BLASTX nr result
ID: Magnolia22_contig00008355
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00008355
(1845 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009268710.1 replication-associated polyprotein [Fusarium gram... 104 2e-19
AQM49922.1 replicase [Agaricus bisporus virus 7] 86 2e-13
YP_446992.1 replicase protein [Nerine virus X] BAE66615.1 replic... 85 3e-13
AEM23890.1 replicase protein [Nerine virus X] 85 3e-13
YP_009268715.1 polyprotein [Rhizoctonia solani flexivirus 1] ANR... 83 1e-12
AQM49933.1 replicase [Agaricus bisporus virus 9] 81 5e-12
YP_009337794.1 hypothetical protein [Hubei macula-like virus 2] ... 78 4e-11
APG31855.1 RdRp [Arachis pintoi virus] 77 5e-11
YP_009328892.1 RdRp [Arachis pintoi virus] APG31850.1 RdRp [Arac... 77 7e-11
YP_009186834.1 RNA-dependent RNA polymerase [Actinidia virus X] ... 77 7e-11
YP_001715612.1 RNA dependent RNA polymerase [Asparagus virus 3] ... 74 5e-10
AAP51012.1 186K protein [Narcissus mosaic virus strain New Zealand] 74 6e-10
NP_040778.1 replicase [Narcissus mosaic virus] P15095.1 RecName:... 73 1e-09
ALM62223.1 RNA-dependent RNA polymerase [Soybean leaf-associated... 73 2e-09
AKH39765.1 Replicase [Donkey orchid symptomless virus] 72 2e-09
YP_008828152.1 Replicase [Donkey orchid symptomless virus] AHA56... 72 2e-09
AGO03686.1 RNA dependent RNA polymerase, partial [Actinidia viru... 72 2e-09
NP_570726.1 RNA polymerase [Asparagus virus 3] CAC87086.1 RNA po... 72 3e-09
YP_667844.1 ORF 1 [Malva mosaic virus] ABG48660.1 ORF 1 [Malva m... 71 4e-09
AHB59866.1 replicase [Narcissus mosaic virus] 71 4e-09
>YP_009268710.1 replication-associated polyprotein [Fusarium graminearum
deltaflexivirus 1] ANS13830.1 replication-associated
polyprotein [Fusarium graminearum deltaflexivirus 1]
Length = 2042
Score = 104 bits (259), Expect = 2e-19
Identities = 97/374 (25%), Positives = 145/374 (38%), Gaps = 23/374 (6%)
Frame = +1
Query: 550 FFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPHA 729
FF S + L+ H+ Y A R++PY VP L G++LP P AP H
Sbjct: 168 FFDDSALKTTALSLHMRHYNLAMSAAHRASPYAVPKHMHSFLIDAGIDLPVPHAPAHAHP 227
Query: 730 LHKSIEEHQLARMAVYLPENGYGLISVKQSKLHLLPK-----PASIQNPVHQAKDVSRYP 894
+H + E L+ + L Y L +K K++ L P NP ++ KD+SRY
Sbjct: 228 VHYAFENRSLSTVIPMLKGKWYALF-LKTPKVNYLTSGGATPPVGTFNPRYEGKDISRYA 286
Query: 895 GSGITSASFVGHD--LFFMHDVSSEVGPHELVERLARENSNAHAFITGLNPIEVIDRAGS 1068
G+ + S D ++FMHD + P + R + T + P E +
Sbjct: 287 GTDVPSEKRPTSDAPVWFMHDTLHHLSPTTVGSWFDRNPKLQYLVATCVIPPETYWDLPT 346
Query: 1069 FEPASHEIDYDLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRASTGDVYQVVLLDYKL 1248
P + D Y+ G ++ Y P WL TSSI V L+
Sbjct: 347 LRPKLYTYTVDKDVLTYIPEGDQAGHYIQPYSAR-RWLGTSSIITPRNHCVHVALVSSNC 405
Query: 1249 GHCIWHIFRGDVPPQDVRTFPTGSYVRIPAVL--TGTWRDEWLPVKLLTAVLSFTDRTPD 1422
H ++ + R +V PQ R IP ++ G+ D LLT ++++ R
Sbjct: 406 AHHVFVLSRPEVIPQRTRVLDMAPVTMIPWMVHPLGSLFDRITSPNLLTTLVNYATRVSA 465
Query: 1423 LSVRNIAAKVA--------QLATSVTPRVTSKEMWVAQYLARERAPVQTWWSVLNRGFWR 1578
+ R++ AKVA S MWV L A + WWS L R
Sbjct: 466 TNQRDLYAKVASHQAEVYGHFPQSYVRAAVLYAMWVR--LLDYHASL-GWWSFLTMNLTR 522
Query: 1579 ------VAYAFTLQ 1602
V +A+T Q
Sbjct: 523 LTRLPLVPFAWTWQ 536
>AQM49922.1 replicase [Agaricus bisporus virus 7]
