BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00008223
         (4717 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010265589.1 PREDICTED: DNA-directed RNA polymerase III subuni...  2036   0.0  
XP_010907843.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1966   0.0  
XP_018682186.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1964   0.0  
JAT40403.1 DNA-directed RNA polymerase III subunit RPC1 [Anthuri...  1932   0.0  
XP_002284657.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1917   0.0  
XP_015636431.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1902   0.0  
XP_020113843.1 DNA-directed RNA polymerase III subunit 1 isoform...  1897   0.0  
XP_020113845.1 DNA-directed RNA polymerase III subunit 1 isoform...  1897   0.0  
XP_020113844.1 DNA-directed RNA polymerase III subunit 1 isoform...  1896   0.0  
XP_006653556.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1873   0.0  
XP_006828249.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1872   0.0  
XP_011627269.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1869   0.0  
XP_002446717.1 hypothetical protein SORBIDRAFT_06g021120 [Sorghu...  1865   0.0  
XP_008669237.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1864   0.0  
XP_004976057.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1855   0.0  
KQK97866.1 hypothetical protein SETIT_009186mg [Setaria italica]     1853   0.0  
ONM16376.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]      1851   0.0  
ONM16381.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]      1851   0.0  
OAY83936.1 DNA-directed RNA polymerase III subunit 1 [Ananas com...  1843   0.0  
XP_009800353.1 PREDICTED: DNA-directed RNA polymerase III subuni...  1834   0.0  

>XP_010265589.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 2036 bits (5274), Expect = 0.0
 Identities = 1026/1397 (73%), Positives = 1172/1397 (83%), Gaps = 19/1397 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A   ++ LFTKEP+IEDVGP++IKSIRFSM SG EI  AAEVQV++S +YD  +KPI  G
Sbjct: 2    ANTQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNRKPIDDG 61

Query: 372  LLDSHMGPL-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLDS MGP  K G C TC GSFTDCPGHFGY  L LPVFNVGYFSTI+DILKCICKSCAR
Sbjct: 62   LLDSRMGPASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSCAR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKC-------KASRCFHCGYINGAVKK 707
            ILL E+ RK +LKKMRS   D LQKN   K++V+KC       KA +C  CGYING VKK
Sbjct: 122  ILLEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFVKK 181

Query: 708  A------GSILAVAHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKM 869
                   GS L + HD SKV + + +EC SAISH KE+ A+F +V+VL PV++LALFK+M
Sbjct: 182  GASISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESKASFRVVHVLNPVRILALFKRM 241

Query: 870  LDEDCELLHLYDRPEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKL 1049
            +DEDCELL+LYDRPEKLI+TDIAVPP+AIRPSVFMDAG MSNEDDITSKL+ +I+A+A L
Sbjct: 242  VDEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANAPL 301

Query: 1050 QEDLQSAEPPSLSLGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFR 1229
            ++DLQ A P S  L  W+ LQ+EVA YINS+VRG+P  MQP KPLRG +QRLKGKQGRFR
Sbjct: 302  RQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFVQRLKGKQGRFR 361

Query: 1230 GNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQ 1409
            GNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA++LTYPERVS++N+EKLRQC+RNG Q
Sbjct: 362  GNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEKLRQCVRNGSQ 421

Query: 1410 KYPGANYVITPDGSKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIM 1589
            KYPGAN++  PDGS +NL +  RKR +DELKYGYIVERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 422  KYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMSIM 481

Query: 1590 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 1769
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 482  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 541

Query: 1770 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTG 1949
            G ILVASTQDFLTS+FLITRKDTFYDRAAFSLMCSYMGDGMDP+DLPTPALIKPIELWTG
Sbjct: 542  GAILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTG 601

Query: 1950 KQLFSVLIRPHARMRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATL 2129
            KQLFSVL+RPHA MRVYLNLT+ EKN    K K+TMCPNDG+VYFRNSEL+CGQLGKATL
Sbjct: 602  KQLFSVLVRPHAHMRVYLNLTVLEKNC--VKQKETMCPNDGFVYFRNSELICGQLGKATL 659

Query: 2130 GNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKV 2309
            GNGNKDGLFSVLLRDY AHAAASCMNR+AKLSARWIGNHGFSIGIDDVQPGE L   KK 
Sbjct: 660  GNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKE 719

Query: 2310 EIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRN 2489
             I+ GYK CD+LI+ YN G L+L PGC+AAQTLE+ IT KLN IRE  A VCM  LHWRN
Sbjct: 720  TIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRN 779

Query: 2490 SPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVA 2669
            SPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP  SKTPAAKGFVA
Sbjct: 780  SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVA 839

Query: 2670 NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSG 2849
            NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K+LEDL+ YYD+TVRN+SG
Sbjct: 840  NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASG 899

Query: 2850 GIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRL 3029
            G+VQ LYGDDG+DPANMEGK+G+PLNL+R+++KTKAT P +  + SL PSEI K  DDR+
Sbjct: 900  GVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCP-SGTNASLCPSEIVKILDDRI 958

Query: 3030 SKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDED---KVGEHVLENVAANIS 3200
            S++D+TP+GGCS+AFK+ L DF++  +  LR TR+ LGLDE+   K    +LE++AANIS
Sbjct: 959  SRYDMTPDGGCSSAFKKLLVDFIQNRISILRNTRKALGLDEEYAKKDNSDILEHIAANIS 1018

Query: 3201 GITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVT 3380
            GIT+QQL+V+LETCI RYHLKR+E          QSIGEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1019 GITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1078

Query: 3381 LGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPR 3560
            LGVPRI+EIIN  K I TPIITATL CD++V SARIVKG IEKT+LGEVAKS+K+    R
Sbjct: 1079 LGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIVMTQR 1138

Query: 3561 REFVSVKLDKAKIEDLQMKISAYTVAQSILQH--PKIKLKQQHIEILSPQKLKLFPPEAD 3734
            +  + + LD A+IE  Q+KISA +V +SIL+H  PK K K   I +    KL + P E+D
Sbjct: 1139 QASIVISLDMARIEAAQLKISADSVKESILKHLNPKFKPK---IVVDKGYKLIVIPTESD 1195

Query: 3735 KYTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDG 3914
            +  L F+L +LK +L  VIV+GI TV+RAVIN  K+  KYNLL+EGTNL  VMGTPGVDG
Sbjct: 1196 RSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKD-GKYNLLVEGTNLLGVMGTPGVDG 1254

Query: 3915 RKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGI 4094
             KT SNHIIE++ TLGIEAAR+CIIDEI+YTM  HGM IDIRHMMLLAD+MT+KG+VLGI
Sbjct: 1255 CKTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMDIDIRHMMLLADLMTYKGEVLGI 1314

Query: 4095 TNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVK 4274
            T  GI KMK+SVLMLASFEKT +HLFNAS+ GR D+IEGVSECII+GIPMQIGTGILKV 
Sbjct: 1315 TRTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIILGIPMQIGTGILKVI 1374

Query: 4275 QRDDPVQVYNRRPDLIM 4325
            QR   V   + +PD I+
Sbjct: 1375 QRYPQVPQLSYKPDPII 1391


>XP_010907843.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Elaeis
            guineensis]
          Length = 1369

 Score = 1966 bits (5092), Expect = 0.0
 Identities = 996/1378 (72%), Positives = 1138/1378 (82%), Gaps = 4/1378 (0%)
 Frame = +3

Query: 204  EKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQGLLDS 383
            EK   TKEP+IEDVGP++IKSIRFS  SG EI   AEVQV+ +  YD   KPI+ GLLD 
Sbjct: 3    EKLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLNLKPIENGLLDP 62

Query: 384  HMG-PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILLM 560
             MG P +   CATCHG+FTDCPGHFGY KLTLPVFNVGYF++I++ILKCICK C RILL 
Sbjct: 63   RMGAPNRQTECATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRILLD 122

Query: 561  EKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAVAHDL 740
            E  RK +LKKMR+P  D+ QKNA  K V +KCK SRC  CGY NG VKKA S L    D 
Sbjct: 123  ETLRKSYLKKMRNPKADIFQKNALMKMVRDKCKPSRCLRCGYANGVVKKARSGLYFIQDF 182

Query: 741  SKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRPEKL 920
            SK  + + +E RSA+SHTK+   +F + +VL+ V VL+LF+KMLDEDCELL+LYDRPEKL
Sbjct: 183  SKTADPSVEEFRSALSHTKD-KTSFQVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPEKL 241

Query: 921  IMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSLGLW 1100
            I+T IAVPPV+IRPSV +D+G  SNED+ITS L  +I  ++ L+EDL+ A PP   L  W
Sbjct: 242  IVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILREDLEGAAPPFKCLDCW 301

Query: 1101 EHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRTVIS 1280
             HLQ++V  YINSE   +P         RG++QRLKGKQGRFRGNLSGKRVEFTGRTVIS
Sbjct: 302  THLQIQVVEYINSEAPCIP-----DSKHRGLVQRLKGKQGRFRGNLSGKRVEFTGRTVIS 356

Query: 1281 PDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGSKLN 1460
            PDPNLKITEVAIPILMA+VLTYPERVS YN+EKLRQ +RNGP KYPGAN+V+ PDGSK++
Sbjct: 357  PDPNLKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSKYPGANFVLRPDGSKVH 416

Query: 1461 LAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 1640
            L Y +++ +++ELKYGY+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNES
Sbjct: 417  LRYVDKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNES 476

Query: 1641 VCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1820
            VCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 477  VCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 536

Query: 1821 ITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARMRVY 2000
            ITRKDTFYDRAAFSLMCSYMGD MDPIDLPTPA+IKPIELWTGKQLF+VLIRP+A  RV+
Sbjct: 537  ITRKDTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGKQLFNVLIRPNANTRVF 596

Query: 2001 LNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYG 2180
            LNL + EK Y K +   TMCPNDG VYFRNSEL+CGQLGKATLGNGNKDGLF+VLLRDY 
Sbjct: 597  LNLIVKEKIYSKSE---TMCPNDGCVYFRNSELICGQLGKATLGNGNKDGLFAVLLRDYN 653

Query: 2181 AHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLINRYN 2360
             HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE+LN+ K+ +I++GY+EC   I+ Y+
Sbjct: 654  PHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHGHISSYS 713

Query: 2361 TGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSPINI 2540
             G L L PGCNAAQTLE  ITG LN IR  A  VCM  LHWRNSPLIMSQCGSKGSPINI
Sbjct: 714  KGELILQPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGSPINI 773

Query: 2541 SQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTM 2720
            SQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLT TEFFFHTM
Sbjct: 774  SQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTEFFFHTM 833

Query: 2721 GGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPANM 2900
            GGREGLVDTAVKTAETGYMSRRLMK LEDLS YYD+TVR +SG IVQ +YGDDGMDPA M
Sbjct: 834  GGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDGMDPAKM 893

Query: 2901 EGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAAFKE 3080
            EGK+G+PLNLD+LFMK  AT P  R   +LSP+EI    DDRLSK+D+TPEGGCSA+FK+
Sbjct: 894  EGKDGIPLNLDQLFMKIMATCP-LREQDTLSPAEILHIMDDRLSKYDMTPEGGCSASFKK 952

Query: 3081 SLSDFVKKSVVALRKTRRELGLDED---KVGEHVLENVAANISGITSQQLQVYLETCIHR 3251
             LSDF+ K V AL   RR L LDE+   K    VLE+VAANISGI+++QLQV+LETCI R
Sbjct: 953  MLSDFLHKRVAALCNIRRALQLDENHLQKQDYSVLESVAANISGISAKQLQVFLETCISR 1012

Query: 3252 YHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAVKKIG 3431
            YHLK++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA K I 
Sbjct: 1013 YHLKKIEAGGAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 1072

Query: 3432 TPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKIEDLQ 3611
            TPIITATLV D DV SAR+V+  ++KT+LGEVAK++K+     + ++ VKLD  +IE L 
Sbjct: 1073 TPIITATLVSDRDVLSARMVRSSLQKTVLGEVAKAIKIVLKSSQPYIVVKLDMERIEALH 1132

Query: 3612 MKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKMLLDVI 3791
            M+IS+ +V Q+IL HPK KLK +HI +L   KLK++PPEAD+  L+F+L SLK +L  VI
Sbjct: 1133 MRISSQSVQQAILNHPKTKLKPEHIRVLGNNKLKIYPPEADRSKLQFELHSLKAVLPKVI 1192

Query: 3792 VEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTLGIEA 3971
            V+GI TVERAVINH      YNLL+EGTNL AVMGTPG+DG KTKSNHIIE++QT+GIEA
Sbjct: 1193 VKGIATVERAVINH--ANGVYNLLVEGTNLLAVMGTPGIDGSKTKSNHIIEVQQTIGIEA 1250

Query: 3972 ARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLMLASFE 4151
            AR+CII+EI+YTM+ HGMSID RHMMLLAD+MT++G+VLGIT  GI+KMKDSVLMLASFE
Sbjct: 1251 ARQCIINEIQYTMRNHGMSIDARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFE 1310

Query: 4152 KTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDLIM 4325
            KT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILKV+QR + +     RPD I+
Sbjct: 1311 KTAEHLFNASYSGRNDQIEGVSECIIMGIPMQLGTGILKVRQRVEQLPELKYRPDPII 1368


>XP_018682186.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis] XP_018682187.1 PREDICTED:
            DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
          Length = 1372

