAPTGTSI 2066
>AOX49247.1 polyprotein, partial [Grapevine rupestris vein feathering virus]
Length = 2112
Score = 1436 bits (3717), Expect = 0.0
Identities = 739/1359 (54%), Positives = 943/1359 (69%), Gaps = 2/1359 (0%)
Frame = +2
Query: 311 TGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSSKAP 490
TG ++ +PA ++PE A L D S G ++ F+SL+PGSYLP SG F R SS +P
Sbjct: 781 TGTLTHTTPAPVAVEPETAPLMLDASGAGAVAPFSSLHPGSYLPFSGVFSTRLRVSSLSP 840
Query: 491 TPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLARFY 670
YP DCLL+++S ATG +LW++L LPDS + +I QGLSTDHF LA +
Sbjct: 841 AAYP-ALDCLLVSVSGATGFPKESLWQSLCGILPDSQLDNDQIRTQGLSTDHFCALAFLH 899
Query: 671 SLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLLHQAPTPT-SGGHLAEDLA 847
SLRCTF ++ Q MGM DATS F IRH TS + GHF L+ + P +G A D+
Sbjct: 900 SLRCTFLTDAGQQEMGMEDATSVFTIRH---TSGSPGHFELVRSSARPLLNGARPAADIV 956
Query: 848 SSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARDRLLS 1027
F+ G +LPF HTY S+V RAKNLISNMKNGFDGVLANIDP HTNEARDRLLS
Sbjct: 957 DHMKRFKVDGKILPFCEAHTYTSHVNRAKNLISNMKNGFDGVLANIDPQHTNEARDRLLS 1016
Query: 1028 LDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWKDSMQ 1207
LDG +D+A+ R + LIHIAGF GCGKSYPI QLLKT N+K++VPTVELRNEWKDS++
Sbjct: 1017 LDGSLDVAKPRTVSLIHIAGFAGCGKSYPICQLLKTKPCRNYKIAVPTVELRNEWKDSLK 1076
Query: 1208 VPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPLQGEY 1387
PA RWRLGTWESSLLKSAR++VIDE+YK+PRGYLDLAIHADS ++ I LGDPLQGEY
Sbjct: 1077 SSPADRWRLGTWESSLLKSARIVVIDEVYKLPRGYLDLAIHADSTAQLFIVLGDPLQGEY 1136
Query: 1388 HSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYRPELP 1567
HS+NPNSSN+R+ SEI+HLQPFMD+YC WS R+P+N+A F+V +++ G + L
Sbjct: 1137 HSTNPNSSNARLSSEIKHLQPFMDMYCMWSHRIPRNVARFFRVHTTSQVEGSVTTSLILA 1196
Query: 1568 RNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLVAVTR 1747
+ LTNS + +TLNDCGF+A TIASSQGSTY A I+LDKNS LSH+HSLVA+TR
Sbjct: 1197 PGWKQLTNSMNAARTLNDCGFAATTIASSQGSTYSHPACINLDKNSSQLSHAHSLVALTR 1256
Query: 1748 SRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSRRAGL 1927
S+ GI+FTGD S L+ S+SNL+FS + + +DL++LF EFP CP + PL +R
Sbjct: 1257 SKVGIMFTGDLSRLNPGSSSNLLFSKFKQGESVDLRSLFPFEFPCCPTITEPLSTRPKFC 1316
Query: 1928 SGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPSVEPS 2107
G AP +L + ++ + P+ D+ + + LG G NAP V
Sbjct: 1317 LGG--AP-----------WLASKHFHSAALGPSDLPDLLLPEASIVLGSGDNNAPQVSTH 1363
Query: 2108 FVPETRRPLHFDLASAVPSVISLASA-RCSATPIEPVYPGCNWESIAADFMPAHDPLVKE 2284
F+PE+RRPLHFD+ASA+P + I PVYPG ++E+++ F+PAHDP KE
Sbjct: 1364 FLPESRRPLHFDVASAIPEPAKPSGVDSLDLASITPVYPGESFENLSRHFLPAHDPESKE 1423
Query: 2285 IAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDSPYTI 2464
I + +++SNQFP++D F +SAQ SLLA VH++ D TLL ASISKRLRFR S +PY I
Sbjct: 1424 IWYNNQLSNQFPHMDKEFHLSAQSSSLLAPVHSTARDPTLLKASISKRLRFRPSSAPYRI 1483
Query: 2465 SPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMGNAER 2644
+P+DE+LG LLFE C A R P+A IPFD LFAECI LNEYAQL+SKTQA+IM N +R
Sbjct: 1484 TPKDEILGSLLFEAHCSAMLRSPSASIPFDENLFAECIALNEYAQLTSKTQAIIMANRDR 1543
Query: 2645 SDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVFDSAD 2824
SDPDWR+SAVRIF+KTQHKVN+ S+FG WKACQTLALMHD VVL+LGPVKKYQR+FD+AD
Sbjct: 1544 SDPDWRWSAVRIFAKTQHKVNDHSIFGDWKACQTLALMHDAVVLLLGPVKKYQRIFDAAD 1603
