BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00007407
         (5670 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  2021   0.0  
XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1912   0.0  
CBI29879.3 unnamed protein product, partial [Vitis vinifera]         1894   0.0  
XP_008798769.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1844   0.0  
XP_010922210.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1839   0.0  
AIO05696.1 putative RNA polymerase AI large subunit, partial [Co...  1833   0.0  
XP_015579396.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1789   0.0  
EEF35648.1 DNA-directed RNA polymerase I largest subunit, putati...  1785   0.0  
XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1776   0.0  
XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1771   0.0  
XP_007028854.2 PREDICTED: DNA-directed RNA polymerase I subunit ...  1769   0.0  
XP_017977139.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1767   0.0  
XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1766   0.0  
EOY09356.1 Nuclear RNA polymerase A1, putative isoform 2 [Theobr...  1765   0.0  
XP_010036456.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1714   0.0  
XP_010036455.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1714   0.0  
XP_017414824.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1712   0.0  
XP_011020318.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1711   0.0  
XP_015866147.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1706   0.0  
XP_014513718.1 PREDICTED: DNA-directed RNA polymerase I subunit ...  1706   0.0  

>XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Nelumbo nucifera]
          Length = 1676

 Score = 2021 bits (5236), Expect = 0.0
 Identities = 1041/1708 (60%), Positives = 1263/1708 (73%), Gaps = 41/1708 (2%)
 Frame = -3

Query: 5431 HREHGSTPNIRGCDREHRFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPV 5252
            H   G+T ++       RFSF TDEEVR+ SFKKIT+P  FD++ RP+PGGL+D ALGP+
Sbjct: 3    HVTEGATEHVEAV----RFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPL 58

Query: 5251 DDGLPCKSCGQNALLCPGHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQ 5072
            DD  PC+SCGQ +  CPGHCGHIDLV PVYNPLLF+IL  L+++ CFFCH F+ + E+VQ
Sbjct: 59   DDRTPCQSCGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQ 118

Query: 5071 AYASQLDLIIKGDTV---------------------------RDLCEEDGVT---DTSVH 4982
             YASQL+LIIKGD                                 EE+ +T   DT++H
Sbjct: 119  KYASQLELIIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIH 178

Query: 4981 TKERSSTS------NWTSFQYHEVKSILNKFMGENFKKCQNCGANNPKITSPTFGWFQMD 4820
            + +++         +WTS QY E  S+L  FM +   +CQNCGA +P IT PTFGWF M+
Sbjct: 179  SVDQNCNPMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMN 238

Query: 4819 DMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNADDTMLGGNSVESHDTELSGAVD 4640
             M NAD RAN+++GCKL +TFV GA  RS    +A+N DD +  G+  +    E SGAV 
Sbjct: 239  -MSNADIRANVLRGCKLSDTFVHGAAQRSHT-AEAENVDDVLARGDDADI--LESSGAVS 294

Query: 4639 DGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVKNLLKLLWENEARLCSLIFDIQ 4460
            DG     +   K  G  +PP+F  QRK LSGPLLP EVK  ++LLW+NEARLCSLI DIQ
Sbjct: 295  DGTLEFVTETDKKIGEHIPPDFFSQRKFLSGPLLPPEVKETMRLLWKNEARLCSLICDIQ 354

Query: 4459 QQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEVEHPQSVLLSTVVQLNLSLGKA 4280
             + L ++G +   SMFF EALLVPP KFRPP++     +EHPQ+VLL  V+Q N++LG A
Sbjct: 355  HERLHVSGMNARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNA 414

Query: 4279 YMNNSEREKIVNRWMNLQQTINVLFDSRKAIRQKDRGTSGICQLIEKKEGIFRQKMMGKR 4100
            + N+S+R KI+ RWM+LQQT+N+L+DS K   Q+D   +GICQL+EKKEGIFRQKMMGKR
Sbjct: 415  HANSSDRSKIIPRWMDLQQTVNILYDS-KTSGQRDNTATGICQLLEKKEGIFRQKMMGKR 473

Query: 4099 VNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTPWNVNKLRHALVNGTEIHPGATH 3920
            VN+ACRSVISPDPYLAVNEIGIPPYFA++LTYPERVTPWNVNKLR A++NG E HPGATH
Sbjct: 474  VNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATH 533

Query: 3919 YADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSLDSEFEGKVVYRHMQDGDIVLVN 3740
            Y DK + V+LP                RGAVT PGK+L+ EFEGKVVYRH+QDGDIVLVN
Sbjct: 534  YVDKLATVKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVN 593

Query: 3739 RQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAIEI 3560
            RQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA  I
Sbjct: 594  RQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNI 653

Query: 3559 ANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLTRDEYHMLLYASGVSTAASGSYV 3380
             NANKQY+VPTSG PIRGLIQDHI+SAVLLTK+DTFLTRDE+  LLY+SGVS  A G +V
Sbjct: 654  VNANKQYVVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFV 713

Query: 3379 GKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITTILNHITRGRPPFTVKKEGKIED 3200
            GK GQK+ T++S++E++P+ P IWKP+PLWTGKQVIT +LNHITRGR PF+V+K GK  +
Sbjct: 714  GKPGQKISTINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAGKTPE 773

Query: 3199 GCFYSEWKEGNMVEXXXXXXXXXXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYG 3020
              F     E                  +L+I KNELVHGVIDK QF  YG+VHTVQE YG
Sbjct: 774  EYFGKTSGE-----------------YELLIHKNELVHGVIDKAQFGGYGLVHTVQELYG 816

Query: 3019 SNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFI 2840
            SN AG+LLSVLSRLFT+FLQMHGFTCG+DDLLIV   DL+R   L+K+E  G   H +F+
Sbjct: 817  SNAAGVLLSVLSRLFTIFLQMHGFTCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFV 876

Query: 2839 GAKIA--EPVKLQMEIERAIRSHGESAVTYLDMLMSHELNGVTTEVNDAIIPNGLLKPFP 2666
            G      +P+KLQ+EIE+AIR +G+SAVT LD  MS  +N +T+EVN  + P GL KPFP
Sbjct: 877  GCADGDKDPIKLQVEIEKAIRRNGDSAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPFP 936

Query: 2665 RNCLSLMTTTGAKGSQVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGF 2486
            +NCLSLMT TGAKG  VN TQI SLLGQQ+LEGKRVPRMVSGKTLPCFPPWD A+RAGGF
Sbjct: 937  KNCLSLMTATGAKGGMVNSTQICSLLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGF 996

Query: 2485 IGDRFLTGLRPQEYYFHCMAGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDA 2306
            I DRFLTGLRPQEYYFHCMAGREGLVDTA+KTSRSGYLQRCL+KNLE L+VCYD+TVRDA
Sbjct: 997  ISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDA 1056

Query: 2305 DGSVVQFCYGEDGVDVHKASFITEFKLLAQNQRIILEKLSGQHEDA---SNCYVNELPDA 2135
            DGSVVQF YGEDG+DVHK SF+ EF+ LA N RI+ E+ + Q +        Y+ +LP A
Sbjct: 1057 DGSVVQFIYGEDGIDVHKTSFLEEFEALAANHRIVQERFNNQLDSEVLFKYDYIKKLPVA 1116

Query: 2134 LRGKAKDFIGTLSKKKRDSLHLRKQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPST 1955
            L GKAKD+I TLSKKK  SL+LRK+K+ M L++ KY+SSLAQPGE VGV+AAQSVGEPST
Sbjct: 1117 LEGKAKDYIDTLSKKKLKSLNLRKRKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPST 1176

Query: 1954 QMTLNTFHHAGQGEMNVTLGIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKL 1775
            QMTLNTFHHAG+GEMNVTLGIPRLQEIL RAS KI+TP+MTCPLRKG T  +A+RLAAKL
Sbjct: 1177 QMTLNTFHHAGRGEMNVTLGIPRLQEILMRASEKIQTPVMTCPLRKGKTEDDAKRLAAKL 1236

Query: 1774 KMVSVADIVESMEVCVVPFSVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVS 1595
            + V+VAD++ESMEV VVPFSV +   ST+YKLK+KL+PPELYPPYS ITL+DC+ TL+  
Sbjct: 1237 QKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLKLYPPELYPPYSGITLKDCQATLKFV 1296

Query: 1594 FIRELEDSIQSHIKMLSKIRGIKAVTNSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXX 1415
            F+ E+ED+IQSH+ MLSKIRGI  V +S + N+     E+ P S S Q            
Sbjct: 1297 FVGEMEDAIQSHLLMLSKIRGITNVVHSTQSNSGDGADEDGPTSKS-QAAEENDDAGDDD 1355