Length = 1970
Score = 85.5 bits (210), Expect = 2e-13
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Frame = +1
Query: 547 DFFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPH 726
+ F SPQ +AVL+ ++ Y A PYNV L G+ P +P PH
Sbjct: 169 EMFTDSPQRNAVLSPNVDRYLVALRNAVTQCPYNVTGRMRRFLVRAGISEPAEFSPNHPH 228
Query: 727 ALHKSIEEHQLARMAVYLPENGYGL--ISVKQSKLHLLPKPASIQNPVHQAKDVSRYPGS 900
+H ++E L+ + L NGY + + +KL +PA + NP+ AKD +RY +
Sbjct: 229 PVHVALETQMLSFVRGML--NGYNWFGLFINPNKLSGWQEPAGLYNPLVTAKDFNRYKDT 286
Query: 901 GITSASFVGHD--LFFMHDVSSEVGPHELVERLARENSNAHAFITGLNPIEVIDRAGSFE 1074
+ + F G + ++FMHD E+ S H T + P E + R GS
Sbjct: 287 -LATQKFTGSNARVWFMHDALQYFSASEIGGWFDEYPSLDHLICTIVAPTETLHRIGSAY 345
Query: 1075 PASHEIDYDLGGFNYVFTGSESESYFTPI 1161
P +++ Y F Y G S +Y+ PI
Sbjct: 346 PDLYKLRYKGRSFQYTPEGDSSGAYWQPI 374
>YP_446992.1 replicase protein [Nerine virus X] BAE66615.1 replicase protein
[Nerine virus X]
Length = 1504
Score = 84.7 bits (208), Expect = 3e-13
Identities = 83/325 (25%), Positives = 145/325 (44%), Gaps = 12/325 (3%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEA-PHALHKSIEEHQLARMAVYLPENGYGLISVKQ 816
P+ + ++ L LG+ + P A + H K+IE L+ + LP+ + +K+
Sbjct: 40 PFAIDDAAADSLESLGI-ITNPYAVKLHTHGAVKAIENQMLSIVGHNLPKRPVTYMFLKK 98
Query: 817 SKLHLLPKPASI----QNPVHQAKDVSRYPGSGITSA-SFVGHDLFFMHDVSSEVGPHEL 981
SKL L + I QN + +DV+RYP + + V D+ ++ D + P L
Sbjct: 99 SKLRYLRRDPRISDVFQNYEIEPRDVARYPPETVLKRFTVVNTDVAYISDTLHFLRPTFL 158
Query: 982 VERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPI 1161
R ++ + T + P E + + S EP ++I+Y GF Y+ G +
Sbjct: 159 TALFERSHNLQTLYATMVLPPEALHKLPSLEPNLYQINYSFDGFQYI-PGRHGGGAYHHE 217
Query: 1162 DVTVSWLRTSSIRASTGDVYQVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYVRIPAV 1341
+ WLR I+ T + +L H ++ RGD+ VRTF +V +P +
Sbjct: 218 FKDLQWLRVGKIKGPTTTITCQLLESMGANH-LFVFRRGDLLTPRVRTFRCDEHVTLPQI 276
Query: 1342 LTGTWRDEWLPVK--LLTAVLSFTDRTPDLSVRNIAAKVAQLA-TSVTPRVTSKE-MWVA 1509
T R+ P+K L +L + + DL ++++ AKV QL T+ P++ E + +A
Sbjct: 277 FHPTNRNASRPIKHTLAAQLLLYCESIADLKLKDVFAKVRQLVKTNDLPQLQPTEIVHIA 336
Query: 1510 Q--YLARERAPVQTWWSVLNRGFWR 1578
Y V T+ VL+ +R
Sbjct: 337 NYFYFVGHLGAVNTYEDVLSMSLFR 361
>AEM23890.1 replicase protein [Nerine virus X]
Length = 1504
Score = 84.7 bits (208), Expect = 3e-13
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 12/325 (3%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEA-PHALHKSIEEHQLARMAVYLPENGYGLISVKQ 816
P+ + ++ L LG+ + P A + H K+IE L+ + LP+ + +K+
Sbjct: 40 PFAIDDAAADSLESLGI-ITNPYAVKLHTHGAVKAIENQMLSIVGHNLPKRPVTYMFLKK 98
Query: 817 SKLHLLPKPASI----QNPVHQAKDVSRYPGSGITSA-SFVGHDLFFMHDVSSEVGPHEL 981
SKL L + I QN + +DV+RYP + + V D+ ++ D + P L
Sbjct: 99 SKLRYLRRDPRISDVFQNYEIEPRDVARYPPETVLKRFTVVNTDVAYISDTLHFLRPTFL 158
Query: 982 VERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPI 1161
R ++ + T + P E + + S EP ++I+Y+ GF Y+ G +
Sbjct: 159 TALFERSHNLQTLYATMVLPPEALHKLPSLEPNLYQINYNFDGFQYI-PGRHGGGAYHHE 217
Query: 1162 DVTVSWLRTSSIRASTGDVYQVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYVRIPAV 1341
+ WLR I+ T + +L H ++ RGD+ VRTF +V +P +
Sbjct: 218 FKDLQWLRVGKIKGPTTTITCQLLESMGANH-LFVFRRGDLLTPRVRTFRCDEHVTLPQI 276
