BLASTX nr result
ID: Magnolia22_contig00011116
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00011116
(3073 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC42215.1 polyprotein [Barley mild mosaic virus] 69 4e-08
NP_734295.1 CI protein [Barley mild mosaic virus] 68 8e-08
CAD66659.1 polyprotein [Barley mild mosaic virus] 68 1e-07
NP_604491.1 RNA1 polyprotein [Barley mild mosaic virus] CAA71869... 68 1e-07
CAA71870.1 RNA1 polyprotein [Barley mild mosaic virus] 67 2e-07
P90245.1 RecName: Full=Genome polyprotein 1; Contains: RecName: ... 67 2e-07
CAD66660.1 polyprotein [Barley mild mosaic virus] 66 4e-07
CAD66658.1 polyprotein [Barley mild mosaic virus] 66 5e-07
AAQ10758.1 polyprotein [Barley mild mosaic virus] 66 5e-07
AMQ75908.1 polyprotein [Yam chlorotic necrotic mosaic virus] 65 6e-07
CAB44430.1 RNA1 polyprotein [Barley mild mosaic virus] 64 2e-06
WP_063528865.1 ATP-dependent helicase HrpB [Pseudoalteromonas sh... 63 2e-06
YP_006590097.1 CI protein [Chinese yam necrotic mosaic virus] 63 3e-06
ANJ16151.1 polyprotein [Chinese yam necrotic mosaic virus] 63 4e-06
YP_006590058.1 polyprotein [Chinese yam necrotic mosaic virus] B... 63 4e-06
XP_012154979.1 PREDICTED: probable ATP-dependent RNA helicase DH... 62 5e-06
XP_004517668.1 PREDICTED: probable ATP-dependent RNA helicase DH... 62 5e-06
WP_008046744.1 ATP-dependent helicase HrpB [Reinekea blandensis]... 62 5e-06
ANF06857.1 polyprotein [Chinese yam necrotic mosaic virus] 62 5e-06
WP_027272289.1 ATP-dependent helicase HrpB [Legionella sainthele... 62 6e-06
>AAC42215.1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 69.3 bits (168), Expect = 4e-08
Identities = 133/595 (22%), Positives = 243/595 (40%), Gaps = 36/595 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + S + +
Sbjct: 560 FESICQEV---TNVRKFYVSATPRDGKKCPEAVRRYEIKTVKTECSSVDTFVRSQEKENT 616
Query: 811 LHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
L+ N + LVFL D W+ Y N H+L F + E I+ + +
Sbjct: 617 LYVLNHDT-VLVFLAGKAECDRAASNWNKLYSTNMYAHSLTGDNFTIA--YEKIVTRM-L 672
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 673 TERTIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIY-VWIWTKMFNIIVKNSEIAQYEQLLGDFS 1326
R G A + + + + +L P + +Y + + + + +E + + G +
Sbjct: 733 GRLRTGYA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIQG-VT 787
Query: 1327 KEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFVDNW 1500
K ++M +L P L+ + DG + S ILK H + I SH ++W
Sbjct: 788 KSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHIYNSW 847
Query: 1501 PEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKYDVN 1641
P + T QS + PF + +FP W+ A + + V
Sbjct: 848 PLYRTVQQSISRGDSNVPQALRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VLQVF 903
Query: 1642 FDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLPFMP 1821
DN+S ++ ++ +I +I S++ N+ Y R S +R K S + S F
Sbjct: 904 SDNSS--TSRIINLQIGKMHIINSMEEVKINIHSYQR--SAEGLRSVKDSFE--SSIFRT 957
Query: 1822 KTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
K ++ + R +T + +V+ V +I + GE + + K+ V+ L++
Sbjct: 958 KLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEMIAYSGGEKVNMDKKSVDELNE 1012
>NP_734295.1 CI protein [Barley mild mosaic virus]
Length = 658
Score = 67.8 bits (164), Expect = 8e-08
Identities = 132/598 (22%), Positives = 243/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 91 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 148
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAH-EASYAYY 630
R + ++ K+ + Y SA L + D +++ + ++LDE+H ++A
Sbjct: 149 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDA--VFLDESHLITTHALV 200
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + T+ +++ +
Sbjct: 201 FESI---CQEVTNVRKFYVSATPRDGKKCPEAVRRYEIKT-VKTECSSVDTFVRSQEKEN 256
Query: 811 LHYKNISSRTLVFL----PTDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
Y LVFL D W+ Y N ++L F + E I+ + +
Sbjct: 257 TLYVLNHDTVLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTIA--YEKIVTRM-L 313
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 314 TERTIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 373
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 374 GRLRTGYA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 427
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFV 1491
