BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00008196
         (2074 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   637   0.0  
XP_010241843.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   637   0.0  
XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   617   0.0  
XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   603   0.0  
XP_010907040.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   566   0.0  
XP_007027376.2 PREDICTED: RNA polymerase sigma factor sigF, chlo...   564   0.0  
JAT66457.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]      565   0.0  
CBI32760.3 unnamed protein product, partial [Vitis vinifera]          563   0.0  
XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   563   0.0  
XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   563   0.0  
EOY07878.1 RNA polymerase sigma factor rpoD, putative [Theobroma...   562   0.0  
XP_008243975.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   558   0.0  
ONK72278.1 uncharacterized protein A4U43_C04F17680 [Asparagus of...   557   0.0  
XP_020085184.1 RNA polymerase sigma factor sigF, chloroplastic i...   555   0.0  
ONI03022.1 hypothetical protein PRUPE_6G234100 [Prunus persica]       553   0.0  
ONI03024.1 hypothetical protein PRUPE_6G234100 [Prunus persica]       553   0.0  
XP_009384040.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   551   0.0  
ERM94834.1 hypothetical protein AMTR_s00009p00072720 [Amborella ...   546   0.0  
XP_011624483.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   546   0.0  
XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   542   0.0  

>XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nelumbo nucifera]
          Length = 565

 Score =  637 bits (1644), Expect = 0.0
 Identities = 344/580 (59%), Positives = 399/580 (68%), Gaps = 1/580 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            ME GR ++SS S+  P+T L  S SSSV ++HEQ  P V SMPTTSI  HFPASVLLQEQ
Sbjct: 1    MEVGRNLVSSASLFPPRTQLKNS-SSSVTLLHEQANPIVVSMPTTSITRHFPASVLLQEQ 59

Query: 271  RDDFRP-LHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWY 447
            RDD RP L I REDKTS A LDRR++E  V  +EEK+S Q D+Y + FERQLLYWPG WY
Sbjct: 60   RDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKKSCQPDRYWEGFERQLLYWPGLWY 119

Query: 448  XXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXX 627
                             +  A  T   +D+             RP D             
Sbjct: 120  LLPSLYKGEKPLLSMVTQSTAAGTVKNVDV-------------RPCDALELAKKAVLASK 166

Query: 628  XXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXX 807
                   D     AD  ES +  L                                    
Sbjct: 167  QAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPRPK 226

Query: 808  XXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKL 987
              ++ E S+S+  +  KKI+  FD NDPLRLFLWGPETKQLLT KEES+LFV +QEL++L
Sbjct: 227  VVVS-EASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRL 285

Query: 988  EEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQY 1167
            EEVKQRLQSQFDREPTLVEWAEA+GM+C+ LQS L+SGN SREK+IYANFRLVVHVAK Y
Sbjct: 286  EEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHY 345

Query: 1168 QGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPE 1347
            QG+GL LQDLLQEGSMGLMKSLEKFKPQAGCRF+TYAYWWIRQ+IRKAI QNSRTIRLPE
Sbjct: 346  QGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPE 405

Query: 1348 NVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQ 1527
            NVY LL++++ A+K +IQEGH PTNEELAK VGITVEK E L +STR+P+SIQQP W DQ
Sbjct: 406  NVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQ 465

Query: 1528 DVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSN 1707
            D TFQE+TAD  VE PDL V KQLMRRH+RNL+SIL P+ER+II+ RYGI + E KSL  
Sbjct: 466  DTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQE 525

Query: 1708 IGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            IG+++GLSKERVRQ+ESRAL KLKQCLSSQGL AY  LL+
Sbjct: 526  IGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 565


>XP_010241843.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 568

 Score =  637 bits (1642), Expect = 0.0
 Identities = 343/582 (58%), Positives = 399/582 (68%), Gaps = 3/582 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVP--MIHEQPAPAVTSMPTTSIAHHFPASVLLQ 264
            ME GR ++SS S+  P+T L  S SS +P  ++HEQ  P V SMPTTSI  HFPASVLLQ
Sbjct: 1    MEVGRNLVSSASLFPPRTQLKNSSSSGMPVTLLHEQANPIVVSMPTTSITRHFPASVLLQ 60

Query: 265  EQRDDFRP-LHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGF 441
            EQRDD RP L I REDKTS A LDRR++E  V  +EEK+S Q D+Y + FERQLLYWPG 
Sbjct: 61   EQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKKSCQPDRYWEGFERQLLYWPGL 120

Query: 442  WYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXX 621
            WY                 +  A  T   +D+             RP D           
Sbjct: 121  WYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDV-------------RPCDALELAKKAVLA 167

Query: 622  XXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXX 801
                     D     AD  ES +  L                                  
Sbjct: 168  SKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPR 227

Query: 802  XXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELM 981
                ++ E S+S+  +  KKI+  FD NDPLRLFLWGPETKQLLT KEES+LFV +QEL+
Sbjct: 228  PKVVVS-EASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELI 286

Query: 982  KLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAK 1161
            +LEEVKQRLQSQFDREPTLVEWAEA+GM+C+ LQS L+SGN SREK+IYANFRLVVHVAK
Sbjct: 287  RLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAK 346

Query: 1162 QYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRL 1341
             YQG+GL LQDLLQEGSMGLMKSLEKFKPQAGCRF+TYAYWWIRQ+IRKAI QNSRTIRL
Sbjct: 347  HYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRL 406

Query: 1342 PENVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWI 1521
            PENVY LL++++ A+K +IQEGH PTNEELAK VGITVEK E L +STR+P+SIQQP W 
Sbjct: 407  PENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWA 466

Query: 1522 DQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSL 1701
            DQD TFQE+TAD  VE PDL V KQLMRRH+RNL+SIL P+ER+II+ RYGI + E KSL
Sbjct: 467  DQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSL 526

Query: 1702 SNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
              IG+++GLSKERVRQ+ESRAL KLKQCLSSQGL AY  LL+
Sbjct: 527  QEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 568


>XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
            [Nelumbo nucifera]
          Length = 540

 Score =  617 bits (1590), Expect = 0.0
 Identities = 330/553 (59%), Positives = 381/553 (68%), Gaps = 1/553 (0%)
 Frame = +1

Query: 172  VPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQRDDFRP-LHIGREDKTSPATLDRRRIE 348
            V ++HEQ  P V SMPTTSI  HFPASVLLQEQRDD RP L I REDKTS A LDRR++E
Sbjct: 2    VTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLE 61

Query: 349  SGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNV 528
              V  +EEK+S Q D+Y + FERQLLYWPG WY                 +  A  T   
Sbjct: 62   DKVHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKN 121

Query: 529  LDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXXXXXXXXXDCNFLSADLDESLISGLXXX 708
            +D+             RP D                    D     AD  ES +  L   
Sbjct: 122  VDV-------------RPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPR 168

Query: 709  XXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXITHEVSSSKAIEKGKKINYDFDPND 888
                                               ++ E S+S+  +  KKI+  FD ND
Sbjct: 169  NLANKIPLREEVAVRSKRLLERQSKRRWIPRPKVVVS-EASTSRKSDIHKKIHEGFDTND 227