Query: 1342 LTGTWRDEWLPVK--LLTAVLSFTDRTPDLSVRNIAAKVAQLA-TSVTPRVTSKE-MWVA 1509
T R+ P+K L +L + + DL ++++ AKV QL T+ P++ E + +A
Sbjct: 277 FHPTNRNASRPIKHTLAAQLLLYCESIADLKLKDVFAKVRQLVKTNDLPQLQPTEIVHIA 336
Query: 1510 Q--YLARERAPVQTWWSVLNRGFWR 1578
Y V T+ +L+ +R
Sbjct: 337 NYFYFVGHLGAVNTYEDILSMSLFR 361
>YP_009268715.1 polyprotein [Rhizoctonia solani flexivirus 1] ANR02706.1 polyprotein
[Rhizoctonia solani flexivirus 1]
Length = 3477
Score = 82.8 bits (203), Expect = 1e-12
Identities = 77/314 (24%), Positives = 123/314 (39%), Gaps = 8/314 (2%)
Frame = +1
Query: 547 DFFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPH 726
+FF SP ++ L H+ DY A ++P+ ++ G P +P H
Sbjct: 1219 EFFSSSPHRNSALAVHVRDYIASHRNAHYASPHPHKPINEALMNEYGFPPAPPFSPTVAH 1278
Query: 727 ALHKSIEEHQLARMAVYLPENGYGLISVKQSKLHLL--PKPASIQNPVHQAKDVSRYPGS 900
H ++E L+ + L + + ++Q K+ L+ PA NP AKD RY G+
Sbjct: 1279 PSHVALERASLSYLRPILSSCEWFGLFLRQEKIDLVGFRPPAGQYNPNCMAKDYRRYFGA 1338
Query: 901 -GITSASFVGHDLFFMHDVSSEVGPHELVERLARENSNAHAFITGLNPIEVIDRAGSFEP 1077
++F+HD + P + H F T + P+E + R S P
Sbjct: 1339 EQAPPTPRSTAPVWFIHDAIMYLEPRIIGGWFDENPELNHCFATAVAPVEALQRDVSHWP 1398
Query: 1078 ASHEIDYDLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRASTGDVYQVVLLDYKLGHC 1257
+++ Y Y S Y PI + W T+ I G V + + H
Sbjct: 1399 TLYQLAYRGNDLIYTPENDGSGYYSQPISAS-RWPVTNEIVTPGGLRLSVAICQSRFAHH 1457
Query: 1258 IWHIFRGDVPPQDVRTFPTGSYVRI-----PAVLTGTWRDEWLPVKLLTAVLSFTDRTPD 1422
+ I R + P R F T +V I P L+ R +LL AV + R
Sbjct: 1458 VLLITRATLVPDTNRAFDTPGFVHIPFAAHPFALSAGRRTR---ARLLNAVTEYAFRVST 1514
Query: 1423 LSVRNIAAKVAQLA 1464
S+R++ K+AQ A
Sbjct: 1515 TSLRDLYNKIAQAA 1528
>AQM49933.1 replicase [Agaricus bisporus virus 9]
Length = 2150
Score = 80.9 bits (198), Expect = 5e-12
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 8/271 (2%)
Frame = +1
Query: 547 DFFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPH 726
DFF + + V+ H+ Y + E A+RS P++VP S L L G++ P P AP H
Sbjct: 137 DFFYDTAHRNVVMGFHVPGYQRLVELARRSCPWHVPASMLRYLHSAGLQSPPPHAPIHQH 196
Query: 727 ALHKSIEEHQLARMAVYLPENGYGLISVKQSKLHL--LPKPASIQNPVHQAKDVSRY--- 891
+H ++++H L + L E + + +K+ + LP P NP KD+ RY
Sbjct: 197 PVHAALDQHVLRFVRPLLKEGRWTALFLKKERAEEAGLPPPDKYINPTLVGKDIMRYQST 256
Query: 892 PGSGITSASFVGHDLFFMHDVSSEVGPHELVERLARENSNAHAFI-TGLNPIEVIDRAGS 1068
P + T+ + ++ H V V P E + EN A I T + P E++
Sbjct: 257 PLNPFTTPRSLS-PVWLCHTVLQHVTPSE-IGSWFDENPTLQALIATAVIPPELLFGLPP 314
Query: 1069 FEPASHEIDYDLGGFNYVFT--GSESESYFTPIDVTVSWLRTSSIRASTGDVYQVVLLDY 1242
P + DL G +++T G +Y P V WLR + + V ++
Sbjct: 315 TSPDLYTFS-DLPGDQFLYTPEGDRHGAYVQP-KHAVQWLRANRLITPANTCLHVSMITS 372
Query: 1243 KLGHCIWHIFRGDVPPQDVRTFPTGSYVRIP 1335
H ++ I R + + R+F G + +P
Sbjct: 373 AHAHHVFAITRKQLIAETHRSFDMGDVLVVP 403
>YP_009337794.1 hypothetical protein [Hubei macula-like virus 2] APG77677.1
hypothetical protein [Hubei macula-like virus 2]
Length = 1626
Score = 77.8 bits (190), Expect = 4e-11
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 4/257 (1%)
Frame = +1
Query: 502 SLMQNHIRIGDTFGRDFFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAP 681
SL N + +T +D H + N H + + P+++ + Q+ +L
Sbjct: 3 SLSNNMQILSNTLHKDASTHPLLTHTLKNLHT---------SLHAFPWSLTSEQVELLVN 53