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 428 --TKSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHIY 485
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 486 NSWPLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 541
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V DN+S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 542 QVFSDNSS--TSRIINLQIGKMHIVNSMEEVKINIHSYQR--SAENLRSVKDSFE--SSI 595
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ V +I + GE + + K+ V+ L++
Sbjct: 596 FRTKLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEMIAYSGGEKVNMDKKSVDELNE 653
>CAD66659.1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 67.8 bits (164), Expect = 1e-07
Identities = 132/595 (22%), Positives = 239/595 (40%), Gaps = 36/595 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWNNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHPITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + S +T+
Sbjct: 560 FESICQEV---TNIRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQEKTNS 616
Query: 811 LHYKNISSRTLVFLP----TDNEIELWDDYYDNHDVHTLLFRTFDTSKKLESIMNALSIK 978
L+ + + LVFL D W+ Y + ++ + + E I+ + K
Sbjct: 617 LYVLDHDT-VLVFLAGKAECDRAASNWNKLYSTN-MYAYSLTDDNFTMAYEKIVTEMLTK 674
Query: 979 APVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRVD 1158
+V T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 675 RTIVFC-TNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRAG 733
Query: 1159 RHLPGIAYYNNVVLSSDDGELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLGDFS 1326
R G A + D L P + +Y + I ++ E A E + +
Sbjct: 734 RLRTGHAICIGNPKTRHD--LVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV----T 787
Query: 1327 KEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFVDNW 1500
K ++M +L P L+ + DG + S ILK H + I SH ++W
Sbjct: 788 KAQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHVYNSW 847
Query: 1501 PEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKYDVN 1641
P + T QS + PF + +FP W+ A + + V
Sbjct: 848 PLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VLQVF 903
Query: 1642 FDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLPFMP 1821
D++S ++ ++ +I +I S++ N+ Y R S +R K S + S F
Sbjct: 904 SDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQR--SAENLRSVKDSFE--SSIFRT 957
Query: 1822 KTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
K ++ + R +T + +V+ + +I + GE + + K+ V+ L++
Sbjct: 958 KLLRGNPTGKITKRIETLLDNVRVLQQIHAKLEMIAYSGGEKINMDKKSVDELNE 1012
>NP_604491.1 RNA1 polyprotein [Barley mild mosaic virus] CAA71869.1 RNA1
polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 67.8 bits (164), Expect = 1e-07
Identities = 132/598 (22%), Positives = 243/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAH-EASYAYY 630
R + ++ K+ + Y SA L + D +++ + ++LDE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDA--VFLDESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + T+ +++ +
Sbjct: 560 FESI---CQEVTNVRKFYVSATPRDGKKCPEAVRRYEIKT-VKTECSSVDTFVRSQEKEN 615
Query: 811 LHYKNISSRTLVFL----PTDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
Y LVFL D W+ Y N ++L F + E I+ + +
Sbjct: 616 TLYVLNHDTVLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTIA--YEKIVTRM-L 672
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 673 TERTIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 733 GRLRTGYA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 786
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFV 1491
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 787 --TKSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHIY 844
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 845 NSWPLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 900
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V DN+S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 901 QVFSDNSS--TSRIINLQIGKMHIVNSMEEVKINIHSYQR--SAENLRSVKDSFE--SSI 954
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ V +I + GE + + K+ V+ L++
Sbjct: 955 FRTKLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEMIAYSGGEKVNMDKKSVDELNE 1012
>CAA71870.1 RNA1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 67.4 bits (163), Expect = 2e-07
Identities = 132/598 (22%), Positives = 243/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAH-EASYAYY 630