Query: 889  PLRLFLWGPETKQLLTGKEESDLFVQIQELMKLEEVKQRLQSQFDREPTLVEWAEAIGMS 1068
            PLRLFLWGPETKQLLT KEES+LFV +QEL++LEEVKQRLQSQFDREPTLVEWAEA+GM+
Sbjct: 228  PLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMT 287

Query: 1069 CRDLQSRLYSGNRSREKMIYANFRLVVHVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKP 1248
            C+ LQS L+SGN SREK+IYANFRLVVHVAK YQG+GL LQDLLQEGSMGLMKSLEKFKP
Sbjct: 288  CQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKP 347

Query: 1249 QAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPENVYGLLTKIRNARKSYIQEGHRPTNEE 1428
            QAGCRF+TYAYWWIRQ+IRKAI QNSRTIRLPENVY LL++++ A+K +IQEGH PTNEE
Sbjct: 348  QAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEE 407

Query: 1429 LAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRR 1608
            LAK VGITVEK E L +STR+P+SIQQP W DQD TFQE+TAD  VE PDL V KQLMRR
Sbjct: 408  LAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRR 467

Query: 1609 HMRNLLSILTPRERQIIQFRYGIHDGERKSLSNIGALYGLSKERVRQVESRALDKLKQCL 1788
            H+RNL+SIL P+ER+II+ RYGI + E KSL  IG+++GLSKERVRQ+ESRAL KLKQCL
Sbjct: 468  HVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCL 527

Query: 1789 SSQGLEAYVSLLI 1827
            SSQGL AY  LL+
Sbjct: 528  SSQGLGAYADLLV 540


>XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X4
            [Nelumbo nucifera]
          Length = 525

 Score =  603 bits (1554), Expect = 0.0
 Identities = 323/539 (59%), Positives = 372/539 (69%), Gaps = 1/539 (0%)
 Frame = +1

Query: 214  MPTTSIAHHFPASVLLQEQRDDFRP-LHIGREDKTSPATLDRRRIESGVAFFEEKRSYQY 390
            MPTTSI  HFPASVLLQEQRDD RP L I REDKTS A LDRR++E  V  +EEK+S Q 
Sbjct: 1    MPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKKSCQP 60

Query: 391  DQYIKDFERQLLYWPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPN 570
            D+Y + FERQLLYWPG WY                 +  A  T   +D+           
Sbjct: 61   DRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDV----------- 109

Query: 571  SMRPWDVXXXXXXXXXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTX 750
              RP D                    D     AD  ES +  L                 
Sbjct: 110  --RPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAV 167

Query: 751  XXXXXXXXXXXXXXXXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQL 930
                                 ++ E S+S+  +  KKI+  FD NDPLRLFLWGPETKQL
Sbjct: 168  RSKRLLERQSKRRWIPRPKVVVS-EASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQL 226

Query: 931  LTGKEESDLFVQIQELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRS 1110
            LT KEES+LFV +QEL++LEEVKQRLQSQFDREPTLVEWAEA+GM+C+ LQS L+SGN S
Sbjct: 227  LTPKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSS 286

Query: 1111 REKMIYANFRLVVHVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWI 1290
            REK+IYANFRLVVHVAK YQG+GL LQDLLQEGSMGLMKSLEKFKPQAGCRF+TYAYWWI
Sbjct: 287  REKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWI 346

Query: 1291 RQSIRKAIVQNSRTIRLPENVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEM 1470
            RQ+IRKAI QNSRTIRLPENVY LL++++ A+K +IQEGH PTNEELAK VGITVEK E 
Sbjct: 347  RQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLER 406

Query: 1471 LRLSTRIPVSIQQPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRER 1650
            L +STR+P+SIQQP W DQD TFQE+TAD  VE PDL V KQLMRRH+RNL+SIL P+ER
Sbjct: 407  LFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKER 466

Query: 1651 QIIQFRYGIHDGERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            +II+ RYGI + E KSL  IG+++GLSKERVRQ+ESRAL KLKQCLSSQGL AY  LL+
Sbjct: 467  RIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 525


>XP_010907040.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
            guineensis]
          Length = 570

 Score =  566 bits (1459), Expect = 0.0
 Identities = 306/580 (52%), Positives = 387/580 (66%), Gaps = 1/580 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            MEAGRR+++SP  +  +THL     +SVPM+H+Q +   TS+PTT IA HFP SVL  EQ
Sbjct: 1    MEAGRRLLASPPPNPTRTHLRNRSPTSVPMLHDQASWTNTSVPTTPIACHFPISVLSHEQ 60

Query: 271  RDDFRPLHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWYX 450
             DD++   I +E+K      D +++ SG + +EEK   ++ QY++  ++QLLY   FWY 
Sbjct: 61   HDDYKTNCISKEEKN---VQDNQQVRSGRSCYEEKEKCEFAQYLRYSKQQLLYHQVFWYP 117

Query: 451  XXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXXX 630
                           +EPI +D+  V         +N  + +RP +V             
Sbjct: 118  FLSLYTEEKTPLAMAVEPIKSDSKGVQ-------LENCADFVRPTEVLALAKRAMMASRK 170

Query: 631  XXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXX 810
                  + N L+A+ DES    L                                     
Sbjct: 171  AASLMEESNILAAEFDESHFLSLNHRGSTVDISIKEVMAVRSKRLLERRSKKRKVGKNSN 230

Query: 811  XITHEVSSSKAIEKGKKINYDF-DPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKL 987
             +  EVS     +  +KI+    + NDPLRLFLWGPETKQLLT KEE DLFVQIQ++++L
Sbjct: 231  NVAREVSKLMTSDMKEKIDKGLINQNDPLRLFLWGPETKQLLTVKEEKDLFVQIQDVVRL 290

Query: 988  EEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQY 1167
            EEV+QRL+ QFDREPTL EWA+A+GMSC+ LQS L SG RSREKMI AN RLVVHVAKQY
Sbjct: 291  EEVQQRLRLQFDREPTLSEWAKAVGMSCQVLQSCLSSGKRSREKMINANLRLVVHVAKQY 350

Query: 1168 QGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPE 1347
            +G+GL +QDLLQEGS GLMKSLEKFKP+AGCRF+TYAYWWIRQSIR+AI  NSR IRLPE
Sbjct: 351  EGKGLSVQDLLQEGSRGLMKSLEKFKPKAGCRFATYAYWWIRQSIRRAIFLNSRVIRLPE 410

Query: 1348 NVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQ 1527
            NV+GLL +I+NAR+ +IQEGH PTNEE+AK VGI+VEK E L L+TR P+SIQ+  W DQ
Sbjct: 411  NVFGLLKRIKNARRLFIQEGHAPTNEEIAKRVGISVEKLEALLLTTRNPISIQECVWTDQ 470

Query: 1528 DVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSN 1707
            DV FQE+TADP VE P+LS+ KQ+MR+H+R LL IL PRERQIIQ+R+GI + E+KSL+ 
Sbjct: 471  DVKFQEITADPGVETPELSIAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNEQKSLTE 530

Query: 1708 IGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            IGA++GLSKERVRQ+ESRALDKLK CL S GL AY+ LL+
Sbjct: 531  IGAMFGLSKERVRQLESRALDKLKGCLPSHGLGAYLELLL 570


>XP_007027376.2 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Theobroma
            cacao]
          Length = 568