Query: 682 LGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQSKLHLL----PKPAS 849
LG+ + PH +HK IE H L +L + +K SK L P
Sbjct: 54 LGINVSPHGTLPHPHPVHKCIETHVLFNHWNHLAVQPSAVCFMKPSKFAKLSNSNPNFIE 113
Query: 850 IQNPVHQAKDVSRYPGSGITSASFVGHDLFFMHDVSSEVGPHELVERLARENSNAHAFIT 1029
+ N + A+D +RYP S+S F+HD + P+E+++ + + H F T
Sbjct: 114 LHNYIIDARDPTRYPS---ISSSLPTTPYLFIHDALMFISPNEIIDLFSNCPNLTHVFGT 170
Query: 1030 GLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRAST 1209
+ P E I SF P + ++ G +Y G+ S Y P D + WL T +I
Sbjct: 171 LVLPAESIHNIPSFYPDIYTYHHENGNLHYFLEGNPSPHYTQPKDAAI-WLTTHTINGPN 229
Query: 1210 GDVYQVVLLDYKLGHCI 1260
+ V+L + H I
Sbjct: 230 FSLSVVILESWLSVHSI 246
>APG31855.1 RdRp [Arachis pintoi virus]
Length = 1392
Score = 77.4 bits (189), Expect = 5e-11
Identities = 76/297 (25%), Positives = 121/297 (40%), Gaps = 17/297 (5%)
Frame = +1
Query: 622 RAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGL 801
+AQR P+ V + + L LG+ HA K IE L+ + YLP+ +
Sbjct: 35 KAQRVAPFAVTDQEALTLERLGITTSPFATTSHTHAGDKIIENDCLSLIGSYLPKTAVTM 94
Query: 802 ISVKQSKLHLL---PKPASIQNPVHQAKDVSRYPGSGITSASFVGHDLFFMHDVSSEVGP 972
I +K+SK+HL+ P N H+ KDV RY + S V + + D +
Sbjct: 95 IQLKRSKIHLMNRGPNQDVFANYCHEPKDVLRYGITNPGSCPRVHTEYAVLADTLHFMST 154
Query: 973 HELVERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYF 1152
+L+ + F T + PIE + R S P + ++Y F Y+ G +Y
Sbjct: 155 KQLLALFLKNPKLQKLFATLVLPIEALHRLPSLFPEIYRLEYYKEHFAYMPGGHGGGAYV 214
Query: 1153 TPIDVTVSWLRTSSIRASTGDVYQVVLLDY--------KLGHCIWHIFRGDV----PPQD 1296
T++WL T + T +V V DY K H + I R P
Sbjct: 215 HSY-ATLNWLSTGQVGTHTNNVISVGYPDYLSLEKIETKAAHHVMLIQRRRTNVPWPVSP 273
Query: 1297 VRTFPTGSYVRIPAVLTGTWRD--EWLPVKLLTAVLSFTDRTPDLSVRNIAAKVAQL 1461
+ F YVR+P V + P L+ + ++ +S+R+I AK+ Q+
Sbjct: 274 LWVFHASDYVRLPQVYYPPEANVQNTYPHDLIKRMQAYCLSVKAVSLRDIFAKLRQV 330
>YP_009328892.1 RdRp [Arachis pintoi virus] APG31850.1 RdRp [Arachis pintoi virus]
Length = 1392
Score = 77.0 bits (188), Expect = 7e-11
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 17/297 (5%)
Frame = +1
Query: 622 RAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGL 801
+AQR P+ V + + L LG+ HA K IE L+ + YLP+ +
Sbjct: 35 KAQRVAPFAVTDQEALTLERLGITTSPFATTSHTHAGDKIIENDCLSLIGSYLPKAAVTM 94
Query: 802 ISVKQSKLHLL---PKPASIQNPVHQAKDVSRYPGSGITSASFVGHDLFFMHDVSSEVGP 972
I +K+SK+HL+ P N H+ KDV RY + + V + + D +
Sbjct: 95 IQLKRSKIHLMNRGPNQDVFANYCHEPKDVLRYGITNPGACPRVHTEYAVLADTLHFMST 154
Query: 973 HELVERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYF 1152
+L+ + F T + PIE + R S P + ++Y F Y+ G +Y
Sbjct: 155 KQLLTLFLKNPKLQRLFATLVLPIEALHRLPSLFPEIYRLEYYKEHFAYMPGGHGGGAYV 214
Query: 1153 TPIDVTVSWLRTSSIRASTGDVYQVVLLDY--------KLGHCIWHIFRGDV----PPQD 1296
T++WL T + T +V V DY K H + I R V P
Sbjct: 215 HSY-ATLNWLSTGQVGTHTNNVLSVGYPDYLSLEKIETKAAHHVMLIQRRRVNVPWPVAP 273
Query: 1297 VRTFPTGSYVRIPAVLTGTWRD--EWLPVKLLTAVLSFTDRTPDLSVRNIAAKVAQL 1461
+ F YVR+P V + P L+ + ++ +S+R+I AK+ Q+
Sbjct: 274 LWVFHASDYVRLPQVYYPPEANVQNTYPHDLIKRMQAYCLSVKAVSLRDIFAKLRQV 330
>YP_009186834.1 RNA-dependent RNA polymerase [Actinidia virus X] ALQ43526.1
RNA-dependent RNA polymerase [Actinidia virus X]
Length = 1591
Score = 77.0 bits (188), Expect = 7e-11