R + ++ K+ + Y SA L + D +++ + ++LDE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDA--VFLDESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + T+ +++ +
Sbjct: 560 FESI---CQEVTNVRKFYVSATPRDGKKCPEAVRRYEIKT-VKTECSSVDTFVRSQEKEN 615
Query: 811 LHYKNISSRTLVFL----PTDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
Y LVFL D W+ Y N ++L F + E I+ + +
Sbjct: 616 TLYVLNHDTVLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTIA--YEKIVTRM-L 672
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 673 TERTIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 733 GRLRTGYA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 786
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFV 1491
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 787 --TKSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHIY 844
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 845 NSWPLYRTVHQSISRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 900
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V DN+S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 901 QVFSDNSS--TSRIINLQIGKMHIINSMEEVKINIHSYQR--SAENLRSVKDSFE--SSI 954
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ V +I + GE + + K+ V+ L++
Sbjct: 955 FRTKLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEMIAYSGGEKVNMDKKSVDELNE 1012
>P90245.1 RecName: Full=Genome polyprotein 1; Contains: RecName: Full=Protein
P3; Contains: RecName: Full=6 kDa protein 1; Short=6K1;
Contains: RecName: Full=Cytoplasmic inclusion protein;
Short=CI; Contains: RecName: Full=6 kDa protein 2;
Short=6K2; Contains: RecName: Full=Viral genome-linked
protein; AltName: Full=VPg; Contains: RecName:
Full=Nuclear inclusion protein A; Short=NI-a; Short=NIa;
AltName: Full=NIa-pro; Contains: RecName: Full=Nuclear
inclusion protein B; Short=NI-b; Short=NIb; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Coat protein; Short=CP BAA18953.1 polyprotein
precursor [Barley mild mosaic virus]
Length = 2258
Score = 67.0 bits (162), Expect = 2e-07
Identities = 134/601 (22%), Positives = 246/601 (40%), Gaps = 42/601 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTM---AVKGTRARNVPVPLDTKNFPLESPSSVPQ 801
F + + ++ R F+ +AT AV+ + V + + + S
Sbjct: 560 FESICQEV---TNVRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQDKENS 616
Query: 802 TSPLHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNA 966
L ++ + LVFL D W+ Y N ++L F + E+I+
Sbjct: 617 LYVLQHETV----LVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTVA--YENIVTR 670
Query: 967 LSIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRS 1146
+ + +++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR
Sbjct: 671 M-LTDRIIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRI 729
Query: 1147 GRVDRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQ 1308
GR R G A + + + + +L P + +Y + I ++ E A E
Sbjct: 730 GRAGRLRTGHA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEG 785
Query: 1309 LLGDFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNS 1482
+ +K ++M +L P L+ + DG + S ILK+ H + I S
Sbjct: 786 V----TKSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKNYTHRNTDLIGTKLSVMS 841
Query: 1483 HFVDNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKE 1623
H ++WP + T QS PF + +FP W+ A + +
Sbjct: 842 HVYNSWPLYRTVHQSIFRGDSNVPQALKHARVPFNVSTAHDFP--WENFAQACLEFQPR- 898
Query: 1624 DKYDVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDI 1803
V D++S ++ ++ +I +I S++ N+ Y R S +R K S +
Sbjct: 899 -VLQVFSDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQR--SAENLRSVKDSFE-- 951
Query: 1804 SLPFMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLD 1965
S F K ++ + R +T + +V+ V +I + GE + + K+ V+ L+
Sbjct: 952 SSIFRTKLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEIIAYSGGEKLNMDKKSVDELN 1011
Query: 1966 Q 1968
+
Sbjct: 1012 E 1012
>CAD66660.1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 66.2 bits (160), Expect = 4e-07
Identities = 134/598 (22%), Positives = 243/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + S +T+
Sbjct: 560 FESICQEV---TNIRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQEKTNS 616
Query: 811 LHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
L+ + + LVFL D W+ Y N ++L F + E I+ +
