BLASTX nr result
ID: Magnolia22_contig00013741
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00013741
(2288 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010246760.1 PREDICTED: regulator of nonsense transcripts UPF3... 608 0.0
XP_010246762.1 PREDICTED: regulator of nonsense transcripts UPF3... 604 0.0
XP_010246761.1 PREDICTED: regulator of nonsense transcripts UPF3... 599 0.0
XP_010246764.1 PREDICTED: regulator of nonsense transcripts UPF3... 595 0.0
XP_006858584.1 PREDICTED: regulator of nonsense transcripts UPF3... 586 0.0
XP_011628613.1 PREDICTED: regulator of nonsense transcripts UPF3... 584 0.0
XP_010930556.1 PREDICTED: regulator of nonsense transcripts UPF3... 541 0.0
XP_008802925.1 PREDICTED: regulator of nonsense transcripts UPF3... 533 e-179
XP_008786472.1 PREDICTED: regulator of nonsense transcripts UPF3... 530 e-178
XP_008802922.1 PREDICTED: regulator of nonsense transcripts UPF3... 528 e-177
XP_008802926.1 PREDICTED: regulator of nonsense transcripts UPF3... 525 e-176
XP_008786471.1 PREDICTED: regulator of nonsense transcripts UPF3... 523 e-175
XP_008795263.1 PREDICTED: regulator of nonsense transcripts UPF3... 513 e-171
XP_008795266.1 PREDICTED: regulator of nonsense transcripts UPF3... 513 e-171
XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3... 475 e-157
XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3... 475 e-157
XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3... 474 e-156
XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3... 474 e-156
OAY39705.1 hypothetical protein MANES_10G116400 [Manihot esculenta] 468 e-154
OAY39706.1 hypothetical protein MANES_10G116400 [Manihot esculenta] 465 e-153
>XP_010246760.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Nelumbo
nucifera]
Length = 612
Score = 608 bits (1567), Expect = 0.0
Identities = 348/619 (56%), Positives = 414/619 (66%), Gaps = 27/619 (4%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTKVV+RHLPP + QSAL EQID RFAGRYKW+CFR GKNSQK+Q++SR YIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGH+FV EKG+QFKTIVEYAPSQRV K+WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FLDLI+KP ENLPSAE+QLERREAERAG K+ IVTPLMDFVRQKRAAK GSQR SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G STKR +E+RR TSMYVLRDS+KN GK+KSTY+LV RR++ +
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQA---- 1016
LT+KS++L A+G E EDE VP + +TGK+K L LKGKERE+ A
Sbjct: 241 LTDKSVSLVIASGTETAEDEKVPKTDGAISTATGSADTGKKKVLLLKGKEREIPNAPEVG 300
Query: 1015 -------XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QT 863
F+Q+QRR+ SGRMIRSI ++KEARQ QS++ A+QS+Q QT
Sbjct: 301 VSQQQSVISPIRNSPNSTAFKQSQRRDVSGRMIRSI-LSKEARQGQSTT-AIQSDQQSQT 358
Query: 862 LNLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQ 683
+NLEK+KRPPRP ++RSV KDH+ SI A ND+H NEKQ
Sbjct: 359 MNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQ 418
Query: 682 DRRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS---------- 533
++R RNKDRPDRGVWTP+RR SLEGM+
Sbjct: 419 EKRARNKDRPDRGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAPGAG 478
Query: 532 KLGDDVAEDXXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILS 353
KLGDDV ++ +R+ + H S YD +H E+K +I
Sbjct: 479 KLGDDVLDEPESGNKSFFPSGKARSQEASVHNSRVGRGGNVSSAYD-SCSH-EVKSEIHH 536
Query: 352 ASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG-SLNLSEGKPPKRGGA 182
ASK GE++T GS RS S ENGS HR RRG + H K++DG SL+ S+GKP KRG A
Sbjct: 537 ASK-GEVKTIGSGRSNFSSAENGS-HRQFSRRG-SVHGGKDIDGNSLSTSDGKPSKRGNA 593
Query: 181 TGYGSHEKQVWVQKSGSGS 125
TGYGSHEKQVWVQK GSGS
Sbjct: 594 TGYGSHEKQVWVQKLGSGS 612
>XP_010246762.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Nelumbo
nucifera]
Length = 585
Score = 604 bits (1557), Expect = 0.0
Identities = 345/608 (56%), Positives = 410/608 (67%), Gaps = 16/608 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTKVV+RHLPP + QSAL EQID RFAGRYKW+CFR GKNSQK+Q++SR YIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGH+FV EKG+QFKTIVEYAPSQRV K+WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FLDLI+KP ENLPSAE+QLERREAERAG K+ IVTPLMDFVRQKRAAK GSQR SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G STKR +E+RR TSMYVLRDS+KN GK+KSTY+LV RR++ +
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQAXXXX 1004
LT+KS++L A+G E EDE VP + +TGK+K L LKGKERE+
Sbjct: 241 LTDKSVSLVIASGTETAEDEKVPKTDGAISTATGSADTGKKKVLLLKGKEREIP------ 294
Query: 1003 XXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QTLNLEKDKRPPR 830
+QRR+ SGRMIRSI ++KEARQ QS++ A+QS+Q QT+NLEK+KRPPR
Sbjct: 295 ----------NSQRRDVSGRMIRSI-LSKEARQGQSTT-AIQSDQQSQTMNLEKEKRPPR 342
Query: 829 PNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPD 650
P ++RSV KDH+ SI A ND+H NEKQ++R RNKDRPD
Sbjct: 343 PTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPD 402
Query: 649 RGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----------KLGDDVAEDXX 500
RGVWTP+RR SLEGM+ KLGDDV ++
Sbjct: 403 RGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAPGAGKLGDDVLDEPE 462
Query: 499 XXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTHG 320
+R+ + H S YD +H E+K +I ASK GE++T G
Sbjct: 463 SGNKSFFPSGKARSQEASVHNSRVGRGGNVSSAYD-SCSH-EVKSEIHHASK-GEVKTIG 519
Query: 319 SSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG-SLNLSEGKPPKRGGATGYGSHEKQVW 149