 Score =  564 bits (1454), Expect = 0.0
 Identities = 304/587 (51%), Positives = 387/587 (65%), Gaps = 8/587 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSL----SSSVPMIHEQPAPAVTSMPTTSIAHHFPASVL 258
            MEA R ++SSP     +T L  S+    SSSV M HEQ APA TS+P TS+A HFP SVL
Sbjct: 1    MEAARNLLSSPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60

Query: 259  LQEQRDDFRPL---HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLY 429
            LQEQRDD+RPL   H  +EDK  P   D+++IE+G +  EE  S  + Q    FE++LL 
Sbjct: 61   LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQL--GFEKKLLQ 118

Query: 430  WPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXX 609
            WP                    M+ +A DT  ++D++P  +   +  ++           
Sbjct: 119  WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASLSE 178

Query: 610  XXXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXX 789
                             L  DLD+SL + L                              
Sbjct: 179  D----------------LKLDLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKR 222

Query: 790  XXXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                    I  E  SS+  +  +K++  FDPNDPLRLFLWGPETKQLLT KEES+L  Q+
Sbjct: 223  RRVQPKVTI-RETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQV 281

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            Q LM+LE+VK +LQSQF REPTLVEWAEAIG+ C  LQ+ L+SGN SR+K+IYAN R+VV
Sbjct: 282  QNLMRLEKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVV 341

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            H+AKQYQ RGL LQDLLQEGSMGLMKS+E+FKPQ GCRF+TYAYWWIRQ+IRK+I+Q+SR
Sbjct: 342  HIAKQYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSR 401

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQ 1506
            T+RLPENV+ LL+K+ +A+KSYI+EG H P+ EELA+ VGITVEK + L  +TR+P+S+Q
Sbjct: 402  TVRLPENVHTLLSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQ 461

Query: 1507 QPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDG 1686
            Q  W+DQD+TFQEVT D  +E PD+SV KQLMR+H+RNLLS+L+PRER II+ R+GI + 
Sbjct: 462  QSVWVDQDITFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEES 521

Query: 1687 ERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            +  SLS IG ++GLSKERVRQ+ESRAL KLKQCL+  GL AYV LL+
Sbjct: 522  KENSLSEIGNMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568


>JAT66457.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]
          Length = 580

 Score =  565 bits (1455), Expect = 0.0
 Identities = 317/585 (54%), Positives = 385/585 (65%), Gaps = 6/585 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPS----IHRPKTHLTVSLSSS--VPMIHEQPAPAVTSMPTTSIAHHFPAS 252
            MEAGR +IS  S     H P+THL  +  S   VP +H Q + AVTSMP TS+   FPAS
Sbjct: 1    MEAGRGLISQLSPPSTSHVPRTHLKRNAFSPCPVPDMHGQASWAVTSMPITSVVRFFPAS 60

Query: 253  VLLQEQRDDFRPLHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYW 432
            VLLQEQ DD RP +I RED+ S   LDRR +E+G    ++K   ++++Y++  E + LY 
Sbjct: 61   VLLQEQHDDLRP-YIFREDRISQVILDRRCMETGALVCQDK-DREFNEYLRYLEHRYLYR 118

Query: 433  PGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXX 612
            PGFWY                +  +  DTN   +I+   V + S N + P +        
Sbjct: 119  PGFWYPLPTSYTEEKTSLSDSINSVVNDTNIDAEIEQQHVVKASFNGIIPSEALALAKEA 178

Query: 613  XXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXX 792
                          ++  A ++     G                T               
Sbjct: 179  LLASREVVNLVE--SYSMAHVNGFYFPGQGSKNSAKEIVSVEEATVRSKQLLERRSKRRR 236

Query: 793  XXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQ 972
                   I+   + S + E  +K++   + NDPLRLFLWGPETKQLLT KEE DLF +IQ
Sbjct: 237  VPKKTTVISDATAYSISTEMSRKMSKGLNKNDPLRLFLWGPETKQLLTLKEERDLFNKIQ 296

Query: 973  ELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVH 1152
            +LM+LEE KQ LQ QF REPT  EWAEA+GMSC  LQS LYSGNRSREKMIYANFRLVVH
Sbjct: 297  DLMRLEEAKQNLQLQFGREPTFSEWAEALGMSCHMLQSCLYSGNRSREKMIYANFRLVVH 356

Query: 1153 VAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRT 1332
            VAKQYQG GL +QDLLQEGSMGLMKSLEKFKP+AGCRF +YAYWWIRQSIRKAI QNSRT
Sbjct: 357  VAKQYQGMGLNIQDLLQEGSMGLMKSLEKFKPKAGCRFPSYAYWWIRQSIRKAIFQNSRT 416

Query: 1333 IRLPENVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQP 1512
            IRLPENV+ LL KI+N RK YIQEGH P+NEELA+ VGIT E+ E L  S+R PVSIQ  
Sbjct: 417  IRLPENVFALLKKIKNVRKLYIQEGHIPSNEELARRVGITKERLERLLASSRTPVSIQDR 476

Query: 1513 AWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGER 1692
             W+DQDVT QE+TADP VE P+ +V KQ+MR+H+RNLL +L PRERQIIQFRYGIH GE 
Sbjct: 477  VWMDQDVTIQEITADPEVEVPEFTVAKQMMRQHVRNLLHVLPPRERQIIQFRYGIH-GEP 535

Query: 1693 KSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            KSLS+IG+++GLSKERVRQ+ESRALD LK+ L++QGL+AY+ LLI
Sbjct: 536  KSLSDIGSVFGLSKERVRQLESRALDTLKESLTNQGLDAYMDLLI 580


>CBI32760.3 unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  563 bits (1450), Expect = 0.0
 Identities = 308/582 (52%), Positives = 390/582 (67%), Gaps = 3/582 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            MEAG  ++SS     P+TH   S SSSV M+H+Q APAV S+PTT IA  FP SVLLQEQ
Sbjct: 1    MEAGTNILSSTPSFPPRTHFRNS-SSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQ 58

Query: 271  RDDFRPLHIG-REDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWY 447
            RD++RP     ++++T  ATL++R++E  V+  +E+ S  ++QY+ +FERQLL  PG WY
Sbjct: 59   RDEYRPFPQALKDERTFQATLEKRQMEIVVSA-DEENSDDHNQYMVNFERQLLLQPGLWY 117

Query: 448  XXXXXXXXXXXXXXXX-MEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXX 624
                             M+ I TD  N +D+KP              DV           
Sbjct: 118  SLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPC-------------DVLALAKKALSAS 164

Query: 625  XXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXX 804
                    +   L ADL++S    L                                   
Sbjct: 165  KQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPKVA- 223

Query: 805  XXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMK 984
                 HE   S+  E  +KIN  +DP DPLRLFLWGPET++LLT KEES+L VQIQELM+
Sbjct: 224  ----VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 279

Query: 985  LEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQ 1164
            LEEVK+RLQS   REPT+VEWAEA+G+SC+ LQS+L+SGNRSR+K+IYAN R+VVH+AKQ
Sbjct: 280  LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 339

Query: 1165 YQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLP 1344
            YQGRGL LQDLLQEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAI Q+SRTIRLP
Sbjct: 340  YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 399