Query: 2825 RPDHIYIHAGNTPFQLSDWCRAHLTPSVHLANDYTAFDQSQHGEAVVLERKKMERLSIPT 3004
RP +I+++AG+TP +++DWCR+HL P +ANDYT+FDQSQHGEAVV ERKKMERL+IP
Sbjct: 1604 RPSNIFVYAGHTPSEMADWCRSHLKPGERVANDYTSFDQSQHGEAVVFERKKMERLNIPA 1663
Query: 3005 HLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIHTEYAVGACPVMVSGDD 3184
HLIDLHV LK NVSTQFGPLTCMRLTGEPGTYDDN+DYNLAV+H EY VG+ P MVSGDD
Sbjct: 1664 HLIDLHVQLKTNVSTQFGPLTCMRLTGEPGTYDDNTDYNLAVLHLEYLVGSTPCMVSGDD 1723
Query: 3185 SLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFCGYYTGFTGAVRSPLALFAKICIAID 3364
SLL EP W AVKPLL+LRFKKER RY FCGYY G G +RSP+ALFAK+ + +D
Sbjct: 1724 SLLGREPPRNPIWPAVKPLLSLRFKKERTRYGEFCGYYVGCEGCIRSPVALFAKLMVCVD 1783
Query: 3365 DNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVLFQSAIFDFFCRNASREQKIALRLGE 3544
D +I +K+ SY EFSIGHSLGD W +LP+E V +QSA+FDFFCR+AS + K+ +LG
Sbjct: 1784 DGTIDEKLLSYATEFSIGHSLGDSFWNLLPIESVPYQSAVFDFFCRHASEDIKVMFKLGR 1843
Query: 3545 VDESILLRLFSGAKWIANATFSLLPSAFRHQILHSSRQSRSLPEDPEISLLQGQLLKSFQ 3724
V+ S+ L W++ +T+S+L S R + + + + E++ LQG+LL +F
Sbjct: 1844 VEISLFSHLLHKLSWLSYSTYSMLNSLQRRALRGKAVRQHFPGDSKEVTELQGELLHTFS 1903
Query: 3725 PSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHENLGGGAPPDSRVVAQPPLPLAPKIS 3904
S + A G + D R QP LPLAPK+
Sbjct: 1904 MSSTPRVLTGGLLLPTPAPMS--------NEAQLPTSGRPSRDDHRSDPQPALPLAPKVQ 1955
Query: 3905 ETPPGPYVDVPFQWQSMSLDGKTNNFSTTDLAASTTIKTLTAQYRHAELRSVEAEFCPAA 4084
E+ P + +PFQW ++ + + F T DLAAS T+K LT +R E+ ++E P
Sbjct: 1956 ES-PALSLAIPFQWVALIIKSDSAAF-TVDLAASNTLKKLTDPFRSCEITNLEVVLMPTL 2013
Query: 4085 AAFSKPLSISVVWTIASITPATAEETGYYGGRFLTVGGPVLLGSTAIVPADLTRLNPIIK 4264
AF+ P+++ VWT+ SI PA+ +E YYGG+ +T GGPV + + A VPADLTR+NP IK
Sbjct: 2014 NAFNNPVTLHCVWTVNSIQPASGDELLYYGGQAITAGGPVSMNALATVPADLTRINPRIK 2073
Query: 4265 TSVAFADTPRLSFTAYSNSGTTGVPLAYVLVRGIIRLSG 4381
+SV + DTPRL+ T + +PLAYV++RG++ +SG
Sbjct: 2074 SSVGYLDTPRLTGTTMKCATAQTLPLAYVMIRGMVSVSG 2112
>ANP94321.1 putative 230 kDa polyprotein [Grapevine Syrah virus 1]
Length = 2081
Score = 1404 bits (3634), Expect = 0.0
Identities = 739/1394 (53%), Positives = 934/1394 (67%), Gaps = 28/1394 (2%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST S ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGYVSTPSAEPGLVEPEHSPLAADSSATGEVSEFFNLHPADWIAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 ISGAKYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + TP G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHTPESATAPGHFSLRADERQHTPPLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y +NV RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTNVARAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPQDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQP+MD YC WS RVPQ+I A F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPYMDYYCLWSHRVPQDIGAFFGIKSTSTVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPGNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYSAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TRS+SG++FTGDK +L+ NL+FS+ + +++DL+ALF EFP CP++ PLK R
Sbjct: 1207 ALTRSKSGVIFTGDKRVLEAPG-GNLLFSSYFQDKKVDLRALFPTEFPCCPILLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G P T R P + DV ++ A GDGS+NAP