 Score = 1964 bits (5089), Expect = 0.0
 Identities = 994/1379 (72%), Positives = 1137/1379 (82%), Gaps = 4/1379 (0%)
 Frame = +3

Query: 201  DEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQGLLD 380
            +EK   TKEP+IEDVGPQRIKSIRFS  SG EI   AEVQV+ +  Y    +P++ GLLD
Sbjct: 5    EEKLRCTKEPYIEDVGPQRIKSIRFSTFSGEEIKKLAEVQVWNNRIYGIDLRPVENGLLD 64

Query: 381  SHMGPL-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILL 557
              MG   K G CATCHG+FT+CPGHFGY KLTLPVFNVG+F++I+++LKCICK+CARILL
Sbjct: 65   PKMGAANKAGVCATCHGNFTECPGHFGYLKLTLPVFNVGFFNSILNVLKCICKACARILL 124

Query: 558  MEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAVAHD 737
            +E DR+ FLKKMR+P  D+  KNA  KK+ +KCK S C  CG  NG VKKA S  A+AHD
Sbjct: 125  LENDRRIFLKKMRNPKADIFMKNALMKKIRDKCKISICPWCGSRNGVVKKARSSFAIAHD 184

Query: 738  LSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRPEK 917
             S+  + + +  R+A+SH K A ++F IV+VL+PV VL+LFK+M+DEDCELL+LYDRP+K
Sbjct: 185  FSRSVDESIEVVRAALSHIK-AKSSFQIVHVLSPVTVLSLFKRMVDEDCELLNLYDRPDK 243

Query: 918  LIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSLGL 1097
            LI+T IAVPPVA+RPSVF+D G  SNED IT+ L  +I  ++ L+EDL+ A PP   L  
Sbjct: 244  LIVTTIAVPPVAVRPSVFVDFGKSSNEDSITTILKNIINTNSILREDLEGAAPPFKCLDC 303

Query: 1098 WEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRTVI 1277
            W HLQ++V  YINSE   VP         RG++QRLKGKQGRFRGNLSGKRVEFTGRTVI
Sbjct: 304  WAHLQIQVVEYINSEAPSVP-----DSKHRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVI 358

Query: 1278 SPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGSKL 1457
            SPDPNLKITEVAIP+LMAK LTYPERVS YN+EKLRQ I NGP KYPGAN+++  DG+K 
Sbjct: 359  SPDPNLKITEVAIPVLMAKKLTYPERVSAYNIEKLRQRICNGPDKYPGANFILLGDGTKQ 418

Query: 1458 NLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1637
            +L Y ++K  + ELKYGYIVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLRYVDKKTAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1638 SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1817
            SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1818 LITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARMRV 1997
            LITRKDTFYDRAAFSLMCSYMGD MDPIDLP+PA+IKPIELWTGKQLFSVLIRP+AR +V
Sbjct: 539  LITRKDTFYDRAAFSLMCSYMGDSMDPIDLPSPAIIKPIELWTGKQLFSVLIRPNARTKV 598

Query: 1998 YLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDY 2177
            +LNL + EK Y K +   TMCP+DGYVYFRNSEL+CGQLGK TLGNGNKDGLFSVLLRDY
Sbjct: 599  FLNLMVKEKIYTKSE---TMCPSDGYVYFRNSELICGQLGKVTLGNGNKDGLFSVLLRDY 655

Query: 2178 GAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLINRY 2357
             +HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLN+ KK +ID+GY+EC +LI+ Y
Sbjct: 656  NSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKIDEGYRECHELISLY 715

Query: 2358 NTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSPIN 2537
              G L L PGCNAAQTLE  ITG LN IR  A  VCM  LHWRNSPLIMSQCGSKGSPIN
Sbjct: 716  GKGKLTLQPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSPLIMSQCGSKGSPIN 775

Query: 2538 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHT 2717
            ISQMV+CVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLTATEFFFHT
Sbjct: 776  ISQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHT 835

Query: 2718 MGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPAN 2897
            MGGREGLVDTAVKTAETGYMSRRLMK LEDLS YYDETVRN+SGGIVQ LYGDDGMDPA 
Sbjct: 836  MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMDPAK 895

Query: 2898 MEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAAFK 3077
            MEGK+G+PLN+D+LFMK  AT P  R H  LSP+E  +  DDRL+K+D++PEGGCSAAFK
Sbjct: 896  MEGKDGIPLNMDQLFMKVMATCP-PREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFK 954

Query: 3078 ESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANISGITSQQLQVYLETCIH 3248
            + LSDFV K V AL   R+ L LDE  +G     VLENVAA ISGI+S+QL+V+LETCI 
Sbjct: 955  KLLSDFVHKRVSALANMRKSLKLDETDMGRKDSTVLENVAAKISGISSKQLEVFLETCIS 1014

Query: 3249 RYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAVKKI 3428
            RYH K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA K I
Sbjct: 1015 RYHSKKVEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKNI 1074

Query: 3429 GTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKIEDL 3608
             TPI+TATL+   DV SAR+VK  IEKT+LGEVAK+LK+     R ++ VKLD   IE L
Sbjct: 1075 STPIVTATLLNGRDVLSARVVKSCIEKTVLGEVAKALKIVLKSSRPYIVVKLDMDLIEAL 1134

Query: 3609 QMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKMLLDV 3788
             M++SA +V  SIL HPKIKLK +HI  +   KLK++PPEAD+  L+F++ SLK ML  V
Sbjct: 1135 HMRVSAESVCHSILNHPKIKLKSEHINNIGSDKLKIYPPEADRRKLQFEMHSLKAMLPKV 1194

Query: 3789 IVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTLGIE 3968
            IV+GIPTVERAVIN  +    YNLL+EGTNL AVMGTPG+D  KT+SNH+IE+++TLGIE
Sbjct: 1195 IVKGIPTVERAVIN--ETNGVYNLLVEGTNLLAVMGTPGIDASKTRSNHVIEVQRTLGIE 1252

Query: 3969 AARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLMLASF 4148
            AAR+CII+EI+YTM+ HGMSID RHMMLLAD+MT+KG+VLGIT  GI+KMK+SVLMLASF
Sbjct: 1253 AARQCIINEIQYTMRGHGMSIDTRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASF 1312

Query: 4149 EKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDLIM 4325
            EKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILKV+QR + +      PD I+
Sbjct: 1313 EKTAEHLFNASYGGRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEKLPELKYAPDPII 1371


>JAT40403.1 DNA-directed RNA polymerase III subunit RPC1 [Anthurium amnicola]
          Length = 1376

 Score = 1932 bits (5004), Expect = 0.0
 Identities = 974/1382 (70%), Positives = 1135/1382 (82%), Gaps = 4/1382 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  ++   FTKE + ED+GP++IKSIRFS  SG EI  +AEVQV+ + FYD   KP++ G
Sbjct: 2    ARQEDMVRFTKELYSEDIGPRKIKSIRFSTFSGEEIRKSAEVQVWNNRFYDANVKPVEHG 61

Query: 372  LLDSHMGP-LKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MGP  K GFCATCHGSF+DCPGHFG+ KLTLPVFN+GYF++I++ILKCICKSCAR
Sbjct: 62   LLDLRMGPGSKMGFCATCHGSFSDCPGHFGFLKLTLPVFNIGYFNSILNILKCICKSCAR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            ILL EK+RK++LKKMR+P  D+ QKNA  K + +KCKASRC  CGYING VKK  S L +
Sbjct: 122  ILLPEKERKEYLKKMRNPRSDISQKNAYVKAIRDKCKASRCVRCGYINGVVKKGQSSLGI 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
              D +KV + + +E  SA+SH K+    F   +VL+  +VL LFK M+DEDCE+LHL DR
Sbjct: 182  VQDFTKVHDESLEEFHSALSHIKDKE-RFRRTHVLSSDRVLTLFKSMVDEDCEVLHLADR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+TDIAVPPVAIRPSVF+D  + SNED IT+ L  +I  ++ L+EDL+ A P    
Sbjct: 241  PEKLIVTDIAVPPVAIRPSVFVDLKS-SNEDSITNMLRNIINTNSILREDLEGAAPAFKC 299

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
            L  W  LQ  VA YINSE  GV          RG +QRLKGKQGRFRGNLSGKR EFTGR
Sbjct: 300  LDCWAVLQALVAEYINSEAPGVA-----DSKNRGFVQRLKGKQGRFRGNLSGKRAEFTGR 354

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIPILMA++LTYPERVS +N+EKLRQC+RNGP KYPGAN+V  PDG
Sbjct: 355  TVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPTKYPGANFVSHPDG 414

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            ++L+L Y  RK +++ELKYGYIVERHLEDGD+VLFNRQPSLHRMSIMSHRAR+MPWRTLR
Sbjct: 415  TRLHLKYVERKNVANELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARVMPWRTLR 474

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 475  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLT 534

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFLITRKDTFYDRAAFSLMCSYM DGMD IDLPTPAL+KP+ELWTGKQLFSVLIRP+A 
Sbjct: 535  SSFLITRKDTFYDRAAFSLMCSYMNDGMDSIDLPTPALLKPVELWTGKQLFSVLIRPNAH 594

Query: 1989 MRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLL 2168
             RV+LNLT+ E+ Y K ++  TMC NDG+VYFRNSELL GQLGK TLGNGNKDGLFSVL+
Sbjct: 595  TRVFLNLTVKERIYSKSRE--TMCHNDGFVYFRNSELLSGQLGKVTLGNGNKDGLFSVLI 652

Query: 2169 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLI 2348
            RDY  HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPGE LNR KK  I+ GY+ECD  I
Sbjct: 653  RDYNTHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGESLNRKKKETIENGYEECDKDI 712

Query: 2349 NRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGS 2528
              YN G L+L  GCNAA+TLE++IT +LN+IRE   K+CM  LHWRNSPLIMSQCGSKGS
Sbjct: 713  CSYNKGNLQLQSGCNAAETLEASITKRLNDIREDTGKICMKELHWRNSPLIMSQCGSKGS 772

Query: 2529 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFF 2708
             INISQM+ACVGQQSVGGRRAPNGFIDRSLPHF  NSKTP+AKGFVANSFY+GLTATEFF
Sbjct: 773  AINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRNSKTPSAKGFVANSFYSGLTATEFF 832

Query: 2709 FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMD 2888
            FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLST+YD+TVRN+SGGIVQ +YGDD MD
Sbjct: 833  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTHYDQTVRNASGGIVQFVYGDDAMD 892

Query: 2889 PANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSA 3068
            PA MEG++G PLNL++LF K  AT P   +H +LSPSEI +  D RL++ D+  EGG S 
Sbjct: 893  PAKMEGEDGNPLNLNQLFSKIMATCP-LGSHATLSPSEILQIVDKRLTETDMHTEGGSSD 951

Query: 3069 AFKESLSDFVKKSVVALRKTRRELGLDEDKVGE---HVLENVAANISGITSQQLQVYLET 3239
            AF++SL+DF+ K+V AL+KTR+ L LDED +G+    +LENVA+ ISGI+S+QL+V+LET
Sbjct: 952  AFRKSLTDFISKTVAALKKTRKALQLDEDNIGKGDLDILENVASKISGISSKQLKVFLET 1011

Query: 3240 CIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAV 3419
            CI RYHLK++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA 
Sbjct: 1012 CISRYHLKKVEPGGTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1071

Query: 3420 KKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKI 3599
            K I TPIITA LVCDN V SARIVKG IEKT+LGEV K +K+     +  + V LD  +I
Sbjct: 1072 KNIKTPIITAALVCDN-VESARIVKGCIEKTLLGEVCKCVKIVLKSSQPHIVVVLDMEQI 1130

Query: 3600 EDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKML 3779
            E L M+IS+YTV QSIL+HPKIKLK ++I++ +  KL+++PP+AD+  ++F+L SL+ +L
Sbjct: 1131 EALHMRISSYTVQQSILEHPKIKLKHENIKVPTAYKLRIYPPQADRNCVQFELHSLRAIL 1190

Query: 3780 LDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTL 3959
              VIV+GIPTV+RA+IN + +  +  LL+EGTNL AVMG PGVDG KT SNH+IE+  TL
Sbjct: 1191 PKVIVKGIPTVQRAIINKENKDARCKLLVEGTNLLAVMGAPGVDGSKTTSNHVIEVCHTL 1250

Query: 3960 GIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLML 4139
            GIEAARKCIIDEI YTM++H M IDIRHMMLLADVMT+KG++LGIT  GI KMKDSVLML
Sbjct: 1251 GIEAARKCIIDEINYTMKSHSMKIDIRHMMLLADVMTYKGEILGITRFGITKMKDSVLML 1310

Query: 4140 ASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDL 4319
            ASFEKT +HLFNAS+ GR DQIEGVSECIIMGIPMQ+GTGILKV+QR D +      PD 
Sbjct: 1311 ASFEKTADHLFNASVNGREDQIEGVSECIIMGIPMQLGTGILKVRQRVDHLPELKYEPDP 1370

Query: 4320 IM 4325
            I+
Sbjct: 1371 IL 1372


>XP_002284657.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Vitis vinifera]
          Length = 1383

 Score = 1917 bits (4966), Expect = 0.0
 Identities = 962/1366 (70%), Positives = 1127/1366 (82%), Gaps = 11/1366 (0%)
 Frame = +3