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 15/289 (5%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + +++ L LG+ + HA K+IE L + +LP+ ++ +K+S
Sbjct: 40 PYALTDAEADSLENLGITINPSATQTHTHAACKAIENRMLEVVGSHLPKEACTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGITS-ASFVGHDLFFMHDVSSEVGPHELV 984
KL + + A+++ N + KD+ RY I S + H + ++ D + ELV
Sbjct: 100 KLRYMRRAAALKDTFVNKDVEPKDLFRYDSDTIRSKLQGIEHSIAYISDTLHFMSRQELV 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ + T + P+E + R + P + ++Y GF Y+ +YF P
Sbjct: 160 QLFVDSPNLETLLATVVLPVEALHRRTTLYPTLYSVNYSAKGFEYIPGNHGGGAYFHPYS 219
Query: 1165 VTVSWLRTSSIRASTGDVYQV---VLLDYKLGHCIW--HIF---RGDVPPQDVRTFPTGS 1320
T+ WL+ I A D Y + + L +++ + H+F R D+ +RTF S
Sbjct: 220 -TLEWLKVRQIHAY--DYYALDPQITLTFQMVESLGANHLFIIRRADMKTPAMRTFCRDS 276
Query: 1321 YVRIPAVLTGTWRDEWLPV--KLLTAVLSFTDRTPDLSVRNIAAKVAQL 1461
V +P V + P+ K ++ + ++ R+I AK+ QL
Sbjct: 277 LVTLPKVFCPDSMNANRPLEKKRAMQLMLYCKSVKQVTERDIYAKIRQL 325
>YP_001715612.1 RNA dependent RNA polymerase [Asparagus virus 3] BAG12158.1 RNA
dependent RNA polymerase [Asparagus virus 3]
Length = 1614
Score = 74.3 bits (181), Expect = 5e-10
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 15/292 (5%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + +++ L G+ + HA K+IE L + +LP+ ++ +K+S
Sbjct: 40 PYALTDAEADCLENFGITVNPYATQTHTHAACKAIENRLLEIVGKHLPKERCTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGI-TSASFVGHDLFFMHDVSSEVGPHELV 984
KL L + A+++ N + KD+ RY I T + + +M D + EL+
Sbjct: 100 KLRYLRRAAALKDDFINQDVEPKDLFRYDRDTIRTRLKDINTPIAYMSDTLHFMSHSELI 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
A T + PIE + R + PA + I+Y GF Y+ +YF P D
Sbjct: 160 HIFADSPKLQTMLATVVLPIEAVHRRSALYPALYSINYGPKGFEYIPGNHGGGAYFHPYD 219
Query: 1165 VTVSWLRTSSIRASTGDVYQV---VLLDYKLGHCIW--HIF---RGDVPPQDVRTFPTGS 1320
T+ WL+ ++ D Y + + L ++L + H+F RGD+ +RTF +
Sbjct: 220 -TLDWLKVRQLQGK--DYYGIDTDLTLTFQLVESLGANHLFIIQRGDLRTPLMRTFCRNA 276
Query: 1321 YVRIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQLATS 1470
V +P + + P+ A +L + +S R+I AK Q+ ++
Sbjct: 277 LVTMPKIFCPESMNANRPLTKTKAMQMLMYCKSVKQVSERDIYAKFRQIIST 328
>AAP51012.1 186K protein [Narcissus mosaic virus strain New Zealand]
Length = 1643
Score = 73.9 bits (180), Expect = 6e-10
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 13/287 (4%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + N + L G+ + HA K IE L + ++LP++ ++ +K+S
Sbjct: 40 PYALSNDEADCLESFGITVNPYANQTHTHAACKVIENRMLEIVGMHLPKHSCTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGITS-ASFVGHDLFFMHDVSSEVGPHELV 984
KL + + A+++ N + KD+ RY I S + + +M D + E+V
Sbjct: 100 KLRYMRRAAALKDVFLNKDVEPKDLFRYDRDTIRSRLQDIDTKIAYMSDTLHFMSRREIV 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ T + P+E + + S P+ + I+Y GF Y+ SYF P
Sbjct: 160 QLFEDSPKLETLLATVVLPVEALHKRTSLYPSLYSINYSAKGFEYIPGNHGGGSYFHPY- 218
Query: 1165 VTVSWLRTSSIRA------STGDVYQVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYV 1326
T+ WL+ I A STG + L++ + ++ + + + +RTF S V
Sbjct: 219 TTLEWLKVRMINAEDFHKLSTGFILTFQLVESLGANHLFIVQKAKLLTPQMRTFCRDSLV 278
Query: 1327 RIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQL 1461
+P V + P+ A +L + ++ R+I AK+ Q+
Sbjct: 279 TLPQVFCPAAMNANRPLSKTKAMQMLLYCKSVKQVTERDIYAKIRQI 325