Sbjct: 617 LYVLDHDT-VLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTMA--YEKIVTEMLT 673
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
K +V T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 674 KRTIVFC-TNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 733 GRLRTGHA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 786
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFV 1491
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 787 --TKAQASVMTQFKLSPFLMRDIVRDDGAIPPSPHKILKDYTHRNTDLIGTKLSVMSHVY 844
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 845 NSWPLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 900
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V D++S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 901 QVFSDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQR--SAENLRSVKDSFE--SSI 954
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ + +I + GE + + K+ V+ L++
Sbjct: 955 FRTKLLRGNPTGKITKRIETLLDNVRVLQQIHAKLEMIAYSGGEKINMDKKSVDELNE 1012
>CAD66658.1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 65.9 bits (159), Expect = 5e-07
Identities = 134/598 (22%), Positives = 244/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + S +T+
Sbjct: 560 FESICQEV---TNIRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQEKTNS 616
Query: 811 LHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
L+ + LVFL D W+ Y N ++L F + E I+ +
Sbjct: 617 LYVLEHDT-VLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTMA--YEKIVTEMLT 673
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
K +V T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 674 KRTIVFC-TNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 733 GRLRTGHA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 786
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTDKTIAVSGDS-NSHFV 1491
+K ++M +L P L+ + DG + S ILK H + + + S SH
Sbjct: 787 --TKAQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLVGTKLSVMSHVY 844
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 845 NSWPLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 900
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V D++S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 901 QVFSDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQR--SAENLRSVKDSFE--SSI 954
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ + +I + GE + + K+ V+ L++
Sbjct: 955 FRTKLLRGNPTGKITKRIETLLDNVRVLQQIHAKLEMIAYSGGEKINMDKKSVDELNE 1012
>AAQ10758.1 polyprotein [Barley mild mosaic virus]
Length = 2261
Score = 65.9 bits (159), Expect = 5e-07
Identities = 134/599 (22%), Positives = 243/599 (40%), Gaps = 40/599 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 452 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 509
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 510 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 561
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVP-VPLDTKNFPLESPSSVPQTS 807
F + + ++ R F+ +AT + R + V + + S + S
Sbjct: 562 FESIC---QEATNVRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSIDTFVRSQEKENS 618
Query: 808 PLHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALS 972
K+ LVFL D W+ Y N ++L F + E+I+ +
Sbjct: 619 LYVLKH--DTVLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTVA--YENIVTRM- 673
Query: 973 IKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGR 1152
+ +++ T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 674 LTDRIIVFCTNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGR 733
Query: 1153 VDRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLL 1314
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 734 AGRLRTGHA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV- 788
Query: 1315 GDFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHF 1488
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 789 ---TKSQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHV 845
Query: 1489 VDNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDK 1629
++WP + T QS PF + +FP W+ A + +
Sbjct: 846 YNSWPLYRTVHQSIFRGDSNVPQALKHARVPFNVSTAHDFP--WENFAQACLEFQPR--V 901
Query: 1630 YDVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISL 1809
V D++S ++ ++ +I +I S++ N+ Y R S +R K S + S
Sbjct: 902 LQVFSDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQR--SAENLRSVKDSFE--SS 955