Query: 216  FTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQGLLDSHMGP 395
            FTKEP+IEDVGP++I+SIRF++ S SEI  AAEVQV++  +YD  +KPI+ GLLD  MGP
Sbjct: 7    FTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMGP 66

Query: 396  L-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILLMEKDR 572
              K G CATC G+F DCPGH GY  L LPV+NVGY STIVDILKCICKSC+R+LL EK  
Sbjct: 67   ANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKAS 126

Query: 573  KKFLKKMRSPNEDVLQKNANAKKVVEKC-------KASRCFHCGYINGAVKKAGSILAVA 731
            K +LKKMRS   + L+K    KK+V+KC       KA +C  CGY+NG VKKA S+L + 
Sbjct: 127  KDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGII 186

Query: 732  HDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRP 911
            HD SK+ +G+ +EC SAISHTKE+ A+F +V++L PVKVL+LFK+M+DEDC+LL+L +RP
Sbjct: 187  HDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERP 246

Query: 912  EKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSL 1091
            EKL++T+I VPP+AIRPSVFMD G  SNE+D+T +L ++I+A+A L ++LQ     S  L
Sbjct: 247  EKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCL 306

Query: 1092 GLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRT 1271
              W++LQ+EVA YINS+VRGVPL MQ  +PL G +QRLKGKQGRFRGNLSGKRVE+TGRT
Sbjct: 307  AGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 366

Query: 1272 VISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGS 1451
            VISPDPNLKITEVAIPILMAK+L+YPERVS++N+EKLRQCI NGP KYPGA  +  PDGS
Sbjct: 367  VISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGS 426

Query: 1452 KLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRF 1631
              +L +  RKR +DELKYGYIVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 427  MRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRF 486

Query: 1632 NESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 1811
            NESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS
Sbjct: 487  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 546

Query: 1812 SFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARM 1991
            SFLITRKDTFYDRAAFSLMCSYMGDGMD +DLPTPA+IKP+ELWTGKQLF+VL+RPHA +
Sbjct: 547  SFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANV 606

Query: 1992 RVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLR 2171
            RVYLNLT+ EK Y+K + K+TMCP+DG+VYFRNSEL+ GQLGKATLGNGNKDGLFSVLLR
Sbjct: 607  RVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLR 666

Query: 2172 DYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLIN 2351
            DY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG  LN  K   I++GY+ C +LI 
Sbjct: 667  DYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQ 726

Query: 2352 RYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSP 2531
            +YN G LKL PGCNAAQTLE+ ITG LN IRE  A VCM  LHWRNSPLIMSQCGSKGSP
Sbjct: 727  QYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSP 786

Query: 2532 INISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFF 2711
            INISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP  SKTP AKGFVA+SFYTGLTATEFFF
Sbjct: 787  INISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFF 846

Query: 2712 HTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDP 2891
            HTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDLS  YDETVRN++G IVQ LYGDDGMDP
Sbjct: 847  HTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDP 906

Query: 2892 ANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAA 3071
            A MEGK+G PLN +RLF+K KAT PA   + SLS  +I + T  RL +H+ + E GCS A
Sbjct: 907  ARMEGKDGFPLNFNRLFLKVKATCPAGE-NASLSALQI-EETVKRLKEHNTSAE-GCSDA 963

Query: 3072 FKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANISGITSQQLQVYLETC 3242
            FK +LS F+++     + TR  LGL  + VGE    + E  A NISGITS+QLQV+L+TC
Sbjct: 964  FKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTC 1023

Query: 3243 IHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAVK 3422
            I RY LKR+E           SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIIN  K
Sbjct: 1024 ISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK 1083

Query: 3423 KIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKIE 3602
            +I TPIITA L C+N+V +AR+VKGRIE+T LG+VAKS+K+    R   ++V LD   I+
Sbjct: 1084 RISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQ 1143

Query: 3603 DLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKMLL 3782
              Q+ I +  V +SIL++ +IKLKQQHI++L   KL++  P+ D+ T+ F+L +LK +L 
Sbjct: 1144 ASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVH-PQGDRSTIHFELHALKNLLP 1202

Query: 3783 DVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTLG 3962
             V+V+GI TVERAVIN D  K KYNLL+EGT L+ VMGT GV GR+T SNHIIE++QTLG
Sbjct: 1203 TVVVKGIETVERAVINKD-NKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLG 1261

Query: 3963 IEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLMLA 4142
            IEAARKCII+EI+YTM +HGMSIDIRHMMLLAD+MTF+G+VLGIT  GI KM  SVLMLA
Sbjct: 1262 IEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 1321

Query: 4143 SFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQR 4280
            SFEKT +HLFNAS+ GR D+IEGVSECIIMGIPMQ+GTGILKV+QR
Sbjct: 1322 SFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQR 1367


>XP_015636431.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza sativa
            Japonica Group] CAE02045.2 OJ990528_30.3 [Oryza sativa
            Japonica Group] CAD41360.2 OSJNBa0076N16.24 [Oryza sativa
            Japonica Group] BAF15089.1 Os04g0492300 [Oryza sativa
            Japonica Group] CAH67354.1 OSIGBa0130B08.14 [Oryza sativa
            Indica Group] CAH67535.1 H0425E08.3 [Oryza sativa Indica
            Group] BAH00234.1 unnamed protein product [Oryza sativa
            Japonica Group] EEC77539.1 hypothetical protein OsI_16437
            [Oryza sativa Indica Group] BAS89853.1 Os04g0492300
            [Oryza sativa Japonica Group]
          Length = 1383

 Score = 1902 bits (4927), Expect = 0.0
 Identities = 961/1388 (69%), Positives = 1127/1388 (81%), Gaps = 10/1388 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFSM SG+E+  +AEVQV+ S  Y+   KP+  G
Sbjct: 2    ARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPNG 61

Query: 372  LLDSHMGPL-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD+ MG   K G C+TCHGSF +CPGHFGY KL LPVFNVG+F+ I+D+LKCICKSC+R
Sbjct: 62   LLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LLMEKDR +FLKKMR+P  D LQK+A  KKV +KCK SRC  CG+ING  KK  + L +
Sbjct: 122  VLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFINGVAKKGRAGLII 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SK  +G+ +E R A+SH KE   +   V +L P  VL+LFK+M DEDCELL+L DR
Sbjct: 182  LHDCSKTLDGSTEELRDALSHKKE-KLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSVF+  G MSNED IT  L  +   ++ L+E+LQ+       
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W+HLQ++V  YINS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQHLQLQVVEYINSDAPSLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNL+ITEVAIPILMA+VLTYPERVSYYN+EKLRQCIRNGP K+PGAN++I PDG
Sbjct: 356  TVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            +KL+L Y +R+  + +LKYG +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 416  TKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKD FYDR++FSL+CSY+GD M+ IDLPTPALIKPIELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAC 595

Query: 1989 MRVYLNLTLTEKNYDKGK----DKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLF 2156
             +V+LNLT+ EK Y   K    + + MCPNDG+VYFRNSELL GQ+GKATLGNGNKDG+F
Sbjct: 596  TKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMF 655

Query: 2157 SVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKEC 2336
            S L+RDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGEHLN+ KK++ID GYK+C
Sbjct: 656  STLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDC 715

Query: 2337 DDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCG 2516
             DLI  Y+ G L+L PGCNAAQTLE +IT  LN IRE A KVCM +LHWRNSPLIMSQCG
Sbjct: 716  HDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCG 775

Query: 2517 SKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTA 2696
            SKGSPINISQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLTA
Sbjct: 776  SKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTA 835

Query: 2697 TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGD 2876
            TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN+SGGIVQ LYGD
Sbjct: 836  TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGD 895

Query: 2877 DGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEG 3056
            DGMDPA MEGK+G PLNLD+LFMK  AT P  R   +LSP EI +  +D+LS+HD + + 
Sbjct: 896  DGMDPAKMEGKDGKPLNLDQLFMKVMATCP-QRGQNTLSPGEILQILNDKLSEHDASSDD 954

Query: 3057 GCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANISGITSQQLQV 3227
            GCS  FK+ L+ F++  +  L+ TRR L LDED VGE      E++AANISGI+ +QLQV
Sbjct: 955  GCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQV 1014

Query: 3228 YLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREI 3407
            +L+TC+ RYHLK++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EI
Sbjct: 1015 FLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1074

Query: 3408 INAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLD 3587
            INA KKI TPIITA L+ + DV SARIVKG +EK +LGEVA+++K+     +  + VKLD
Sbjct: 1075 INAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLD 1134

Query: 3588 KAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSL 3767
              +IE L M ISA +V  SIL HPKIKLK +H+ ++   KL+++P   DK  L ++L  L
Sbjct: 1135 MQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHL 1194

Query: 3768 KKMLLDVIVEGIPTVERAVINHDKEKN--KYNLLIEGTNLRAVMGTPGVDGRKTKSNHII 3941
            K ML  VIV+GIPTVERAVI+   E+N  +Y LL+EGTNL AVMGTPGVD  KTKSNHI+
Sbjct: 1195 KSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIM 1254

Query: 3942 EIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMK 4121
            E+ +TLGIEAAR+ IIDEI+YTM++HGM+ID RHMMLLAD+MT+KG++LGIT  GIAKMK
Sbjct: 1255 EVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMK 1314

Query: 4122 DSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVY 4301
             SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILKV+QR D +  +
Sbjct: 1315 SSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEF 1374

Query: 4302 NRRPDLIM 4325
              +PD I+
Sbjct: 1375 KYQPDPIL 1382


>XP_020113843.1 DNA-directed RNA polymerase III subunit 1 isoform X1 [Ananas comosus]
          Length = 1377

 Score = 1897 bits (4915), Expect = 0.0
 Identities = 969/1382 (70%), Positives = 1112/1382 (80%), Gaps = 4/1382 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEP+IEDVG ++IKSIRF+ LS  EI  +AEVQV+ +  Y    +P++ G
Sbjct: 2    APVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYGNDLQPVENG 61

Query: 372  LLDSHMGPLKGGF-CATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG       CATCHG FT+CPGHFGY KLTLPVFNVGYFS+I+DILKCICK+C+R
Sbjct: 62   LLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            ILL E+DR++FL+KMR+P  D LQKNA  KK+ +KCK  RC  CG  NG VKKA + LA+
Sbjct: 122  ILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMFRCPRCGSSNGVVKKARTGLAI 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
            A   +K  + + +E RSA+SH K+  + F   +V+TP    ALFK+MLDEDCE+L+LYDR
Sbjct: 182  AQHFTKSVDESAEEIRSALSHKKDKQS-FQAAHVITPGAAFALFKRMLDEDCEVLNLYDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPP  IRPS F+  G  SNED ITS L  +I  ++ L+EDL+   P S  
Sbjct: 241  PEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPASKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
            +  W HLQ++V  YINS+   VP     +   RG++QRLKGKQGRFRGNLSGKRVE+TGR
Sbjct: 301  IDCWTHLQIQVVEYINSDSPSVP-----ESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA VLTYPERVSYYN+EKLRQCI NGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            S ++L Y N+K ++++LKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  STMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFLITRKDTFYDRA FSLMCSYMGD MD IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLITRKDTFYDRATFSLMCSYMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNAC 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLL 2168
             RV+LNL + EK Y    D +TMCP DGYVYFRNSEL+ GQLGK TLGNGNKDGLFSVLL
Sbjct: 596  TRVFLNLIVKEKIYT---DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLL 652

Query: 2169 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLI 2348
            RDY +HAAASCMNR+AKLSARWIGNHGFSIGIDDVQPGE+LN+ KK +ID+GY+EC + I
Sbjct: 653  RDYNSHAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHI 712

Query: 2349 NRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGS 2528
            + Y+ G L   PG NAAQTLE  IT  LN IR  A  VCM +LHWRNSPLIMSQCGSKGS
Sbjct: 713  SSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGS 772

Query: 2529 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFF 2708
             INISQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLTATEFF
Sbjct: 773  AINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 832

Query: 2709 FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMD 2888
            FHTMGGREGLVDTAVKTAETGYMSRRL+KSLEDLS +YD+TVRN+S GIVQ LYGDDGMD
Sbjct: 833  FHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMD 892

Query: 2889 PANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSA 3068
            PA MEGK+G+PLNL +LFMK  AT P  R   +LSPSEI +  DDRLSKHD++PEGGCSA
Sbjct: 893  PAKMEGKDGIPLNLSQLFMKVMATCP-HRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSA 951

Query: 3069 AFKESLSDFVKKSVVALRKTRRELGLDEDKVGE---HVLENVAANISGITSQQLQVYLET 3239
            AFK+ L+DFV   VV +R TRR L LDED   +    + E +AANISGI+S+QLQV+L+ 
Sbjct: 952  AFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDN 1011

Query: 3240 CIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAV 3419
            CI RYH K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINA 
Sbjct: 1012 CISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAA 1071

Query: 3420 KKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKI 3599
            K I TPIITA L+ D D  SA IVKG IEKT+LGEVAK++++     R ++SVKLD   I
Sbjct: 1072 KNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLI 1131

Query: 3600 EDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKML 3779
            + L M+ISA +V  SIL HPKIKLK +HI IL   KL+++ PEADK  L+F L SLK ML
Sbjct: 1132 KALHMRISADSVQLSILNHPKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAML 1191

Query: 3780 LDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTL 3959
              VIV+GIPT ER VI+  K+   Y L IEGTNL AVMGTPG+D R TK NH+IE+ +TL
Sbjct: 1192 PKVIVKGIPTAERVVIDKTKQ-GIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETL 1250