Query: 1345 ENVYGLLTKIRNARKSYIQEGHR-PTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWI 1521
            EN+Y LL K++ A++ +IQEGH  PT EE+A+ VGIT+EK + L L TR+P+S+QQP W 
Sbjct: 400  ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 459

Query: 1522 DQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSL 1701
            DQD TFQEVTAD  +E PD+SV KQLMR+H+RNLL +LTP+ER+II+ R+GI DG  ++L
Sbjct: 460  DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 519

Query: 1702 SNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            S IG ++G SKERVRQ+E RAL KLKQCLSS GLE+Y  LL+
Sbjct: 520  SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561


>XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Vitis vinifera]
          Length = 566

 Score =  563 bits (1450), Expect = 0.0
 Identities = 310/583 (53%), Positives = 392/583 (67%), Gaps = 4/583 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            MEAG  ++SS     P+TH   S SSSV M+H+Q APAV S+PTT IA  FP SVLLQEQ
Sbjct: 7    MEAGTNILSSTPSFPPRTHFRNS-SSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQ 64

Query: 271  RDDFRPLHIG-REDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWY 447
            RD++RP     ++++T  ATL++R++E  V+  +E+ S  ++QY+ +FERQLL  PG WY
Sbjct: 65   RDEYRPFPQALKDERTFQATLEKRQMEIVVSA-DEENSDDHNQYMVNFERQLLLQPGLWY 123

Query: 448  XXXXXXXXXXXXXXXX-MEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXX 624
                             M+ I TD  N +D+KP              DV           
Sbjct: 124  SLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPC-------------DVLALAKKALSAS 170

Query: 625  XXXXXXXXDCNFLSADLDESLIS-GLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXX 801
                    +   L ADL++S  S G                T                  
Sbjct: 171  KQAVSLYENAKLLGADLEDSPSSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPKVA-- 228

Query: 802  XXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELM 981
                  HE   S+  E  +KIN  +DP DPLRLFLWGPET++LLT KEES+L VQIQELM
Sbjct: 229  -----VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELM 283

Query: 982  KLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAK 1161
            +LEEVK+RLQS   REPT+VEWAEA+G+SC+ LQS+L+SGNRSR+K+IYAN R+VVH+AK
Sbjct: 284  RLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAK 343

Query: 1162 QYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRL 1341
            QYQGRGL LQDLLQEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAI Q+SRTIRL
Sbjct: 344  QYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRL 403

Query: 1342 PENVYGLLTKIRNARKSYIQEGHR-PTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAW 1518
            PEN+Y LL K++ A++ +IQEGH  PT EE+A+ VGIT+EK + L L TR+P+S+QQP W
Sbjct: 404  PENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVW 463

Query: 1519 IDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKS 1698
             DQD TFQEVTAD  +E PD+SV KQLMR+H+RNLL +LTP+ER+II+ R+GI DG  ++
Sbjct: 464  ADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRT 523

Query: 1699 LSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            LS IG ++G SKERVRQ+E RAL KLKQCLSS GLE+Y  LL+
Sbjct: 524  LSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 566


>XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Vitis vinifera]
          Length = 567

 Score =  563 bits (1450), Expect = 0.0
 Identities = 308/582 (52%), Positives = 390/582 (67%), Gaps = 3/582 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            MEAG  ++SS     P+TH   S SSSV M+H+Q APAV S+PTT IA  FP SVLLQEQ
Sbjct: 7    MEAGTNILSSTPSFPPRTHFRNS-SSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQ 64

Query: 271  RDDFRPLHIG-REDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWY 447
            RD++RP     ++++T  ATL++R++E  V+  +E+ S  ++QY+ +FERQLL  PG WY
Sbjct: 65   RDEYRPFPQALKDERTFQATLEKRQMEIVVSA-DEENSDDHNQYMVNFERQLLLQPGLWY 123

Query: 448  XXXXXXXXXXXXXXXX-MEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXX 624
                             M+ I TD  N +D+KP              DV           
Sbjct: 124  SLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPC-------------DVLALAKKALSAS 170

Query: 625  XXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXX 804
                    +   L ADL++S    L                                   
Sbjct: 171  KQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPKVA- 229

Query: 805  XXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMK 984
                 HE   S+  E  +KIN  +DP DPLRLFLWGPET++LLT KEES+L VQIQELM+
Sbjct: 230  ----VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 285

Query: 985  LEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQ 1164
            LEEVK+RLQS   REPT+VEWAEA+G+SC+ LQS+L+SGNRSR+K+IYAN R+VVH+AKQ
Sbjct: 286  LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 345

Query: 1165 YQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLP 1344
            YQGRGL LQDLLQEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAI Q+SRTIRLP
Sbjct: 346  YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 405

Query: 1345 ENVYGLLTKIRNARKSYIQEGHR-PTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWI 1521
            EN+Y LL K++ A++ +IQEGH  PT EE+A+ VGIT+EK + L L TR+P+S+QQP W 
Sbjct: 406  ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 465

Query: 1522 DQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSL 1701
            DQD TFQEVTAD  +E PD+SV KQLMR+H+RNLL +LTP+ER+II+ R+GI DG  ++L
Sbjct: 466  DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 525

Query: 1702 SNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            S IG ++G SKERVRQ+E RAL KLKQCLSS GLE+Y  LL+
Sbjct: 526  SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 567


>EOY07878.1 RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  562 bits (1449), Expect = 0.0
 Identities = 303/587 (51%), Positives = 386/587 (65%), Gaps = 8/587 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSL----SSSVPMIHEQPAPAVTSMPTTSIAHHFPASVL 258
            MEA R ++S P     +T L  S+    SSSV M HEQ APA TS+P TS+A HFP SVL
Sbjct: 1    MEAARNLLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60

Query: 259  LQEQRDDFRPL---HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLY 429
            LQEQRDD+RPL   H  +EDK  P   D+++IE+G +  EE  S  + Q    FE++LL 
Sbjct: 61   LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQL--GFEKKLLQ 118

Query: 430  WPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXX 609
            WP                    M+ +A DT  ++D++P  +   +  ++           
Sbjct: 119  WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASLSE 178

Query: 610  XXXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXX 789
                             L  DLD+SL + L                              
Sbjct: 179  D----------------LKLDLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKR 222

Query: 790  XXXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                    I  E  SS+  +  +K++  FDPNDPLRLFLWGPETKQLLT KEES+L  Q+
Sbjct: 223  RRVQPKVTI-RETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQV 281

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            Q LM+LE+VK +LQSQF REPTLVEWAEAIG+ C  LQ+ L+SGN SR+K+IYAN R+VV
Sbjct: 282  QNLMRLEKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVV 341

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            H+AKQYQ RGL LQDLLQEGSMGLMKS+E+FKPQ GCRF+TYAYWWIRQ+IRK+I+Q+SR
Sbjct: 342  HIAKQYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSR 401

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQ 1506
            T+RLPENV+ LL+K+ +A+KSYI+EG H P+ EELA+ VGITVEK + L  +TR+P+S+Q
Sbjct: 402  TVRLPENVHTLLSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQ 461

Query: 1507 QPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDG 1686
            Q  W+DQD+TFQEVT D  +E PD+SV KQLMR+H+RNLLS+L+PRER II+ R+GI + 
Sbjct: 462  QSVWVDQDITFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEES 521