Sbjct: 1266 PTDLTGGAPFPFRDET---------------RVFNPERRDDVFVE-AAVVCGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A A + T IEPVYPG +E++AA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEAPAPLTDTFIEPVYPGETFENVAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF + AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFIDQPFHVGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG +LFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSMLFEAHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRSASSPVPVMVSGDDSLIGCHPHFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLIALHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIFLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPVE V+
Sbjct: 1717 GYYVGAAGAVRMPRALFAKILIAVEDASIADKMASYATEFAIGHSLGDALWSLLPVEEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
+QSA+FDF CRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 YQSAVFDFLCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + +
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQPTLPLTGGLLLPPAVD----------APMSDD 1886
Query: 3830 NLGGGA----PPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDL 3997
+L G A PD RV QP LPLAP + ET GP + VPFQW ++ + ++ F T D
Sbjct: 1887 SLAGRARSQRDPDHRVDPQPSLPLAPSVQETSGGPAITVPFQWVALVVKSESTIF-TVDP 1945
Query: 3998 AASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGG 4177
+ ++ L YRHA L S+EA P AF P+++ +VWT+ ++ PA+ EE Y GG
Sbjct: 1946 PRAKSLTQLIGPYRHARLLSLEAILMPTLNAFQNPVTVHMVWTVNTVQPASGEELFYPGG 2005
Query: 4178 RFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLV 4357
+ LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++
Sbjct: 2006 QALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVI 2065
Query: 4358 RGIIRLSGPAGNKL 4399
RG + LSGP G +L
Sbjct: 2066 RGTLALSGPVGTRL 2079
>YP_002756536.1 putative 230 kDa polyprotein [Grapevine Syrah virus 1] ACO06249.1
putative 230 kDa polyprotein [Grapevine Syrah virus 1]
Length = 2081
Score = 1404 bits (3634), Expect = 0.0
Identities = 738/1394 (52%), Positives = 935/1394 (67%), Gaps = 28/1394 (2%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST + ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGHVSTPATEPGLVEPEHSPLAADSSATGEVSEFFNLHPADWIAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 ISGAKYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + +P G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHTPESATAPGHFSLRADERQHSPRLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y +NV RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTNVARAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPQDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQP+MD YC WS RVPQ+I F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPYMDYYCLWSHRVPQDIGTFFGIKSTSTVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPSNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYSAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TRS+SG++FTGDK +L+ NL+FS+ +++++DL+ALF EFP CP++ PLK R
Sbjct: 1207 ALTRSKSGVIFTGDKRVLEAPG-GNLLFSSYFQEKKVDLRALFPTEFPCCPILLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G P AR P + DV ++ A GDGS+NAP