Query: 1810 PFMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ V +I + GE + + K+ V+ L++
Sbjct: 956 IFRTKLLRGNPTGKITKRIETLLDNVRVLQQVHAKLEIIAYSGGEKLNMDKKSVDELNE 1014
>AMQ75908.1 polyprotein [Yam chlorotic necrotic mosaic virus]
Length = 2622
Score = 65.5 bits (158), Expect = 6e-07
Identities = 94/427 (22%), Positives = 171/427 (40%), Gaps = 23/427 (5%)
Frame = +1
Query: 292 LIAETGVGKTTRLPL----KLXXXXXXXGIVLL--PNDLLVAHITK-----------YVK 420
+I +TG GK+TR+PL KL +L+ P ++ Y
Sbjct: 714 VIGQTGSGKSTRVPLSYYNKLQTISGRCRNILICEPTKATAQNVAAALSTQHGKQVFYKH 773
Query: 421 DNASRMGFPGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLD 600
+ + G P ++V + + +Y S N P F + N ++LD
Sbjct: 774 EGKEQAGDPTIQV-----------MTYGSAFYRSCNN--PAFLS--------NFDAVFLD 812
Query: 601 EAHEASYAYYFIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLE 780
E+H S + L+ + R F+ +AT + GTR + +
Sbjct: 813 ESHLISAHALSLESLLNKN--NRVRKFYLSATPRKSFPQQTGTRRFEIFEHQVESGDVSD 870
Query: 781 SPSSVPQTSPLHYKNISSRTLVFLPTDNEIELWDDYYD--NHDVHTLLFRTFDTSKKLES 954
S++ S L +TLVFL E + + N V + + S
Sbjct: 871 LISAIGTGSILDATKFGDKTLVFLSGKKECDRAAAKVNSTNTRVKAVSLHRDNFSTNYNR 930
Query: 955 IMNALSIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAER 1134
+ + L+ I T L+TG T+N+D V+D G+T ++ + T+ L R VT AER
Sbjct: 931 VCDELNQPGKCYIFATNILETGVTLNVDVVVDFGFTNAPTLNTTDKTLLLTKRRVTQAER 990
Query: 1135 IQRSGRVDRHLPGIAYYNNVVLSSDDGELTPSQAIY-VWIWTKMFNIIVKNSEIAQYEQL 1311
QR GR R G A + +S E+ + ++ + + ++N+ V + A ++Q
Sbjct: 991 KQRIGRAGRLKDGHAII--IGKTSTPFEVVSADVVFEAALLSFIYNLDVYVN--AHFDQA 1046
Query: 1312 -LGDFSKEYFALMLCSRLHPILITPYMNTDGELYSGW-SILK-HVFHTDKTIAVSGDSNS 1482
L +++ M+ ++ P ++ + +G + LK H+ H+ A + +
Sbjct: 1047 WLSSITRDQAKTMMAFKISPFIMKDLVFANGHMRGEMLDFLKPHLHHSANIKATNYQCVN 1106
Query: 1483 HFVDNWP 1503
H ++WP
Sbjct: 1107 HIYESWP 1113
>CAB44430.1 RNA1 polyprotein [Barley mild mosaic virus]
Length = 2258
Score = 63.5 bits (153), Expect = 2e-06
Identities = 133/598 (22%), Positives = 242/598 (40%), Gaps = 39/598 (6%)
Frame = +1
Query: 292 LIAETGVGKTTRLP------LKLXXXXXXXGIVLLPNDLLVAHITKYVKDNASRMGFPGV 453
++ TG GK+TRLP LK +V P ++T + N R+ +
Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYG-- 507
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHE-ASYAYY 630
R + ++ K+ + Y SA L + D +++ + FL DE+H ++A
Sbjct: 508 RHEGWSNLGDKTI---QVMTYGSA---LAAWKVDNKFLSQFDAVFL--DESHLITTHALV 559
Query: 631 FIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSP 810
F + + ++ R F+ +AT + R + + S +T+
Sbjct: 560 FESICQEV---TNIRKFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQEKTNS 616
Query: 811 LHYKNISSRTLVFLP----TDNEIELWDDYYD-NHDVHTLLFRTFDTSKKLESIMNALSI 975
L+ + + LVFL D W+ Y N ++L F + E I+ +
Sbjct: 617 LYVLDHDT-VLVFLAGKAECDRAASNWNKLYSTNMYAYSLTGDNFTMA--YEKIVTEMLT 673
Query: 976 KAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRV 1155
K +V T L+TG T+N+D V+D G+T +D ++ L+ R VT ER QR GR
Sbjct: 674 KRTIVFC-TNILETGVTLNVDCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRA 732
Query: 1156 DRHLPGIAYYNNVVLSSDD--GELTPSQAIYVWIWTKMFN----IIVKNSEIAQYEQLLG 1317
R G A + + + + +L P + +Y + I ++ E A E +
Sbjct: 733 GRLRTGHA----ICIGNPETRHDLVPPETLYEAALLSFVHGVQFYINEHFENAWIEGV-- 786
Query: 1318 DFSKEYFALMLCSRLHPILITPYMNTDGEL-YSGWSILKHVFHTD-KTIAVSGDSNSHFV 1491
+K ++M +L P L+ + DG + S ILK H + I SH
Sbjct: 787 --TKAQASVMTQFKLSPFLMRDIVRDDGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHVY 844
Query: 1492 DNWPEHNTGPQS-------------WTTEPFGYRSRANFPREWQVLPAAAWKMYKKEDKY 1632
++WP + T QS + PF + +FP W+ A + +
Sbjct: 845 NSWPLYRTVHQSIFRGDSNVPQTLRYARVPFNVSTAHDFP--WEDFAQACLEFQPR--VL 900
Query: 1633 DVNFDNASVVSALVVEPKISLGNIKTSLKSKASNVTKYTRPFSVVTVRHPKSSEDDISLP 1812
V D++S ++ ++ +I +I S++ N+ Y S +R K S + S
Sbjct: 901 QVFSDSSS--TSRIINLQIGKMHIVNSMEEVKININSYQP--SAENLRSVKDSFE--SSI 954
Query: 1813 FMPKTIKND------VRKQTEVTSVKSQVAVERPKAVIPSASGETMPVVKQWVESLDQ 1968
F K ++ + R +T + +V+ + +I + GE + + K+ V+ L++
Sbjct: 955 FRTKLLRGNPTGKITKRIETLLDNVRVLQQIHAKLEMIAYSGGEKINMDKKSVDELNE 1012
>WP_063528865.1 ATP-dependent helicase HrpB [Pseudoalteromonas shioyasakiensis]
KZY46427.1 ATP-dependent helicase [Pseudoalteromonas
shioyasakiensis]
Length = 806
Score = 63.2 bits (152), Expect = 2e-06
Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 21/326 (6%)
Frame = +1
Query: 268 IQIGETKMLIAETGVGKTTRLPLKLXXXXXXXGIVLL-PNDLLVAHITKYVKDNASRMGF 444