>NP_040778.1 replicase [Narcissus mosaic virus] P15095.1 RecName: Full=RNA
replication protein; AltName: Full=186 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase BAA02891.1 186K protein [Narcissus mosaic
virus]
Length = 1643
Score = 72.8 bits (177), Expect = 1e-09
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 13/287 (4%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + N + L G+ + HA K IE L + ++LP++ ++ +K+S
Sbjct: 40 PYALSNDEADCLESFGITVNPYANQTHTHAACKVIENRMLEIVGMHLPKHSCTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGITS-ASFVGHDLFFMHDVSSEVGPHELV 984
KL + + A ++ N + KD+ RY I S + + +M D + E+V
Sbjct: 100 KLRYMRRAAILKDVFLNKDVEPKDLFRYDRDTIRSRLQDIDTKIAYMSDTLHFMSRREIV 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ T + P+E + + S P+ + I+Y GF Y+ SYF P
Sbjct: 160 QLFEDSPKLETLLATVVLPVEALHKRTSLYPSLYSINYSAKGFEYIPGNHGGGSYFHPY- 218
Query: 1165 VTVSWLRTSSIRA------STGDVYQVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYV 1326
T+ WL+ I A STG + L++ + ++ + + + +RTF S V
Sbjct: 219 TTLEWLKVRMINAEDFHKLSTGFILTFQLVESLGANHLFIVQKAKLLTPQMRTFCRDSLV 278
Query: 1327 RIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQL 1461
+P V + P+ A +L + ++ R+I AK+ Q+
Sbjct: 279 TLPQVFCPAAMNANRPLSKTKAMQMLLYCKSVKQVTERDIYAKIRQI 325
>ALM62223.1 RNA-dependent RNA polymerase [Soybean leaf-associated mycoflexivirus
1]
Length = 2084
Score = 72.8 bits (177), Expect = 2e-09
Identities = 78/368 (21%), Positives = 141/368 (38%), Gaps = 17/368 (4%)
Frame = +1
Query: 547 DFFRGSPQEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGMELPQPDAPEAPH 726
+F+ SP + +L+ H+ Y KG A++ PY+VP +L G+ P P A H
Sbjct: 176 NFYADSPLKSVILSMHMGAYGKGLASARQQCPYDVPTKLRPLLREAGISDPPPHAEPHSH 235
Query: 727 ALHKSIEEHQLARMAVYLPENGYGLISVKQSKLHL----LPKPASIQNPVHQAKDVSRYP 894
+H ++ +A A L Y L + +L P+ + +P ++ KD++RY
Sbjct: 236 PVHYALRNKYMAMAAKSLQGQWYALFAGADRINYLRSCGASAPSGVFSPRYEGKDITRYK 295
Query: 895 GSGI-----------TSASFVGHDLFFMHDVSSEVGPHELVERLARENSNAHAFITGLNP 1041
G + +S S V + +H +S+ V + + + + T + P
Sbjct: 296 GQPVPTEGGLPQLEPSSLSPVWYVCDTLHHLSASV----VGSWFDKNPTLEYVVATTIIP 351
Query: 1042 IEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRASTGDVY 1221
E + S A + Y+ G +Y P+ WLRT ++
Sbjct: 352 PETLWGLPSLTRALYSYTIKGDTLTYIPEGHVGSAYVQPVSGN-RWLRTDALITPRNSCV 410
Query: 1222 QVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYVRIPAVL--TGTWRDEWLPVKLLTAV 1395
V LL H + I R + PQ R + +P + GT L A+
Sbjct: 411 HVSLLSQDFAHQLIVISRAPLLPQKSRLMGLRNVSVVPWFIHPMGTLYQRLTSPGLNRAL 470
Query: 1396 LSFTDRTPDLSVRNIAAKVAQLATSVTPRVTSKEMWVAQYLARERAPVQTWWSVLNRGFW 1575
++ R S+R+I +K ++ R + + A+ + + + GF
Sbjct: 471 QTYITRVGSTSIRDIYSKSTATEVAIFERYPTSFVRAGALYAKWIRDID--YHSASSGFT 528
Query: 1576 RVAYAFTL 1599
V + FT+
Sbjct: 529 YVRWVFTM 536
>AKH39765.1 Replicase [Donkey orchid symptomless virus]
Length = 1395
Score = 72.4 bits (176), Expect = 2e-09
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Frame = +1
Query: 568 QEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGME-LPQPDAPEAP-HALHKS 741
Q+ + R+ +Y + +++ PY ++ + IL LG+ LP+ +A + H +K+
Sbjct: 14 QQAILQTRYRAEYDEAVRETRKTNPYYFDDASVAILTELGIPTLPRHEATQLHRHGKNKA 73
Query: 742 IEEHQLARMAVYLPENGYGLISVKQSKLHLLPKPA----SIQNPVHQAKDVSRYPGSGIT 909