Sbjct: 1266 PTDLTGGAPFPFRD---------------EARVFNPERRDDVFVE-AAVVCGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A A + T IEPVYPG +E+IAA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEAPAPLTDTFIEPVYPGETFENIAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF + AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFIDQPFHVGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG +LFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSMLFEAHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRSASSPVPVMVSGDDSLIGCHPHFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLIALHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIFLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPVE V+
Sbjct: 1717 GYYVGAAGAVRMPRALFAKIFIAVEDASIADKMASYATEFAIGHSLGDALWSLLPVEEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
+QSA+FDF CRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 YQSAVFDFLCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + +
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQPTLPLTGGLLLPPAVD----------APMSDD 1886
Query: 3830 NLGGGA----PPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDL 3997
+L G A PD RV QP LPLAP + ETP GP + VPFQW ++ + ++ F T D
Sbjct: 1887 SLAGRARSQRDPDHRVDPQPSLPLAPSVQETPGGPAITVPFQWVALVVKSESTIF-TVDP 1945
Query: 3998 AASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGG 4177
+ ++ L YRHA L S+EA P AF P+++ +VWT+ ++ PA+ EE Y GG
Sbjct: 1946 PRAKSLTQLIGPYRHARLLSLEAILMPTLNAFQNPVTVHMVWTVNTVQPASGEELFYPGG 2005
Query: 4178 RFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLV 4357
+ LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++
Sbjct: 2006 QALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVI 2065
Query: 4358 RGIIRLSGPAGNKL 4399
RG + LSGP G +L
Sbjct: 2066 RGTLALSGPVGTRL 2079
>AKQ08148.1 polyprotein [Grapevine Syrah virus 1]
Length = 2081
Score = 1404 bits (3633), Expect = 0.0
Identities = 740/1394 (53%), Positives = 937/1394 (67%), Gaps = 28/1394 (2%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST + ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGHVSTPATEPGLVEPEPSPLAADSSATGEVSEFFNLHPADWIAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 VSGAQYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + TP G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHTPESATAPGHFSLRADERQHTPPLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y +NV RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTNVARAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPQDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQPFMD YC WS RVPQ+I A F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPFMDYYCLWSHRVPQDIGAFFGIKSTSSVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPGNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYAAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TR++SG++FTGDK +L+ NL+FS+ +++++DL+ALF EFP CP++ PLK R
Sbjct: 1207 ALTRNKSGVIFTGDKRVLEAPG-GNLLFSSYFQEKKVDLRALFPTEFPCCPILLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G P D +F R + DV ++ A GDGS+NAP