S RS S ENGS HR RRG + H K++DG SL+ S+GKP KRG ATGYGSHEKQVW
Sbjct: 520 SGRSNFSSAENGS-HRQFSRRG-SVHGGKDIDGNSLSTSDGKPSKRGNATGYGSHEKQVW 577
Query: 148 VQKSGSGS 125
VQK GSGS
Sbjct: 578 VQKLGSGS 585
>XP_010246761.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Nelumbo
nucifera]
Length = 602
Score = 599 bits (1544), Expect = 0.0
Identities = 346/619 (55%), Positives = 412/619 (66%), Gaps = 27/619 (4%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTKVV+RHLPP + QSAL EQID RFAGRYKW+CFR GKNSQK+Q++SR YIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGH+FV EKG+QFKTIVEYAPSQRV K+WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FLDLI+KP ENLPSAE+QLERREAERAG K+ IVTPLMDFVRQKRAAK GSQR SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G STKR +E+RR TSMYVLRDS+KN GK+KSTY+LV RR++ +
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQA---- 1016
LT+KS++L A+G E EDE + +TGK+K L LKGKERE+ A
Sbjct: 241 LTDKSVSLVIASGTETAEDEKA----------TGSADTGKKKVLLLKGKEREIPNAPEVG 290
Query: 1015 -------XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QT 863
F+Q+QRR+ SGRMIRSI ++KEARQ QS++ A+QS+Q QT
Sbjct: 291 VSQQQSVISPIRNSPNSTAFKQSQRRDVSGRMIRSI-LSKEARQGQSTT-AIQSDQQSQT 348
Query: 862 LNLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQ 683
+NLEK+KRPPRP ++RSV KDH+ SI A ND+H NEKQ
Sbjct: 349 MNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQ 408
Query: 682 DRRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS---------- 533
++R RNKDRPDRGVWTP+RR SLEGM+
Sbjct: 409 EKRARNKDRPDRGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAPGAG 468
Query: 532 KLGDDVAEDXXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILS 353
KLGDDV ++ +R+ + H S YD +H E+K +I
Sbjct: 469 KLGDDVLDEPESGNKSFFPSGKARSQEASVHNSRVGRGGNVSSAYD-SCSH-EVKSEIHH 526
Query: 352 ASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG-SLNLSEGKPPKRGGA 182
ASK GE++T GS RS S ENGS HR RRG + H K++DG SL+ S+GKP KRG A
Sbjct: 527 ASK-GEVKTIGSGRSNFSSAENGS-HRQFSRRG-SVHGGKDIDGNSLSTSDGKPSKRGNA 583
Query: 181 TGYGSHEKQVWVQKSGSGS 125
TGYGSHEKQVWVQK GSGS
Sbjct: 584 TGYGSHEKQVWVQKLGSGS 602
>XP_010246764.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X5 [Nelumbo
nucifera]
Length = 575
Score = 595 bits (1534), Expect = 0.0
Identities = 343/608 (56%), Positives = 408/608 (67%), Gaps = 16/608 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTKVV+RHLPP + QSAL EQID RFAGRYKW+CFR GKNSQK+Q++SR YIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGH+FV EKG+QFKTIVEYAPSQRV K+WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FLDLI+KP ENLPSAE+QLERREAERAG K+ IVTPLMDFVRQKRAAK GSQR SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G STKR +E+RR TSMYVLRDS+KN GK+KSTY+LV RR++ +
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQAXXXX 1004
LT+KS++L A+G E EDE + +TGK+K L LKGKERE+
Sbjct: 241 LTDKSVSLVIASGTETAEDEKA----------TGSADTGKKKVLLLKGKEREIP------ 284
Query: 1003 XXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QTLNLEKDKRPPR 830
+QRR+ SGRMIRSI ++KEARQ QS++ A+QS+Q QT+NLEK+KRPPR
Sbjct: 285 ----------NSQRRDVSGRMIRSI-LSKEARQGQSTT-AIQSDQQSQTMNLEKEKRPPR 332
Query: 829 PNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPD 650
P ++RSV KDH+ SI A ND+H NEKQ++R RNKDRPD
Sbjct: 333 PTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPD 392
Query: 649 RGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----------KLGDDVAEDXX 500
RGVWTP+RR SLEGM+ KLGDDV ++
Sbjct: 393 RGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAPGAGKLGDDVLDEPE 452
Query: 499 XXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTHG 320
+R+ + H S YD +H E+K +I ASK GE++T G
Sbjct: 453 SGNKSFFPSGKARSQEASVHNSRVGRGGNVSSAYD-SCSH-EVKSEIHHASK-GEVKTIG 509
Query: 319 SSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG-SLNLSEGKPPKRGGATGYGSHEKQVW 149
S RS S ENGS HR RRG + H K++DG SL+ S+GKP KRG ATGYGSHEKQVW
Sbjct: 510 SGRSNFSSAENGS-HRQFSRRG-SVHGGKDIDGNSLSTSDGKPSKRGNATGYGSHEKQVW 567
Query: 148 VQKSGSGS 125
VQK GSGS
Sbjct: 568 VQKLGSGS 575
>XP_006858584.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
[Amborella trichopoda] ERN20051.1 hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 586 bits (1511), Expect = 0.0
Identities = 330/606 (54%), Positives = 394/606 (65%), Gaps = 14/606 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDP DRTKVVVR LPPA+ Q ALME+IDSRF+GRY+W FRPGKNS KNQ+HSR+YIDF
Sbjct: 1 MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFF GHVFV EKG+QFK +VEYAPSQRVPK WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+ +AKPAENLPSAEIQLERREAERAG K++LIVTPLMDFVRQKRAAKSG+ R S+NG
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K +R++ GV S KR ERR+ TSMYVLRDS K K+KSTY LV RRDE +
Sbjct: 181 KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQA---- 1016
L + S A++A G E L+DE+V T+E+GK+K L LKGK+RE SQA
Sbjct: 241 LPDNSSAVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGSV 300
Query: 1015 ------XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ-QTLN 857
FRQ+QRR+G+ RM++SI NK+ RQ + L +Q Q L+
Sbjct: 301 VQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQLQGLS 360
Query: 856 LEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDR 677
LEKDKRPPRPNS R SKDH+ P +S GND + VP NEKQ++
Sbjct: 361 LEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQEK 420