Query: 1687 ERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            +  SLS IG ++GLSKERVRQ+ESRAL KLKQCL+  GL AYV LL+
Sbjct: 522  KENSLSEIGNMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568


>XP_008243975.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
            mume]
          Length = 573

 Score =  558 bits (1437), Expect = 0.0
 Identities = 313/587 (53%), Positives = 384/587 (65%), Gaps = 8/587 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVP-----MIHEQPAPAVTSMPTTSIAHHFPASV 255
            MEAGR  +SS S     THL   L SS P     M+HEQ  PAVTS+P TS+A HFP SV
Sbjct: 1    MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 256  LLQEQRDDFRPL-HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYW 432
            LLQEQRD+F+PL H+ +EDKTS ATLDR +IE+G +  E+     +   +   + QLL  
Sbjct: 61   LLQEQRDEFKPLLHVLKEDKTSEATLDRMQIETGASVHEDLDIDDFYPLVNGSKPQLLN- 119

Query: 433  PGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXX 612
            P                    +E + T +N  +D++P  V   +  ++            
Sbjct: 120  PDILDVFSSLQTGAKPSTPVTLESLTTASNKHMDVEPCNVVALAKKALSA---------- 169

Query: 613  XXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXX 792
                        D   + AD DESL  GL                               
Sbjct: 170  ---SREAASLAEDSQSMGADFDESLSLGLGYTSLDNWIVEEEKTVRSTRILERRRKRIKT 226

Query: 793  XXXXXXX-ITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                    I HE +S  + +  KKI+  F+PNDPLRLFLWGPET+QLLT KEE++L  ++
Sbjct: 227  RKVPKSKLIGHESNSFTSSDVPKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARV 286

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            Q+L KLEEVK RLQ+QF REPTL+EWAEA+G+SC+ L+S+L SG  SREK+IYAN R+VV
Sbjct: 287  QDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVV 346

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            H+AKQYQGRGL LQDL+QEGSMGLMKS+EKFKPQAGCRF+TYAYWWIRQ++RKAI Q+SR
Sbjct: 347  HIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSR 406

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQ 1506
            TIRLPENVY LL K+  A+KS IQEG H P  EELA  VGITVEK E L  +TR+P+S+Q
Sbjct: 407  TIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELAIRVGITVEKLEKLLYATRMPLSMQ 466

Query: 1507 QPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDG 1686
            QP W DQD TFQEVTAD  VE PD+SV KQLMR+H+R+LLSIL  RERQII+ RYGI DG
Sbjct: 467  QPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLRERQIIRLRYGIEDG 526

Query: 1687 ERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            +++SLS IG ++GLSKERVRQ+ESRA  KL+Q L SQGL AY  LL+
Sbjct: 527  KQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 573


>ONK72278.1 uncharacterized protein A4U43_C04F17680 [Asparagus officinalis]
          Length = 582

 Score =  557 bits (1435), Expect = 0.0
 Identities = 305/586 (52%), Positives = 375/586 (63%), Gaps = 7/586 (1%)
 Frame = +1

Query: 91   MEAGRRMISS-------PSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPA 249
            MEAGR ++S        P  H P+  L+   S+SV M+H+Q    VT +P TSI   FP 
Sbjct: 1    MEAGRSLLSPTPSAPNIPRAHHPRNPLS---STSVLMLHDQATRPVTFLPATSIVRQFPP 57

Query: 250  SVLLQEQRDDFRPLHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLY 429
            SV  QE   ++    + +E K   ATLDRR  E G++  EE    ++DQY+K  ER+LLY
Sbjct: 58   SVYPQESNSNYNSCLV-KEGKMVQATLDRRHAEDGLSICEESEKQKFDQYLKYLERRLLY 116

Query: 430  WPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXX 609
             PG                    E + +  N +       V QNS +S++P  V      
Sbjct: 117  QPGLCSPFTVPCSEENKYLAMSSESVNSGANILAGSDQSLVLQNSLSSVQPGSVLALAKK 176

Query: 610  XXXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXX 789
                           + L ++L E    GL               T              
Sbjct: 177  AMLASRKAASLADKSSILESELREPYFIGLDINRFTEEVAINEETTVRSKRRLERQSKRR 236

Query: 790  XXXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                      +EVS +  ++  KK+    + +DP RLFLWGPETKQLLT KEE DLF+ I
Sbjct: 237  KVPKKPENAVYEVSGAMLVDLKKKVQKALNTDDPFRLFLWGPETKQLLTVKEEKDLFLNI 296

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            QELMKLE  KQRLQ QF REPTL EWA A+GMSC+ LQS L SGNRSREKMIYANFRLV+
Sbjct: 297  QELMKLEGSKQRLQMQFGREPTLAEWAGAVGMSCQTLQSCLRSGNRSREKMIYANFRLVI 356

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            HVAKQY+G+GL +QDLLQEGS GLMKSLEKFKP++GCRFS+YAYWWIRQSIRKAI QNSR
Sbjct: 357  HVAKQYEGKGLNIQDLLQEGSKGLMKSLEKFKPKSGCRFSSYAYWWIRQSIRKAIFQNSR 416

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQ 1509
            T+RLPENV+ LL KIR+AR+  IQEGH P N+EL+K VGI VEK E L +++R P+SIQ+
Sbjct: 417  TVRLPENVFALLKKIRDARRLCIQEGHIPCNQELSKLVGIRVEKLESLLMNSRNPLSIQE 476

Query: 1510 PAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGE 1689
             AW+DQDVTFQE+TADP VE PDL + KQ+MR H+ NLL +L  RERQII+FR+GI D +
Sbjct: 477  RAWLDQDVTFQEITADPEVETPDLMIAKQMMREHVHNLLGVLNHRERQIIKFRFGIQDNK 536

Query: 1690 RKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
             KSLS+IGA+Y LSKERVRQ+ESRALDKLK CLSS+GLEAY+ +LI
Sbjct: 537  PKSLSDIGAMYDLSKERVRQLESRALDKLKGCLSSEGLEAYIDMLI 582


>XP_020085184.1 RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Ananas
            comosus] XP_020085185.1 RNA polymerase sigma factor sigF,
            chloroplastic isoform X2 [Ananas comosus]
          Length = 573

 Score =  555 bits (1431), Expect = 0.0
 Identities = 302/579 (52%), Positives = 381/579 (65%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQ 270
            MEA   +++ P++  P+ HL    S+SVPMI E  +  VTSM T+S+ H  PAS+L  EQ
Sbjct: 1    MEARTSILAPPNL--PRAHLRNPSSTSVPMISEHASRIVTSMTTSSLVHRLPASLLSLEQ 58

Query: 271  RDDFRPLHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWYX 450
              D +  ++ +E+K S ATLD++++       EE   Y++ QY++ F+RQL+  PG W  
Sbjct: 59   HHDRKDYYL-KEEKVSQATLDKQKVGDSKPLCEENEEYEFGQYLEYFQRQLISRPGLWPQ 117

Query: 451  XXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXXX 630
                           +    +++  V +   +G   NSP+S+ P  V             
Sbjct: 118  PTINKENTTSIMSKELSVHHSNSTKVAESIQLG---NSPDSLSPAVVLSLAKKAMMATRK 174