+Q +L A G GK+T LPL L IV+L P L +I +Y+ +
Sbjct: 15 LQSNPMALLQAPPGAGKSTWLPLTLMREGHFKRIVMLEPRRLAARNIAQYLASQQNEKVG 74
Query: 445 PGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEASYA 624
V + I +S ++ A E L R + ++ ++ L DE HE S A
Sbjct: 75 DSVGL----RIRGESKVSSATKLEIVTEGMLTRMLQNDPELS--DVDLLIFDEFHERSIA 128
Query: 625 Y-----YFIRMLVGLKFFSDTRVFFGTATCAGTTMA------VKGTRARNVPVPLDTKNF 771
+ + L+ D ++ +AT G + + ++ R+ P+ D
Sbjct: 129 ADTALAFALETQAALR--DDLKILLMSATLDGERYSEFFSCPIISSQGRSYPI--DEVYI 184
Query: 772 PLESPSSVPQTSPLHYKNISSR----TLVFLPTDNEI----ELWDDYYDNHDVHTLLFRT 927
PL+ S P K S LVFLP EI + +D DN ++ +L +
Sbjct: 185 PLKDESRWLDDIPAVIKQALSEQTGSALVFLPGQREIIRVQQSLNDLGDNVEIFSL-YGE 243
Query: 928 FDTSKKLESIMNALSIKAPVVILVTARLQTGFTMN-IDTVIDCGYTQIMHVDYSTATVNL 1104
+ +++ +I A + K VV L T +T T+ I V+D G + + + T L
Sbjct: 244 QNKNEQQAAIAPAKNGKRKVV-LTTNVAETSLTIEGIRIVVDSGKRRAANFNLKTGVTEL 302
Query: 1105 VVRNVTHAERIQRSGRVDRHLPGIAY 1182
V ++++ + IQR+GR R PG+ Y
Sbjct: 303 VTQSISRSSAIQRAGRAGRIEPGVGY 328
>YP_006590097.1 CI protein [Chinese yam necrotic mosaic virus]
Length = 656
Score = 62.8 bits (151), Expect = 3e-06
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Frame = +1
Query: 292 LIAETGVGKTTRLPLKLXXXXXXXGIVLLP---NDLLVAHITKYVKDNAS---------R 435
+I +TG GK+TR+PL I LP +L+ TK N + +
Sbjct: 82 VIGQTGSGKSTRVPLSYYNK-----IQTLPGRNRSILICEPTKATTQNVAAALSTQHGKQ 136
Query: 436 MGFPGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEA 615
+ F + I+ G+A +Y S N P F + N ++LDE+H
Sbjct: 137 VFFKHEGKEQAGDPTIQVMTYGSA-FYRSCNN--PAFLS--------NFDAVFLDESHLV 185
Query: 616 SYAYYFIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSV 795
S + L+ + R F+ +AT + G+R + + S++
Sbjct: 186 SAHALALESLLNKN--NRVRKFYLSATPRKQFPEMTGSRRFEIFEHQVESGDVNDLISAI 243
Query: 796 PQTSPLHYKNISSRTLVFLPTDNEIELWDDYYD--NHDVHTLLFRTFDTSKKLESIMNAL 969
+ + + + LVFL E + + N V + + S + + L
Sbjct: 244 GKGTIMDATKFGEKVLVFLSGKKECDRAATKVNSTNSGVKAISLHRDNFSANYNRLCHDL 303
Query: 970 SIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSG 1149
+ + I T L+TG T+N+D V+D G+T ++ S T+ L R VT AER QR G
Sbjct: 304 TQPGKIYIFATNILETGVTLNVDVVVDFGFTNTPVLNTSDKTLLLNKRRVTQAERKQRIG 363
Query: 1150 RVDRHLPGIAYYNNVVLSSDDGELTPSQAIYV-WIWTKMFNIIVKNSEI---AQYEQL-L 1314
R R G A +V+ TP + + ++ + N ++ A ++Q L
Sbjct: 364 RAGRLREGHA----IVIGKTS---TPFETVSADVVFEAALLSFIHNLDVYVNAHFDQAWL 416
Query: 1315 GDFSKEYFALMLCSRLHPILITPYMNTDGELYSGW-SILK-HVFHTDKTIAVSGDSNSHF 1488
+++ M+ ++ P ++ + +G + S LK H+ H+ + +H
Sbjct: 417 SSITRDQAKTMMAFKISPFIMKDLVFANGHIRSEMLEFLKPHLHHSANIKTTNYQCVNHI 476
Query: 1489 VDNWP 1503
++WP
Sbjct: 477 YESWP 481
>ANJ16151.1 polyprotein [Chinese yam necrotic mosaic virus]
Length = 2620
Score = 62.8 bits (151), Expect = 4e-06
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Frame = +1
Query: 292 LIAETGVGKTTRLPLKLXXXXXXXGIVLLP---NDLLVAHITKYVKDNAS---------R 435
+I +TG GK+TR+PL I LP +L+ TK N + +
Sbjct: 714 VIGQTGSGKSTRVPLSYYNK-----IQTLPGRNRSILICEPTKATTQNVAAALSTQHGKQ 768
Query: 436 MGFPGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEA 615
+ F + I+ G+A +Y S N P F + N ++LDE+H
Sbjct: 769 VFFKHEGKEQAGDPTIQVMTYGSA-FYRSCNN--PAFLS--------NFDAVFLDESHLV 817
Query: 616 SYAYYFIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSV 795
S + L+ + R F+ +AT + G+R + + S++
Sbjct: 818 SAHALALESLLNKN--NRVRKFYLSATPRKQFPEMTGSRRFEIFEHQVESGDVNDLISAI 875
Query: 796 PQTSPLHYKNISSRTLVFLPTDNEIELWDDYYD--NHDVHTLLFRTFDTSKKLESIMNAL 969
+ + + + LVFL E + + N V + + S + + L
Sbjct: 876 GKGTIMDATKFGEKVLVFLSGKKECDRAATKVNSTNSGVKAISLHRDNFSANYNRLCHDL 935
Query: 970 SIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSG 1149
+ + I T L+TG T+N+D V+D G+T ++ S T+ L R VT AER QR G
Sbjct: 936 TQPGKIYIFATNILETGVTLNVDVVVDFGFTNTPVLNTSDKTLLLNKRRVTQAERKQRIG 995
Query: 1150 RVDRHLPGIAYYNNVVLSSDDGELTPSQAIYV-WIWTKMFNIIVKNSEI---AQYEQL-L 1314
R R G A +V+ TP + + ++ + N ++ A ++Q L
Sbjct: 996 RAGRLREGHA----IVIGKTS---TPFETVSADVVFEAALLSFIHNLDVYVNAHFDQAWL 1048
Query: 1315 GDFSKEYFALMLCSRLHPILITPYMNTDGELYSGW-SILK-HVFHTDKTIAVSGDSNSHF 1488
+++ M+ ++ P ++ + +G + S LK H+ H+ + +H
Sbjct: 1049 SSITRDQAKTMMAFKISPFIMKDLVFANGHIRSEMLEFLKPHLHHSANIKTTNYQCVNHI 1108
Query: 1489 VDNWP 1503
++WP
Sbjct: 1109 YESWP 1113
>YP_006590058.1 polyprotein [Chinese yam necrotic mosaic virus] BAM36463.1