Query: 3960 GIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLML 4139
            G+EAAR+ IIDEI  TM+ HGMSID RHMMLLADVMT+KG+VLGIT  GIAKMK SVLML
Sbjct: 1251 GVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLML 1310

Query: 4140 ASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDL 4319
            ASFEKT EHLFNAS  GR D+I+GVSECIIMGIPM++GTGILKVKQR + +  +   P  
Sbjct: 1311 ASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGP 1370

Query: 4320 IM 4325
            ++
Sbjct: 1371 VL 1372


>XP_020113845.1 DNA-directed RNA polymerase III subunit 1 isoform X3 [Ananas comosus]
          Length = 1377

 Score = 1897 bits (4913), Expect = 0.0
 Identities = 969/1382 (70%), Positives = 1112/1382 (80%), Gaps = 4/1382 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEP+IEDVG ++IKSIRF+ LS  EI  +AEVQV+ +  Y    +P++ G
Sbjct: 2    APVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYGNDLQPVENG 61

Query: 372  LLDSHMGPLKGGF-CATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG       CATCHG FT+CPGHFGY KLTLPVFNVGYFS+I+DILKCICK+C+R
Sbjct: 62   LLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            ILL E+DR++FL+KMR+P  D LQKNA  KK+ +KCK  RC  CG  NG VKKA + LA+
Sbjct: 122  ILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMFRCPRCGSSNGVVKKARTGLAI 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
            A   +K  + + +E RSA+SH K+  + F   +V+TP    ALFK+MLDEDCE+L+LYDR
Sbjct: 182  AQHFTKSVDESAEEIRSALSHKKDKQS-FQAAHVITPGAAFALFKRMLDEDCEVLNLYDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPP  IRPS F+  G  SNED ITS L  +I  ++ L+EDL+   P S  
Sbjct: 241  PEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPASKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
            +  W HLQ++V  YINS+   VP     +   RG++QRLKGKQGRFRGNLSGKRVE+TGR
Sbjct: 301  IDCWTHLQIQVVEYINSDSPSVP-----ESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA VLTYPERVSYYN+EKLRQCI NGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            S ++L Y N+K ++++LKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  STMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFLITRKDTFYDRA FSLMCS+MGD MD IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNAC 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLL 2168
             RV+LNLT+ EK Y   +   TMCP DGYVYFRNSEL+ GQLGK TLGNGNKDGLFSVLL
Sbjct: 596  TRVFLNLTVKEKIYTANE---TMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLL 652

Query: 2169 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLI 2348
            RDY +HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE+LN+ KK +ID+GY+EC + I
Sbjct: 653  RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHI 712

Query: 2349 NRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGS 2528
            + Y+ G L   PG NAAQTLE  IT  LN IR  A  VCM +LHWRNSPLIMSQCGSKGS
Sbjct: 713  SSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGS 772

Query: 2529 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFF 2708
             INISQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLTATEFF
Sbjct: 773  AINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 832

Query: 2709 FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMD 2888
            FHTMGGREGLVDTAVKTAETGYMSRRL+KSLEDLS +YD+TVRN+S GIVQ LYGDDGMD
Sbjct: 833  FHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMD 892

Query: 2889 PANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSA 3068
            PA MEGK+G+PLNL +LFMK  AT P  R   +LSPSEI +  DDRLSKHD++PEGGCSA
Sbjct: 893  PAKMEGKDGIPLNLSQLFMKVMATCP-HRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSA 951

Query: 3069 AFKESLSDFVKKSVVALRKTRRELGLDEDKVGE---HVLENVAANISGITSQQLQVYLET 3239
            AFK+ L+DFV   VV +R TRR L LDED   +    + E +AANISGI+S+QLQV+L+ 
Sbjct: 952  AFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDN 1011

Query: 3240 CIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAV 3419
            CI RYH K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINA 
Sbjct: 1012 CISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAA 1071

Query: 3420 KKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKI 3599
            K I TPIITA L+ D D  SA IVKG IEKT+LGEVAK++++     R ++SVKLD   I
Sbjct: 1072 KNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLI 1131

Query: 3600 EDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKML 3779
            + L M+ISA +V  SIL HPKIKLK +HI IL   KL+++ PEADK  L+F L SLK ML
Sbjct: 1132 KALHMRISADSVQLSILNHPKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAML 1191

Query: 3780 LDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTL 3959
              VIV+GIPT ER VI+  K+   Y L IEGTNL AVMGTPG+D R TK NH+IE+ +TL
Sbjct: 1192 PKVIVKGIPTAERVVIDKTKQ-GIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETL 1250

Query: 3960 GIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLML 4139
            G+EAAR+ IIDEI  TM+ HGMSID RHMMLLADVMT+KG+VLGIT  GIAKMK SVLML
Sbjct: 1251 GVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLML 1310

Query: 4140 ASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDL 4319
            ASFEKT EHLFNAS  GR D+I+GVSECIIMGIPM++GTGILKVKQR + +  +   P  
Sbjct: 1311 ASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGP 1370

Query: 4320 IM 4325
            ++
Sbjct: 1371 VL 1372


>XP_020113844.1 DNA-directed RNA polymerase III subunit 1 isoform X2 [Ananas comosus]
          Length = 1377

 Score = 1896 bits (4911), Expect = 0.0
 Identities = 968/1382 (70%), Positives = 1112/1382 (80%), Gaps = 4/1382 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEP+IEDVG ++IKSIRF+ LS  EI  +AEVQV+ +  Y    +P++ G
Sbjct: 2    APVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYGNDLQPVENG 61

Query: 372  LLDSHMGPLKGGF-CATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG       CATCHG FT+CPGHFGY KLTLPVFNVGYFS+I+DILKCICK+C+R
Sbjct: 62   LLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            ILL E+DR++FL+KMR+P  D LQKNA  KK+ +KCK  RC  CG  NG VKKA + LA+
Sbjct: 122  ILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMFRCPRCGSSNGVVKKARTGLAI 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
            A   +K  + + +E RSA+SH K+  + F   +V+TP    ALFK+MLDEDCE+L+LYDR
Sbjct: 182  AQHFTKSVDESAEEIRSALSHKKDKQS-FQAAHVITPGAAFALFKRMLDEDCEVLNLYDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPP  IRPS F+  G  SNED ITS L  +I  ++ L+EDL+   P S  
Sbjct: 241  PEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPASKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
            +  W HLQ++V  YINS+   VP     +   RG++QRLKGKQGRFRGNLSGKRVE+TGR
Sbjct: 301  IDCWTHLQIQVVEYINSDSPSVP-----ESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA VLTYPERVSYYN+EKLRQCI NGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            S ++L Y N+K ++++LKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  STMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFLITRKDTFYDRA FSLMCS+MGD MD IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNAC 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLL 2168
             RV+LNL + EK Y    D +TMCP DGYVYFRNSEL+ GQLGK TLGNGNKDGLFSVLL
Sbjct: 596  TRVFLNLIVKEKIYT---DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLL 652

Query: 2169 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLI 2348
            RDY +HAAASCMNR+AKLSARWIGNHGFSIGIDDVQPGE+LN+ KK +ID+GY+EC + I
Sbjct: 653  RDYNSHAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHI 712

Query: 2349 NRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGS 2528
            + Y+ G L   PG NAAQTLE  IT  LN IR  A  VCM +LHWRNSPLIMSQCGSKGS
Sbjct: 713  SSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGS 772

Query: 2529 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFF 2708
             INISQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTGLTATEFF
Sbjct: 773  AINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 832

Query: 2709 FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMD 2888
            FHTMGGREGLVDTAVKTAETGYMSRRL+KSLEDLS +YD+TVRN+S GIVQ LYGDDGMD
Sbjct: 833  FHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMD 892

Query: 2889 PANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSA 3068
            PA MEGK+G+PLNL +LFMK  AT P  R   +LSPSEI +  DDRLSKHD++PEGGCSA
Sbjct: 893  PAKMEGKDGIPLNLSQLFMKVMATCP-HRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSA 951

Query: 3069 AFKESLSDFVKKSVVALRKTRRELGLDEDKVGE---HVLENVAANISGITSQQLQVYLET 3239
            AFK+ L+DFV   VV +R TRR L LDED   +    + E +AANISGI+S+QLQV+L+ 
Sbjct: 952  AFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDN 1011

Query: 3240 CIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAV 3419
            CI RYH K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINA 
Sbjct: 1012 CISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAA 1071

Query: 3420 KKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKI 3599
            K I TPIITA L+ D D  SA IVKG IEKT+LGEVAK++++     R ++SVKLD   I
Sbjct: 1072 KNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLI 1131

Query: 3600 EDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKML 3779
            + L M+ISA +V  SIL HPKIKLK +HI IL   KL+++ PEADK  L+F L SLK ML
Sbjct: 1132 KALHMRISADSVQLSILNHPKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAML 1191

Query: 3780 LDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQTL 3959
              VIV+GIPT ER VI+  K+   Y L IEGTNL AVMGTPG+D R TK NH+IE+ +TL
Sbjct: 1192 PKVIVKGIPTAERVVIDKTKQ-GIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETL 1250

Query: 3960 GIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVLML 4139
            G+EAAR+ IIDEI  TM+ HGMSID RHMMLLADVMT+KG+VLGIT  GIAKMK SVLML
Sbjct: 1251 GVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLML 1310

Query: 4140 ASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRPDL 4319
            ASFEKT EHLFNAS  GR D+I+GVSECIIMGIPM++GTGILKVKQR + +  +   P  
Sbjct: 1311 ASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGP 1370

Query: 4320 IM 4325
            ++
Sbjct: 1371 VL 1372


>XP_006653556.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza
            brachyantha]
          Length = 1389

 Score = 1873 bits (4852), Expect = 0.0
 Identities = 943/1398 (67%), Positives = 1122/1398 (80%), Gaps = 20/1398 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIED G +RIKSIRFSM SG+E+  +AEVQV+ S  Y+   +P+  G
Sbjct: 2    ARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPNG 61

Query: 372  LLDSHMGPL-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD+ MG   K G C+TCHGSF +CPGHFGY KL LPVFNVG+F+ I+D+LKCICK C+R
Sbjct: 62   LLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL+EKDR +FLKKMR+P  D LQK+A  KKV +KCK SRC  CG+ING  KK  + L +
Sbjct: 122  VLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFINGVAKKGRAGLII 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SK  +G+ +E + A+SH KE   +F  V++L P  VL+LFK+M DEDCELL+L DR
Sbjct: 182  LHDCSKTLDGSTEELKEALSHKKE-KLSFSAVHMLDPATVLSLFKRMTDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSVF+  G MSNED IT  L  +   ++ L+E+LQ+       
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W+HLQ++V  YINS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQHLQLQVVEYINSDAPSLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNL+ITEVAIPILMA+VLTYPERVSYYN+EKLRQCIRNGP K+PGAN++I  DG
Sbjct: 356  TVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQTDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            +KL+L Y +R+  + +LKYG +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 416  TKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKD FYDR++F+L+CSY+GD M+ IDLPTPAL+KPIELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNAC 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLL 2168
             +V+LNLT+ EK Y K ++  TMCPNDG+VYFRNSELL GQ+GK TLGNGNKDG+FS+L+
Sbjct: 596  TKVFLNLTVKEKIYSKSRE--TMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILV 653

Query: 2169 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLI 2348
            RDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDV+PGEHL++ KK +ID+GYKEC DLI
Sbjct: 654  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLI 713

Query: 2349 NRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGS 2528
              ++ G L L PGCNAAQTLE  IT  LN IREAA  +CM +LHWRNSPLIMSQCGSKGS
Sbjct: 714  TSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGS 773

Query: 2529 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLT----- 2693
            PINISQMV CVGQQSVGG RAPNGFIDR+LPHFPINSKTPAAKGFVANSFY GLT     
Sbjct: 774  PINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFF 833

Query: 2694 ------------ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVR 2837
                        ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVR
Sbjct: 834  FHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 893

Query: 2838 NSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKAT 3017
            N+SGGIVQ LYGDDGMDPA MEG++G PLNLD+LFMK  AT P  R   +LSP EI +  
Sbjct: 894  NASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCP-QRGQNTLSPGEILQIL 952

Query: 3018 DDRLSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGE--HVLENVAA 3191
            +D+LS+HD + + GCS  FK+ L DF++  +  L+ TRR L LDE+ VG+   + E++AA
Sbjct: 953  NDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIEESIAA 1012

Query: 3192 NISGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASM 3371
            NISGI+++QLQV+L+TC+ RYH K++E          QSIGEPGTQMTLKTFHFAGVASM
Sbjct: 1013 NISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1072

Query: 3372 NVTLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSY 3551
            NVTLGVPRI+EIINA KKI TPIITA L+   DV SAR+VKG +EK +LGEVA+ +K+  
Sbjct: 1073 NVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVL 1132

Query: 3552 LPRREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEA 3731
               +  + VKLD  +IEDL M ISA +V  SIL HP+IKLK +H+ ++   KL+++P   
Sbjct: 1133 KSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAI 1192

Query: 3732 DKYTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVD 3911
            DK  L ++L +LK ML  VIV+GIPTVERAVI+  +  +KY+LL+EGTNL AVMGTPGVD
Sbjct: 1193 DKSKLLYELHNLKSMLPKVIVKGIPTVERAVIS--QTGDKYSLLVEGTNLLAVMGTPGVD 1250