Query: 676 RMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMSKLGDDVAEDXXX 497
R RNKDRPDR VWTP+RR L KLGDD E
Sbjct: 421 RTRNKDRPDRAVWTPLRRSDGIHTVDESQMTSDSLEKLSNAQEL----KLGDDTEECDGL 476
Query: 496 XXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTHGS 317
SR D+G+H S+ + LN G+ K D SAS+S E++T G+
Sbjct: 477 GSNASSSMGKSRTSDLGYHNSRSGRGASSSSS-EHSLNQGDTKFDTSSASRSLEMKTQGT 535
Query: 316 SRSS--PIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVWVQ 143
RSS +ENGS HR GRR ++ LK+ DGS+NL +GKP KRGG YG+HEKQ+WVQ
Sbjct: 536 GRSSTVSVENGS-HRHAGRRS-SSTGLKDADGSMNLPDGKPVKRGGIPSYGAHEKQIWVQ 593
Query: 142 KSGSGS 125
KSG+G+
Sbjct: 594 KSGTGT 599
>XP_011628613.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
[Amborella trichopoda]
Length = 600
Score = 584 bits (1506), Expect = 0.0
Identities = 331/607 (54%), Positives = 395/607 (65%), Gaps = 15/607 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDP DRTKVVVR LPPA+ Q ALME+IDSRF+GRY+W FRPGKNS KNQ+HSR+YIDF
Sbjct: 1 MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFF GHVFV EKG+QFK +VEYAPSQRVPK WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGS-QRPSSN 1364
FL+ +AKPAENLPSAEIQLERREAERAG K++LIVTPLMDFVRQKRAAKSG+ QR S+N
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLQRSSAN 180
Query: 1363 GKITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEH 1184
GK +R++ GV S KR ERR+ TSMYVLRDS K K+KSTY LV RRDE
Sbjct: 181 GKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQ 240
Query: 1183 QLTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQA--- 1016
+L + S A++A G E L+DE+V T+E+GK+K L LKGK+RE SQA
Sbjct: 241 KLPDNSSAVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGS 300
Query: 1015 -------XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ-QTL 860
FRQ+QRR+G+ RM++SI NK+ RQ + L +Q Q L
Sbjct: 301 VVQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQLQGL 360
Query: 859 NLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQD 680
+LEKDKRPPRPNS R SKDH+ P +S GND + VP NEKQ+
Sbjct: 361 SLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQE 420
Query: 679 RRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMSKLGDDVAEDXX 500
+R RNKDRPDR VWTP+RR L KLGDD E
Sbjct: 421 KRTRNKDRPDRAVWTPLRRSDGIHTVDESQMTSDSLEKLSNAQEL----KLGDDTEECDG 476
Query: 499 XXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTHG 320
SR D+G+H S+ + LN G+ K D SAS+S E++T G
Sbjct: 477 LGSNASSSMGKSRTSDLGYHNSRSGRGASSSSS-EHSLNQGDTKFDTSSASRSLEMKTQG 535
Query: 319 SSRSS--PIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVWV 146
+ RSS +ENGS HR GRR ++ LK+ DGS+NL +GKP KRGG YG+HEKQ+WV
Sbjct: 536 TGRSSTVSVENGS-HRHAGRRS-SSTGLKDADGSMNLPDGKPVKRGGIPSYGAHEKQIWV 593
Query: 145 QKSGSGS 125
QKSG+G+
Sbjct: 594 QKSGTGT 600
>XP_010930556.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Elaeis
guineensis]
Length = 575
Score = 541 bits (1393), Expect = 0.0
Identities = 323/610 (52%), Positives = 388/610 (63%), Gaps = 18/610 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTKVV+RHLPP+I QSALMEQID RFAGRY W CFRPGK S KNQ++SR Y++F
Sbjct: 1 MKDPFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDVVEFAE FDGH+FV EKG QFK +VEYAPSQRVP+AWSKKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPRAWSKKDGREGTISKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+L++KP E+LPSAEIQLER+EAERAG PK+T IVTPLMDFVRQKRAAKSG QR NG
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGNG 179
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++++AGGV +KR +++RR TSMYVLRDS KN G K+KSTY+L SRR++ Q
Sbjct: 180 KLSKRAGGV---------SKRGSDKRRSSTSMYVLRDSTKNGGAKDKSTYILGSRREDQQ 230
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLP-LKGKEREVSQA---- 1016
L +K IA+A+A+GAE LEDE V +E GK K+ LKGK +E S A
Sbjct: 231 LPDKPIAVASASGAEALEDEFV---SGSSGSNAGPVEAGKSKIVLLKGKGKEGSHASGGL 287
Query: 1015 -----XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQS--SSLAVQSEQQTLN 857
+Q++R E GR+IRSI ++KEARQ QS +S + + QT N
Sbjct: 288 VHQQNVTSPVRSSPTLTSKQSRRLESGGRIIRSI-LSKEARQTQSYIASSLPEQQMQTAN 346
Query: 856 LEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDR 677
+EKDKRPPRP S RS+S+DH+ S P +S H V ++K DR
Sbjct: 347 MEKDKRPPRPPSTRSISRDHVSSGSPLPSVSDGDDKRYIDDKVGVGYKHGSVSISDKHDR 406
Query: 676 RMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----KLGDDVAE 509
R RNKDRPDRGVW P+RR SLE +S G VA+
Sbjct: 407 RTRNKDRPDRGVWAPLRR-SDRSQSNDGTHSLSSEPALILADSLEDISISQQAAGIKVAD 465
Query: 508 DXXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIR 329
D S D G PL GE K D SAS++ E++
Sbjct: 466 DGVVVQNALIGGGSSSLADRG-----------------MPLGQGERKSDSPSASRTEEMK 508
Query: 328 THGSSR--SSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQ 155
+HG R S +ENGS HR GRRGPA S KE + S ++SEGK KR G++GYGSHE+Q
Sbjct: 509 SHGGGRVSLSTVENGS-HRHAGRRGPARGS-KEAESSSSISEGKHSKR-GSSGYGSHERQ 565
Query: 154 VWVQKSGSGS 125
VWVQKSGS S
Sbjct: 566 VWVQKSGSAS 575
>XP_008802925.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 568
Score = 533 bits (1373), Expect = e-179
Identities = 309/607 (50%), Positives = 375/607 (61%), Gaps = 11/607 (1%)
Frame = -2
Query: 1912 EFLLMKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRV 1733
E MKDP DRTKVV+R LPPAI Q+ LME+ID RFAGRYKW CFRPGKNSQKN HSR
Sbjct: 6 EIAHMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSQKNPHHSRA 65