Query: 1414 XXXXXXXXXXDAQKRKWQAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDG 1235
                      DAQKRK QA DEMDY+D ME+++   E+   + E S GFESEIDQ E + 
Sbjct: 1356 DYEAPDDLGADAQKRKRQATDEMDYEDDMENEIVNTENGRSDIEASAGFESEIDQAEVEA 1415

Query: 1234 DYTLGGESEIMEGEDQIFDAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKK 1055
                     IM+GE Q+FDAEDEA  +PS+   +SK K S  + +  A   +G     KK
Sbjct: 1416 -------GNIMDGEIQVFDAEDEASQTPSQHGTVSKSKSSGGKDEADA---RGMTRRTKK 1465

Query: 1054 KTDRAILVVIKGLKFEAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIGYEEDN 875
             +DRA  +V +GL FE HF F +EPH             VYVKRS NI+ CSV+  ++ +
Sbjct: 1466 DSDRAFFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKAD 1525

Query: 874  KKGEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVF 695
             + E+ P LQT+GV+F  FWN+QD+LDIR + SNDI+A+LNTYGVEAARATI+++V  VF
Sbjct: 1526 GEPEI-PELQTSGVDFPTFWNMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVF 1584

Query: 694  KPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHG 515
            K Y I+V+IRHL+LIAD+MT  GGYRPM+RFG+A++  SP  KMS+ETA++F++EAA HG
Sbjct: 1585 KSYGIAVNIRHLSLIADFMTQTGGYRPMSRFGIAET-ISPFSKMSYETASRFVIEAAYHG 1643

Query: 514  EVERLESPSARICLGLPVKMGTGCFDLM 431
            E++ LESPSARICLGLPVKMGTGCFDLM
Sbjct: 1644 EMDNLESPSARICLGLPVKMGTGCFDLM 1671


>XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Vitis vinifera]
          Length = 1691

 Score = 1912 bits (4954), Expect = 0.0
 Identities = 1011/1700 (59%), Positives = 1209/1700 (71%), Gaps = 50/1700 (2%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            +FSFFTDEEVR +SFKKITSP+  D + RPVPGGL+D ALG +D+  PC+SCGQ +  CP
Sbjct: 16   KFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCP 75

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+ VYNPLLF +LH L++K CFFCHHF+     VQ Y SQL+LI KGD V  
Sbjct: 76   GHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGA 135

Query: 5026 RDLC-----------EEDGVTDTSVHTKERSSTSN---------WTSFQYHEVKSILNKF 4907
            ++L            + DG   +   T   S+  N         WTS Q  E  S+++ F
Sbjct: 136  KNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNF 195

Query: 4906 MGENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFM 4727
            +    + C+NC A +P++T PTFGWF M  + +A TRAN+I+G KL+    R AE +S  
Sbjct: 196  LKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKS-- 253

Query: 4726 DGDAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSG 4547
              + +N +D    G+ V++ +T  S A  DG+    + + + KG   P EF+KQ+   SG
Sbjct: 254  SSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSG 313

Query: 4546 PLLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPP 4367
            PLLPSEV+++++ LWENEA LCS I DI Q+ L  +G     SMFF+E +LVPP KFRPP
Sbjct: 314  PLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPP 373

Query: 4366 SRKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAI 4187
            S+     +EHPQ+VLL  V+Q N++LG A+ NNSER KI++RWM+LQQ+INVLFD + A 
Sbjct: 374  SKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAA 433

Query: 4186 RQKDRGT-SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKL 4010
             Q  R T SGICQL+EKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L
Sbjct: 434  GQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 493

Query: 4009 TYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGA 3830
            TYPE+VTPWNV KLR A++NG EIHPGATHY DK S V+L                 RG 
Sbjct: 494  TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGV 553

Query: 3829 VTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 3650
            V  PG+S D+EFEGK+VYRH+QDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTLRMHYAN
Sbjct: 554  VAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYAN 613

Query: 3649 CSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLL 3470
            CSTYNADFDGDEMNVHFPQDEISRAEA  I NAN QYIVP+ G PIRGLIQDHIVSAVLL
Sbjct: 614  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLL 673

Query: 3469 TKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLW 3290
            TKKDTFLTR++Y+ LLY+SG+S+  SGS++GK G+KV  L S+DE+QPL P IWKP+PLW
Sbjct: 674  TKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLW 732

Query: 3289 TGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSE--------WKEGNMVEXXXXXXXX 3134
            +GKQVIT +LNHITRGR PFT +K+GKI    F SE         K+             
Sbjct: 733  SGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEK 792

Query: 3133 XXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMH 2954
                 KL+I KNELV GVIDK QF KYG+VH VQE YGSNTAGILLSVLSRLFTVFLQMH
Sbjct: 793  KHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMH 852

Query: 2953 GFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIA--EPVKLQMEIERAIRS 2780
            GFTCGVDDLLI  + D+ RK+ L+K EN G  +H KFIG+     +PVKLQ+E+E+ I S
Sbjct: 853  GFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILS 912

Query: 2779 HGESAVTYLDMLMSHELNGVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQI 2600
            +GE+A+T LD +M +ELN +T++VN  ++  GL+KPFP+NCLSLMTTTGAKGS VNF+QI
Sbjct: 913  NGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQI 972

Query: 2599 SSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGR 2420
            SS LGQQ LEGKRVPRMVSGKTLPCFPPWD AARAGGFI DRFLTGL PQEYYFHCMAGR
Sbjct: 973  SSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGR 1032

Query: 2419 EGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFI 2240
            EGLVDTA+KTSRSGYLQRCLIKNLECL+VCYD+TVRD+DGS+VQF YG+DGVDVH+ SFI
Sbjct: 1033 EGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFI 1092

Query: 2239 TEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQ 2060
            TEF+ LA N+ ++ EK     +   N Y+ +LP  LR K K FI    ++++D  +++KQ
Sbjct: 1093 TEFEALAVNEEVVCEKFG--QDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQ 1150

Query: 2059 KNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQ 1880
            K+ +NLVK KY+SSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GE+NVTLGIPRLQ
Sbjct: 1151 KDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQ 1210

Query: 1879 EILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGG 1700
            EIL  A+  I+TPIMTCPL+ G ++ +AERLAAKLK V+VADI ESMEV +VPF+V    
Sbjct: 1211 EILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQ 1270

Query: 1699 ASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAV 1520
              +IYKLKMKL+ P LYPP++ I+LEDCEETLE  F+RELED+IQ+H+ +LSKI GIK  
Sbjct: 1271 TCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNF 1330

Query: 1519 TNSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDY 1340
                    +KET E+  G                           DAQKRK QA DEMDY
Sbjct: 1331 LPDSRSMASKETDEDASGD--GLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDY 1388

Query: 1339 DDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQ-IFDAEDEA 1163
             D         E E  E E S G   EID VED        E EI   E+  I D +DE 
Sbjct: 1389 GDS--------EGEPDEGEPSAGLTEEIDLVED--------EVEISNNEEVGISDPKDED 1432

Query: 1162 PGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFRDE 983
               PSK    SK K++ +E K     RK R   IKK  DRAILV  KG  FE HF F +E
Sbjct: 1433 SKVPSKSKS-SKNKKAKTEAK-----RKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1486

Query: 982  PHXXXXXXXXXXXXKVYVKRSENIDRCSVIG--------YEEDNKKGE--------VTPS 851
            PH            KVY++ S  ID C VI         Y  D KK E          P+
Sbjct: 1487 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPA 1546

Query: 850  LQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVD 671
            LQTAGV+F AFW +QD LD+R + SN+++AMLNT+GVEAARATI+KEV+NVF  Y + V+
Sbjct: 1547 LQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1606

Query: 670  IRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESP 491
            IRHL+LIAD+MT  GGYRPMNR G      SP  KM+FETA+KFIVEAA HG  + LES 
Sbjct: 1607 IRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESA 1666

Query: 490  SARICLGLPVKMGTGCFDLM 431
            SARICLGLPVKMGTGCFDLM
Sbjct: 1667 SARICLGLPVKMGTGCFDLM 1686


>CBI29879.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1669

 Score = 1894 bits (4906), Expect = 0.0
 Identities = 1005/1700 (59%), Positives = 1198/1700 (70%), Gaps = 50/1700 (2%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            +FSFFTDEEVR +SFKKITSP+  D + RPVPGGL+D ALG +D+  PC+SCGQ +  CP
Sbjct: 16   KFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCP 75

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+ VYNPLLF +LH L++K CFFCHHF+     VQ Y SQL+LI KGD V  
Sbjct: 76   GHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGA 135