Query: 631  XXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXX 810
                    N LSA LDE   SG+                                     
Sbjct: 175  ATLLAQKSNILSAVLDEQHFSGVSDKEFSEEISIKKGKIVKSKRLLERRSKKRKASKSPS 234

Query: 811  XITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKLE 990
             I +EV+S K+I+  KKI+   D NDPL+LFL GPETKQLLT KEE DL +QIQ++++LE
Sbjct: 235  SIGYEVASLKSIDISKKIDKRLDSNDPLKLFLRGPETKQLLTLKEEKDLIIQIQDVIRLE 294

Query: 991  EVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQYQ 1170
             VKQRL+ QF  EPTL EWA ++GMSC+ LQS L SG RSREK+IYANFRLV+HVAKQY+
Sbjct: 295  GVKQRLELQFGHEPTLAEWARSVGMSCQVLQSCLCSGRRSREKIIYANFRLVIHVAKQYE 354

Query: 1171 GRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPEN 1350
            G+GL LQDLLQEGS GL+KSLEKFKPQAGCRF +YAYWWIRQSIRKAI Q+SRTIRLPEN
Sbjct: 355  GKGLSLQDLLQEGSRGLIKSLEKFKPQAGCRFPSYAYWWIRQSIRKAIFQHSRTIRLPEN 414

Query: 1351 VYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQD 1530
            V+GLL K++ ARK YIQ G+ P NEE+AKCVGIT +K E L L  R PV I++  W DQD
Sbjct: 415  VFGLLRKVKAARKLYIQGGYLPANEEIAKCVGITSQKLESLLLRARNPVPIRKRVWTDQD 474

Query: 1531 VTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSNI 1710
            VT QE+TADP VE PDL+++K +MR H+RN L IL PRER+IIQ+R+GIHDGERKSL+ I
Sbjct: 475  VTLQEITADPEVEIPDLNISKAMMREHVRNFLRILNPRERKIIQYRFGIHDGERKSLTEI 534

Query: 1711 GALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            G +YGLSKERVRQ+ESRALDKLK+ L SQGLEAY+ LLI
Sbjct: 535  GRMYGLSKERVRQLESRALDKLKESLPSQGLEAYLHLLI 573


>ONI03022.1 hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 568

 Score =  553 bits (1425), Expect = 0.0
 Identities = 310/586 (52%), Positives = 382/586 (65%), Gaps = 7/586 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVP-----MIHEQPAPAVTSMPTTSIAHHFPASV 255
            MEAGR  +SS S     THL   L SS P     M+HEQ  PAVTS+P TS+A HFP SV
Sbjct: 1    MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 256  LLQEQRDDFRPL-HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYW 432
            LLQEQRD+F+PL H+ +EDKTS A LDR +IE+G +  E+     +   +   + QLL  
Sbjct: 61   LLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDIDDFYPLVNSSKPQLLNH 120

Query: 433  PGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXX 612
                                 +E + T +N  +D++P  V   +  ++            
Sbjct: 121  D-ILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSA---------- 169

Query: 613  XXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXX 792
                        D   + AD DESL  GL                               
Sbjct: 170  ---SREAASLAEDSQSMGADFDESLSLGLANWIVEEEKTVRSTRILERRRKRIKTRKVPK 226

Query: 793  XXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQ 972
                   I HE +S    +  KKI+  F+PNDPLRLFLWGPET+QLLT KEE++L  ++Q
Sbjct: 227  SKV----IGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQ 282

Query: 973  ELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVH 1152
            +L KLEEVK RLQ+QF REPTL+EWAEA+G+SC+ L+S+L SG  SREK+IYAN R+VVH
Sbjct: 283  DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 342

Query: 1153 VAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRT 1332
            +AKQYQGRGL LQDL+QEGSMGLMKS+EKFKPQAGCRF+TYAYWWIRQ++RKAI Q+SRT
Sbjct: 343  IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 402

Query: 1333 IRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQ 1509
            IRLPENVY LL K+  A+KS IQEG H P  EELA+ VGITVEK E L  +TR+P+S+QQ
Sbjct: 403  IRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQ 462

Query: 1510 PAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGE 1689
            P W DQD TFQEVTAD  VE PD+SV KQLMR+H+R+LLSIL  RER+II+ RYGI DG+
Sbjct: 463  PVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGK 522

Query: 1690 RKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            ++SLS IG ++GLSKERVRQ+ESRA  KL+Q L SQGL AY  LL+
Sbjct: 523  QRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 568


>ONI03024.1 hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 573

 Score =  553 bits (1425), Expect = 0.0
 Identities = 309/587 (52%), Positives = 382/587 (65%), Gaps = 8/587 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVP-----MIHEQPAPAVTSMPTTSIAHHFPASV 255
            MEAGR  +SS S     THL   L SS P     M+HEQ  PAVTS+P TS+A HFP SV
Sbjct: 1    MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 256  LLQEQRDDFRPL-HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYW 432
            LLQEQRD+F+PL H+ +EDKTS A LDR +IE+G +  E+     +   +   + QLL  
Sbjct: 61   LLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDIDDFYPLVNSSKPQLLNH 120

Query: 433  PGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXX 612
                                 +E + T +N  +D++P  V   +  ++            
Sbjct: 121  D-ILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSA---------- 169

Query: 613  XXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXX 792
                        D   + AD DESL  GL                               
Sbjct: 170  ---SREAASLAEDSQSMGADFDESLSLGLGYTSLANWIVEEEKTVRSTRILERRRKRIKT 226

Query: 793  XXXXXXXIT-HEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                   +  HE +S    +  KKI+  F+PNDPLRLFLWGPET+QLLT KEE++L  ++
Sbjct: 227  RKVPKSKVIGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARV 286

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            Q+L KLEEVK RLQ+QF REPTL+EWAEA+G+SC+ L+S+L SG  SREK+IYAN R+VV
Sbjct: 287  QDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVV 346

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            H+AKQYQGRGL LQDL+QEGSMGLMKS+EKFKPQAGCRF+TYAYWWIRQ++RKAI Q+SR
Sbjct: 347  HIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSR 406

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQ 1506
            TIRLPENVY LL K+  A+KS IQEG H P  EELA+ VGITVEK E L  +TR+P+S+Q
Sbjct: 407  TIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQ 466

Query: 1507 QPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDG 1686
            QP W DQD TFQEVTAD  VE PD+SV KQLMR+H+R+LLSIL  RER+II+ RYGI DG
Sbjct: 467  QPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDG 526

Query: 1687 ERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            +++SLS IG ++GLSKERVRQ+ESRA  KL+Q L SQGL AY  LL+
Sbjct: 527  KQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 573


>XP_009384040.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Musa
            acuminata subsp. malaccensis]
          Length = 577

 Score =  551 bits (1419), Expect = 0.0
 Identities = 300/580 (51%), Positives = 381/580 (65%), Gaps = 1/580 (0%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHR-PKTHLTVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQE 267
            M+A R ++S  SI   PK HL    ++SVPM+ +Q +  +  +P T + HH  ASVL +E
Sbjct: 1    MKACRSLLSPVSIPMVPKNHLRTPYTNSVPMLLDQASQPMIHVPATQVVHHITASVLSKE 60