Sbjct: 1266 ATDLTGGAPFP----FRDETRVFNSER-----------RDDVFVE-AAVVCGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A A + T IEPVYPG +E++AA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEAPAPLTDTFIEPVYPGETFENVAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF + AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFIDQPFHVGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG +LFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSMLFEAHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRSASSPVPVMVSGDDSLIGCHPHFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLIALHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIFLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPVE V+
Sbjct: 1717 GYYVGAAGAVRMPRALFAKILIAVEDASIADKMASYATEFAIGHSLGDALWSLLPVEEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
FQSA+FDF CRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 FQSAVFDFLCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + +
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQPTLPLTGGLLLPPAVD----------APMSDD 1886
Query: 3830 NLGGGA----PPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDL 3997
+L G A PD RV QP LPLAP + ET GP + VPFQW ++ + ++ F T D
Sbjct: 1887 SLAGRARSQRDPDHRVDPQPSLPLAPSVQETSGGPAITVPFQWVALVVKSESTIF-TVDP 1945
Query: 3998 AASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGG 4177
+ ++ L YRHA L S+EA P AF KP+++ +VWT+ ++ PA+ EE Y GG
Sbjct: 1946 PRAKSLTQLIGPYRHARLLSLEAILMPTLNAFQKPVTVHMVWTVNTVQPASGEELFYPGG 2005
Query: 4178 RFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLV 4357
+ LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++
Sbjct: 2006 QALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVI 2065
Query: 4358 RGIIRLSGPAGNKL 4399
RG + LSGP G +L
Sbjct: 2066 RGTLALSGPVGTRL 2079
>AKQ08147.1 polyprotein [Grapevine Syrah virus 1]
Length = 2081
Score = 1402 bits (3629), Expect = 0.0
Identities = 739/1394 (53%), Positives = 935/1394 (67%), Gaps = 28/1394 (2%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST + ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGHVSTPATEPGLVEPEHSPLAADSSATGEVSEFFNLHPADWIAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 ISGAKYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + TP G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHTPESATAPGHFSLRADERQHTPPLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y ++V RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTSVPRAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPHDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQPFMD YC WS RVPQ+I A F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPFMDYYCLWSHRVPQDIGAFFGIKSTSTVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPGNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYSAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TRS+SG++FTGDK +L+ NL+FS+ + +++DL+ALF EFP CP++ PLK R
Sbjct: 1207 ALTRSKSGVIFTGDKRVLEAPG-GNLLFSSYFQDKKVDLRALFPTEFPSCPVLLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G +P AR P + DV ++ + LGDGS+NAP
Sbjct: 1266 PTDLTGGAPSPFRN---------------EARVFDPQRRDDVFLE-ASIVLGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A + T IEPVYPG +E++AA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEVPAPLTDTFIEPVYPGETFENVAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF I AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFMDQPFQIGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG LLFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSLLFESHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRSASSPVPVMVSGDDSLIGCHPHFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLIALHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIFLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPVE V+