Query: 5026 RDLC-----------EEDGVTDTSVHTKERSSTSN---------WTSFQYHEVKSILNKF 4907
            ++L            + DG   +   T   S+  N         WTS Q  E  S+++ F
Sbjct: 136  KNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNF 195

Query: 4906 MGENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFM 4727
            +    + C+NC A +P++T PTFGWF M  + +A TRAN+I+G KL+             
Sbjct: 196  LKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPL---------- 245

Query: 4726 DGDAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSG 4547
                          N V++ +T  S A  DG+    + + + KG   P EF+KQ+   SG
Sbjct: 246  --------------NGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSG 291

Query: 4546 PLLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPP 4367
            PLLPSEV+++++ LWENEA LCS I DI Q+ L  +G     SMFF+E +LVPP KFRPP
Sbjct: 292  PLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPP 351

Query: 4366 SRKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAI 4187
            S+     +EHPQ+VLL  V+Q N++LG A+ NNSER KI++RWM+LQQ+INVLFD + A 
Sbjct: 352  SKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAA 411

Query: 4186 RQKDRGT-SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKL 4010
             Q  R T SGICQL+EKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L
Sbjct: 412  GQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 471

Query: 4009 TYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGA 3830
            TYPE+VTPWNV KLR A++NG EIHPGATHY DK S V+L                 RG 
Sbjct: 472  TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGV 531

Query: 3829 VTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 3650
            V  PG+S D+EFEGK+VYRH+QDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTLRMHYAN
Sbjct: 532  VAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYAN 591

Query: 3649 CSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLL 3470
            CSTYNADFDGDEMNVHFPQDEISRAEA  I NAN QYIVP+ G PIRGLIQDHIVSAVLL
Sbjct: 592  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLL 651

Query: 3469 TKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLW 3290
            TKKDTFLTR++Y+ LLY+SG+S+  SGS++GK G+KV  L S+DE+QPL P IWKP+PLW
Sbjct: 652  TKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLW 710

Query: 3289 TGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSE--------WKEGNMVEXXXXXXXX 3134
            +GKQVIT +LNHITRGR PFT +K+GKI    F SE         K+             
Sbjct: 711  SGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEK 770

Query: 3133 XXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMH 2954
                 KL+I KNELV GVIDK QF KYG+VH VQE YGSNTAGILLSVLSRLFTVFLQMH
Sbjct: 771  KHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMH 830

Query: 2953 GFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIA--EPVKLQMEIERAIRS 2780
            GFTCGVDDLLI  + D+ RK+ L+K EN G  +H KFIG+     +PVKLQ+E+E+ I S
Sbjct: 831  GFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILS 890

Query: 2779 HGESAVTYLDMLMSHELNGVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQI 2600
            +GE+A+T LD +M +ELN +T++VN  ++  GL+KPFP+NCLSLMTTTGAKGS VNF+QI
Sbjct: 891  NGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQI 950

Query: 2599 SSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGR 2420
            SS LGQQ LEGKRVPRMVSGKTLPCFPPWD AARAGGFI DRFLTGL PQEYYFHCMAGR
Sbjct: 951  SSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGR 1010

Query: 2419 EGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFI 2240
            EGLVDTA+KTSRSGYLQRCLIKNLECL+VCYD+TVRD+DGS+VQF YG+DGVDVH+ SFI
Sbjct: 1011 EGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFI 1070

Query: 2239 TEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQ 2060
            TEF+ LA N+ ++ EK     +   N Y+ +LP  LR K K FI    ++++D  +++KQ
Sbjct: 1071 TEFEALAVNEEVVCEKFG--QDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQ 1128

Query: 2059 KNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQ 1880
            K+ +NLVK KY+SSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GE+NVTLGIPRLQ
Sbjct: 1129 KDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQ 1188

Query: 1879 EILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGG 1700
            EIL  A+  I+TPIMTCPL+ G ++ +AERLAAKLK V+VADI ESMEV +VPF+V    
Sbjct: 1189 EILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQ 1248

Query: 1699 ASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAV 1520
              +IYKLKMKL+ P LYPP++ I+LEDCEETLE  F+RELED+IQ+H+ +LSKI GIK  
Sbjct: 1249 TCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNF 1308

Query: 1519 TNSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDY 1340
                    +KET E+  G                           DAQKRK QA DEMDY
Sbjct: 1309 LPDSRSMASKETDEDASGD--GLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDY 1366

Query: 1339 DDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQ-IFDAEDEA 1163
             D         E E  E E S G   EID VED        E EI   E+  I D +DE 
Sbjct: 1367 GDS--------EGEPDEGEPSAGLTEEIDLVED--------EVEISNNEEVGISDPKDED 1410

Query: 1162 PGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFRDE 983
               PSK    SK K++ +E K     RK R   IKK  DRAILV  KG  FE HF F +E
Sbjct: 1411 SKVPSKSKS-SKNKKAKTEAK-----RKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1464

Query: 982  PHXXXXXXXXXXXXKVYVKRSENIDRCSVIG--------YEEDNKKGE--------VTPS 851
            PH            KVY++ S  ID C VI         Y  D KK E          P+
Sbjct: 1465 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPA 1524

Query: 850  LQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVD 671
            LQTAGV+F AFW +QD LD+R + SN+++AMLNT+GVEAARATI+KEV+NVF  Y + V+
Sbjct: 1525 LQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1584

Query: 670  IRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESP 491
            IRHL+LIAD+MT  GGYRPMNR G      SP  KM+FETA+KFIVEAA HG  + LES 
Sbjct: 1585 IRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESA 1644

Query: 490  SARICLGLPVKMGTGCFDLM 431
            SARICLGLPVKMGTGCFDLM
Sbjct: 1645 SARICLGLPVKMGTGCFDLM 1664


>XP_008798769.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Phoenix
            dactylifera]
          Length = 1665

 Score = 1844 bits (4777), Expect = 0.0
 Identities = 990/1690 (58%), Positives = 1165/1690 (68%), Gaps = 38/1690 (2%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RFSF+T EE+R  S KKIT P   D  +  VP GL+D ALGP++D   CKSCGQ +  CP
Sbjct: 18   RFSFYTAEEIRKISVKKITKPDLLDSKNASVPDGLYDPALGPINDTDSCKSCGQLSFRCP 77

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVRD 5021
            GHCGHIDL  P+YNPLLFR L  L++  CFFC  FRL  EKVQ YA QL LI KGD V  
Sbjct: 78   GHCGHIDLARPLYNPLLFRNLQNLLQITCFFCRKFRLNEEKVQRYAEQLCLIAKGDIVGA 137

Query: 5020 LC------------EEDGVTDTSVHTKERSST-------SNWTSFQYHEVKSILNKFMGE 4898
                           E+     ++HT E  S          WTS Q+ E  SIL+KF+ E
Sbjct: 138  KTLEAHSWGEFYFPNEEETKSAAIHTSESLSKITNLKQQQTWTSLQHSEALSILSKFLRE 197

Query: 4897 NFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGD 4718
              KKC NC   NP ITSPTFGW     +  +D R+N I    L                +
Sbjct: 198  KSKKCANCSRKNPTITSPTFGWLNKA-IQASDIRSNFIMESDL-----------GLSSTE 245

Query: 4717 AQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGP-- 4544
             QN + +   G+S    D E S             K K +   LPPE  KQ  L SG   
Sbjct: 246  DQNTEGSQSRGDSASQLDEEPSSIT------KVQRKTKKQSRDLPPEIAKQM-LSSGQKK 298

Query: 4543 -LLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPP 4367
             LLPSEV+ +LK LW NEA++C+LI D+Q++SL   G+ +  +MFF++ LLVPP+KFRPP
Sbjct: 299  HLLPSEVEAILKDLWNNEAKICALICDVQRRSLNRLGRDKGYAMFFLKTLLVPPSKFRPP 358

Query: 4366 SRKNGMEV-EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKA 4190
            +      V EHPQ+VLLS V + N++L     N  +   IV  WM+LQ+ +N+LFDS K 
Sbjct: 359  AGSGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRSWMDLQRNVNLLFDSSKG 418

Query: 4189 IRQKDRGTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKL 4010
              + +R  +GI QL+EKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L
Sbjct: 419  WVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 478

Query: 4009 TYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGA 3830
            TYPERVTPWNVNKLRHA++NG +IHPGATHY D   + +L                 RG 
Sbjct: 479  TYPERVTPWNVNKLRHAIINGADIHPGATHYKDNERMYKLQLGRNMRNSISRKLPTSRGV 538