Query: 268  QRDDFRPLHIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWY 447
            Q DD +  H+ + +K+  AT D+   E+G +  EE+  ++++QY++  E QL Y P  WY
Sbjct: 61   QCDDLKTNHLNKVEKSVQATPDKWLTEAGRSCSEEREKHEFNQYLRYLECQLSYQPSLWY 120

Query: 448  XXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXX 627
                            + P  T T    D   M V +N+ + + P DV            
Sbjct: 121  PFPPLDEEKQSLPVS-VGPEETSTCVSGDSSAMQV-ENTKDCITPADVLALAKKAMIASK 178

Query: 628  XXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXX 807
                     N L  ++D+S   G                T                    
Sbjct: 179  IAASLVEQSNILGIEVDKSNFLGFDEGSNDDTFFKEET-TVRSRKLLERRSKKRKVSKNP 237

Query: 808  XXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKL 987
                H  +SS  I + KKI+   D NDPLRLFLWGPETKQLLT KEE DLFV+I++LM+L
Sbjct: 238  NNFVHHGASSVTINQSKKIDKRLDSNDPLRLFLWGPETKQLLTVKEEKDLFVKIEDLMRL 297

Query: 988  EEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQY 1167
            EEVK+RLQSQ DREPTL EWA+A+GMSC+DLQS L SG R+REKMIYANFRLVVHVA+QY
Sbjct: 298  EEVKERLQSQSDREPTLAEWAQAVGMSCQDLQSCLSSGRRNREKMIYANFRLVVHVARQY 357

Query: 1168 QGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPE 1347
            +G+GL +QDLLQEGS GLMKSLEKFKP+AGCRF TYAYWWIRQSI+KAI +NSRTIRLPE
Sbjct: 358  EGKGLNIQDLLQEGSRGLMKSLEKFKPRAGCRFPTYAYWWIRQSIKKAIFKNSRTIRLPE 417

Query: 1348 NVYGLLTKIRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQ 1527
            N +  L  IR AR+  IQEG  PTNEE+AK VGITV+K E+L L++R P+SIQ+  W+DQ
Sbjct: 418  NAFARLKSIREARRLCIQEGLLPTNEEIAKRVGITVQKLEILLLNSRYPISIQRHPWLDQ 477

Query: 1528 DVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSN 1707
            DVTFQE  ADP++E PDL + KQ+MR+H+RNLL+IL PRER I+Q+R+GI   E+KSLS 
Sbjct: 478  DVTFQETVADPKIEIPDLVIAKQMMRQHVRNLLNILKPRERVIVQYRFGIRCSEQKSLSE 537

Query: 1708 IGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            IGA+YGLSKERVRQ+ES+AL KL++CL SQGLEAY+ LLI
Sbjct: 538  IGAMYGLSKERVRQLESQALGKLRKCLQSQGLEAYLDLLI 577


>ERM94834.1 hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
          Length = 573

 Score =  546 bits (1407), Expect = 0.0
 Identities = 303/571 (53%), Positives = 366/571 (64%), Gaps = 7/571 (1%)
 Frame = +1

Query: 133  RPKTHLTVSLSSSVPMIHEQPAPA---VTSMPTTSIAHHFPASVLLQEQRDDFR-PLHIG 300
            RP   L+ + S + P I   P  A    T + TTS   HFPASV+L EQRDD R P    
Sbjct: 7    RPSRALSSTASPNSPGILTSPDQAPLTATMLSTTSAVRHFPASVVLHEQRDDLRSPTSSP 66

Query: 301  REDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWYXXXXXXXXXXX 480
            +EDK     +DR R E   +   E ++++ DQY+KDFERQLLYWP  WY           
Sbjct: 67   KEDKAYQEVMDRARTEVYASIGAETKNFEIDQYLKDFERQLLYWPALWYLSPSRILPKSL 126

Query: 481  XXXXXM-EPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXXXXXXXXX--D 651
                   +P+ TD  +  +IK     Q + +S+ P DV                     D
Sbjct: 127  LSLPFQCKPLETDIES--EIKESRKKQTNCSSLNPMDVLVLAKRAVMASKAAAALVEHSD 184

Query: 652  CNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXITHEVS 831
                + D D S  SGL               T                       +    
Sbjct: 185  LTVGNPDGDISPCSGLKEICIQVPDEDMRT-TIRSKRHLERQIKRRRVPKKLKDFSANFE 243

Query: 832  SSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKLEEVKQRLQ 1011
              K  EK K  N  FDPNDPLR FLWGP TKQLLT KEES+LFV+IQ+LM++EEVK+ L+
Sbjct: 244  IGKKPEKVK--NKSFDPNDPLRFFLWGPITKQLLTEKEESELFVKIQDLMRVEEVKKELE 301

Query: 1012 SQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQYQGRGLILQ 1191
             QF  EPT+VEWA A GMS   LQS ++ G +SREKMIYANFRLVVHVAK YQGRGL +Q
Sbjct: 302  MQFGCEPTVVEWARAAGMSYGSLQSCIHFGRKSREKMIYANFRLVVHVAKNYQGRGLSIQ 361

Query: 1192 DLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPENVYGLLTK 1371
            DLLQEGS+GLMKSLEKFKP+ GCRFSTYAYWWIRQ+IRK++ QNSRTIRLPENVYGLLTK
Sbjct: 362  DLLQEGSVGLMKSLEKFKPKTGCRFSTYAYWWIRQAIRKSLFQNSRTIRLPENVYGLLTK 421

Query: 1372 IRNARKSYIQEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQDVTFQEVT 1551
            I+NAR+ Y QEGHRPTNEELA+ VGITV+K E +R+ +++PVSIQQP W DQDVT QE+T
Sbjct: 422  IKNARRLYFQEGHRPTNEELAQRVGITVDKLETVRVFSKLPVSIQQPVWSDQDVTIQEIT 481

Query: 1552 ADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSNIGALYGLS 1731
            ADP+VE P+ +V KQLMRRH+RNLLS+L PRERQ+I  R+GI   ERKSLS IG ++ +S
Sbjct: 482  ADPKVETPEKNVAKQLMRRHVRNLLSLLNPRERQVINLRFGIQGRERKSLSEIGGMFNVS 541

Query: 1732 KERVRQVESRALDKLKQCLSSQGLEAYVSLL 1824
            KER+RQVES+AL+KLK C  +QGLE Y  LL
Sbjct: 542  KERIRQVESKALEKLKNCTQTQGLEVYAELL 572


>XP_011624483.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Amborella
            trichopoda]
          Length = 581

 Score =  546 bits (1406), Expect = 0.0
 Identities = 301/562 (53%), Positives = 362/562 (64%), Gaps = 4/562 (0%)
 Frame = +1

Query: 151  TVSLSSSVPMIHEQPAPAVTSMPTTSIAHHFPASVLLQEQRDDFR-PLHIGREDKTSPAT 327
            T   SSSV    +Q     T + TTS   HFPASV+L EQRDD R P    +EDK     
Sbjct: 24   TAPPSSSVLTSPDQAPLTATMLSTTSAVRHFPASVVLHEQRDDLRSPTSSPKEDKAYQEV 83