Query: 1732 YIDFKRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDP 1553
YIDFKR EDVVEFAEFFDGHVFV +KG+QFK VEYAPSQR+PK WSKKD REGTI KDP
Sbjct: 66 YIDFKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIKDP 125
Query: 1552 EYLEFLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRP 1373
EYLEFL+ +AKPAE LPSAEIQLERREAERAGG KD +IVTPLM+FVRQKR AKSGSQR
Sbjct: 126 EYLEFLEHLAKPAEYLPSAEIQLERREAERAGGQKDMVIVTPLMEFVRQKRVAKSGSQR- 184
Query: 1372 SSNGKITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRR 1193
SNGK++R++GG S++R++E+RR T M+VLRDS N+ GK+K TY+LVSR+
Sbjct: 185 YSNGKLSRRSGGA-SSSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVSRK 243
Query: 1192 DEHQLTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVS-- 1022
D+ QL +KSI +A+A+ ++LE+E +E GK++ L LK KERE +
Sbjct: 244 DDQQLLDKSIGVASASSIKVLEEE-------------KGVEAGKKRILLLKAKEREDTHV 290
Query: 1021 ------QAXXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQ-- 866
Q F+QNQR E GR+I SI NK++ QS A QSEQQ
Sbjct: 291 SGGSSRQQNVSSVKKSGSYAFKQNQRHEARGRIIGSILSNKDS--CQSYVTASQSEQQTP 348
Query: 865 TLNLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEK 686
T+NL+KDK PPRP ++ S+ K+HI S P A + GN+L+ V T+EK
Sbjct: 349 TVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVSTSEK 408
Query: 685 QDRRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMSKLGDDVAED 506
DR RNKDRPDR VW P+R L VA
Sbjct: 409 HDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQVAR- 467
Query: 505 XXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRT 326
N G+ D P + GE+K + +A+++ E++T
Sbjct: 468 VKAGDDDVACLGCLNNSSAGY---------------DIPTSLGEIKAHVSNANQTAEVKT 512
Query: 325 HGSSRSSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVWV 146
G S HR++GRRGP H +KEVD SLN EGKP KRGG GYGSHE+QVWV
Sbjct: 513 LGGS----------HRYIGRRGP-VHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQVWV 561
Query: 145 QKSGSGS 125
QKSGSG+
Sbjct: 562 QKSGSGT 568
>XP_008786472.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 574
Score = 530 bits (1366), Expect = e-178
Identities = 316/609 (51%), Positives = 387/609 (63%), Gaps = 17/609 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKD FDRTKVV+RHLPP+I QSALMEQID RFAGRY W CFRPGK S KNQ++SR Y++F
Sbjct: 1 MKDSFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDVVEFAE FDGH+FV EKG QFK +VEYAPSQRVPK W KKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+L++KP E+LPSAEIQLER+EAERAG PK+T IVTPLMDFVRQKRAAKSG QR NG
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGNG 179
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++++AGGV +KR +++RR TSMYVLRD+ KN G K+K TY+LVSRR++ Q
Sbjct: 180 KLSKRAGGV---------SKRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRREDQQ 230
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLP-LKGKEREVSQAXXXX 1004
L +K I++A+++G E LEDE V +E GK K+ LKGK RE S A
Sbjct: 231 LPDKPISVASSSGTEALEDEFV---SGSSGSTSFPVEAGKSKIMLLKGKGREGSHASGGL 287
Query: 1003 XXXXXXXGFR--------QNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QTLNL 854
R Q++R E SGR+IR I ++KEARQ QS +++ Q EQ QT N+
Sbjct: 288 VQQQNLTSLRSSPTSTSKQSRRLESSGRIIRGI-LSKEARQTQSYTVSSQPEQQMQTANV 346
Query: 853 EKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRR 674
EKDKRPPRP S RS+ +DH+ S P +S H V ++K DRR
Sbjct: 347 EKDKRPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKHDRR 406
Query: 673 MRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----KLGDDVAED 506
RNKDRPDRGVW P+RR SLE +S G +A+D
Sbjct: 407 TRNKDRPDRGVWAPLRR-SDRSQSNDGTHSSSPEPALILADSLEDVSISQQAAGIRLADD 465
Query: 505 XXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRT 326
+N VG + + L GE K D LSAS++ E+++
Sbjct: 466 ----------GVVVQNAHVG-------RGSSSLADHGMQLGQGERKSDSLSASRTEEMKS 508
Query: 325 HGSSRSS--PIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQV 152
HG R S +ENGS HR GRRGP S K+ + S ++SEGK KR G++G+GSHE+QV
Sbjct: 509 HGGGRVSLFVVENGS-HRHAGRRGPVRGS-KDAESSSSISEGKHSKR-GSSGFGSHERQV 565
Query: 151 WVQKSGSGS 125
WVQKSGS S
Sbjct: 566 WVQKSGSAS 574
>XP_008802922.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera] XP_008802923.1 PREDICTED: regulator
of nonsense transcripts UPF3-like isoform X1 [Phoenix
dactylifera] XP_008802924.1 PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X1 [Phoenix
dactylifera]
Length = 570
Score = 528 bits (1360), Expect = e-177
Identities = 309/609 (50%), Positives = 375/609 (61%), Gaps = 13/609 (2%)
Frame = -2
Query: 1912 EFLLMKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNS--QKNQQHS 1739
E MKDP DRTKVV+R LPPAI Q+ LME+ID RFAGRYKW CFRPGKNS QKN HS
Sbjct: 6 EIAHMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSCSQKNPHHS 65
Query: 1738 RVYIDFKRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFK 1559
R YIDFKR EDVVEFAEFFDGHVFV +KG+QFK VEYAPSQR+PK WSKKD REGTI K
Sbjct: 66 RAYIDFKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIK 125
Query: 1558 DPEYLEFLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQ 1379
DPEYLEFL+ +AKPAE LPSAEIQLERREAERAGG KD +IVTPLM+FVRQKR AKSGSQ
Sbjct: 126 DPEYLEFLEHLAKPAEYLPSAEIQLERREAERAGGQKDMVIVTPLMEFVRQKRVAKSGSQ 185
Query: 1378 RPSSNGKITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVS 1199
R SNGK++R++GG S++R++E+RR T M+VLRDS N+ GK+K TY+LVS
Sbjct: 186 R-YSNGKLSRRSGGA-SSSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVS 243