Query: 3829 VTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 3650
            +   GK  +SEFEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN
Sbjct: 539  LVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 598

Query: 3649 CSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLL 3470
            CSTYNADFDGDEMNVH PQDEISRAEAI I NANKQY+VPTSG PIRGLIQDHIVSAVLL
Sbjct: 599  CSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQDHIVSAVLL 658

Query: 3469 TKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLW 3290
            TK DTFLTR++YH LLYAS +   AS S  G+FG+ VCTLSSDDEIQPL P IWKP PLW
Sbjct: 659  TKLDTFLTREQYHQLLYASCMPPIAS-SQPGRFGRNVCTLSSDDEIQPLLPAIWKPIPLW 717

Query: 3289 TGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXKLI 3110
            TGKQVIT ILNHITRGRPPFTV+ +G+I       E+   N  E              L+
Sbjct: 718  TGKQVITAILNHITRGRPPFTVENKGRIP-----KEYLGKNHNELK------------LL 760

Query: 3109 IWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDD 2930
            I+ N+L+HG++DK QF KYG+VHT+ E YG++TAGILLSV SRLFT+FLQMHGFTCGVDD
Sbjct: 761  IYNNDLIHGMVDKAQFGKYGLVHTIHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDD 820

Query: 2929 LLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIAE--PVKLQMEIERAIRSHGESAVTY 2756
            LL+ Q SD++RK ILEK E    ++H +F   K  +  P+KLQ EIE+ +  + ESA T 
Sbjct: 821  LLLDQSSDMERKRILEKSEALSEDVHIRFTAFKDGDRDPMKLQREIEKVLCRNRESATTL 880

Query: 2755 LDMLMSHELNGVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLLGQQQ 2576
            LD +MS  +N +T+EVN  + P+GL KPF RNCLSLMTTTGAKG  VN TQISSLLGQQ+
Sbjct: 881  LDRMMSSSMNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQE 940

Query: 2575 LEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLVDTAI 2396
            LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLTGLRPQEYYFHCMAGR+GLVDTA+
Sbjct: 941  LEGKRVPRMVSGKTLPCFPPWDVSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAV 1000

Query: 2395 KTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFKLLAQ 2216
            KTSRSGYLQRCL+KNLECL+V YDHTVRDADGSV+QF YGEDGVDV K SFI+E   LA 
Sbjct: 1001 KTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAA 1060

Query: 2215 NQRIILEKLSGQHEDA----SNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQKNLM 2048
            NQ ++L++LS Q EDA    SN Y+ ELP  LR  A  F   LSK  + SLH  K+K+LM
Sbjct: 1061 NQTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTF-ARLSKNHQGSLHQIKRKDLM 1119

Query: 2047 NLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQEILQ 1868
             L+K KYLSSLA+PGE VGV+AAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQEIL 
Sbjct: 1120 KLMKLKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 1179

Query: 1867 RASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGASTI 1688
             AS  IRTP+MTCPL  G TR +AERLA+KL+ V +ADIVESMEVC VPF +H    STI
Sbjct: 1180 TASVDIRTPVMTCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTI 1239

Query: 1687 YKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVTNSE 1508
            YKLKM L+PPELYPP+S +TLEDC  TL   FI  +ED+I  H+ M+ KI  I +VT  E
Sbjct: 1240 YKLKMNLYPPELYPPHSSLTLEDCMITLRTDFIGAMEDAIAKHLDMICKISDISSVTAKE 1299

Query: 1507 EHNTTKETSEEEPGSIS---HQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
            E N  + T E+E GS S                           DA+KRK +A DEM+Y+
Sbjct: 1300 ESNLAEGTDEDEHGSKSTHGEDKDNSSGFDGVDDDDGINEDEGMDAEKRKKRASDEMEYE 1359

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFDAEDEAPG 1157
            DG+E +     DE  + E  +GFESEIDQVE D DYT+GG+   ME ED   + E+E P 
Sbjct: 1360 DGIEKESSAKADE-HDGETQSGFESEIDQVEADEDYTVGGDHS-MEVEDPSLEVEEEIPE 1417

Query: 1156 SPSKPDYLSKLKESNSELK------PKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFC 995
            SPSK +    L++   + K       K++  K      KKK +R I V  KGL FE H+ 
Sbjct: 1418 SPSKAEPTPTLEDGKKQQKLADSKESKSESNKTTTKPRKKKINRTIFVDAKGLNFEVHYI 1477

Query: 994  FRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIGYEEDNKKGEVTPSLQTAGVNFRAFW 815
            F+ EP              VYVK S+NI+ CSV   ++D        SLQTAGVNF+AFW
Sbjct: 1478 FKKEPRILLAEVAQKAAKSVYVKESKNIELCSVTEPKKDEPL-----SLQTAGVNFQAFW 1532

Query: 814  NLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVDIRHLTLIADYMT 635
            +L+D+LDI  I SNDI+AMLNTYGVEAARATI+KEV  VF  Y I V+IRHL LIAD+MT
Sbjct: 1533 DLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLMLIADFMT 1592

Query: 634  ADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESPSARICLGLPVKM 455
              GGYRPMNR GM D  TSP  KM+FETATKFIV +A HGEV+ L++PSA +CLG PVKM
Sbjct: 1593 FHGGYRPMNRIGMTDFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKM 1652

Query: 454  GTGCFDLMHN 425
            GTGCFDLM N
Sbjct: 1653 GTGCFDLMQN 1662


>XP_010922210.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Elaeis
            guineensis]
          Length = 1674

 Score = 1839 bits (4764), Expect = 0.0
 Identities = 997/1694 (58%), Positives = 1178/1694 (69%), Gaps = 42/1694 (2%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF F+T EE+R  S KKIT P   D  + PVP GL+D A+GP++D   CKSCGQ +  CP
Sbjct: 18   RFRFYTAEEIRRISVKKITKPDLLDSKNAPVPDGLYDPAMGPINDTDSCKSCGQLSFRCP 77

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDL  P+YNPLLFR L  L++  CFFC  FRL  EKVQ YA QLDLI KGD V  
Sbjct: 78   GHCGHIDLAKPLYNPLLFRNLQNLLQITCFFCRRFRLNEEKVQRYAEQLDLIAKGDVVGA 137

Query: 5026 RDL---------CEEDGVTDTSVHTKERS--------STSNWTSFQYHEVKSILNKFMGE 4898
            R L           + G T+++V +   S            WTS QY E  SI++KF+ E
Sbjct: 138  RTLEAHSWGEYYFPDGGETESAVISTNESLLKITNLKQQQTWTSLQYSEAISIMSKFLRE 197

Query: 4897 NFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGD 4718
              KKC NCG  NP ITSPTFGW     M  +D R N I G  L                +
Sbjct: 198  KSKKCANCGRKNPTITSPTFGWLNKA-MQASDIRTNFIIGYDL-----------GLSSTE 245

Query: 4717 AQNADDTMLGGNSVESHDTELSGAVD-DGMPGNASI---KHKSKGGPLPPEFLKQRKLLS 4550
             QNA+ +   G+S    D E S     +G     S    K K +   LPPE  KQ  L S
Sbjct: 246  DQNAEGSQPRGDSASQTDEEPSSTAKVEGKTKKQSRNLQKTKKQSRDLPPEIAKQI-LSS 304

Query: 4549 GP---LLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNK 4379
            G    LLPSEV+ +LK LW+N+A++C+LI D+Q++SL  +G+ +  +MFF++ LLVPP+K
Sbjct: 305  GQKKHLLPSEVEAILKDLWKNQAKICALICDLQRRSLNASGRDKGYAMFFLKTLLVPPSK 364

Query: 4378 FRPPSRKNGMEV-EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFD 4202
            FRPP+      V EHPQ+VLLS V + N++L     +  +   IV RWM+LQ+ +NVLFD
Sbjct: 365  FRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVITDGPDHPDIVRRWMDLQRNVNVLFD 424

Query: 4201 SRKAIRQKDRGTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYF 4022
            S K   + +R  +GI QL+EKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYF
Sbjct: 425  STKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYF 484

Query: 4021 AVKLTYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXX 3842
            A++LTYPERVTPWNVNKLR+A++NG +IHPGATHY DK  + +L                
Sbjct: 485  ALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISRKLPT 544

Query: 3841 XRGAVTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRM 3662
             +G +   GK  +SEFEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRM
Sbjct: 545  SKGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRM 604

Query: 3661 HYANCSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVS 3482
            HYANCSTYNADFDGDEMNVH PQDEISRAEAI I NANKQY+VPTSG PIRGLIQDHIVS
Sbjct: 605  HYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQDHIVS 664