Sbjct: 1717 GYYVGAAGAVRMPKALFAKILIAVEDVSIADKMASYATEFAIGHSLGDALWSLLPVEEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
+QSA+FDF CRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 YQSAVFDFLCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + +
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQPTLPLTGGLLLPPAVD----------APMSDD 1886
Query: 3830 NLGGGA----PPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDL 3997
+L G A PD RV QP LPLAP + ET GP + VPFQW ++ + ++ F T D
Sbjct: 1887 SLAGRARSQRDPDHRVDPQPSLPLAPSVHETSGGPAITVPFQWGALVVKSESTIF-TVDP 1945
Query: 3998 AASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGG 4177
+ ++ L YRHA L S+EA P AF P+++ +VWT+ ++ PA+ EE Y GG
Sbjct: 1946 PRAKSLTQLIGPYRHARLLSLEAILMPTLNAFQNPVTVHMVWTVNTVQPASGEELFYPGG 2005
Query: 4178 RFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLV 4357
+ LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++
Sbjct: 2006 QALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVI 2065
Query: 4358 RGIIRLSGPAGNKL 4399
RG + LSGP G +L
Sbjct: 2066 RGTLALSGPVGTRL 2079
>AKQ08149.1 polyprotein [Grapevine Syrah virus 1]
Length = 2081
Score = 1399 bits (3620), Expect = 0.0
Identities = 735/1394 (52%), Positives = 935/1394 (67%), Gaps = 28/1394 (2%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST + ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGHVSTPATEPGLVEPEHSPLAADSSATGEVSEFFNLHPADWVAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 ISGAKYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + +P G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHIPESATAPGHFSLRADERLHSPPLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y +NV RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTNVARAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPQDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQP+MD YC WS RVPQ+I F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPYMDYYCLWSHRVPQDIGTFFGIKSTSSVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPGNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYSAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TRS+SG++FTGDK + + NL+FS+ +++++DL+ALF EFP CP++ PLK R
Sbjct: 1207 ALTRSKSGVIFTGDKRVPEAPG-GNLLFSSYFQEKKVDLRALFPTEFPCCPILLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G P T R P + DV ++ A GDGS+NAP
Sbjct: 1266 PTDLTGGAPFPFRDET---------------RIFNPERRDDVFVE-AAVVCGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A A + T IEPVYPG +E++AA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEAPAPLTDTFIEPVYPGETFENVAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF + AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFMDQPFHVGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG +LFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSMLFEAHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRPANSPVPVMVSGDDSLIGCHPNFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLIALHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI+ EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIYLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPV+ V+