polyprotein [Chinese yam necrotic mosaic virus]
Length = 2620
Score = 62.8 bits (151), Expect = 4e-06
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Frame = +1
Query: 292 LIAETGVGKTTRLPLKLXXXXXXXGIVLLP---NDLLVAHITKYVKDNAS---------R 435
+I +TG GK+TR+PL I LP +L+ TK N + +
Sbjct: 714 VIGQTGSGKSTRVPLSYYNK-----IQTLPGRNRSILICEPTKATTQNVAAALSTQHGKQ 768
Query: 436 MGFPGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEA 615
+ F + I+ G+A +Y S N P F + N ++LDE+H
Sbjct: 769 VFFKHEGKEQAGDPTIQVMTYGSA-FYRSCNN--PAFLS--------NFDAVFLDESHLV 817
Query: 616 SYAYYFIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSV 795
S + L+ + R F+ +AT + G+R + + S++
Sbjct: 818 SAHALALESLLNKN--NRVRKFYLSATPRKQFPEMTGSRRFEIFEHQVESGDVNDLISAI 875
Query: 796 PQTSPLHYKNISSRTLVFLPTDNEIELWDDYYD--NHDVHTLLFRTFDTSKKLESIMNAL 969
+ + + + LVFL E + + N V + + S + + L
Sbjct: 876 GKGTIMDATKFGEKVLVFLSGKKECDRAATKVNSTNSGVKAISLHRDNFSANYNRLCHDL 935
Query: 970 SIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSG 1149
+ + I T L+TG T+N+D V+D G+T ++ S T+ L R VT AER QR G
Sbjct: 936 TQPGKIYIFATNILETGVTLNVDVVVDFGFTNTPVLNTSDKTLLLNKRRVTQAERKQRIG 995
Query: 1150 RVDRHLPGIAYYNNVVLSSDDGELTPSQAIYV-WIWTKMFNIIVKNSEI---AQYEQL-L 1314
R R G A +V+ TP + + ++ + N ++ A ++Q L
Sbjct: 996 RAGRLREGHA----IVIGKTS---TPFETVSADVVFEAALLSFIHNLDVYVNAHFDQAWL 1048
Query: 1315 GDFSKEYFALMLCSRLHPILITPYMNTDGELYSGW-SILK-HVFHTDKTIAVSGDSNSHF 1488
+++ M+ ++ P ++ + +G + S LK H+ H+ + +H
Sbjct: 1049 SSITRDQAKTMMAFKISPFIMKDLVFANGHIRSEMLEFLKPHLHHSANIKTTNYQCVNHI 1108
Query: 1489 VDNWP 1503
++WP
Sbjct: 1109 YESWP 1113
>XP_012154979.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X2
[Ceratitis capitata]
Length = 671
Score = 62.0 bits (149), Expect = 5e-06
Identities = 86/330 (26%), Positives = 132/330 (40%), Gaps = 25/330 (7%)
Frame = +1
Query: 268 IQIGETKMLIAETGVGKTTRLPLKLXXXXXXX-GIVLLPNDLLVAHITKYVKDNASRMGF 444
++ + +L+ ETG GK+T+LP L GI+ L ++ IT + R
Sbjct: 59 LEKNQVLILVGETGSGKSTQLPQYLYELGWHTKGIIGLTQPRRISAITLANRVATERGET 118
Query: 445 PGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEASYA 624
G V + ++ + AV Y + L D + M S + +DEAHE +
Sbjct: 119 VGGSVGFVVKF-LEKTSDATAVKYMTEGILLRELLTDPLL---MRYSVIVIDEAHERNLI 174
Query: 625 YYFIRMLVGLKFFSDTR----VFFGTATCAGTTMA---------VKGTRARNVPVPLDTK 765
I L LK + R + +AT T A + R P+
Sbjct: 175 TDIIIGL--LKKVVNKRPAIKLVISSATIDADTFADFFKANSSIILSVEGRTHPISTFYL 232
Query: 766 NFPLES--PSSVPQTSPLHYKNISSRTLVFLPTDNEI----ELWDDYYDNHDVHTL---- 915
N P +V +H K LVFL E+ L DY +HD +TL
Sbjct: 233 NNPCADYVKEAVETVWKIHKKEGQGDILVFLTGQEEVLQAVSLTKDYISSHDDNTLQALP 292
Query: 916 LFRTFDTSKKLESIMNALSIKAPVVILVTARLQTGFTM-NIDTVIDCGYTQIMHVDYSTA 1092
++ + T K+ + A VI T +T T+ + VIDCG+ ++ D +A
Sbjct: 293 MYGSL-THKEQLKVFFAPEKGVRKVIYATNIAETSITIPGVVYVIDCGFIKLKWFDSDSA 351
Query: 1093 TVNLVVRNVTHAERIQRSGRVDRHLPGIAY 1182
T LVV ++ A +QR+GR R PG Y
Sbjct: 352 TDQLVVVPISKATAMQRAGRAGRTRPGKVY 381
>XP_004517668.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1
[Ceratitis capitata]
Length = 677
Score = 62.0 bits (149), Expect = 5e-06
Identities = 86/330 (26%), Positives = 132/330 (40%), Gaps = 25/330 (7%)
Frame = +1
Query: 268 IQIGETKMLIAETGVGKTTRLPLKLXXXXXXX-GIVLLPNDLLVAHITKYVKDNASRMGF 444
++ + +L+ ETG GK+T+LP L GI+ L ++ IT + R
Sbjct: 65 LEKNQVLILVGETGSGKSTQLPQYLYELGWHTKGIIGLTQPRRISAITLANRVATERGET 124
Query: 445 PGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEASYA 624
G V + ++ + AV Y + L D + M S + +DEAHE +
Sbjct: 125 VGGSVGFVVKF-LEKTSDATAVKYMTEGILLRELLTDPLL---MRYSVIVIDEAHERNLI 180
Query: 625 YYFIRMLVGLKFFSDTR----VFFGTATCAGTTMA---------VKGTRARNVPVPLDTK 765
I L LK + R + +AT T A + R P+
Sbjct: 181 TDIIIGL--LKKVVNKRPAIKLVISSATIDADTFADFFKANSSIILSVEGRTHPISTFYL 238
Query: 766 NFPLES--PSSVPQTSPLHYKNISSRTLVFLPTDNEI----ELWDDYYDNHDVHTL---- 915
N P +V +H K LVFL E+ L DY +HD +TL
Sbjct: 239 NNPCADYVKEAVETVWKIHKKEGQGDILVFLTGQEEVLQAVSLTKDYISSHDDNTLQALP 298
Query: 916 LFRTFDTSKKLESIMNALSIKAPVVILVTARLQTGFTM-NIDTVIDCGYTQIMHVDYSTA 1092
++ + T K+ + A VI T +T T+ + VIDCG+ ++ D +A
Sbjct: 299 MYGSL-THKEQLKVFFAPEKGVRKVIYATNIAETSITIPGVVYVIDCGFIKLKWFDSDSA 357
Query: 1093 TVNLVVRNVTHAERIQRSGRVDRHLPGIAY 1182
T LVV ++ A +QR+GR R PG Y
Sbjct: 358 TDQLVVVPISKATAMQRAGRAGRTRPGKVY 387
>WP_008046744.1 ATP-dependent helicase HrpB [Reinekea blandensis] EAR10474.1
ATP-dependent helicase HrpB [Reinekea sp. MED297]