Query: 1198 RRDEHQLTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVS 1022
R+D+ QL +KSI +A+A+ ++LE+E +E GK++ L LK KERE +
Sbjct: 244 RKDDQQLLDKSIGVASASSIKVLEEE-------------KGVEAGKKRILLLKAKEREDT 290
Query: 1021 --------QAXXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQ 866
Q F+QNQR E GR+I SI NK++ QS A QSEQQ
Sbjct: 291 HVSGGSSRQQNVSSVKKSGSYAFKQNQRHEARGRIIGSILSNKDS--CQSYVTASQSEQQ 348
Query: 865 --TLNLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTN 692
T+NL+KDK PPRP ++ S+ K+HI S P A + GN+L+ V T+
Sbjct: 349 TPTVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVSTS 408
Query: 691 EKQDRRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMSKLGDDVA 512
EK DR RNKDRPDR VW P+R L VA
Sbjct: 409 EKHDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQVA 468
Query: 511 EDXXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEI 332
N G+ D P + GE+K + +A+++ E+
Sbjct: 469 R-VKAGDDDVACLGCLNNSSAGY---------------DIPTSLGEIKAHVSNANQTAEV 512
Query: 331 RTHGSSRSSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQV 152
+T G S HR++GRRGP H +KEVD SLN EGKP KRGG GYGSHE+QV
Sbjct: 513 KTLGGS----------HRYIGRRGP-VHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQV 561
Query: 151 WVQKSGSGS 125
WVQKSGSG+
Sbjct: 562 WVQKSGSGT 570
>XP_008802926.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
[Phoenix dactylifera]
Length = 567
Score = 525 bits (1352), Expect = e-176
Identities = 308/608 (50%), Positives = 371/608 (61%), Gaps = 12/608 (1%)
Frame = -2
Query: 1912 EFLLMKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNS--QKNQQHS 1739
E MKDP DRTKVV+R LPPAI Q+ LME+ID RFAGRYKW CFRPGKNS QKN HS
Sbjct: 6 EIAHMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSCSQKNPHHS 65
Query: 1738 RVYIDFKRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFK 1559
R YIDFKR EDVVEFAEFFDGHVFV +KG+QFK VEYAPSQR+PK WSKKD REGTI K
Sbjct: 66 RAYIDFKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIK 125
Query: 1558 DPEYLEFLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQ 1379
DPEYLEFL+ +AKPAE LPSAEIQLERREAERAGG KD +IVTPLM+FVRQKR AKSGSQ
Sbjct: 126 DPEYLEFLEHLAKPAEYLPSAEIQLERREAERAGGQKDMVIVTPLMEFVRQKRVAKSGSQ 185
Query: 1378 RPSSNGKITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVS 1199
R SNGK++R++GG S++R++E+RR T M+VLRDS N+ GK+K TY+LVS
Sbjct: 186 R-YSNGKLSRRSGGA-SSSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVS 243
Query: 1198 RRDEHQLTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLPLKGKEREVS- 1022
R+D+ QL +KSI +A+A+ ++LE+E KR L LK KERE +
Sbjct: 244 RKDDQQLLDKSIGVASASSIKVLEEEKAGK---------------KRILLLKAKEREDTH 288
Query: 1021 -------QAXXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQ- 866
Q F+QNQR E GR+I SI NK++ QS A QSEQQ
Sbjct: 289 VSGGSSRQQNVSSVKKSGSYAFKQNQRHEARGRIIGSILSNKDS--CQSYVTASQSEQQT 346
Query: 865 -TLNLEKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNE 689
T+NL+KDK PPRP ++ S+ K+HI S P A + GN+L+ V T+E
Sbjct: 347 PTVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVSTSE 406
Query: 688 KQDRRMRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMSKLGDDVAE 509
K DR RNKDRPDR VW P+R L VA
Sbjct: 407 KHDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQVAR 466
Query: 508 DXXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIR 329
N G+ D P + GE+K + +A+++ E++
Sbjct: 467 -VKAGDDDVACLGCLNNSSAGY---------------DIPTSLGEIKAHVSNANQTAEVK 510
Query: 328 THGSSRSSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVW 149
T G S HR++GRRGP H +KEVD SLN EGKP KRGG GYGSHE+QVW
Sbjct: 511 TLGGS----------HRYIGRRGP-VHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQVW 559
Query: 148 VQKSGSGS 125
VQKSGSG+
Sbjct: 560 VQKSGSGT 567
>XP_008786471.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera]
Length = 581
Score = 523 bits (1348), Expect = e-175
Identities = 316/616 (51%), Positives = 387/616 (62%), Gaps = 24/616 (3%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKD FDRTKVV+RHLPP+I QSALMEQID RFAGRY W CFRPGK S KNQ++SR Y++F
Sbjct: 1 MKDSFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDVVEFAE FDGH+FV EKG QFK +VEYAPSQRVPK W KKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+L++KP E+LPSAEIQLER+EAERAG PK+T IVTPLMDFVRQKRAAKSG QR NG
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGNG 179
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++++AGGV +KR +++RR TSMYVLRD+ KN G K+K TY+LVSRR++ Q
Sbjct: 180 KLSKRAGGV---------SKRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRREDQQ 230
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLP-LKGKEREVSQAXXXX 1004
L +K I++A+++G E LEDE V +E GK K+ LKGK RE S A
Sbjct: 231 LPDKPISVASSSGTEALEDEFV---SGSSGSTSFPVEAGKSKIMLLKGKGREGSHASGGL 287
Query: 1003 XXXXXXXGFR--------QNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQ--QTLNL 854
R Q++R E SGR+IR I ++KEARQ QS +++ Q EQ QT N+
Sbjct: 288 VQQQNLTSLRSSPTSTSKQSRRLESSGRIIRGI-LSKEARQTQSYTVSSQPEQQMQTANV 346
Query: 853 EKDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRR 674
EKDKRPPRP S RS+ +DH+ S P +S H V ++K DRR
Sbjct: 347 EKDKRPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKHDRR 406
Query: 673 MRNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----KLGDDVAED 506
RNKDRPDRGVW P+RR SLE +S G +A+D