Sbjct: 1717 GYYVGAAGAVRMPRALFAKILIAVEDASITDKMASYATEFAIGHSLGDALWSLLPVDEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
+QSA+FDF CRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 YQSAVFDFLCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + +
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQPTLPLTGGLLLPPAVD----------APMSDD 1886
Query: 3830 NLGGGA----PPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDL 3997
+L G A PD RV QP LPLAP + ETP GP + VPFQW ++ + ++ F T D
Sbjct: 1887 SLAGRARAQRDPDHRVDPQPSLPLAPSVQETPGGPAITVPFQWVALVVKSESTIF-TVDP 1945
Query: 3998 AASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGG 4177
+ ++ L YRHA L S+EA P AF P+++ +VWT+ ++ PA+ EE Y GG
Sbjct: 1946 PRAKSLTQLIGPYRHARLLSLEAILMPTLNAFQNPVTVHMVWTVNTVQPASGEELFYPGG 2005
Query: 4178 RFLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLV 4357
+ LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++
Sbjct: 2006 QALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVI 2065
Query: 4358 RGIIRLSGPAGNKL 4399
RG + LSGP G +L
Sbjct: 2066 RGTLALSGPVGTRL 2079
>ACV83739.1 replicase-associated polyprotein [Grapevine virus Q]
Length = 2081
Score = 1397 bits (3616), Expect = 0.0
Identities = 736/1393 (52%), Positives = 932/1393 (66%), Gaps = 27/1393 (1%)
Frame = +2
Query: 302 DPSTGIVSTASPAQAPLDPEMASLASDPSTQGPISTFASLYPGSYLPGSGDFICANRNSS 481
D TG VST + ++PE + LA+D S G +S F +L+P ++ + F+ R +
Sbjct: 728 DLHTGHVSTPATEPGLVEPEHSPLAADSSATGEVSEFFNLHPADWIAPTATFLARRRGET 787
Query: 482 KAPTPYPQGRDCLLIAISEATGITTAALWETLVSTLPDSLISEAEISRQGLSTDHFTVLA 661
+ YP DCLL A+S I ALW+T+ S PDS++ E +I++ GLST HF LA
Sbjct: 788 ISGAKYP-AMDCLLAAVSAGANIPKDALWKTICSYFPDSMLREEDIAKHGLSTHHFAALA 846
Query: 662 RFYSLRCTFHSNGHSQIMGMSDATSSFAIRHDAPTSLTMGHFTLL--HQAPTPTSGGHLA 835
R + L+ TFHS G+ ++G+ + SF I H ++ GHF+L + +P G A
Sbjct: 847 REHRLQATFHSAGNQFVLGVEHPSVSFHIDHTPESATAPGHFSLRADERQHSPRLLGGRA 906
Query: 836 EDLASSAFNFRCQGNLLPFRTVHTYHSNVRRAKNLISNMKNGFDGVLANIDPAHTNEARD 1015
DL +A F+ +LPF+ H Y +NV RAKNLISNMKNGFDGVLANIDPAHTNE+RD
Sbjct: 907 ADLVHAALKFKVGSAVLPFQQAHDYTTNVARAKNLISNMKNGFDGVLANIDPAHTNESRD 966
Query: 1016 RLLSLDGVMDIAESRRIRLIHIAGFPGCGKSYPIQQLLKTPAFNNWKLSVPTVELRNEWK 1195
RLLSLDG MDIA R ++LIHIAGFPGCGKSYPI QLLK+ AF ++K++VPTVELRNEWK
Sbjct: 967 RLLSLDGAMDIAAPRDVKLIHIAGFPGCGKSYPIAQLLKSRAFKHFKIAVPTVELRNEWK 1026
Query: 1196 DSMQVPPASRWRLGTWESSLLKSARVLVIDEIYKMPRGYLDLAIHADSAIEMVIALGDPL 1375
++V P WR+ TWESSLLKSAR+LVIDEIYKMPRGYLDLAIHAD I++VIALGDPL
Sbjct: 1027 GVLKVKPQDNWRISTWESSLLKSARILVIDEIYKMPRGYLDLAIHADPTIDLVIALGDPL 1086
Query: 1376 QGEYHSSNPNSSNSRILSEIRHLQPFMDLYCYWSFRVPQNIAALFQVPSSNPAPGFASYR 1555
QG YHS++ +SSN R+ SE++HLQP+MD YC WS RVPQ+I F + S++ PGF SY+
Sbjct: 1087 QGVYHSTHSDSSNHRLSSEVKHLQPYMDYYCLWSHRVPQDIGTFFGIKSTSTVPGFKSYQ 1146
Query: 1556 PELPRNCRLLTNSQASMKTLNDCGFSACTIASSQGSTYDGAASIHLDKNSRLLSHSHSLV 1735
+P N R L NSQ++ K LN CGFS+ TIASSQGSTY A IHLD++S LSH+HSLV
Sbjct: 1147 ANIPGNLRQLANSQSAAKVLNQCGFSSVTIASSQGSTYSAPACIHLDRHSMSLSHAHSLV 1206