Query: 3912 GRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLG 4091
              KTKSNHI+E+ +TLGIEAAR+ IIDEI+YTM +HGM+ID RHMMLLAD+MT+KG++LG
Sbjct: 1251 AMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILG 1310

Query: 4092 ITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKV 4271
            IT  GIAKMK SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILKV
Sbjct: 1311 ITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKV 1370

Query: 4272 KQRDDPVQVYNRRPDLIM 4325
            +QR D +  +  +PD I+
Sbjct: 1371 RQRLDHLPEFKYQPDPIL 1388


>XP_006828249.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Amborella trichopoda] ERM95665.1 hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score = 1872 bits (4849), Expect = 0.0
 Identities = 951/1384 (68%), Positives = 1119/1384 (80%), Gaps = 14/1384 (1%)
 Frame = +3

Query: 216  FTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTK-KPIKQGLLDSHMG 392
            FTK+PF+ED+GP++IKS++F MLSG EI  AAE QVY+  +Y+ T  KP + G+LD+ MG
Sbjct: 10   FTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDTRMG 69

Query: 393  -PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILLMEKD 569
               K G CATC G F  CPGHFGY KL LPVF+VGYF T + +L+CICKSCARILL E++
Sbjct: 70   FSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLFEEE 129

Query: 570  RKKFLKKMRSPNEDVLQKNANAKKVVEKCKASR-CFHCGYINGAVKKAGSILAVAHDLSK 746
            RK+FLKK+R+P  ++ QKN   KKV++KCK  R C  CG  NG VKKAG    ++HD SK
Sbjct: 130  RKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKKAGPTFRISHDRSK 189

Query: 747  VPNGNFD----ECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRPE 914
                N+D    EC++AIS TK +N++F++V  LTP + LALF++M+DEDC+LL+LYDRPE
Sbjct: 190  A---NYDKLTKECKTAISQTKYSNSDFNMVENLTPQRALALFERMVDEDCDLLYLYDRPE 246

Query: 915  KLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSLG 1094
            KLI+T IAVPP  IRP+    +G+  NE+++T+KL ++++ +  L + +     P   + 
Sbjct: 247  KLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLIDHVNKGNLPQYYMD 304

Query: 1095 LWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRTV 1274
             W  LQV VA YINSE+  +PL  QP K   G++QRLKGKQGRFR NL GKRV+FTGRTV
Sbjct: 305  TWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRSNLEGKRVDFTGRTV 364

Query: 1275 ISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGSK 1454
            ISPDPNLKITEVAIP LMA++LTY ERV+ +N+EKLRQC+RNGP KYPGAN+VI+  G  
Sbjct: 365  ISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGANFVIS-GGDT 423

Query: 1455 LNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 1634
            L+L YGN+KR +DELK+G  VERHLEDG++VLFNRQPSLHRMSIM HRAR+MPWRTLRFN
Sbjct: 424  LSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRARVMPWRTLRFN 483

Query: 1635 ESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 1814
            ESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNGEILVASTQDFLTSS
Sbjct: 484  ESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSS 543

Query: 1815 FLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARMR 1994
            +LITRKDTFYDRA FSLMCSYMGDGM+ IDLPTPAL+KP+ELWTGKQLFSVLIRPHA M+
Sbjct: 544  YLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMK 603

Query: 1995 VYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRD 2174
            VY+NL+L EKNY KG +  TMC NDG+VY RNSEL+ GQLGKATLGNGNKDGLFSVLLRD
Sbjct: 604  VYVNLSLMEKNYSKGGE--TMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRD 661

Query: 2175 YGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLINR 2354
            Y +HAAASCMNRLAKLSARWIGNHGFSIGIDDV PG HL + K+ +I  GY  CD  I+ 
Sbjct: 662  YNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFIDA 721

Query: 2355 YNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSPI 2534
            Y+ G L L PGCNAAQTLE+ IT  LN IR+AAAKVCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 722  YDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSPI 781

Query: 2535 NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 2714
            NISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP N KTPAAKGFVANSFYTGLTA EFFFH
Sbjct: 782  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFFH 841

Query: 2715 TMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPA 2894
            TMGGREGLVDTAVKTA+TGY+SRRL+KSLEDLST+YD+TVRNSSG I+Q  YGDDGMDPA
Sbjct: 842  TMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPA 901

Query: 2895 NMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAAF 3074
             MEGK G+PLNLDRLFMK KAT PA+    SLSPSEI    +DRLSKHD+TPE GCS AF
Sbjct: 902  KMEGKSGVPLNLDRLFMKIKATCPAS-VSASLSPSEISTIVNDRLSKHDMTPERGCSMAF 960

Query: 3075 KESLSDFVKKSVVALRKTRRELGLDEDKVGEHV---LENVAANISGITSQQLQVYLETCI 3245
            KE LS+F+KK + A++KTR  LGLDED V +     LE+VAANISGI+ QQL+V+LETCI
Sbjct: 961  KEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRVFLETCI 1020

Query: 3246 HRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAVKK 3425
             RYHLKR+E          QSIGEPGTQMTLKTFHFAGVASMN+TLGVPRI+EI+ A KK
Sbjct: 1021 SRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEILGASKK 1080

Query: 3426 IGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKIED 3605
            I TPIITATLVCDND  SARIVKGRIEKT+LGEVAK++K+S  P +  +++ LD  +IE 
Sbjct: 1081 ISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITLDMKRIEA 1140

Query: 3606 LQMKISAYTVAQSILQHPKIKLKQQHIEI----LSPQKLKLFPPEADKYTLRFKLDSLKK 3773
            LQM I A TVA SI ++ K K+ +  +++      P KLK+  PE  +  + + L  L+ 
Sbjct: 1141 LQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILLPEIGRKEVLYSLHLLQS 1200

Query: 3774 MLLDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQ 3953
            +L  +IV+GIPTVERAVIN+   K K NLL+EGTNL AVMGTPGVDGR T SNHI+E+E 
Sbjct: 1201 LLPKIIVKGIPTVERAVINN--VKGKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEG 1258

Query: 3954 TLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVL 4133
            TLGIEAARK IIDEI+YTM++HGMSID+RHMMLLAD+MTF+G VLGI   GI KMK+SVL
Sbjct: 1259 TLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVL 1318

Query: 4134 MLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQVYNRRP 4313
            MLASFE+T + LF+A+ RGR+D I GVSECIIMG+PMQIGTGIL V+QR + +      P
Sbjct: 1319 MLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILSVQQRPEQLAKLTYGP 1378

Query: 4314 DLIM 4325
            D I+
Sbjct: 1379 DPII 1382


>XP_011627269.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Amborella trichopoda]
          Length = 1367

 Score = 1869 bits (4841), Expect = 0.0
 Identities = 948/1369 (69%), Positives = 1113/1369 (81%), Gaps = 14/1369 (1%)
 Frame = +3

Query: 216  FTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTK-KPIKQGLLDSHMG 392
            FTK+PF+ED+GP++IKS++F MLSG EI  AAE QVY+  +Y+ T  KP + G+LD+ MG
Sbjct: 10   FTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDTRMG 69

Query: 393  -PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILLMEKD 569
               K G CATC G F  CPGHFGY KL LPVF+VGYF T + +L+CICKSCARILL E++
Sbjct: 70   FSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLFEEE 129

Query: 570  RKKFLKKMRSPNEDVLQKNANAKKVVEKCKASR-CFHCGYINGAVKKAGSILAVAHDLSK 746
            RK+FLKK+R+P  ++ QKN   KKV++KCK  R C  CG  NG VKKAG    ++HD SK
Sbjct: 130  RKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKKAGPTFRISHDRSK 189

Query: 747  VPNGNFD----ECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRPE 914
                N+D    EC++AIS TK +N++F++V  LTP + LALF++M+DEDC+LL+LYDRPE
Sbjct: 190  A---NYDKLTKECKTAISQTKYSNSDFNMVENLTPQRALALFERMVDEDCDLLYLYDRPE 246

Query: 915  KLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSLG 1094
            KLI+T IAVPP  IRP+    +G+  NE+++T+KL ++++ +  L + +     P   + 
Sbjct: 247  KLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLIDHVNKGNLPQYYMD 304

Query: 1095 LWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRTV 1274
             W  LQV VA YINSE+  +PL  QP K   G++QRLKGKQGRFR NL GKRV+FTGRTV
Sbjct: 305  TWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRSNLEGKRVDFTGRTV 364

Query: 1275 ISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGSK 1454
            ISPDPNLKITEVAIP LMA++LTY ERV+ +N+EKLRQC+RNGP KYPGAN+VI+  G  
Sbjct: 365  ISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGANFVIS-GGDT 423

Query: 1455 LNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 1634
            L+L YGN+KR +DELK+G  VERHLEDG++VLFNRQPSLHRMSIM HRAR+MPWRTLRFN
Sbjct: 424  LSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRARVMPWRTLRFN 483

Query: 1635 ESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 1814
            ESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNGEILVASTQDFLTSS
Sbjct: 484  ESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSS 543

Query: 1815 FLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARMR 1994
            +LITRKDTFYDRA FSLMCSYMGDGM+ IDLPTPAL+KP+ELWTGKQLFSVLIRPHA M+
Sbjct: 544  YLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMK 603

Query: 1995 VYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRD 2174
            VY+NL+L EKNY KG +  TMC NDG+VY RNSEL+ GQLGKATLGNGNKDGLFSVLLRD
Sbjct: 604  VYVNLSLMEKNYSKGGE--TMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRD 661

Query: 2175 YGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLINR 2354
            Y +HAAASCMNRLAKLSARWIGNHGFSIGIDDV PG HL + K+ +I  GY  CD  I+ 
Sbjct: 662  YNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFIDA 721

Query: 2355 YNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSPI 2534
            Y+ G L L PGCNAAQTLE+ IT  LN IR+AAAKVCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 722  YDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSPI 781

Query: 2535 NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 2714
            NISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP N KTPAAKGFVANSFYTGLTA EFFFH
Sbjct: 782  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFFH 841

Query: 2715 TMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPA 2894
            TMGGREGLVDTAVKTA+TGY+SRRL+KSLEDLST+YD+TVRNSSG I+Q  YGDDGMDPA
Sbjct: 842  TMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPA 901

Query: 2895 NMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAAF 3074
             MEGK G+PLNLDRLFMK KAT PA+    SLSPSEI    +DRLSKHD+TPE GCS AF
Sbjct: 902  KMEGKSGVPLNLDRLFMKIKATCPAS-VSASLSPSEISTIVNDRLSKHDMTPERGCSMAF 960

Query: 3075 KESLSDFVKKSVVALRKTRRELGLDEDKVGEHV---LENVAANISGITSQQLQVYLETCI 3245
            KE LS+F+KK + A++KTR  LGLDED V +     LE+VAANISGI+ QQL+V+LETCI
Sbjct: 961  KEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRVFLETCI 1020

Query: 3246 HRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAVKK 3425
             RYHLKR+E          QSIGEPGTQMTLKTFHFAGVASMN+TLGVPRI+EI+ A KK
Sbjct: 1021 SRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEILGASKK 1080

Query: 3426 IGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKIED 3605
            I TPIITATLVCDND  SARIVKGRIEKT+LGEVAK++K+S  P +  +++ LD  +IE 
Sbjct: 1081 ISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITLDMKRIEA 1140

Query: 3606 LQMKISAYTVAQSILQHPKIKLKQQHIEI----LSPQKLKLFPPEADKYTLRFKLDSLKK 3773
            LQM I A TVA SI ++ K K+ +  +++      P KLK+  PE  +  + + L  L+ 
Sbjct: 1141 LQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILLPEIGRKEVLYSLHLLQS 1200

Query: 3774 MLLDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHIIEIEQ 3953
            +L  +IV+GIPTVERAVIN+   K K NLL+EGTNL AVMGTPGVDGR T SNHI+E+E 
Sbjct: 1201 LLPKIIVKGIPTVERAVINN--VKGKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEG 1258

Query: 3954 TLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKMKDSVL 4133
            TLGIEAARK IIDEI+YTM++HGMSID+RHMMLLAD+MTF+G VLGI   GI KMK+SVL
Sbjct: 1259 TLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVL 1318

Query: 4134 MLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQR 4280
            MLASFE+T + LF+A+ RGR+D I GVSECIIMG+PMQIGTGIL V+QR
Sbjct: 1319 MLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILSVQQR 1367


>XP_002446717.1 hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            EES11045.1 hypothetical protein SORBI_006G131200 [Sorghum
            bicolor]
          Length = 1391

 Score = 1865 bits (4831), Expect = 0.0
 Identities = 953/1396 (68%), Positives = 1115/1396 (79%), Gaps = 18/1396 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ +  Y    KP+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHDMKPVPNG 61

Query: 372  LLDSHMG-PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG P K   C+TCHG F+DCPGHFGY KL LPVFNVG+F+ I+D+LKCICKSC+R
Sbjct: 62   LLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL EKDR++FLKKMR+P  D LQK+A  KKV +KCK S C  C Y NG VKK  + L V
Sbjct: 122  VLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIV 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SKV +G+ +E ++A+ + KE   + + V VL P  VL+LF++M DEDCELL+L DR
Sbjct: 182  VHDCSKVLDGHTEELKNALQNKKE-KVSANSVRVLDPATVLSLFRRMTDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+++IAVPPV IRPSV + +   SNED IT  L  ++  ++ L+E L +  P +  
Sbjct: 241  PEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W++LQ++V  Y+NS+   +P         RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQYLQLQVVEYVNSDAPCLP-----DSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
             K +L YG+R+  + +LK G IVERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 416  MKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKDTFYDR++F+L+CSY+GD M+ IDLPTPALIKPIELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAH 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKK-----------TMCPNDGYVYFRNSELLCGQLGKATLGN 2135
             RV+LNL + EK Y K K KK           TMCPNDGYVYFRNSELL GQ+GKATLGN
Sbjct: 596  TRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 655