Sbjct: 407 TRNKDRPDRGVWAPLRR-SDRSQSNDGTHSSSPEPALILADSLEDVSISQQAAGIRLADD 465
Query: 505 XXXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRT 326
+N VG + + L GE K D LSAS++ E+++
Sbjct: 466 ----------GVVVQNAHVG-------RGSSSLADHGMQLGQGERKSDSLSASRTEEMKS 508
Query: 325 HGSSRSS--PIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHE--- 161
HG R S +ENGS HR GRRGP S K+ + S ++SEGK KR G++G+GSHE
Sbjct: 509 HGGGRVSLFVVENGS-HRHAGRRGPVRGS-KDAESSSSISEGKHSKR-GSSGFGSHEVSQ 565
Query: 160 ----KQVWVQKSGSGS 125
+QVWVQKSGS S
Sbjct: 566 DYDIRQVWVQKSGSAS 581
>XP_008795263.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera] XP_008795264.1 PREDICTED: regulator
of nonsense transcripts UPF3-like isoform X1 [Phoenix
dactylifera]
Length = 565
Score = 513 bits (1321), Expect = e-171
Identities = 309/608 (50%), Positives = 382/608 (62%), Gaps = 16/608 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTK+V+RHLPP+I QSAL+EQID RF+GRY WLCFRPGK S KNQ++SR Y++F
Sbjct: 1 MKDPFDRTKIVLRHLPPSISQSALIEQIDERFSGRYDWLCFRPGKASHKNQRYSRAYLNF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR E VVEFAEFFDGH+FV EKG QFK +VEYAPSQ VPK SKKDGREGTI KDPEYLE
Sbjct: 61 KRPEVVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+ ++KP E+LPSAEIQLER+EAERAG K+T IVTPLM+FVRQK AAK+G+QR + G
Sbjct: 121 FLEHLSKP-EHLPSAEIQLERKEAERAGAQKETPIVTPLMNFVRQKLAAKNGAQRLAGYG 179
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++++A GV KR +E+RR TSMYVLRDS KN K+K+TY+L+ RR+E Q
Sbjct: 180 KLSKRAIGV---------IKRGSEKRRLSTSMYVLRDSRKNGSAKDKATYILMPRREEQQ 230
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLP-LKGKEREVSQA---- 1016
L +KSIA+A+A+GAE LEDE +E GK K+ LKGKERE S A
Sbjct: 231 LPDKSIAVASASGAEALEDEFDFPVTVSNGLTSRAVEAGKSKIVLLKGKEREGSHASGGL 290
Query: 1015 -----XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLE 851
+QNQR E SGR+IR+I ++ E RQ +S + T NLE
Sbjct: 291 VQQQNVTTTVRSSPTSTSKQNQRLEASGRIIRTI-LSNEGRQSYMASSQPEQHMHTTNLE 349
Query: 850 KDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRM 671
KDKRP RP S RS+SKD + S PA +S + H V ++K ++R
Sbjct: 350 KDKRPARPPSARSISKDRVSSSSSPASISDNGDKRYIDDMVAMSYKHGSVSISDKHEKRT 409
Query: 670 RNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----KLGDDVAEDX 503
RNKDRPDRGVW P+RR SLE +S G VA+D
Sbjct: 410 RNKDRPDRGVWAPLRR-SDRSQSNDGTLSSSSEAAQILVDSLENVSMSQQTAGIKVADD- 467
Query: 502 XXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTH 323
NV V + +D P+ GE K D SAS++ E+++H
Sbjct: 468 --------------NVVV-------------WNAHDMPIGQGERKSDTPSASRTEEMKSH 500
Query: 322 GSSR--SSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVW 149
G +R S +ENGS HR VGRRGPA S K+ + SL++SE K KR G++GYGSHE+QVW
Sbjct: 501 GGARVGLSIVENGS-HRHVGRRGPARAS-KDAESSLSISEVKHSKR-GSSGYGSHERQVW 557
Query: 148 VQKSGSGS 125
VQKSGS S
Sbjct: 558 VQKSGSAS 565
>XP_008795266.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 562
Score = 513 bits (1320), Expect = e-171
Identities = 310/608 (50%), Positives = 383/608 (62%), Gaps = 16/608 (2%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MKDPFDRTK+V+RHLPP+I QSAL+EQID RF+GRY WLCFRPGK S KNQ++SR Y++F
Sbjct: 1 MKDPFDRTKIVLRHLPPSISQSALIEQIDERFSGRYDWLCFRPGKASHKNQRYSRAYLNF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR E VVEFAEFFDGH+FV EKG QFK +VEYAPSQ VPK SKKDGREGTI KDPEYLE
Sbjct: 61 KRPEVVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL+ ++KP E+LPSAEIQLER+EAERAG K+T IVTPLM+FVRQK AAK+G+QR + G
Sbjct: 121 FLEHLSKP-EHLPSAEIQLERKEAERAGAQKETPIVTPLMNFVRQKLAAKNGAQRLAGYG 179
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++++A GV KR +E+RR TSMYVLRDS KN K+K+TY+L+ RR+E Q
Sbjct: 180 KLSKRAIGV---------IKRGSEKRRLSTSMYVLRDSRKNGSAKDKATYILMPRREEQQ 230
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRKLP-LKGKEREVSQA---- 1016
L +KSIA+A+A+GAE LEDE V +E GK K+ LKGKERE S A
Sbjct: 231 LPDKSIAVASASGAEALEDEFV---TVSNGLTSRAVEAGKSKIVLLKGKEREGSHASGGL 287
Query: 1015 -----XXXXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLE 851
+QNQR E SGR+IR+I ++ E RQ +S + T NLE
Sbjct: 288 VQQQNVTTTVRSSPTSTSKQNQRLEASGRIIRTI-LSNEGRQSYMASSQPEQHMHTTNLE 346
Query: 850 KDKRPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRM 671
KDKRP RP S RS+SKD + S PA +S + H V ++K ++R
Sbjct: 347 KDKRPARPPSARSISKDRVSSSSSPASISDNGDKRYIDDMVAMSYKHGSVSISDKHEKRT 406
Query: 670 RNKDRPDRGVWTPMRRXXXXXXXXXXXXXXXXXXXXXXXXSLEGMS----KLGDDVAEDX 503
RNKDRPDRGVW P+RR SLE +S G VA+D
Sbjct: 407 RNKDRPDRGVWAPLRR-SDRSQSNDGTLSSSSEAAQILVDSLENVSMSQQTAGIKVADD- 464
Query: 502 XXXXXXXXXXXXSRNVDVGFHXXXXXXXXXXXSTYDFPLNHGEMKVDILSASKSGEIRTH 323
NV V + +D P+ GE K D SAS++ E+++H
Sbjct: 465 --------------NVVV-------------WNAHDMPIGQGERKSDTPSASRTEEMKSH 497
Query: 322 GSSR--SSPIENGSNHRFVGRRGPAAHSLKEVDGSLNLSEGKPPKRGGATGYGSHEKQVW 149
G +R S +ENGS HR VGRRGPA S K+ + SL++SE K KR G++GYGSHE+QVW
Sbjct: 498 GGARVGLSIVENGS-HRHVGRRGPARAS-KDAESSLSISEVKHSKR-GSSGYGSHERQVW 554
Query: 148 VQKSGSGS 125
VQKSGS S
Sbjct: 555 VQKSGSAS 562
>XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
vinifera]
Length = 528
Score = 475 bits (1223), Expect = e-157
Identities = 256/428 (59%), Positives = 307/428 (71%), Gaps = 2/428 (0%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK P DRTKVVVRHLPP I ++A +EQID+ F GRY + FRPGKNSQK Q +SR Y+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGHVFV EKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