Query: 1736 AVTRSRSGILFTGDKSLLDGTSTSNLVFSALMRQQRIDLKALFRDEFPKCPLVFAPLKSR 1915
A+TRS+SG++FTGDK +L+ NL+FS+ +++++DL+ALF EFP P++ PLK R
Sbjct: 1207 ALTRSKSGVIFTGDKRVLEAPG-GNLLFSSYFQEKKVDLRALFPTEFPCRPILLEPLKRR 1265
Query: 1916 RAGLSGSGDAPRVQFTADPHSLFLRPRLANARGITPAFKGDVAIDLRAPFLGDGSANAPS 2095
L+G P AR P + DV ++ A GDGS+NAP
Sbjct: 1266 PTDLTGGAPFPFRD---------------EARVFNPERRDDVFVE-AAVVCGDGSSNAPQ 1309
Query: 2096 VEPSFVPETRRPLHFDLASAVPSVIS-LASARCSATPIEPVYPGCNWESIAADFMPAHDP 2272
V F+PETRRPLHFDL SA P + A A + T IEPVYPG +E+IAA F+PAHDP
Sbjct: 1310 VSTHFLPETRRPLHFDLPSAKPEFAAHEAPAPLTDTFIEPVYPGETFENIAAHFLPAHDP 1369
Query: 2273 LVKEIAWKDRVSNQFPYLDVPFSISAQPMSLLAAVHNSKNDSTLLPASISKRLRFRHSDS 2452
VKEI +KD+ SNQFP++D PF + AQP SL AAVH+SK D TLL ASI KRLRFR SD+
Sbjct: 1370 EVKEILFKDQRSNQFPFIDQPFHVGAQPASLCAAVHHSKKDPTLLAASIEKRLRFRASDA 1429
Query: 2453 PYTISPRDEVLGQLLFEGLCRAYRRDPNAIIPFDPILFAECIHLNEYAQLSSKTQAVIMG 2632
PY I+ +DE+LG +LFE CRA RRDPN +PFD LFAECI LNE+AQL+SKTQAVIM
Sbjct: 1430 PYQITAKDEILGSILFEAHCRAMRRDPNVRVPFDEALFAECIALNEFAQLTSKTQAVIMA 1489
Query: 2633 NAERSDPDWRYSAVRIFSKTQHKVNEGSLFGSWKACQTLALMHDYVVLVLGPVKKYQRVF 2812
N ERSDPDWRY+AVRIF+K QHKVN GSLFG WKACQTLALMHD V+L+ GPVKKYQ +
Sbjct: 1490 NHERSDPDWRYTAVRIFAKNQHKVNSGSLFGPWKACQTLALMHDAVILLFGPVKKYQLIH 1549
Query: 2813 DSADRPDHIYIHAGNTPFQLSDWCRAHLTPSV---------------------HLANDYT 2929
D DRP+HI+I+AG TP ++S+WC+ LTP +ANDYT
Sbjct: 1550 DERDRPEHIFIYAGRTPQEMSEWCQKFLTPRSASSPVPVMVSGDDSLIGCHPHFVANDYT 1609
Query: 2930 AFDQSQHGEAVVLERKKMERLSIPTHLIDLHVHLKCNVSTQFGPLTCMRLTGEPGTYDDN 3109
AFDQSQHGEA VLER KMER++IP LI LH+ +K +++TQFGPLTCMRLTGEPGTY DN
Sbjct: 1610 AFDQSQHGEAAVLERLKMERVNIPEWLITLHIMIKTHITTQFGPLTCMRLTGEPGTYFDN 1669
Query: 3110 SDYNLAVIHTEYAVGACPVMVSGDDSLLDFEPQTRDEWTAVKPLLALRFKKERNRYATFC 3289
SDYNLAVI EY++ L P W A+KPLLALRFKKE+ RY FC
Sbjct: 1670 SDYNLAVIFLEYSMSG---------QWLSENPL----WPAIKPLLALRFKKEKTRYGNFC 1716
Query: 3290 GYYTGFTGAVRSPLALFAKICIAIDDNSISDKIASYLAEFSIGHSLGDDQWQVLPVELVL 3469
GYY G GAVR P ALFAKI IA++D SI+DK+ASY EF+IGHSLGD W +LPVE V+
Sbjct: 1717 GYYVGAAGAVRMPRALFAKILIAVEDASIADKMASYATEFAIGHSLGDALWSLLPVEEVV 1776
Query: 3470 FQSAIFDFFCRNASREQKIALRLGEVDESILLRLFSGAKWIANATFSLLPSAFRHQILHS 3649
+QSA+FDFFCRNA RE K+ +LG V+ S++ + A W + A + L SA R +L
Sbjct: 1777 YQSAVFDFFCRNAPRELKLLFKLGPVERSVVEAVQEFATWASYAFYRFLNSAQRKVLLTR 1836
Query: 3650 SRQSRSLPEDPEISLLQGQLLKSFQPSEXXXXXXXXXXXXXXXXXXXXXXXXNLSMAHHE 3829
S Q + PE+S LQG+LL+SF + + M+
Sbjct: 1837 SPQLHFPGDAPEVSQLQGELLQSFSMMQ---------PTFPLTGGLLLPRAVDAPMSDDS 1887
Query: 3830 NLG---GGAPPDSRVVAQPPLPLAPKISETPPGPYVDVPFQWQSMSLDGKTNNFSTTDLA 4000
G PD RV QPPLPLAP + ET GP + VPFQW ++ + ++ F T D
Sbjct: 1888 PAGRARSQRDPDHRVDPQPPLPLAPSVQETSGGPAITVPFQWVALVVKSESTIF-TVDPP 1946
Query: 4001 ASTTIKTLTAQYRHAELRSVEAEFCPAAAAFSKPLSISVVWTIASITPATAEETGYYGGR 4180
+ ++ L Y HA L S+EA P AF P+++ +VWT+ ++ PA+ EE Y GG+
Sbjct: 1947 RAKSLTQLIGPYCHARLLSLEAILMPTLNAFQNPVTVHMVWTVNTVQPASGEELFYPGGQ 2006
Query: 4181 FLTVGGPVLLGSTAIVPADLTRLNPIIKTSVAFADTPRLSFTAYSNSGTTGVPLAYVLVR 4360
LTVGGPV + + A VPAD++RLNP+IK +VAF DTPRL+ T + + P+AYV++R
Sbjct: 2007 ALTVGGPVSMSALATVPADVSRLNPVIKGAVAFLDTPRLTGTTMKCAKSETSPMAYVVIR 2066
Query: 4361 GIIRLSGPAGNKL 4399
G + LSGP G +L
Sbjct: 2067 GTLALSGPVGTRL 2079