IE H L + L +K +KL L + NP AKD+ R+P +
Sbjct: 74 IETHLLCSLRGKL-RGPCSFCFLKPAKLQHLGYDTHTAHEVLNPHLTAKDLYRFPEATAP 132
Query: 910 SASFV-GHDLFFMHDVSSEVGPHELVERLARENSNAHAFITGLNPIEVIDRAGSFEPASH 1086
F H + F+ D P +++ + T + PIE++ + SF P +
Sbjct: 133 DNIFTFKHPVAFVQDALHYYSPGLVLDIFEHNPGLRELYATLVIPIEIMHKHASFHPGLY 192
Query: 1087 EIDY-DLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRASTGDV-YQVVLLDYKLGHCI 1260
I+Y D F+Y+ S + +Y ++ +SWL+ SS + G V LL+ H +
Sbjct: 193 TIEYHDDDEFSYIPESSAAGAYTQNLN-CLSWLKYSSF--ARGQVRVSSTLLETLGAHHL 249
Query: 1261 WHIFRGDVPPQDVRTFPTGSYVRIPAV 1341
H RGD PQ R F V++P V
Sbjct: 250 LHFVRGDFLPQKRRLFQHPPLVKLPPV 276
>YP_008828152.1 Replicase [Donkey orchid symptomless virus] AHA56694.1 Replicase
[Donkey orchid symptomless virus]
Length = 1396
Score = 72.4 bits (176), Expect = 2e-09
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 10/307 (3%)
Frame = +1
Query: 568 QEHAVLNRHLLDYFKGRERAQRSTPYNVPNSQLHILAPLGME-LPQPDAPEAP-HALHKS 741
Q+ + R+ +Y +++ PY ++ L LG+ LP+ +A + H +K+
Sbjct: 14 QQAILQTRYRAEYDNAVNETRKTNPYYFDDASAEFLTGLGIPALPRHEATQLHRHGKNKA 73
Query: 742 IEEHQLARMAVYLPENGYGLISVKQSKLHLL---PKPA-SIQNPVHQAKDVSRYPGSGIT 909
IE H LA + L K +KL LL P+ A NP AKD+ R+P I
Sbjct: 74 IENHLLANLKHKL-SGPCSFCFFKPAKLQLLGYNPRTAHEFLNPHITAKDLYRFPEDNIV 132
Query: 910 SASF-VGHDLFFMHDVSSEVGPHELVERLARENSNAHAFITGLNPIEVIDRAGSFEPASH 1086
+ F + F+ D P ++ + T + P+E++ + SF P+ +
Sbjct: 133 ADVFKFNYPTAFVQDALHYYSPGIILNIFEGNPGLRELYATVVIPVEIMHKHASFHPSLY 192
Query: 1087 EIDY-DLGGFNYVFTGSESESYFTPIDVTVSWLRTSSIRASTGDVYQVVLLDYKLGHCIW 1263
I+Y D F+Y+ S + +Y + ++WL+ S+ V LL+ H +
Sbjct: 193 TIEYHDDDEFSYIPESSAAGAYTQGL-ACLNWLKYSNFSRGETKV-SSTLLETLGAHHVL 250
Query: 1264 HIFRGDVPPQDVRTFPTGSYVRIPAV-LTGTWRD-EWLPVKLLTAVLSFTDRTPDLSVRN 1437
H RG+ PQ R F V++P V G + + P L+ +L + ++ +
Sbjct: 251 HFVRGEFLPQKRRLFQHPPLVKLPPVYCVGRFNSHKPFPKTLVQVLLLYAHTLKEIRDVD 310
Query: 1438 IAAKVAQ 1458
I AK+ Q
Sbjct: 311 IWAKLRQ 317
>AGO03686.1 RNA dependent RNA polymerase, partial [Actinidia virus X]
Length = 1607
Score = 72.0 bits (175), Expect = 2e-09
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 13/247 (5%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + +++ L LG+ + HA K+IE L + +LP+ ++ +K+S
Sbjct: 21 PYALTDAEADSLENLGITINPSATQTHTHAACKAIENRMLEIVGSHLPKEACTMLFLKRS 80
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGITS-ASFVGHDLFFMHDVSSEVGPHELV 984
KL + + A+++ N + KD+ RY I S + H + ++ D + ELV
Sbjct: 81 KLRYMRRAAALKDTFVNKDVEPKDLFRYDSDTIRSKLQGIEHRIAYISDTLHFMSRQELV 140
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ + T + P+E + R + P + ++Y GF Y+ +YF P
Sbjct: 141 QLFVDSPNLETLLATVVLPVEALHRRTTLYPTLYSVNYSPKGFEYIPGNHGGGAYFHPYS 200
Query: 1165 VTVSWLRTSSIRASTGDVYQV---VLLDYKLGHCIW--HIF---RGDVPPQDVRTFPTGS 1320
T+ WL+ I A D Y + + L +++ + H+F R D+ +RTF S
Sbjct: 201 -TLEWLKVRQIHAY--DYYALDPQITLTFQMVESLGANHLFIIRRADMKTPAMRTFCRDS 257
Query: 1321 YVRIPAV 1341
V +P V
Sbjct: 258 LVTLPKV 264
>NP_570726.1 RNA polymerase [Asparagus virus 3] CAC87086.1 RNA polymerase
[Asparagus virus 3]
Length = 1631
Score = 71.6 bits (174), Expect = 3e-09
Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 13/290 (4%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + +++ L G+ + HA K+IE L + +LP+ ++ +K+S