F++L+AKP ENLPSAEIQLERREAERAG KDT IVTPLMDFVRQKRAAK S+R SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G S+KR +E+RR T+MYVLRD+ K+ K+KST++LV +RD+
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVS-QAXXX 1007
L++KS+ LAA GAE LE+E+ ++ GK+K L LKGKERE+S
Sbjct: 241 LSDKSVNLAAGGGAEALEEES---------GVSGAVDAGKKKVLLLKGKEREISHNVTSP 291
Query: 1006 XXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDKRPPRP 827
+QNQRREGSGR+IRSI +NK+ARQ QSS + + Q NLEK+KRPPRP
Sbjct: 292 VKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRP 351
Query: 826 NSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPDR 647
I+ SK+ G+ VGND+HSFV +EKQD+R RNKDRPDR
Sbjct: 352 PHIQLASKETNGA---------------QDDKVVGNDVHSFV--SEKQDKRTRNKDRPDR 394
Query: 646 GVWTPMRR 623
GVWTP+RR
Sbjct: 395 GVWTPLRR 402
Score = 77.0 bits (188), Expect = 5e-11
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = -2
Query: 397 DFPL-NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG 227
DFP +HGEM+ D +S ++SGE++ GS R S ++NGS H+ GRRGP HS+K+ DG
Sbjct: 424 DFPEGSHGEMRSD-MSNARSGEVKALGSGRGGHSALDNGS-HKHSGRRGPT-HSVKDADG 480
Query: 226 SLNLSEGKPPKRGGATGYGSHE 161
S +SEGK KRG A GYGSHE
Sbjct: 481 SSIVSEGKHSKRGSAPGYGSHE 502
>XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
vinifera]
Length = 529
Score = 475 bits (1222), Expect = e-157
Identities = 256/429 (59%), Positives = 307/429 (71%), Gaps = 3/429 (0%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK P DRTKVVVRHLPP I ++A +EQID+ F GRY + FRPGKNSQK Q +SR Y+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGHVFV EKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
F++L+AKP ENLPSAEIQLERREAERAG KDT IVTPLMDFVRQKRAAK S+R SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G S+KR +E+RR T+MYVLRD+ K+ K+KST++LV +RD+
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVS--QAXX 1010
L++KS+ LAA GAE LE+E+ ++ GK+K L LKGKERE+S
Sbjct: 241 LSDKSVNLAAGGGAEALEEES---------GVSGAVDAGKKKVLLLKGKEREISHQNVTS 291
Query: 1009 XXXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDKRPPR 830
+QNQRREGSGR+IRSI +NK+ARQ QSS + + Q NLEK+KRPPR
Sbjct: 292 PVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPR 351
Query: 829 PNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPD 650
P I+ SK+ G+ VGND+HSFV +EKQD+R RNKDRPD
Sbjct: 352 PPHIQLASKETNGA---------------QDDKVVGNDVHSFV--SEKQDKRTRNKDRPD 394
Query: 649 RGVWTPMRR 623
RGVWTP+RR
Sbjct: 395 RGVWTPLRR 403
Score = 77.0 bits (188), Expect = 5e-11
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = -2
Query: 397 DFPL-NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG 227
DFP +HGEM+ D +S ++SGE++ GS R S ++NGS H+ GRRGP HS+K+ DG
Sbjct: 425 DFPEGSHGEMRSD-MSNARSGEVKALGSGRGGHSALDNGS-HKHSGRRGPT-HSVKDADG 481
Query: 226 SLNLSEGKPPKRGGATGYGSHE 161
S +SEGK KRG A GYGSHE
Sbjct: 482 SSIVSEGKHSKRGSAPGYGSHE 503
>XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
vinifera] CBI29694.3 unnamed protein product, partial
[Vitis vinifera]
Length = 519
Score = 474 bits (1220), Expect = e-156
Identities = 256/433 (59%), Positives = 307/433 (70%), Gaps = 7/433 (1%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK P DRTKVVVRHLPP I ++A +EQID+ F GRY + FRPGKNSQK Q +SR Y+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGHVFV EKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
F++L+AKP ENLPSAEIQLERREAERAG KDT IVTPLMDFVRQKRAAK S+R SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G S+KR +E+RR T+MYVLRD+ K+ K+KST++LV +RD+
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQAXXXX 1004
L++KS+ LAA GAE LE+E+ ++ GK+K L LKGKERE+S
Sbjct: 241 LSDKSVNLAAGGGAEALEEES---------GVSGAVDAGKKKVLLLKGKEREISHHLLQQ 291
Query: 1003 XXXXXXXGF------RQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDK 842
+QNQRREGSGR+IRSI +NK+ARQ QSS + + Q NLEK+K
Sbjct: 292 NVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEK 351
Query: 841 RPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNK 662
RPPRP I+ SK+ G+ VGND+HSFV +EKQD+R RNK
Sbjct: 352 RPPRPPHIQLASKETNGA---------------QDDKVVGNDVHSFV--SEKQDKRTRNK 394
Query: 661 DRPDRGVWTPMRR 623
DRPDRGVWTP+RR
Sbjct: 395 DRPDRGVWTPLRR 407
Score = 97.4 bits (241), Expect = 2e-17
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Frame = -2
Query: 397 DFPL-NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG 227
DFP +HGEM+ D +S ++SGE++ GS R S ++NGS H+ GRRGP HS+K+ DG
Sbjct: 429 DFPEGSHGEMRSD-MSNARSGEVKALGSGRGGHSALDNGS-HKHSGRRGPT-HSVKDADG 485
Query: 226 SLNLSEGKPPKRGGATGYGSHEKQVWVQKSGSG 128
S +SEGK KRG A GYGSHEKQVWVQKS SG
Sbjct: 486 SSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 518
>XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera] XP_019079127.1 PREDICTED: regulator of nonsense
transcripts UPF3 isoform X1 [Vitis vinifera]
Length = 533
Score = 474 bits (1220), Expect = e-156
Identities = 256/433 (59%), Positives = 307/433 (70%), Gaps = 7/433 (1%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK P DRTKVVVRHLPP I ++A +EQID+ F GRY + FRPGKNSQK Q +SR Y+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR EDV+EFAEFFDGHVFV EKGTQFKTIVEYAPSQR+PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
F++L+AKP ENLPSAEIQLERREAERAG KDT IVTPLMDFVRQKRAAK S+R SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K++R+A G S+KR +E+RR T+MYVLRD+ K+ K+KST++LV +RD+