Query: 3481 AVLLTKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKP 3302
            AVLLTK DTFLTR+EYH LLYAS +   AS S  G+FG+KVCTLSSD EIQPL P IWKP
Sbjct: 665  AVLLTKLDTFLTREEYHQLLYASFMPPIAS-SQPGRFGRKVCTLSSDAEIQPLLPAIWKP 723

Query: 3301 KPLWTGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXX 3122
             PLWTGKQVIT ILNHITRGRPPFTV+ +G+I       +  E                 
Sbjct: 724  IPLWTGKQVITAILNHITRGRPPFTVENKGRIPKEYLGKDHNE----------------- 766

Query: 3121 XKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTC 2942
             KL+I+KN+L+HG++DK QF KYG+VHTV E YG++TAGILLSV SRLFT+FLQMHGFTC
Sbjct: 767  LKLLIYKNDLIHGMVDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTC 826

Query: 2941 GVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIAE--PVKLQMEIERAIRSHGES 2768
            GVDDLL+ Q SD++RK ILEK E    ++H +F   K  +  PVKLQ EIE+ +  + ES
Sbjct: 827  GVDDLLLDQSSDMERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQREIEKTLCRNRES 886

Query: 2767 AVTYLDMLMSHELNGVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLL 2588
            A   LD +MS  +N +T+EVN  + P+GL KPF RNCLSLMTTTGAKG  VN TQISSLL
Sbjct: 887  ATASLDRMMSSSMNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLL 946

Query: 2587 GQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLV 2408
            GQQ+LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLTGLRPQEYYFHCMAGR+GLV
Sbjct: 947  GQQELEGKRVPRMVSGKTLPCFPPWDISCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLV 1006

Query: 2407 DTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFK 2228
            DTA+KTSRSGYLQRCL+KNLECL+V YDHTVRDADGSV+QF YGEDGVDV K SFI+E  
Sbjct: 1007 DTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELG 1066

Query: 2227 LLAQNQRIILEKLSGQHEDA----SNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQ 2060
             LA NQ ++L++LS Q EDA    SN Y+ ELP  LR  A  F   LSK  + SL   ++
Sbjct: 1067 ALAANQTVVLDRLSSQLEDAHLSKSNGYLKELPYLLRENATTF-ARLSKNHQGSLRQIRR 1125

Query: 2059 KNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQ 1880
            K+LM L+K KYLSSLA+PGE VGV+AAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQ
Sbjct: 1126 KDLMKLMKLKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQ 1185

Query: 1879 EILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGG 1700
            EIL  ASA IRTP+M CPL  G TR  AE+LA+KL+ V +ADIVESMEVC VPF +H   
Sbjct: 1186 EILMTASADIRTPVMKCPLHDGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNE 1245

Query: 1699 ASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAV 1520
             STIYKL+M L+PPELYPP+SD+TLEDC  TL   FI  +ED+I  H+ M+ KI  I +V
Sbjct: 1246 VSTIYKLRMNLYPPELYPPHSDLTLEDCMTTLRTYFIDAMEDAIAKHLDMICKISDINSV 1305

Query: 1519 TNSEEHNTTKETSEEEPGSIS---HQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDE 1349
            T   E N  + T E+E GS S                           DA+KRK +A DE
Sbjct: 1306 TAKGESNLEEGTDEDEHGSKSTHREDKDNSRGFDDVDDDDGINEDEGMDAEKRKKRASDE 1365

Query: 1348 MDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFDAED 1169
            M+Y+DG+E +     DE  + E  +GFESEIDQVE D DYT+GG+   ME ED   +AE 
Sbjct: 1366 MEYEDGIEKENSAKADE-HDGETQSGFESEIDQVEADEDYTVGGDPS-MEVEDPSLEAE- 1422

Query: 1168 EAPGSPSKPDYLSKLKESNSELK------PKAKQRKGRGHLIKKKTDRAILVVIKGLKFE 1007
            E P SPSK +    L++   + K       K++ +K      KKK +R I V  KGL FE
Sbjct: 1423 ETPESPSKAEPTPTLEDGKKKQKLADNKESKSESKKKTTKPRKKKINRTIFVDAKGLTFE 1482

Query: 1006 AHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIGYEEDNKKGEVTPSLQTAGVNF 827
             H+ F+ EP              VYVK S+NI+ CSV     + KK E   SLQTAGVNF
Sbjct: 1483 VHYIFKKEPRILLAEVAQKAAKSVYVKESKNIELCSV----PEPKKDEPL-SLQTAGVNF 1537

Query: 826  RAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVDIRHLTLIA 647
            +AFW+L+D+LDI  I SNDI+AMLNTYGVEAARATI+KEV  VF  Y I V+IRHLTLIA
Sbjct: 1538 QAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLTLIA 1597

Query: 646  DYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESPSARICLGL 467
            D+MT  GGYRPMNR GM +  TSP  KM+FETATKFIV +A HGEV+ L++PSA +CLG 
Sbjct: 1598 DFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQ 1657

Query: 466  PVKMGTGCFDLMHN 425
            PVKMGTGCFDLM N
Sbjct: 1658 PVKMGTGCFDLMQN 1671


>AIO05696.1 putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score = 1833 bits (4749), Expect = 0.0
 Identities = 989/1690 (58%), Positives = 1171/1690 (69%), Gaps = 39/1690 (2%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            F F+T EE+R  S KKIT P   D  + PVP GL+D A+GP++D   CKSCGQ +  CPG
Sbjct: 19   FHFYTAEEIRKISVKKITKPGLLDSKNAPVPDGLYDPAMGPINDTDSCKSCGQLSFRCPG 78

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV--R 5024
            HCGHIDL   +YNPLLFR L  L++  CFFCH FRL  EKVQ YA QLDLI KGD V  R
Sbjct: 79   HCGHIDLAKQLYNPLLFRNLQNLLQITCFFCHRFRLNEEKVQRYAKQLDLIAKGDIVGAR 138

Query: 5023 DLCEEDGVTDTSVHTKERSSTSN--------------WTSFQYHEVKSILNKFMGENFKK 4886
             L            TK    ++N              WTS QY E  SI++KF+ E  KK
Sbjct: 139  TLEARSWGFPEGEETKSAVISTNESLLKITNLKQQQTWTSLQYSEALSIMSKFLREKSKK 198

Query: 4885 CQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNA 4706
            C NCG  NP ITSPTFGW     M  +D R N I G  L                + QNA
Sbjct: 199  CANCGRKNPTITSPTFGWLNKA-MQASDIRTNFIIGYDL-----------GLSSTEDQNA 246

Query: 4705 DDTMLGGNSVESHDTELSGAVDDGMPGNASI----KHKSKGGPLPPEFLKQRKLLSGP-- 4544
            + +   G+S    D E S                 K K +   LPPE  KQ  L SG   
Sbjct: 247  EASQSRGDSASQTDEEPSSIAKVERKTKKQSRDLQKTKKQSMDLPPEIAKQM-LSSGQKK 305

Query: 4543 -LLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPP 4367
             LLPSEV+ +LK LW+N+A++C+L+ D+Q +SL  +G+ +  +MFF++ LLVPP+KFRPP
Sbjct: 306  HLLPSEVEAILKDLWKNQAKICALMCDLQHRSLNASGRDKGYAMFFLKTLLVPPSKFRPP 365

Query: 4366 SRKNGMEV-EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKA 4190
            +      V EHPQ+VLLS V + N++L     N  +   IV RWM+LQ+ +NVLFDS K 
Sbjct: 366  AGSGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRRWMDLQRNVNVLFDSTKG 425

Query: 4189 IRQKDRGTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKL 4010
              + +R  +GI QL+EKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L
Sbjct: 426  WVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 485

Query: 4009 TYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGA 3830
            TYPERVTPWNVNKLR+A++NG +IHPGATHY DK  + +L                 RG 
Sbjct: 486  TYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISRKLPTSRGV 545

Query: 3829 VTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 3650
            +   GK  +SEFEGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN
Sbjct: 546  LVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYAN 605

Query: 3649 CSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLL 3470
            CSTYNADFDGDEMNVH PQDEISRAEAI I NANKQYIVPTSG PIRGLIQDHIVSAVLL
Sbjct: 606  CSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQDHIVSAVLL 665

Query: 3469 TKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLW 3290
            TK DTFLTR+EYH LLYAS +   AS S  G+FG+KVC LS DDEIQPL P IWKP PLW
Sbjct: 666  TKLDTFLTREEYHQLLYASFMPPIAS-SQPGRFGRKVCILSLDDEIQPLLPAIWKPIPLW 724