Query: 328  LDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLYWPGFWYXXXXXXXXXXXXXXXXM-EP 504
            +DR R E   +   E ++++ DQY+KDFERQLLYWP  WY                  +P
Sbjct: 84   MDRARTEVYASIGAETKNFEIDQYLKDFERQLLYWPALWYLSPSRILPKSLLSLPFQCKP 143

Query: 505  IATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXXXXXXXXXXXXXXX--DCNFLSADLD 678
            + TD  +  +IK     Q + +S+ P DV                     D    + D D
Sbjct: 144  LETDIES--EIKESRKKQTNCSSLNPMDVLVLAKRAVMASKAAAALVEHSDLTVGNPDGD 201

Query: 679  ESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXITHEVSSSKAIEKGK 858
             S  SGL               T                       +      K  EK K
Sbjct: 202  ISPCSGLKEICIQVPDEDMRT-TIRSKRHLERQIKRRRVPKKLKDFSANFEIGKKPEKVK 260

Query: 859  KINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQIQELMKLEEVKQRLQSQFDREPTL 1038
              N  FDPNDPLR FLWGP TKQLLT KEES+LFV+IQ+LM++EEVK+ L+ QF  EPT+
Sbjct: 261  --NKSFDPNDPLRFFLWGPITKQLLTEKEESELFVKIQDLMRVEEVKKELEMQFGCEPTV 318

Query: 1039 VEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVVHVAKQYQGRGLILQDLLQEGSMG 1218
            VEWA A GMS   LQS ++ G +SREKMIYANFRLVVHVAK YQGRGL +QDLLQEGS+G
Sbjct: 319  VEWARAAGMSYGSLQSCIHFGRKSREKMIYANFRLVVHVAKNYQGRGLSIQDLLQEGSVG 378

Query: 1219 LMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSRTIRLPENVYGLLTKIRNARKSYI 1398
            LMKSLEKFKP+ GCRFSTYAYWWIRQ+IRK++ QNSRTIRLPENVYGLLTKI+NAR+ Y 
Sbjct: 379  LMKSLEKFKPKTGCRFSTYAYWWIRQAIRKSLFQNSRTIRLPENVYGLLTKIKNARRLYF 438

Query: 1399 QEGHRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQQPAWIDQDVTFQEVTADPRVEPPD 1578
            QEGHRPTNEELA+ VGITV+K E +R+ +++PVSIQQP W DQDVT QE+TADP+VE P+
Sbjct: 439  QEGHRPTNEELAQRVGITVDKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPE 498

Query: 1579 LSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDGERKSLSNIGALYGLSKERVRQVES 1758
             +V KQLMRRH+RNLLS+L PRERQ+I  R+GI   ERKSLS IG ++ +SKER+RQVES
Sbjct: 499  KNVAKQLMRRHVRNLLSLLNPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVES 558

Query: 1759 RALDKLKQCLSSQGLEAYVSLL 1824
            +AL+KLK C  +QGLE Y  LL
Sbjct: 559  KALEKLKNCTQTQGLEVYAELL 580


>XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Juglans regia]
          Length = 570

 Score =  542 bits (1396), Expect = 0.0
 Identities = 303/587 (51%), Positives = 374/587 (63%), Gaps = 8/587 (1%)
 Frame = +1

Query: 91   MEAGRRMISSPSIHRPKTHLTVSLSSSVP------MIHEQPAPAVTSMPTTSIAHHFPAS 252
            ME GR ++SS        HL   LSSS        M+HEQ A  VTSM +T       AS
Sbjct: 1    MEVGRNLLSSKPSFPSGIHLKNCLSSSSSSSTSTLMLHEQAASVVTSMLSTCTPQRRRAS 60

Query: 253  VLLQEQRDDFRPL-HIGREDKTSPATLDRRRIESGVAFFEEKRSYQYDQYIKDFERQLLY 429
            + LQEQRD+  PL H+ +ED  S   L+R  I +G +  EEK     +Q + DFERQLL+
Sbjct: 61   IPLQEQRDENDPLLHVFKEDAMSWGILERTWIVAGASVNEEKIPENSNQLLHDFERQLLH 120

Query: 430  WPGFWYXXXXXXXXXXXXXXXXMEPIATDTNNVLDIKPMGVAQNSPNSMRPWDVXXXXXX 609
            WPG                   M+PI   T N +D++   +   +  ++           
Sbjct: 121  WPGLGQLSPPLQTGKTMSSSLSMQPIPASTENPMDVEECDIVALAKKALSA--------- 171

Query: 610  XXXXXXXXXXXXXDCNFLSADLDESLISGLXXXXXXXXXXXXXXXTXXXXXXXXXXXXXX 789
                         D   + +D DESL SG                               
Sbjct: 172  ----SQEAALLAEDSKLIGSDFDESLSSGFGSRIFVNIPLEEEKVVRSTRILERRSKKRR 227

Query: 790  XXXXXXXXITHEVSSSKAIEKGKKINYDFDPNDPLRLFLWGPETKQLLTGKEESDLFVQI 969
                      HE  SS+ ++  +KI+  FDPNDPLRLFLWGPETKQLLT +EES+L  Q+
Sbjct: 228  VPKSN----VHENHSSRNVDVKRKISEGFDPNDPLRLFLWGPETKQLLTFEEESELIAQV 283

Query: 970  QELMKLEEVKQRLQSQFDREPTLVEWAEAIGMSCRDLQSRLYSGNRSREKMIYANFRLVV 1149
            Q+L+KLEEVK RLQS F REPTLVEWAE +G+S R L+SRLYSGN SREK+IYAN R+VV
Sbjct: 284  QDLLKLEEVKIRLQSHFGREPTLVEWAEGVGLSYRALKSRLYSGNSSREKLIYANLRMVV 343

Query: 1150 HVAKQYQGRGLILQDLLQEGSMGLMKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIVQNSR 1329
            HVAK Y GRGL  QDLLQEGSMGLMKS+EKFKPQ+GCRF+TYAYWWIRQSIRKAI Q+SR
Sbjct: 344  HVAKLYPGRGLSFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKAIYQHSR 403

Query: 1330 TIRLPENVYGLLTKIRNARKSYIQEG-HRPTNEELAKCVGITVEKFEMLRLSTRIPVSIQ 1506
            TIRLPENV+ LL K+  +++  IQEG H PT EELA+ VGITV K E L  +TR+P+S+Q
Sbjct: 404  TIRLPENVHALLGKMMESKRLLIQEGNHHPTKEELARHVGITVNKLEKLLYTTRLPLSMQ 463

Query: 1507 QPAWIDQDVTFQEVTADPRVEPPDLSVTKQLMRRHMRNLLSILTPRERQIIQFRYGIHDG 1686
            +P W DQD TFQE+TAD  VE P++SV K+LMR+H RNLLSIL+PRER+II+ R+GI DG
Sbjct: 464  RPVWTDQDTTFQEITADTEVEIPEVSVAKKLMRQHARNLLSILSPRERRIIRLRFGIEDG 523

Query: 1687 ERKSLSNIGALYGLSKERVRQVESRALDKLKQCLSSQGLEAYVSLLI 1827
            ++KSLS IG L+GLSKERVRQ+E+RAL +LKQCL S+GL AY  LL+
Sbjct: 524  KQKSLSEIGNLFGLSKERVRQLENRALHRLKQCLGSEGLVAYTELLV 570