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQAXXXX 1004
L++KS+ LAA GAE LE+E+ ++ GK+K L LKGKERE+S
Sbjct: 241 LSDKSVNLAAGGGAEALEEES---------GVSGAVDAGKKKVLLLKGKEREISHHLLQQ 291
Query: 1003 XXXXXXXGF------RQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDK 842
+QNQRREGSGR+IRSI +NK+ARQ QSS + + Q NLEK+K
Sbjct: 292 NVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEK 351
Query: 841 RPPRPNSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNK 662
RPPRP I+ SK+ G+ VGND+HSFV +EKQD+R RNK
Sbjct: 352 RPPRPPHIQLASKETNGA---------------QDDKVVGNDVHSFV--SEKQDKRTRNK 394
Query: 661 DRPDRGVWTPMRR 623
DRPDRGVWTP+RR
Sbjct: 395 DRPDRGVWTPLRR 407
Score = 77.0 bits (188), Expect = 5e-11
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = -2
Query: 397 DFPL-NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDG 227
DFP +HGEM+ D +S ++SGE++ GS R S ++NGS H+ GRRGP HS+K+ DG
Sbjct: 429 DFPEGSHGEMRSD-MSNARSGEVKALGSGRGGHSALDNGS-HKHSGRRGPT-HSVKDADG 485
Query: 226 SLNLSEGKPPKRGGATGYGSHE 161
S +SEGK KRG A GYGSHE
Sbjct: 486 SSIVSEGKHSKRGSAPGYGSHE 507
>OAY39705.1 hypothetical protein MANES_10G116400 [Manihot esculenta]
Length = 501
Score = 468 bits (1203), Expect = e-154
Identities = 246/427 (57%), Positives = 309/427 (72%), Gaps = 1/427 (0%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK ++TKVVVRHLPP I Q LMEQID FAGRY W+ FRPGKNSQK+Q +SR YIDF
Sbjct: 1 MKGQSEKTKVVVRHLPPTISQVMLMEQIDFAFAGRYNWVSFRPGKNSQKHQSYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR E V+EFAEFF+GH+FV EKGTQF+ +VEYAPSQRVPK WSKKDGREGTI KDP YLE
Sbjct: 61 KRPEAVMEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL LI+KPAENLPSAE+QLERREAERAG KD I+TPLMDFVRQKRAAKSG++R +NG
Sbjct: 121 FLKLISKPAENLPSAEVQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGTRRILTNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K +R+AG S+KR+++++RG T+MYVLRDS+K+ GK+KSTY+L+ +RD+
Sbjct: 181 KRSRRAGA--SGSPSSSSSKRSSDKKRGSTTMYVLRDSVKSTSGKDKSTYILIPKRDDQH 238
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVSQAXXXX 1004
L++K++ LA+A+G E+LEDE+ +TGKRK L LKGKE+E+S
Sbjct: 239 LSDKAVNLASASGTEVLEDES---------GVSGITDTGKRKILLLKGKEKEISTNTTSF 289
Query: 1003 XXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDKRPPRPN 824
+Q+QRRE +GR+IRSI ++K++RQ+ SS + + + QT NLEKDKRPPRP
Sbjct: 290 DKNQTSSVLKQSQRREATGRIIRSILLHKDSRQNHSSGVQSEQQTQTSNLEKDKRPPRPQ 349
Query: 823 SIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPDRG 644
++ + KD G+ VGNDLHSF + EKQ++R RNKDRPDRG
Sbjct: 350 HVQLILKDANGA---------------SDDKVVGNDLHSF--SGEKQEKRTRNKDRPDRG 392
Query: 643 VWTPMRR 623
VW P+RR
Sbjct: 393 VWAPLRR 399
Score = 85.1 bits (209), Expect = 1e-13
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Frame = -2
Query: 385 NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDGSLNLS 212
N G++KV+ L+ S+ GEI+T G R S ++NGS H+ GRRGP H++++VDGS
Sbjct: 419 NLGDIKVEPLN-SRGGEIKTLGGGRGGHSSLDNGS-HKHFGRRGP--HTVRDVDGSSG-- 472
Query: 211 EGKPPKRGGATGYGSHEKQVWVQKSGSGS 125
EGK KR G +GYGSHEKQVWVQKS SGS
Sbjct: 473 EGKLSKRVGVSGYGSHEKQVWVQKSSSGS 501
>OAY39706.1 hypothetical protein MANES_10G116400 [Manihot esculenta]
Length = 508
Score = 465 bits (1197), Expect = e-153
Identities = 247/428 (57%), Positives = 310/428 (72%), Gaps = 2/428 (0%)
Frame = -2
Query: 1900 MKDPFDRTKVVVRHLPPAIPQSALMEQIDSRFAGRYKWLCFRPGKNSQKNQQHSRVYIDF 1721
MK ++TKVVVRHLPP I Q LMEQID FAGRY W+ FRPGKNSQK+Q +SR YIDF
Sbjct: 1 MKGQSEKTKVVVRHLPPTISQVMLMEQIDFAFAGRYNWVSFRPGKNSQKHQSYSRAYIDF 60
Query: 1720 KRQEDVVEFAEFFDGHVFVIEKGTQFKTIVEYAPSQRVPKAWSKKDGREGTIFKDPEYLE 1541
KR E V+EFAEFF+GH+FV EKGTQF+ +VEYAPSQRVPK WSKKDGREGTI KDP YLE
Sbjct: 61 KRPEAVMEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAYLE 120
Query: 1540 FLDLIAKPAENLPSAEIQLERREAERAGGPKDTLIVTPLMDFVRQKRAAKSGSQRPSSNG 1361
FL LI+KPAENLPSAE+QLERREAERAG KD I+TPLMDFVRQKRAAKSG++R +NG
Sbjct: 121 FLKLISKPAENLPSAEVQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGTRRILTNG 180
Query: 1360 KITRKAGGVXXXXXXXXSTKRATERRRGPTSMYVLRDSMKNVGGKEKSTYVLVSRRDEHQ 1181
K +R+AG S+KR+++++RG T+MYVLRDS+K+ GK+KSTY+L+ +RD+
Sbjct: 181 KRSRRAGA--SGSPSSSSSKRSSDKKRGSTTMYVLRDSVKSTSGKDKSTYILIPKRDDQH 238
Query: 1180 LTEKSIALAAATGAEILEDETVPXXXXXXXXXXXTIETGKRK-LPLKGKEREVS-QAXXX 1007
L++K++ LA+A+G E+LEDE+ +TGKRK L LKGKE+E+S Q
Sbjct: 239 LSDKAVNLASASGTEVLEDES---------GVSGITDTGKRKILLLKGKEKEISTQNTTS 289
Query: 1006 XXXXXXXXGFRQNQRREGSGRMIRSIPINKEARQHQSSSLAVQSEQQTLNLEKDKRPPRP 827
+Q+QRRE +GR+IRSI ++K++RQ+ SS + + + QT NLEKDKRPPRP
Sbjct: 290 FDKNQTSSVLKQSQRREATGRIIRSILLHKDSRQNHSSGVQSEQQTQTSNLEKDKRPPRP 349
Query: 826 NSIRSVSKDHIGSIGPPAGLSXXXXXXXXXXXXVGNDLHSFVPTNEKQDRRMRNKDRPDR 647
++ + KD G+ VGNDLHSF + EKQ++R RNKDRPDR
Sbjct: 350 QHVQLILKDANGA---------------SDDKVVGNDLHSF--SGEKQEKRTRNKDRPDR 392
Query: 646 GVWTPMRR 623
GVW P+RR
Sbjct: 393 GVWAPLRR 400
Score = 85.1 bits (209), Expect = 1e-13
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Frame = -2
Query: 385 NHGEMKVDILSASKSGEIRTHGSSRS--SPIENGSNHRFVGRRGPAAHSLKEVDGSLNLS 212
N G++KV+ L+ S+ GEI+T G R S ++NGS H+ GRRGP H++++VDGS
Sbjct: 426 NLGDIKVEPLN-SRGGEIKTLGGGRGGHSSLDNGS-HKHFGRRGP--HTVRDVDGSSG-- 479
Query: 211 EGKPPKRGGATGYGSHEKQVWVQKSGSGS 125
EGK KR G +GYGSHEKQVWVQKS SGS
Sbjct: 480 EGKLSKRVGVSGYGSHEKQVWVQKSSSGS 508