Query: 3289 TGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXKLI 3110
            TGKQVIT ILNHIT+GRPPFTV+ +G+I       +  E                  KL+
Sbjct: 725  TGKQVITAILNHITQGRPPFTVENKGRIPKEYLGKDHNE-----------------LKLL 767

Query: 3109 IWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDD 2930
            I+KN+L+HG+IDK QF KYG+VHTV E YG++TAGILLSV SRLFT+FLQMHGFTCGVDD
Sbjct: 768  IYKNDLIHGMIDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDD 827

Query: 2929 LLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIAE--PVKLQMEIERAIRSHGESAVTY 2756
            LL+ Q SD++RK ILEK E    ++H +F   K  +  PVKLQMEIE   R+  ESA T 
Sbjct: 828  LLLDQSSDMERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQMEIEVLCRNR-ESATTL 886

Query: 2755 LDMLMSHELNGVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLLGQQQ 2576
            LD +MS  +N +T+EVN  + P+GL KPF RNCLSLMTTTGAKG  VN TQISSLLGQQ+
Sbjct: 887  LDRMMSSSMNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQE 946

Query: 2575 LEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLVDTAI 2396
            LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFL+GLRPQEYYFHCMAGR+GLVDTA+
Sbjct: 947  LEGKRVPRMVSGKTLPCFPPWDISCRAGGFISDRFLSGLRPQEYYFHCMAGRDGLVDTAV 1006

Query: 2395 KTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFKLLAQ 2216
            KTSRSGYLQRCL+KNLECL+V YDHTVRDADGSV+QF YGEDGVDV K SFI+E   LA 
Sbjct: 1007 KTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAA 1066

Query: 2215 NQRIILEKLSGQHEDA----SNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQKNLM 2048
            NQ ++L++LS Q EDA    SN Y+ ELP  LR  A  F   LSK  + SLH  ++++LM
Sbjct: 1067 NQTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTF-ARLSKNHQGSLHQIRRRDLM 1125

Query: 2047 NLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQEILQ 1868
             L+K KY+SSLA+PGE VGV+AAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQEIL 
Sbjct: 1126 KLMKLKYMSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM 1185

Query: 1867 RASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGASTI 1688
             ASA IRTP+M CPL  G TR +AERLA+KL+ V +ADIVESMEVC VPF +H    STI
Sbjct: 1186 TASADIRTPVMKCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTI 1245

Query: 1687 YKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVTNSE 1508
            YKL+M L+PPELYP +SD+TLEDC  TL  +FI ++ED+I  H+ M+ KI  I +VT   
Sbjct: 1246 YKLRMNLYPPELYPQHSDLTLEDCMTTLRTNFIDDMEDAIAKHLDMICKISDINSVTAKG 1305

Query: 1507 EHNTTKETSEEEPGSIS---HQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
            E N  + T E E GS S                           DA+KRK +A DEM+Y+
Sbjct: 1306 ESNLAEGTDEGEHGSKSTHGEDKDNSRGFDDVDDDDGINEDEGMDAEKRKQRASDEMEYE 1365

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFDAEDEAPG 1157
            DG+E +     DE  + +  +GFESEIDQVE D DYT+GG+   ME ED   + E E P 
Sbjct: 1366 DGIEKESSAKADE-HDGDTQSGFESEIDQVEADEDYTVGGDPS-MEVEDPSLEVE-ETPE 1422

Query: 1156 SPSKPDYLSKLKESNSELK------PKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFC 995
            SPSK +    L++   + K       K++ +K +    KKK +R I V  KGLKFE H+ 
Sbjct: 1423 SPSKAEPTPTLEDGKKKQKLADSKESKSESKKKKTKSRKKKINRTIFVDAKGLKFEVHYI 1482

Query: 994  FRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIGYEEDNKKGEVTPSLQTAGVNFRAFW 815
            F++EP              VYV+ S+NI+ CSV   ++D        SLQTAGVNF+AFW
Sbjct: 1483 FKEEPRILLAEVAQKTAKSVYVRDSKNIELCSVAEPKKDEPL-----SLQTAGVNFQAFW 1537

Query: 814  NLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVDIRHLTLIADYMT 635
            +L+D+LD+  I SNDI+AMLNTYGVE ARATI+KEV  VF  Y I V+IRHLTLIAD+MT
Sbjct: 1538 DLEDHLDVNKITSNDIHAMLNTYGVEVARATIIKEVKGVFDAYGIRVNIRHLTLIADFMT 1597

Query: 634  ADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESPSARICLGLPVKM 455
              GGYRPMNR GM +  TSP  KM+FETATKFIV +A HGEV+ L++PSA +CLG PVKM
Sbjct: 1598 FHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAFHGEVDALDAPSASVCLGQPVKM 1657

Query: 454  GTGCFDLMHN 425
            GTGCFDLM N
Sbjct: 1658 GTGCFDLMQN 1667


>XP_015579396.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
            [Ricinus communis]
          Length = 1681

 Score = 1789 bits (4634), Expect = 0.0
 Identities = 972/1708 (56%), Positives = 1175/1708 (68%), Gaps = 59/1708 (3%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            FSF TDEEVR HSF KIT+P   D + RPVPGGL+D ALGP+ +   CK+CGQ +  CPG
Sbjct: 16   FSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKTCGQRSTNCPG 75

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV--- 5027
            HCGHIDLV+PVYNPLLF  LH L+++ CF C HFR++R +V+    QL+LI+KGD V   
Sbjct: 76   HCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAK 135

Query: 5026 ---------------RDLCEEDGVTDTS---VHTKERSSTSNWTSFQYHEVKSILNKFMG 4901
                            DL  E   T  S    +  E +    WTS Q+ E  S+LN F+ 
Sbjct: 136  RLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLK 195

Query: 4900 ENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDG 4721
              FKKC+NC ++NP IT PTFGWF    M +A  RAN+I G +L                
Sbjct: 196  PKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGG-------------- 241

Query: 4720 DAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPL 4541
                     L G+ +E   T++  A + G   + + KHK K      EF +Q+   S  L
Sbjct: 242  ---------LLGSEIEG-TTDVEDAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSKQL 291

Query: 4540 LPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSS-SMFFIEALLVPPNKFRPPS 4364
            LPSEVK  L+LLW+NEAR+CS I D+QQQ     GK ++  +MFF+E +LVPP KFRPP+
Sbjct: 292  LPSEVKEKLELLWKNEARICSFISDLQQQEF---GKRKAGPAMFFLETILVPPIKFRPPT 348

Query: 4363 RKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAIR 4184
            +     +EHPQ+VLLS V+Q N+SLG A++N  E  KIV RW++LQQ+IN LFDS+ A  
Sbjct: 349  KGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKG 407

Query: 4183 QKDR-GTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLT 4007
               R G  GICQL+EKKEG+FRQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FAVKLT
Sbjct: 408  PGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLT 467

Query: 4006 YPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAV 3827
            YPERVTPWN+ KLR+A++NG+E HPGATHY DK SI +LP                RGAV
Sbjct: 468  YPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAV 527

Query: 3826 THPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANC 3647
            T  GK  + EFEGK+VYRH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTLRMHYANC
Sbjct: 528  TQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANC 587

Query: 3646 STYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLT 3467
            STYNADFDGDEMNVHFPQDE+SRAEA  I NAN Q++ P++G P+RGLIQDHIVSAVLLT
Sbjct: 588  STYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLT 647

Query: 3466 KKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWT 3287
            KKDTFL++DE++ LLY+SGVST    S+ G+ GQKV    S+DEIQ LPP IWKPKPLWT
Sbjct: 648  KKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWT 707

Query: 3286 GKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVE----XXXXXXXXXXXXX 3119
            GKQVIT ILNHIT   PPFTV+K+ KI    F S   E    +                 
Sbjct: 708  GKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDEE 767

Query: 3118 KLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCG 2939
            K++++KNELV GVIDK QF +YG+VHTV E  GS+TAGILLSVLSRLFT +LQMHGFTCG
Sbjct: 768  KMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTCG 827

Query: 2938 VDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAK----IAEPVKLQMEIERAIRSHGE 2771
            VDDLLI+ + D +RK  LE  E +G  +H  FIG K      +PV +Q+ IE+ IRS G+
Sbjct: 828  VDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGD 887

Query: 2770 SAVTYLDMLMSHELNGVTTE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISS 2594
            SA+ YLD  MS+ELN  T+  V   ++ +GLLKP  +NC+SLMTT+GAKGS+VNF QISS
Sbjct: 888  SALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISS 947