Length = 784
Score = 62.0 bits (149), Expect = 5e-06
Identities = 76/310 (24%), Positives = 126/310 (40%), Gaps = 15/310 (4%)
Frame = +1
Query: 289 MLIAETGVGKTTRLPLKLXXXXXXXGIVLLPNDLLVAHITKYVKDNAS-----RMGFPGV 453
++ A G GKTT+LPL +L+P L V + + D + R+G+ +
Sbjct: 28 IISAPPGSGKTTQLPLWFLDSGEAPIFLLIPKRLAVRMAARQLSDQLAEPVGQRVGYQ-L 86
Query: 454 RVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEASY---- 621
R DA S + + ++ FL D ++ + F DE HE S
Sbjct: 87 RDDAKTSASTR-------LVVTTYGTFLRILLNDPDRISGSTVIF---DEFHERSVDQDL 136
Query: 622 AYYFIRMLVGLKFFSDTRVFFGTAT-----CAGTTMAVKGTRARNVPVPLDTKNFPLESP 786
++ I + S R+ T + V + R+ PV L + ++ P
Sbjct: 137 SFALIHQYINELDDSVRRLIMSATLNIRELATQTGLPVIESDGRSYPVKLTYQPTNIKQP 196
Query: 787 SSVPQTSPLHYKNISSRTLVFLPTDNEIELWDDYYDNHDVHTLLFRTFDTSKKLESIMNA 966
+ + + Y+++ LVFLP EI + + D + +L T + + ++ A
Sbjct: 197 ADIARVIRNEYQHVEHHILVFLPGIREIRAIERHLDMPVL--ILHGTLNATPDVQ----A 250
Query: 967 LSIKAPVVILVTARLQTGFTM-NIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQR 1143
LS VIL T ++ T+ ++ TVID G + V T L R ++ A QR
Sbjct: 251 LSQAPATVILATNVAESSITLPSVHTVIDTGLERYAQVHPVTGLTELKTRRISQASATQR 310
Query: 1144 SGRVDRHLPG 1173
SGR R PG
Sbjct: 311 SGRAGRLGPG 320
>ANF06857.1 polyprotein [Chinese yam necrotic mosaic virus]
Length = 2620
Score = 62.4 bits (150), Expect = 5e-06
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Frame = +1
Query: 292 LIAETGVGKTTRLPLKLXXXXXXXGIVLLP---NDLLVAHITKYVKDNAS---------R 435
+I +TG GK+TR+PL I LP +L+ TK N + +
Sbjct: 714 VIGQTGSGKSTRVPLSYYNK-----IQTLPGRNRSILICEPTKATTQNVAAALSTQHGKQ 768
Query: 436 MGFPGVRVDALRSIHIKSPLNGAAVYYSSAENFLPRFHADRSMVTRMNISFLYLDEAHEA 615
+ F + I+ G+A +Y S N P F + N ++LDE+H
Sbjct: 769 VFFKHEGKEQAGDPTIQVMTYGSA-FYRSCNN--PAFLS--------NFDAVFLDESHLV 817
Query: 616 SYAYYFIRMLVGLKFFSDTRVFFGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSV 795
S + L+ + R F+ +AT + G+R + + S++
Sbjct: 818 SAHALALESLLNKN--NRVRKFYLSATPRKQFPEMTGSRRFEIFEHQVESGDVNDLISAI 875
Query: 796 PQTSPLHYKNISSRTLVFLPTDNEIELWDDYYD--NHDVHTLLFRTFDTSKKLESIMNAL 969
+ + + + LVFL E + + N + + + S + + L
Sbjct: 876 GKGTIMDATKFGEKVLVFLSGKKECDRAATKVNSTNSGIKAISLHRDNFSANYNRLCHDL 935
Query: 970 SIKAPVVILVTARLQTGFTMNIDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSG 1149
+ + I T L+TG T+N+D V+D G+T ++ S T+ L R VT AER QR G
Sbjct: 936 TQPGKIYIFATNILETGVTLNVDVVVDFGFTNTPVLNTSDKTLLLNKRRVTQAERKQRIG 995
Query: 1150 RVDRHLPGIAYYNNVVLSSDDGELTPSQAIYV-WIWTKMFNIIVKNSEI---AQYEQL-L 1314
R R G A +V+ TP + + ++ + N ++ A ++Q L
Sbjct: 996 RAGRLREGHA----IVIGKTS---TPFETVSADVVFEAALLSFIHNLDVYVNAHFDQAWL 1048
Query: 1315 GDFSKEYFALMLCSRLHPILITPYMNTDGELYSGW-SILK-HVFHTDKTIAVSGDSNSHF 1488
+++ M+ ++ P ++ + +G + S LK H+ H+ + +H
Sbjct: 1049 SSITRDQAKTMMAFKISPFIMKDLVFANGHIRSEMLEFLKPHLHHSANIKTTNYQCVNHI 1108
Query: 1489 VDNWP 1503
++WP
Sbjct: 1109 YESWP 1113
>WP_027272289.1 ATP-dependent helicase HrpB [Legionella sainthelensi] KTD59643.1
Helicase [Legionella sainthelensi]
Length = 866
Score = 62.0 bits (149), Expect = 6e-06
Identities = 93/363 (25%), Positives = 150/363 (41%), Gaps = 26/363 (7%)
Frame = +1
Query: 172 DIETRASIPPPLGQWVITADAFEKDV---VDQYKNIQIGETKMLIAETGVGKTTRLPLKL 342
+I T +I G + D F D+ V Y N+ ++ A G GKTTRLP +L
Sbjct: 2 NISTEGTIILKAGSTHLPIDDFIDDILQKVTSYTNL------VITAAPGAGKTTRLPPEL 55
Query: 343 XXXXXXXGIVLLPNDLL-VAHITKYVKDNASRMGFP-GVRVDALRSIHIKSPLNGAAVYY 516
+VL P + +A + ++N +G G +V + K+ L +Y
Sbjct: 56 LSVVAGKILVLEPRRMASIAAAHRVAEENNWLVGEEVGYQVRFVNKTSHKTRL----IYM 111
Query: 517 SSAENFLPRFHADRSMVTRMNISFLYLDEAHEASYAYYFIRMLVGL-----KFFSDTRVF 681
+ A L R + ++I + LDE HE S ++ + +GL + ++
Sbjct: 112 TEA--LLARHMIHHPELDDVDI--VILDEFHERSL---YVDLTLGLIRELQELGHHIKIV 164
Query: 682 FGTATCAGTTMAVKGTRARNVPVPLDTKNFPLESPSSVPQTSPLH--YKNISS------- 834
+AT +A + VP + S +P + Y+++S
Sbjct: 165 VMSATLEAEKIAEYLGNCPVISVPGKLYELTVRYQKSTQLLTPQYQFYEHLSQVIKEAQR 224
Query: 835 ----RTLVFLPTDNEIE-LWDDYYDNHDVHTLLFRTFDTSKKLESIMNALS-IKAPVVIL 996
LVFLP EIE ++ D + + T S LE+ AL A +IL
Sbjct: 225 QTDKDILVFLPGAREIERAKENLLDWKESKKIEVITLHGSLPLEAQRIALQKSSAQRIIL 284
Query: 997 VTARLQTGFTMN-IDTVIDCGYTQIMHVDYSTATVNLVVRNVTHAERIQRSGRVDRHLPG 1173
T ++ T++ +DTVID G +IM D T L + ++ A IQR+GR R PG
Sbjct: 285 ATNIAESSVTLDGVDTVIDSGLVKIMKQDLRTGFSRLEISRISLASAIQRAGRAARQFPG 344
Query: 1174 IAY 1182
+ Y
Sbjct: 345 VCY 347