Sbjct: 40 PYALNDAEADCLENFGITVNPYATQTHTHAACKAIENRMLEIVGKHLPKERCTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGI-TSASFVGHDLFFMHDVSSEVGPHELV 984
KL L + A+++ N + KD+ RY I T + + +M D + EL+
Sbjct: 100 KLRYLRRAAALKDDFINQDIEPKDLFRYDRDTIRTRLKDITTPIAYMSDTLHFMSHTELM 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
A T + PIE + R + PA + I+Y GF Y+ +YF P D
Sbjct: 160 LLFADSPPLQTMLATLVLPIEAMHRRTTLYPALYSINYGPKGFEYIPGNHGGGAYFHPYD 219
Query: 1165 VTVSWLRTSSIRAST-GDVYQVVLLDYKLGHCIW--HIF---RGDVPPQDVRTFPTGSYV 1326
T+ WL+ +R + + L ++L + H+F RGD+ VRTF + V
Sbjct: 220 -TLDWLKVRQLRGEDHHGIDPTITLTFQLVESLGANHLFIIQRGDLRTPLVRTFCRDTLV 278
Query: 1327 RIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQLATS 1470
+P + + P+ A +L + +S R+I AK Q+ ++
Sbjct: 279 TMPKIFCPDSMNANRPLTKTKAMQMLMYCKSVKQVSERDIYAKFRQMIST 328
>YP_667844.1 ORF 1 [Malva mosaic virus] ABG48660.1 ORF 1 [Malva mosaic virus]
Length = 1571
Score = 71.2 bits (173), Expect = 4e-09
Identities = 75/332 (22%), Positives = 139/332 (41%), Gaps = 19/332 (5%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + +++ L G+ + HA K+IE L + +LP+ ++ +K+S
Sbjct: 40 PYALTDAEADCLENFGITINPYATQTHTHAACKAIENRMLEIVGKHLPKEKVTMLFLKKS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGI-TSASFVGHDLFFMHDVSSEVGPHELV 984
KL L + A++ N + KD+ RY I S V L +M D + + +
Sbjct: 100 KLRYLRRAAALNDVFINKDMEPKDLFRYDRDTIRNSLQNVDTSLAYMSDTLHFMNFNSVA 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ T + P+E + R S PA + I+Y GF Y+ +YF P D
Sbjct: 160 QLFVDSPKLTTLLATVVLPVEALHRRSSLYPALYSINYHPQGFEYIPGNHGGGAYFHPYD 219
Query: 1165 VTVSWLRTSSIRASTGDVYQV---VLLDYKLGHCIW--HIF---RGDVPPQDVRTFPTGS 1320
T+ WL+ I A D Y + L +++ I H+F + D+ +RTF S
Sbjct: 220 -TLDWLKVRKILAK--DFYHLDEKFTLTFQMVESIGANHLFIIHKADMITPGMRTFCRDS 276
Query: 1321 YVRIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQLATSVTPRVTSK 1494
V +P + + P+ A ++ + ++ R+I AK Q+ ++ +
Sbjct: 277 LVTLPKIFCPDSMNANRPLSKTKAMQLMLYCKSVKQVTERDIYAKFRQIIPTIELELYEP 336
Query: 1495 E--MWVAQYL--ARERAPVQTWWSVLNRGFWR 1578
+ + + YL + + + ++ +L WR
Sbjct: 337 DEIIHLCNYLNFMTQLSSITSYEDLLGNSLWR 368
>AHB59866.1 replicase [Narcissus mosaic virus]
Length = 1630
Score = 71.2 bits (173), Expect = 4e-09
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 13/287 (4%)
Frame = +1
Query: 640 PYNVPNSQLHILAPLGMELPQPDAPEAPHALHKSIEEHQLARMAVYLPENGYGLISVKQS 819
PY + N + L G+ + HA K IE L + ++LP++ ++ +K+S
Sbjct: 40 PYALSNDEADCLESFGITVNPYANQTHTHAACKVIENRMLEIVGMHLPKHSCTMLFLKRS 99
Query: 820 KLHLLPKPASIQ----NPVHQAKDVSRYPGSGITS-ASFVGHDLFFMHDVSSEVGPHELV 984
KL + + A ++ N + KD+ RY I + + +M D + E+V
Sbjct: 100 KLRYMRRAAILKDVFLNKDVEPKDLFRYDRDTIRGRLQDIDTKIAYMSDTLHFMSRREIV 159
Query: 985 ERLARENSNAHAFITGLNPIEVIDRAGSFEPASHEIDYDLGGFNYVFTGSESESYFTPID 1164
+ T + P+E + + S P+ + I+Y GF Y+ SYF P
Sbjct: 160 QLFEDSPKLETLLATVVLPVEALHKRTSLYPSLYSINYSAKGFEYIPGNHGGGSYFHPY- 218
Query: 1165 VTVSWLRTSSIRA------STGDVYQVVLLDYKLGHCIWHIFRGDVPPQDVRTFPTGSYV 1326
T+ WL+ I+A STG + L++ + ++ + + + +RTF S V
Sbjct: 219 TTLEWLKVRMIKAEDFHRLSTGFILTFQLVESLGANHLFIVQKAKLLTPQMRTFCRDSLV 278
Query: 1327 RIPAVLTGTWRDEWLPVKLLTA--VLSFTDRTPDLSVRNIAAKVAQL 1461
+P + + P+ A +L + ++ R+I AK+ Q+
Sbjct: 279 TLPQIFFPAAMNANRPLSKTKAMQMLLYCKSVKQVTERDIYAKIRQI 325