Query: 2136 GNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEI 2315
            GNKDGL+SVLLRDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGEHLNR KK EI
Sbjct: 656  GNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEI 715

Query: 2316 DKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSP 2495
            D GYK+C DLI+ +  G L L PGCNAAQTLE NITG LN IR  A  VCM +LHWRNSP
Sbjct: 716  DGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSP 775

Query: 2496 LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANS 2675
            LIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF++R+LPHFPINSKTPAAKGFVANS
Sbjct: 776  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANS 835

Query: 2676 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGI 2855
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN+SGGI
Sbjct: 836  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 895

Query: 2856 VQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSK 3035
            VQ LYGDDGMDPA MEGK+GMPLNLD+LFMK  AT P  R   +LSP  I +  +D+L +
Sbjct: 896  VQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCP-QRGSDTLSPEAIKQMLEDKLLQ 954

Query: 3036 HDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANISGI 3206
            HD + +GGCS  FK++L++F+ K +  ++ TRR L L ED V +    V E+VAA ISGI
Sbjct: 955  HDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGI 1014

Query: 3207 TSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLG 3386
            +++QLQV+L+TC+ RY  K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLG
Sbjct: 1015 SAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLG 1074

Query: 3387 VPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRRE 3566
            VPRI+EIINA +KI TPIITA L+   DV SARIVKG +EK +LGEVA ++++     + 
Sbjct: 1075 VPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQP 1134

Query: 3567 FVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTL 3746
             + VKLD   IE L M ISA +V  SIL HPKIKLK +H+ ++   KL+++P   DK  L
Sbjct: 1135 NLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKRKL 1194

Query: 3747 RFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKN---KYNLLIEGTNLRAVMGTPGVDGR 3917
            + +L +LK +L  VIV+GIPTVER VI+  K KN   +Y LL+EGTNL AVMGTPGVD  
Sbjct: 1195 QLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPGVDAT 1254

Query: 3918 KTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGIT 4097
            KTKSNHI+E  QTLGIEAAR+ IIDEI+YTM++HGM+ID RHMMLLAD+MT+KG++LGIT
Sbjct: 1255 KTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGIT 1314

Query: 4098 NAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQ 4277
              GIAKMK SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILKV+Q
Sbjct: 1315 RYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQ 1374

Query: 4278 RDDPVQVYNRRPDLIM 4325
            R D V  +  +PD I+
Sbjct: 1375 RLDHVPEFKYQPDPIL 1390


>XP_008669237.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Zea mays]
            ONM16380.1 DNA-directed RNA polymerase III subunit 1 [Zea
            mays]
          Length = 1394

 Score = 1864 bits (4828), Expect = 0.0
 Identities = 951/1399 (67%), Positives = 1114/1399 (79%), Gaps = 21/1399 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ +  YD    P+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRDMTPVPNG 61

Query: 372  LLDSHMG-PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG P K G C TCHG F+DCPGHFGY KL LPVFNVG+F+ I+D+LKCICKSC+R
Sbjct: 62   LLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL+EKDR++FLKKMR+P  D LQK+A  KKV +KCK S C  C Y NG VKK  + L V
Sbjct: 122  VLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIV 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SKV +G+ +E ++A+ + KE   +   V VL P  VL+LF++M+DEDCELL+L DR
Sbjct: 182  VHDCSKVLDGHTEELKNALQNKKE-KVSASSVLVLDPATVLSLFRRMIDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSV +     SNED IT  L  ++  ++ L+E L +  P +  
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W++LQ++V  Y+NS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQYLQLQVVEYVNSDAPSLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
             K +L YG+R+  + +LK G IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  MKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKDTFYDR++F+L+CSY+GDGM+ IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAH 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKK--------------TMCPNDGYVYFRNSELLCGQLGKAT 2126
             +V+LNL + EK Y K K KK              TMCPNDGYVYFRNSELL GQ+GKAT
Sbjct: 596  TKVFLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 655

Query: 2127 LGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKK 2306
            LGNGNKDGL+SVLLRDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGEHLNR KK
Sbjct: 656  LGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 715

Query: 2307 VEIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWR 2486
             EID GYK+C DLI+ +  G L L PGCNAAQTLE NITG LN IR  A  VCM +LHWR
Sbjct: 716  KEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWR 775

Query: 2487 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFV 2666
            NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF++R+LPHFPINSKTPAAKGFV
Sbjct: 776  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFV 835

Query: 2667 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSS 2846
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN+S
Sbjct: 836  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 895

Query: 2847 GGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDR 3026
            GGIVQ LYGDDGMDPA MEGK+GMPLNLD+LFMK  AT P  R   +LSP  I +  +D+
Sbjct: 896  GGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCP-QRGSDTLSPVGIKQMLEDK 954

Query: 3027 LSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANI 3197
              +HD + +GGCSA FK++L++F+ K +  ++ TRR L L ED V +    + E++AA I
Sbjct: 955  FLQHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAII 1014

Query: 3198 SGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNV 3377
            SGI+++QLQV+L+TC+ RY  K++E          QSIGEPGTQMTLKTFHFAGVASMNV
Sbjct: 1015 SGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1074

Query: 3378 TLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLP 3557
            TLGVPRI+EIINA KKI TPIITA L+   DV SARIVKG +EK +LGEVA +++     
Sbjct: 1075 TLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKS 1134

Query: 3558 RREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADK 3737
                + VKLD   IE L M ISA +V  SIL HPK+KLK +H+ ++   KL+++P   DK
Sbjct: 1135 SLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVRVIDRAKLRIYPAGTDK 1194

Query: 3738 YTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKN---KYNLLIEGTNLRAVMGTPGV 3908
              L+ +L +LK +L  VIV+GIPTVER VI+  K  N   +Y LL+EGTNL AVMGTPGV
Sbjct: 1195 LKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGV 1254

Query: 3909 DGRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVL 4088
            D RKTKSNHI+E  QTLGIEAAR+ IIDEI+YTM++HGM+ID RHMMLLAD+MT+KG++L
Sbjct: 1255 DARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEIL 1314

Query: 4089 GITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILK 4268
            GIT  GIAKMK SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILK
Sbjct: 1315 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILK 1374

Query: 4269 VKQRDDPVQVYNRRPDLIM 4325
            V+QR D V  +  +PD I+
Sbjct: 1375 VRQRLDHVPEFKYQPDPIL 1393


>XP_004976057.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Setaria
            italica]
          Length = 1397

 Score = 1855 bits (4806), Expect = 0.0
 Identities = 947/1405 (67%), Positives = 1117/1405 (79%), Gaps = 27/1405 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ S  Y+   KP+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHDMKPVPNG 61

Query: 372  LLDSHMG-------PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCI 530
            LLD  MG        LK   C+TCHG F +CPGHFGY KL LPVFNVG+F+ I+D+LKCI
Sbjct: 62   LLDMRMGLASKKDTELK---CSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCI 118

Query: 531  CKSCARILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKA 710
            CK C+R+LL EKDR++FLKKMR+P  D LQK+A  KKV +KCK + C  C Y NG VKK 
Sbjct: 119  CKGCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKLTCCPRCEYKNGVVKKG 178

Query: 711  GSILAVAHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCEL 890
               L V HD SK+ +G+ +E ++A+ H KE   +   V +L P   L+LF++M+DEDCEL
Sbjct: 179  RVGLIVIHDCSKILDGHTEELKNALQHKKE-KVSTSSVRMLDPATALSLFRRMVDEDCEL 237

Query: 891  LHLYDRPEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSA 1070
            L+L DRPEKLI+T+IAVPPV IRPSV +     SNED IT+ L  ++  ++ L+E LQ+ 
Sbjct: 238  LNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTG 297

Query: 1071 EPPSLSLGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKR 1250
               S     W+ LQ++V  ++NS+   +P     +   RG++QRLKGK GRFRGNLSGKR
Sbjct: 298  GLFSKCFDCWQQLQLQVVEFVNSDAPCLP-----ESQHRGLVQRLKGKTGRFRGNLSGKR 352

Query: 1251 VEFTGRTVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANY 1430
             E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP K+PGAN+
Sbjct: 353  TEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANF 412

Query: 1431 VITPDGSKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIM 1610
            +ITPDG+KL+L YG+R+  + +LK GY VERHLEDGD+VLFNRQPSLHRMSIMSHRARIM
Sbjct: 413  IITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 472

Query: 1611 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1790
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 473  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 532

Query: 1791 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVL 1970
            TQDFLTSSFL+TRKD FYDR++F+L+CSY+GD M+ IDLPTPALIKPIELWTGKQLFSVL
Sbjct: 533  TQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVL 592

Query: 1971 IRPHARMRVYLNLTLTEKNYDKGKDKK--------------TMCPNDGYVYFRNSELLCG 2108
            +RP+AR +V+LNL + EK Y K K+KK              TMCPNDGYVYFRNSELL G
Sbjct: 593  VRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSG 652

Query: 2109 QLGKATLGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEH 2288
            Q+GKATLGNGNKDG++SVLLRDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGEH
Sbjct: 653  QVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEH 712

Query: 2289 LNRNKKVEIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCM 2468
            LNR KK +ID+GYK+C DLI+ +  G L L PGCNAAQTLE  ITG LN IR AA  VCM
Sbjct: 713  LNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCM 772

Query: 2469 ASLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTP 2648
             +LHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFIDR+LPHFPINSKTP
Sbjct: 773  DTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTP 832

Query: 2649 AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDE 2828
            AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+
Sbjct: 833  AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQ 892

Query: 2829 TVRNSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIF 3008
            TVRN+SGGIVQ LYGDDGMDPA MEGK+G PLNLD+LFMK  AT P  R   +LSP +I 
Sbjct: 893  TVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCP-HRGLDTLSPDDIK 951

Query: 3009 KATDDRLSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLE 3179
            +  +D+L++H  + +GGCS  FKE L  F+++ +  L+ TR+ L LDE  VG++   + E
Sbjct: 952  QMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEE 1011

Query: 3180 NVAANISGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAG 3359
             +AANISGI+++QLQV+L+TC  RY+ K +E          QSIGEPGTQMTLKTFHFAG
Sbjct: 1012 IIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 1071

Query: 3360 VASMNVTLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSL 3539
            VASMNVTLGVPRI+EIINA KKI TPIIT  L+   DV SARIVKG +EK +LGEVA ++
Sbjct: 1072 VASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAI 1131

Query: 3540 KVSYLPRREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLF 3719
            K+     +  + VKLD   IE L M ISA +V  SIL HPKIKLK +H+ ++   KL+++
Sbjct: 1132 KIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIY 1191

Query: 3720 PPEADKYTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEK---NKYNLLIEGTNLRAV 3890
            P   DK  L+ +L +LK ML  VIV+GIPTVER VI+  K++    KYNLL+EGTNL AV
Sbjct: 1192 PAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAV 1251

Query: 3891 MGTPGVDGRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMT 4070
            MGTPGVD R TKSNHI+E+  TLGIEAAR+ IIDEI+YTM++HGM+ID+RHMMLLAD+MT
Sbjct: 1252 MGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMT 1311

Query: 4071 FKGQVLGITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQI 4250
            +KG+VLGIT  GIAKMK SVLMLASFEKT EHLFNAS  GR D+IEGVSECIIMGIPMQ+
Sbjct: 1312 YKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQL 1371

Query: 4251 GTGILKVKQRDDPVQVYNRRPDLIM 4325
            GTGILKV+QR D +     +PD I+
Sbjct: 1372 GTGILKVRQRLDHLPELKYQPDPIL 1396


>KQK97866.1 hypothetical protein SETIT_009186mg [Setaria italica]
          Length = 1394

 Score = 1853 bits (4801), Expect = 0.0
 Identities = 944/1399 (67%), Positives = 1114/1399 (79%), Gaps = 21/1399 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ S  Y+   KP+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHDMKPVPNG 61

Query: 372  LLDSHMGPLKGGF-CATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  M        C+TCHG F +CPGHFGY KL LPVFNVG+F+ I+D+LKCICK C+R
Sbjct: 62   LLDMRMVMTHTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL EKDR++FLKKMR+P  D LQK+A  KKV +KCK + C  C Y NG VKK    L V
Sbjct: 122  VLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKLTCCPRCEYKNGVVKKGRVGLIV 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SK+ +G+ +E ++A+ H KE   +   V +L P   L+LF++M+DEDCELL+L DR
Sbjct: 182  IHDCSKILDGHTEELKNALQHKKE-KVSTSSVRMLDPATALSLFRRMVDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSV +     SNED IT+ L  ++  ++ L+E LQ+    S  
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGGLFSKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W+ LQ++V  ++NS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQQLQLQVVEFVNSDAPCLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNL+ITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP K+PGAN++ITPDG
Sbjct: 356  TVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
            +KL+L YG+R+  + +LK GY VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 416  TKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKD FYDR++F+L+CSY+GD M+ IDLPTPALIKPIELWTGKQLFSVL+RP+AR
Sbjct: 536  SSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAR 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKK--------------TMCPNDGYVYFRNSELLCGQLGKAT 2126
             +V+LNL + EK Y K K+KK              TMCPNDGYVYFRNSELL GQ+GKAT
Sbjct: 596  TKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 655