Query: 2593 LLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREG 2414
             LGQQ+LEGKRVPRMVSGKTLPCF PWD AAR+GG+I DRFLTGLRPQEYYFHCMAGREG
Sbjct: 948  FLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREG 1007

Query: 2413 LVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITE 2234
            LVDTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGSVVQF YGEDGVDVH+ SFI +
Sbjct: 1008 LVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAK 1067

Query: 2233 FKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQKN 2054
            FK LA NQ +I ++  GQ   A N Y++ELP+AL+ KA  F+   S   R + +L K+++
Sbjct: 1068 FKELALNQDMIYKRSGGQ-LGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKRED 1126

Query: 2053 LMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQEI 1874
            L NL+K K+L SLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQEI
Sbjct: 1127 LYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 1186

Query: 1873 LQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGAS 1694
            L  AS  I+TPIMTCPL++G T  +A+ LA KL+ V+VADIVESMEV VVPF++  GG  
Sbjct: 1187 LMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVC 1246

Query: 1693 TIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVTN 1514
             IYKLKMKL+ P  YP Y++I++ED EETLEV F+RELED+IQ+H+ +LS+I GIK    
Sbjct: 1247 RIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLP 1306

Query: 1513 SEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYDD 1334
                  + E  E+  G +SH+                      DAQKRK QA DEMDYDD
Sbjct: 1307 ESRSRASGEADEDVAGDMSHR--EERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDD 1364

Query: 1333 GMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFD--AEDEAP 1160
            G E +  + E E   SE+ +GFESEIDQ          G++E     D + D  A +  P
Sbjct: 1365 GFEEE--LNEGESTASEEESGFESEIDQ----------GDNETEISNDVMLDNEASETLP 1412

Query: 1159 -GSPSKPDYLSKLKESNS--------ELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFE 1007
               PSKP    K  ES S        + KPKAK RK R   I K  DRAI V  + + FE
Sbjct: 1413 LRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAK-RKSR---ISKDFDRAIFVEARKMHFE 1468

Query: 1006 AHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK------ 869
             HF F +EPH            KVY++    I++C         VI Y +D K+      
Sbjct: 1469 VHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKP 1528

Query: 868  --GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVF 695
               E  P+L   GV+F  FW +QD+LD+R I SN+I+AML TYGVEAAR TI++E+ +VF
Sbjct: 1529 DVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVF 1588

Query: 694  KPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHG 515
            K Y I+V  RHL+LIAD+MT  GGYRPM+R G      SP  KMSFETA+KFIVEAALHG
Sbjct: 1589 KSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHG 1648

Query: 514  EVERLESPSARICLGLPVKMGTGCFDLM 431
            E++ LE+PSARICLGLPVKMGTG FDLM
Sbjct: 1649 EIDNLETPSARICLGLPVKMGTGSFDLM 1676


>EEF35648.1 DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis]
          Length = 1686

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 971/1709 (56%), Positives = 1174/1709 (68%), Gaps = 60/1709 (3%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            FSF TDEEVR HSF KIT+P   D + RPVPGGL+D ALGP+ +   CK+CGQ +  CPG
Sbjct: 20   FSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKTCGQRSTNCPG 79

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV--- 5027
            HCGHIDLV+PVYNPLLF  LH L+++ CF C HFR++R +V+    QL+LI+KGD V   
Sbjct: 80   HCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAK 139

Query: 5026 ---------------RDLCEEDGVTDTS---VHTKERSSTSNWTSFQYHEVKSILNKFMG 4901
                            DL  E   T  S    +  E +    WTS Q+ E  S+LN F+ 
Sbjct: 140  RLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLK 199

Query: 4900 ENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDG 4721
              FKKC+NC ++NP IT PTFGWF    M +A  RAN+I G +L                
Sbjct: 200  PKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGG-------------- 245

Query: 4720 DAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPL 4541
                     L G+ +E   T++  A + G   + + KHK K      EF +Q+   S  L
Sbjct: 246  ---------LLGSEIEG-TTDVEDAAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSKQL 295

Query: 4540 LPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSS-SMFFIEALLVPPNKFRPPS 4364
            LPSEVK  L+LLW+NEAR+CS I D+QQQ     GK ++  +MFF+E +LVPP KFRPP+
Sbjct: 296  LPSEVKEKLELLWKNEARICSFISDLQQQEF---GKRKAGPAMFFLETILVPPIKFRPPT 352

Query: 4363 RKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAIR 4184
            +     +EHPQ+VLLS V+Q N+SLG A++N  E  KIV RW++LQQ+IN LFDS+ A  
Sbjct: 353  KGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKG 411

Query: 4183 QKDR-GTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLT 4007
               R G  GICQL+EKKEG+FRQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FAVKLT
Sbjct: 412  PGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLT 471

Query: 4006 YPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAV 3827
            YPERVTPWN+ KLR+A++NG+E HPGATHY DK SI +LP                RGAV
Sbjct: 472  YPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAV 531

Query: 3826 THPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANC 3647
            T  GK  + EFEGK+VYRH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKTLRMHYANC
Sbjct: 532  TQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANC 591

Query: 3646 S-TYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLL 3470
            S TYNADFDGDEMNVHFPQDE+SRAEA  I NAN Q++ P++G P+RGLIQDHIVSAVLL
Sbjct: 592  SITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLL 651

Query: 3469 TKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLW 3290
            TKKDTFL++DE++ LLY+SGVST    S+ G+ GQKV    S+DEIQ LPP IWKPKPLW
Sbjct: 652  TKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLW 711

Query: 3289 TGKQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXK-- 3116
            TGKQVIT ILNHIT   PPFTV+K+ KI    F S   E    +                
Sbjct: 712  TGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDE 771

Query: 3115 --LIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTC 2942
              ++++KNELV GVIDK QF +YG+VHTV E  GS+TAGILLSVLSRLFT +LQMHGFTC
Sbjct: 772  EKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTC 831

Query: 2941 GVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIA----EPVKLQMEIERAIRSHG 2774
            GVDDLLI+ + D +RK  LE  E +G  +H  FIG K      +PV +Q+ IE+ IRS G
Sbjct: 832  GVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDG 891

Query: 2773 ESAVTYLDMLMSHELNGVTTE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQIS 2597
            +SA+ YLD  MS+ELN  T+  V   ++ +GLLKP  +NC+SLMTT+GAKGS+VNF QIS
Sbjct: 892  DSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQIS 951

Query: 2596 SLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGRE 2417
            S LGQQ+LEGKRVPRMVSGKTLPCF PWD AAR+GG+I DRFLTGLRPQEYYFHCMAGRE
Sbjct: 952  SFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGRE 1011

Query: 2416 GLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFIT 2237
            GLVDTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGSVVQF YGEDGVDVH+ SFI 
Sbjct: 1012 GLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIA 1071

Query: 2236 EFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQK 2057
            +FK LA NQ +I ++  GQ   A N Y++ELP+AL+ KA  F+   S   R + +L K++
Sbjct: 1072 KFKELALNQDMIYKRSGGQ-LGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKRE 1130

Query: 2056 NLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQE 1877
            +L NL+K K+L SLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQE
Sbjct: 1131 DLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1190

Query: 1876 ILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGA 1697
            IL  AS  I+TPIMTCPL++G T  +A+ LA KL+ V+VADIVESMEV VVPF++  GG 
Sbjct: 1191 ILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGV 1250

Query: 1696 STIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVT 1517
              IYKLKMKL+ P  YP Y++I++ED EETLEV F+RELED+IQ+H+ +LS+I GIK   
Sbjct: 1251 CRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFL 1310

Query: 1516 NSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
                   + E  E+  G +SH+                      DAQKRK QA DEMDYD
Sbjct: 1311 PESRSRASGEADEDVAGDMSHR--EERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYD 1368

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFD--AEDEA 1163
            DG E +  + E E   SE+ +GFESEIDQ          G++E     D + D  A +  
Sbjct: 1369 DGFEEE--LNEGESTASEEESGFESEIDQ----------GDNETEISNDVMLDNEASETL 1416

Query: 1162 P-GSPSKPDYLSKLKESNS--------ELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKF 1010
            P   PSKP    K  ES S        + KPKAK RK R   I K  DRAI V  + + F
Sbjct: 1417 PLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAK-RKSR---ISKDFDRAIFVEARKMHF 1472

Query: 1009 EAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK----- 869
            E HF F +EPH            KVY++    I++C         VI Y +D K+     
Sbjct: 1473 EVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLK 1532

Query: 868  ---GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNV 698
                E  P+L   GV+F  FW +QD+LD+R I SN+I+AML TYGVEAAR TI++E+ +V
Sbjct: 1533 PDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHV 1592