Query: 2127 LGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKK 2306
            LGNGNKDG++SVLLRDY +HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGEHLNR KK
Sbjct: 656  LGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 715

Query: 2307 VEIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWR 2486
             +ID+GYK+C DLI+ +  G L L PGCNAAQTLE  ITG LN IR AA  VCM +LHWR
Sbjct: 716  KKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWR 775

Query: 2487 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFV 2666
            NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFIDR+LPHFPINSKTPAAKGFV
Sbjct: 776  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV 835

Query: 2667 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSS 2846
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN+S
Sbjct: 836  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 895

Query: 2847 GGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDR 3026
            GGIVQ LYGDDGMDPA MEGK+G PLNLD+LFMK  AT P  R   +LSP +I +  +D+
Sbjct: 896  GGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCP-HRGLDTLSPDDIKQMLEDK 954

Query: 3027 LSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANI 3197
            L++H  + +GGCS  FKE L  F+++ +  L+ TR+ L LDE  VG++   + E +AANI
Sbjct: 955  LTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANI 1014

Query: 3198 SGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNV 3377
            SGI+++QLQV+L+TC  RY+ K +E          QSIGEPGTQMTLKTFHFAGVASMNV
Sbjct: 1015 SGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1074

Query: 3378 TLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLP 3557
            TLGVPRI+EIINA KKI TPIIT  L+   DV SARIVKG +EK +LGEVA ++K+    
Sbjct: 1075 TLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKS 1134

Query: 3558 RREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADK 3737
             +  + VKLD   IE L M ISA +V  SIL HPKIKLK +H+ ++   KL+++P   DK
Sbjct: 1135 SQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDK 1194

Query: 3738 YTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEK---NKYNLLIEGTNLRAVMGTPGV 3908
              L+ +L +LK ML  VIV+GIPTVER VI+  K++    KYNLL+EGTNL AVMGTPGV
Sbjct: 1195 SKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPGV 1254

Query: 3909 DGRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVL 4088
            D R TKSNHI+E+  TLGIEAAR+ IIDEI+YTM++HGM+ID+RHMMLLAD+MT+KG+VL
Sbjct: 1255 DARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVL 1314

Query: 4089 GITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILK 4268
            GIT  GIAKMK SVLMLASFEKT EHLFNAS  GR D+IEGVSECIIMGIPMQ+GTGILK
Sbjct: 1315 GITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILK 1374

Query: 4269 VKQRDDPVQVYNRRPDLIM 4325
            V+QR D +     +PD I+
Sbjct: 1375 VRQRLDHLPELKYQPDPIL 1393


>ONM16376.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1389

 Score = 1851 bits (4795), Expect = 0.0
 Identities = 947/1399 (67%), Positives = 1110/1399 (79%), Gaps = 21/1399 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ +  YD    P+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRDMTPVPNG 61

Query: 372  LLDSHMG-PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG P K G C TCHG F+DCPGHFGY KL LPVFNVG+F+ I+D+LKCICKSC+R
Sbjct: 62   LLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL+EKDR++FLKKMR+P  D LQK+A  KKV +KCK S C  C Y NG VKK  + L V
Sbjct: 122  VLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIV 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SKV +G+ +E ++A+ + KE   +   V VL P  VL+LF++M+DEDCELL+L DR
Sbjct: 182  VHDCSKVLDGHTEELKNALQNKKE-KVSASSVLVLDPATVLSLFRRMIDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSV +     SNED IT  L  ++  ++ L+E L +  P +  
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W++LQ++V  Y+NS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQYLQLQVVEYVNSDAPSLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
             K +L YG+R+  + +LK G IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  MKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKDTFYDR++F+L+CSY+GDGM+ IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAH 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKK--------------TMCPNDGYVYFRNSELLCGQLGKAT 2126
             +V+LNL + EK Y K K KK              TMCPNDGYVYFRNSELL GQ+GKAT
Sbjct: 596  TKVFLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 655

Query: 2127 LGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKK 2306
            LGNGNKDGL+SVLLRDY +HAAASCMNR     AR+IGNHGFSIG+DDVQPGEHLNR KK
Sbjct: 656  LGNGNKDGLYSVLLRDYNSHAAASCMNR-----ARFIGNHGFSIGVDDVQPGEHLNRQKK 710

Query: 2307 VEIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWR 2486
             EID GYK+C DLI+ +  G L L PGCNAAQTLE NITG LN IR  A  VCM +LHWR
Sbjct: 711  KEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWR 770

Query: 2487 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFV 2666
            NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF++R+LPHFPINSKTPAAKGFV
Sbjct: 771  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFV 830

Query: 2667 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSS 2846
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN+S
Sbjct: 831  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 890

Query: 2847 GGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDR 3026
            GGIVQ LYGDDGMDPA MEGK+GMPLNLD+LFMK  AT P  R   +LSP  I +  +D+
Sbjct: 891  GGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCP-QRGSDTLSPVGIKQMLEDK 949

Query: 3027 LSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAANI 3197
              +HD + +GGCSA FK++L++F+ K +  ++ TRR L L ED V +    + E++AA I
Sbjct: 950  FLQHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAII 1009

Query: 3198 SGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNV 3377
            SGI+++QLQV+L+TC+ RY  K++E          QSIGEPGTQMTLKTFHFAGVASMNV
Sbjct: 1010 SGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1069

Query: 3378 TLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLP 3557
            TLGVPRI+EIINA KKI TPIITA L+   DV SARIVKG +EK +LGEVA +++     
Sbjct: 1070 TLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKS 1129

Query: 3558 RREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADK 3737
                + VKLD   IE L M ISA +V  SIL HPK+KLK +H+ ++   KL+++P   DK
Sbjct: 1130 SLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVRVIDRAKLRIYPAGTDK 1189

Query: 3738 YTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKN---KYNLLIEGTNLRAVMGTPGV 3908
              L+ +L +LK +L  VIV+GIPTVER VI+  K  N   +Y LL+EGTNL AVMGTPGV
Sbjct: 1190 LKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGV 1249

Query: 3909 DGRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVL 4088
            D RKTKSNHI+E  QTLGIEAAR+ IIDEI+YTM++HGM+ID RHMMLLAD+MT+KG++L
Sbjct: 1250 DARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEIL 1309

Query: 4089 GITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILK 4268
            GIT  GIAKMK SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGILK
Sbjct: 1310 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILK 1369

Query: 4269 VKQRDDPVQVYNRRPDLIM 4325
            V+QR D V  +  +PD I+
Sbjct: 1370 VRQRLDHVPEFKYQPDPIL 1388


>ONM16381.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1851 bits (4794), Expect = 0.0
 Identities = 949/1401 (67%), Positives = 1112/1401 (79%), Gaps = 23/1401 (1%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEPFIEDVG +RIKSIRFS+LSGSEI  +AEVQV+ +  YD    P+  G
Sbjct: 2    AKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRDMTPVPNG 61

Query: 372  LLDSHMG-PLKGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG P K G C TCHG F+DCPGHFGY KL LPVFNVG+F+ I+D+LKCICKSC+R
Sbjct: 62   LLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYINGAVKKAGSILAV 728
            +LL+EKDR++FLKKMR+P  D LQK+A  KKV +KCK S C  C Y NG VKK  + L V
Sbjct: 122  VLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIV 181

Query: 729  AHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDR 908
             HD SKV +G+ +E ++A+ + KE   +   V VL P  VL+LF++M+DEDCELL+L DR
Sbjct: 182  VHDCSKVLDGHTEELKNALQNKKE-KVSASSVLVLDPATVLSLFRRMIDEDCELLNLGDR 240

Query: 909  PEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLS 1088
            PEKLI+T+IAVPPV IRPSV +     SNED IT  L  ++  ++ L+E L +  P +  
Sbjct: 241  PEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC 300

Query: 1089 LGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGR 1268
               W++LQ++V  Y+NS+   +P     +   RG++QRLKGK GRFRGNLSGKR E+TGR
Sbjct: 301  FDCWQYLQLQVVEYVNSDAPSLP-----ESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 355

Query: 1269 TVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDG 1448
            TVISPDPNLKITEVAIP+LMA+VLTYPERVS YN+EKLRQCIRNGP KYPGAN+V  PDG
Sbjct: 356  TVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDG 415

Query: 1449 SKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLR 1628
             K +L YG+R+  + +LK G IVERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLR
Sbjct: 416  MKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 475

Query: 1629 FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1808
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 476  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 535

Query: 1809 SSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHAR 1988
            SSFL+TRKDTFYDR++F+L+CSY+GDGM+ IDLPTPALIKP+ELWTGKQLFSVL+RP+A 
Sbjct: 536  SSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAH 595

Query: 1989 MRVYLNLTLTEKNYDKGKDKK--------------TMCPNDGYVYFRNSELLCGQLGKAT 2126
             +V+LNL + EK Y K K KK              TMCPNDGYVYFRNSELL GQ+GKAT
Sbjct: 596  TKVFLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 655

Query: 2127 LG--NGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRN 2300
            LG  NGNKDGL+SVLLRDY +HAAASCMNRLAK   R+IGNHGFSIG+DDVQPGEHLNR 
Sbjct: 656  LGNCNGNKDGLYSVLLRDYNSHAAASCMNRLAKF--RFIGNHGFSIGVDDVQPGEHLNRQ 713

Query: 2301 KKVEIDKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLH 2480
            KK EID GYK+C DLI+ +  G L L PGCNAAQTLE NITG LN IR  A  VCM +LH
Sbjct: 714  KKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLH 773

Query: 2481 WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKG 2660
            WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF++R+LPHFPINSKTPAAKG
Sbjct: 774  WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKG 833

Query: 2661 FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRN 2840
            FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD+TVRN
Sbjct: 834  FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRN 893

Query: 2841 SSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATD 3020
            +SGGIVQ LYGDDGMDPA MEGK+GMPLNLD+LFMK  AT P  R   +LSP  I +  +
Sbjct: 894  ASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCP-QRGSDTLSPVGIKQMLE 952

Query: 3021 DRLSKHDVTPEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGEH---VLENVAA 3191
            D+  +HD + +GGCSA FK++L++F+ K +  ++ TRR L L ED V +    + E++AA
Sbjct: 953  DKFLQHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAA 1012

Query: 3192 NISGITSQQLQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASM 3371
             ISGI+++QLQV+L+TC+ RY  K++E          QSIGEPGTQMTLKTFHFAGVASM
Sbjct: 1013 IISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1072

Query: 3372 NVTLGVPRIREIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSY 3551
            NVTLGVPRI+EIINA KKI TPIITA L+   DV SARIVKG +EK +LGEVA +++   
Sbjct: 1073 NVTLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVL 1132

Query: 3552 LPRREFVSVKLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEA 3731
                  + VKLD   IE L M ISA +V  SIL HPK+KLK +H+ ++   KL+++P   
Sbjct: 1133 KSSLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVRVIDRAKLRIYPAGT 1192

Query: 3732 DKYTLRFKLDSLKKMLLDVIVEGIPTVERAVINHDKEKN---KYNLLIEGTNLRAVMGTP 3902
            DK  L+ +L +LK +L  VIV+GIPTVER VI+  K  N   +Y LL+EGTNL AVMGTP
Sbjct: 1193 DKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTP 1252

Query: 3903 GVDGRKTKSNHIIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQ 4082
            GVD RKTKSNHI+E  QTLGIEAAR+ IIDEI+YTM++HGM+ID RHMMLLAD+MT+KG+
Sbjct: 1253 GVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGE 1312

Query: 4083 VLGITNAGIAKMKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGI 4262
            +LGIT  GIAKMK SVLMLASFEKT EHLFNAS  GR DQIEGVSECIIMGIPMQ+GTGI
Sbjct: 1313 ILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGI 1372

Query: 4263 LKVKQRDDPVQVYNRRPDLIM 4325
            LKV+QR D V  +  +PD I+
Sbjct: 1373 LKVRQRLDHVPEFKYQPDPIL 1393


>OAY83936.1 DNA-directed RNA polymerase III subunit 1 [Ananas comosus]
          Length = 1412

 Score = 1843 bits (4773), Expect = 0.0
 Identities = 952/1389 (68%), Positives = 1092/1389 (78%), Gaps = 11/1389 (0%)
 Frame = +3

Query: 192  AMADEKPLFTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQG 371
            A  +EK   TKEP+IEDVG ++IKSIRF+ LS  EI  +AEVQV+ +  Y    +P++ G
Sbjct: 2    APVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYGNDLQPVENG 61

Query: 372  LLDSHMGPLKGGF-CATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCAR 548
            LLD  MG       CATCHG FT+CPGHFGY KLTLPVFNVGYFS I+DILKCICK+C+R
Sbjct: 62   LLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSFILDILKCICKTCSR 121

Query: 549  ILLMEKDRKKFLKKMRSPNEDVLQKNANAKKVVEKCKASRCFHCGYIN-------GAVKK 707
            ILL E+DR++FL+KMR+P  D LQKNA  KK+ +KCK  RC  CG  N       G VKK
Sbjct: 122  ILLPEEDRREFLRKMRNPRTDALQKNALMKKIRDKCKMFRCPRCGSSNVYIIGNTGVVKK 181

Query: 708  AGSILAVAHDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCE 887
            A + LA+A   +K  + + +E RSA+SH K+  + F   +V+TP    ALFK+MLDEDCE
Sbjct: 182  ARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQS-FQAAHVITPGAAFALFKRMLDEDCE 240

Query: 888  LLHLYDRPEKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQS 1067
            LL LYDRPEKLI+T+IAVPP  IRPS F+  G  SNED ITS L  +I  ++ L+EDL+ 
Sbjct: 241  LLDLYDRPEKLIVTEIAVPPAPIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEG 300

Query: 1068 AEPPSLSLGLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGK 1247
              P S  +  W HLQ++V  YINS+   VP     +   RG++QRLKGKQGRFRGNLSGK
Sbjct: 301  GAPASKCIDCWTHLQIQVVEYINSDSPSVP-----ESKHRGLIQRLKGKQGRFRGNLSGK 355

Query: 1248 RVEFTGRTVISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGAN 1427
            RVE+TGRTVISPDPNLKITEVAIP+LMA VLTYPERVSYYN+EKLRQCI NGP KYPGAN
Sbjct: 356  RVEYTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGAN 415

Query: 1428 YVITPDGSKLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARI 1607
            +V  PDGS  +L Y N+K ++++LKYG IVERHLEDGD+                  ARI
Sbjct: 416  FVQKPDGSTTHLKYVNKKIVANDLKYGDIVERHLEDGDI------------------ARI 457

Query: 1608 MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1787
            MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA
Sbjct: 458  MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 517

Query: 1788 STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSV 1967
            STQDFLTSSFLITRKDTFYDRA FSLMCS+MGD MD IDLPTPALIKP+ELWTGKQLFSV
Sbjct: 518  STQDFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSV 577

Query: 1968 LIRPHARMRVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKD 2147
            L+RP+A  RV+LNLT+ EK Y    D +TMCP DGYVYFRNSEL+ GQLGK TLGNGNKD
Sbjct: 578  LVRPNACTRVFLNLTVKEKIYT---DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKD 634

Query: 2148 GLFSVLLRDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGY 2327
            GLFSVLLRDY +HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE+LN+ KK +ID+GY
Sbjct: 635  GLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKRKIDEGY 694

Query: 2328 KECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMS 2507
            +EC + I+ Y+ G L   PG NAAQTLE  IT  LN IR  A  VCM +LHWRNSPLIMS
Sbjct: 695  RECHEHISSYSKGQLACEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMS 754

Query: 2508 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTG 2687
            QCGSKGS INISQMVACVGQQSVGGRRAPNGFIDR+LPHFPINSKTPAAKGFVANSFYTG
Sbjct: 755  QCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTG 814

Query: 2688 LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLL 2867
            LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL+KSLEDLS +YD+TVRN+S GIVQ L
Sbjct: 815  LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFL 874

Query: 2868 YGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVT 3047
            YGDDGMDPA MEGK+G+PLNL +LFMK  AT P  R   +LSPSEI +  DDRLSKHD++
Sbjct: 875  YGDDGMDPAKMEGKDGIPLNLSQLFMKVMATCP-HRVLDTLSPSEILQIMDDRLSKHDMS 933

Query: 3048 PEGGCSAAFKESLSDFVKKSVVALRKTRRELGLDEDKVGE---HVLENVAANISGITSQQ 3218
            PEGGCSAAFK+ L+DFV   VV +R TRR L LDED   +    + E +AANISGI+S+Q
Sbjct: 934  PEGGCSAAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQ 993

Query: 3219 LQVYLETCIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 3398
            LQV+L+TCI RYH K++E          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 994  LQVFLDTCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1053

Query: 3399 REIINAVKKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSV 3578
            REIINA K I TPIITA L+ D D  SA IVKG IEKT+LGEVAK++++     R ++SV
Sbjct: 1054 REIINAAKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISV 1113

Query: 3579 KLDKAKIEDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKL 3758
            KLD   I+ L M+ISA +V  SIL HPKIKLK +HI IL   KL+++ PEADK  L+F L
Sbjct: 1114 KLDMGLIKALHMRISADSVQLSILNHPKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSL 1173

Query: 3759 DSLKKMLLDVIVEGIPTVERAVINHDKEKNKYNLLIEGTNLRAVMGTPGVDGRKTKSNHI 3938
             SLK ML  VIV+GIPT ER VI+  K+   Y L IEGTNL AVMGTPG+D R TK NH+
Sbjct: 1174 HSLKAMLPKVIVKGIPTAERVVIDKTKQ-GIYKLFIEGTNLLAVMGTPGIDARNTKINHV 1232

Query: 3939 IEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAKM 4118
            IE+ +TLG+EAAR+ I+DEI  TM+ HGMSID RHMMLLAD+MT+KG+VLGIT  GIAKM
Sbjct: 1233 IEVHETLGVEAARQSIVDEIHDTMRNHGMSIDKRHMMLLADLMTYKGEVLGITRFGIAKM 1292

Query: 4119 KDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQV 4298
            K SVLMLASFEKT EHLFNAS  GR D+I GVSECIIMGIPM++GTG LKVKQR + +  
Sbjct: 1293 KTSVLMLASFEKTAEHLFNASYSGREDKIHGVSECIIMGIPMRLGTGFLKVKQRLEQIPD 1352

Query: 4299 YNRRPDLIM 4325
            +   P  ++
Sbjct: 1353 FKYVPGPVL 1361


>XP_009800353.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] XP_009800354.1 PREDICTED: DNA-directed RNA
            polymerase III subunit rpc1 [Nicotiana sylvestris]
          Length = 1390

 Score = 1834 bits (4751), Expect = 0.0
 Identities = 926/1389 (66%), Positives = 1114/1389 (80%), Gaps = 21/1389 (1%)
 Frame = +3

Query: 216  FTKEPFIEDVGPQRIKSIRFSMLSGSEICSAAEVQVYQSGFYDPTKKPIKQGLLDSHMGP 395
            FTKEP+IEDVGP++IKSI+FS+ S  EI    EV+VY+  +YD TKKPI  GLLD  MGP
Sbjct: 10   FTKEPYIEDVGPRKIKSIQFSLFSEVEILKLGEVEVYRGVYYDSTKKPIPNGLLDPRMGP 69

Query: 396  L-KGGFCATCHGSFTDCPGHFGYYKLTLPVFNVGYFSTIVDILKCICKSCARILLMEKDR 572
              K G C TCHG+F +CPGH+GY  LTLPV+NVGY  T+VD+LKCICK C+ ILL +K+R
Sbjct: 70   PNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSILLDDKER 129

Query: 573  KKFLKKMRSPNEDVLQKNANAKKVVEKC-------KASRCFHCGYINGAVKKAGSILAVA 731
            + FLKKMR+P  + L K+   KKVV+KC       K+  C  CGY+NG VKK    L + 
Sbjct: 130  RVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKSVTCSKCGYMNGMVKKGQ--LKII 187

Query: 732  HDLSKVPNGNFDECRSAISHTKEANANFHIVNVLTPVKVLALFKKMLDEDCELLHLYDRP 911
            H+     N   DE  +AISH  +   +  +   + P  V +LFK M DEDCELL+L DRP
Sbjct: 188  HERG---NRFLDEFNAAISHKIDLKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYLSDRP 244

Query: 912  EKLIMTDIAVPPVAIRPSVFMDAGAMSNEDDITSKLAQVIKASAKLQEDLQSAEPPSLSL 1091
            EKL++T I VPP+AIRPSVF+D G  SNE+DIT +L ++I+ +A+L ED+      + SL
Sbjct: 245  EKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQENARLLEDISDTSFQNKSL 304

Query: 1092 GLWEHLQVEVATYINSEVRGVPLYMQPQKPLRGVLQRLKGKQGRFRGNLSGKRVEFTGRT 1271
              W  LQ+EVA YINS+VRGVPL++Q  KP+ G  QRLKGKQGRFRGNLSGKRVE+TGRT
Sbjct: 305  NAWVGLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGKRVEYTGRT 364

Query: 1272 VISPDPNLKITEVAIPILMAKVLTYPERVSYYNMEKLRQCIRNGPQKYPGANYVITPDGS 1451
            VISPDPNLKITEVAIPILMA++LTYPERVS +N+EKLRQC+RNGP KYPGA ++  PDG+
Sbjct: 365  VISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKHPDGT 424

Query: 1452 KLNLAYGNRKRLSDELKYGYIVERHLEDGDLVLFNRQPSLHRMSIMSHRARIMPWRTLRF 1631
            +++L + +RKR +DELK+GYIV+RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLRF
Sbjct: 425  EISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 484

Query: 1632 NESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 1811
            NESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTS
Sbjct: 485  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 544

Query: 1812 SFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPTPALIKPIELWTGKQLFSVLIRPHARM 1991
            SFLITRKDTFYDRA+FSL+CSYMGDGMDPIDLPTPALIKP+ELWTGKQLF VL+RP+++M
Sbjct: 545  SFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRPYSKM 604

Query: 1992 RVYLNLTLTEKNYDKGKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLR 2171
            RVY+NLT+TEK+Y  GK  +TMCP+DG+VYFRNSEL+ GQLGKATLGNGNKDGL+SVLLR
Sbjct: 605  RVYVNLTVTEKSY-SGKG-ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLR 662

Query: 2172 DYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKVEIDKGYKECDDLIN 2351
            DY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE+L + K+ EI + YK+C+D I 
Sbjct: 663  DYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQEEIYQNYKKCEDRIQ 722

Query: 2352 RYNTGGLKLLPGCNAAQTLESNITGKLNNIREAAAKVCMASLHWRNSPLIMSQCGSKGSP 2531
            ++N G L + PGC+AAQTLE+ +T  LN +R+   K+CM +LHWRNSPLIMSQCGSKGSP
Sbjct: 723  QFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKALHWRNSPLIMSQCGSKGSP 782

Query: 2532 INISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPAAKGFVANSFYTGLTATEFFF 2711
            INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP  SK PAAKGFVA+SF+ GL+ATEFFF
Sbjct: 783  INISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFFF 842

Query: 2712 HTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDP 2891
            HTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD TVRN+S  I+Q +YGDDGMDP
Sbjct: 843  HTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYGDDGMDP 902

Query: 2892 ANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEIFKATDDRLSKHDVTPEGGCSAA 3071
            + ME K+G PLN  RLFMK KAT P  R    LS SEI +  ++RLS HD++PEGGCS A
Sbjct: 903  SQMEEKKGRPLNFSRLFMKVKATCP-PRGEKGLSYSEICEIVNERLSYHDMSPEGGCSEA 961

Query: 3072 FKESLSDFVKKSVV-ALRKTRRELGLDEDKVG---EHVLENVAANISGITSQQLQVYLET 3239
            F+ SLSDF+ K++   L++ R  L L E++        LENVA NISGIT +QLQV+L  
Sbjct: 962  FRASLSDFLIKNLAETLKRLREALLLGEEQYAGGDREYLENVALNISGITKKQLQVFLNM 1021

Query: 3240 CIHRYHLKRLEXXXXXXXXXXQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAV 3419
            CI RYHLKRLE          QSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA 
Sbjct: 1022 CISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1081

Query: 3420 KKIGTPIITATLVCDNDVHSARIVKGRIEKTILGEVAKSLKVSYLPRREFVSVKLDKAKI 3599
            KKI TPIITA L+   ++ +AR++K RIEKT+LG+VAKS+K+    R   +++ LD   I
Sbjct: 1082 KKINTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETI 1141

Query: 3600 EDLQMKISAYTVAQSILQHPKIKLKQQHIEILSPQKLKLFPPEADKYTLRFKLDSLKKML 3779
            +  Q+ I AYTV QSILQ PKIKLK+Q +++L+P+KL++F P+A+K  L F+L  LK  L
Sbjct: 1142 QVSQLCIDAYTVKQSILQTPKIKLKEQQVKVLNPRKLEVF-PQANKDKLHFELHRLKNKL 1200

Query: 3780 LDVIVEGIPTVERAVINHDKEKNK--------YNLLIEGTNLRAVMGTPGVDGRKTKSNH 3935
              V+V+GI TV+RAV+N ++E+++        Y LL+EGT L AVMG  GVDGR TKSNH
Sbjct: 1201 PAVVVKGITTVQRAVVNKEQERDRKSDVKGETYELLVEGTGLLAVMGIDGVDGRNTKSNH 1260

Query: 3936 IIEIEQTLGIEAARKCIIDEIKYTMQTHGMSIDIRHMMLLADVMTFKGQVLGITNAGIAK 4115
            I+E++Q LGIEAAR  IIDEI YTM +HGM+ID+RHMMLLAD+MT+KG+VLGIT  G+ K
Sbjct: 1261 IMEVQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQK 1320

Query: 4116 MKDSVLMLASFEKTGEHLFNASIRGRIDQIEGVSECIIMGIPMQIGTGILKVKQRDDPVQ 4295
            MKDSVLMLASFEKT +HLF+AS+ GR D+IEGVSECIIMGIPMQIGTG+ K++Q    V+
Sbjct: 1321 MKDSVLMLASFEKTTDHLFSASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVE 1380

Query: 4296 V-YNRRPDL 4319
            + Y   P L
Sbjct: 1381 LNYQSEPML 1389