Query: 697  FKPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALH 518
            FK Y I+V  RHL+LIAD+MT  GGYRPM+R G      SP  KMSFETA+KFIVEAALH
Sbjct: 1593 FKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALH 1652

Query: 517  GEVERLESPSARICLGLPVKMGTGCFDLM 431
            GE++ LE+PSARICLGLPVKMGTG FDLM
Sbjct: 1653 GEIDNLETPSARICLGLPVKMGTGSFDLM 1681


>XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] KJB19219.1 hypothetical protein
            B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score = 1776 bits (4600), Expect = 0.0
 Identities = 961/1702 (56%), Positives = 1165/1702 (68%), Gaps = 51/1702 (2%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            F+F T EEVR HS  K+T+    D M+RP+PGGL+D  LGP++D  PCKSCG   L CPG
Sbjct: 17   FNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLEDRTPCKSCGLLKLHCPG 76

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVRDL 5018
            HCGHIDLV+P+YNPLLF  LHTLI++ CFFC+HFR  R +V+   SQL LI KGD V   
Sbjct: 77   HCGHIDLVSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKCISQLKLIGKGDIVGAK 136

Query: 5017 CEEDGVTDTS---------------VHTKERSSTSNWTSFQYHEVKSILNKFMGENFKKC 4883
              +    D+S               +H  E  +   WTS Q  E  S+LNKF+   +K+C
Sbjct: 137  RLDSDSKDSSSHPENSEGCQKLGSRLHESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRC 196

Query: 4882 QNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNAD 4703
            +NC A NP IT PTFGWF    M  +  R N+I+GCK+ +TF    E  S ++ DA +A 
Sbjct: 197  KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTF--SGEVGSDIE-DANDAS 253

Query: 4702 DTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVK 4523
             +  G +  ++   E+     DG    A  K K     +P EFLKQ+ L SGPLLPSEVK
Sbjct: 254  SSEEGVDITKTKTPEIGFKGADGTSAKARKKAK-----VPLEFLKQKNLFSGPLLPSEVK 308

Query: 4522 NLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEV 4343
             ++KLLWENE  LCSLI  IQQQ     G+    SMFF+E +LVPP KFR P++     +
Sbjct: 309  KVMKLLWENEIELCSLINCIQQQGF---GEKVGYSMFFLETVLVPPIKFRAPTKGGDSVM 365

Query: 4342 EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRGT 4166
            EHPQ+VLLS V+Q N+SLG AY N+ +  K++ R WM+LQQ+IN+LFDS+ A+ Q+   +
Sbjct: 366  EHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVS 425

Query: 4165 SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTP 3986
             GICQL+E+KEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVTP
Sbjct: 426  PGICQLLERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 485

Query: 3985 WNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSL 3806
            WNV KLR A++NG+E+HPGATHY DK S  RLP                R A+T PGK+ 
Sbjct: 486  WNVVKLREAIINGSELHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRAAITQPGKNF 545

Query: 3805 DSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADF 3626
            D EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNADF
Sbjct: 546  DYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADF 605

Query: 3625 DGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLT 3446
            DGDE+NVHFPQDEISRAEA  I NAN QY+ P++G P+R LIQDHIVSAVLLTK+DTFL+
Sbjct: 606  DGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLS 665

Query: 3445 RDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITT 3266
            RDE++ LLY+SGVS  A    +GK GQKV   SS++ + P+ P I KPKPLWTGKQVIT 
Sbjct: 666  RDEFNQLLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPILPAILKPKPLWTGKQVITA 725

Query: 3265 ILNHITRGRPPFTVKKEGKIEDGCFYSEWKE------GNMVEXXXXXXXXXXXXXKLIIW 3104
            +LNHITRGRPPFTV+K GK     F +   E      G   +             K++I+
Sbjct: 726  VLNHITRGRPPFTVEKTGKTPRDFFKNRSNENKPKSVGQEGKDAEENSNKEPDEEKILIY 785

Query: 3103 KNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLL 2924
            KN+LV GVIDK QFA YG+VHTVQE YGSNTAG LLSV SRLFTVFLQMHGFTCGVDDLL
Sbjct: 786  KNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRLFTVFLQMHGFTCGVDDLL 845

Query: 2923 IVQHSDLKRKMILEKHENTGANIHSKFIGAKI---AEPVKLQMEIERAIRSHGESAVTYL 2753
            I+   D++RK  LE+ E      H +F   K+     P++LQ++IE+ IR  GE+A+T L
Sbjct: 846  IMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIELQLKIEKTIRRDGEAALTAL 905

Query: 2752 DMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLL 2588
            D  M   LN     GV TE    ++  GL+KP  RNC+SLMTTTGAKGS+VNF QISS L
Sbjct: 906  DRTMISVLNKNSSQGVLTE----LLSEGLVKPMGRNCISLMTTTGAKGSKVNFQQISSFL 961

Query: 2587 GQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLV 2408
            GQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFLTGLRPQEYYFHCMAGREGLV
Sbjct: 962  GQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQEYYFHCMAGREGLV 1021

Query: 2407 DTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFK 2228
            DTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH+ SF+T+F+
Sbjct: 1022 DTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGEDGIDVHQTSFVTKFE 1081

Query: 2227 LLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQK 2057
             LA N  ++ EKLS   G+  D+       LPD LR KA  FI    ++K       K K
Sbjct: 1082 ALALNCDVMSEKLSSMLGEPYDSGKI----LPDDLRDKAVQFIKDNRQQK------IKTK 1131

Query: 2056 NLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQE 1877
            N + L+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQE
Sbjct: 1132 NFLKLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1191

Query: 1876 ILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGA 1697
            IL  AS  I+TP+MTCPL KG T+ +A RLA K+K ++VA+I+ESM V V PF++H G  
Sbjct: 1192 ILMTASIDIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESMGVSVTPFAIHNGDI 1251

Query: 1696 STIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVT 1517
             +IYKLKM+L  P  Y   SDIT+ DC+  LEV F+RELED+IQ+H+ +LS+I GIK   
Sbjct: 1252 CSIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFM 1311

Query: 1516 NSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
                 N + ET E+ P S SH+                      DAQK+K QA DEMDY+
Sbjct: 1312 PDSRPNASSETDEDVPESRSHET----ENDDDTDDEGRAEDLGLDAQKQKQQATDEMDYE 1367

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDG----DYTLGGESEIMEGEDQIFDAED 1169
            DG        E+E  E     G ESE D  ED+     +  +G ++E    +D IF    
Sbjct: 1368 DGS-------EEEQNEGASLAGLESENDMSEDENGTIENNVIGSDNE----KDDIFH--- 1413

Query: 1168 EAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFR 989
               GSP+  D  SKLK      + + K++K RG  I+K+TDRAI    KGL FE HF F 
Sbjct: 1414 ---GSPNAEDG-SKLKSREGNTRAEPKRKKMRGKFIRKETDRAIFSATKGLVFEVHFKFV 1469

Query: 988  DEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKKGEV------TPS 851
            +EPH            KVY++    ID+C         V  Y ED K+ +        P+
Sbjct: 1470 NEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSGKANIPA 1529

Query: 850  LQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVD 671
            L TAGV+F AFW ++ +LD+R + SN+I+AMLNTYGVEAAR TI+ E+ NVF  Y I V+
Sbjct: 1530 LHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTSYGIGVN 1589

Query: 670  IRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESP 491
            IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIV+AA HG V+ LE+P
Sbjct: 1590 IRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLVDNLETP 1649

Query: 490  SARICLGLPVKMGTGCFDLMHN 425
            S+RICLGLPVKMGTG F LM N
Sbjct: 1650 SSRICLGLPVKMGTGSFGLMQN 1671


>XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
            hirsutum]
          Length = 1674

 Score = 1771 bits (4588), Expect = 0.0
 Identities = 959/1702 (56%), Positives = 1164/1702 (68%), Gaps = 51/1702 (2%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            F+F T EEVR HS  K+T+    D M+RP+PGGL+D  LGP++D  PCKSCG   L CPG
Sbjct: 17   FNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLEDRTPCKSCGLLKLHCPG 76

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVRDL 5018
            HCGHIDLV+P+YNPLLF  LHTLI++ CFFC+HFR  R +V+   SQL LI KGD V   
Sbjct: 77   HCGHIDLVSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKCISQLKLIGKGDIVGAK 136

Query: 5017 CEEDGVTDTS---------------VHTKERSSTSNWTSFQYHEVKSILNKFMGENFKKC 4883
              +    D+S               +H  E  +   WTS Q  E  S+LNKF+   +K+C
Sbjct: 137  RLDSDSKDSSSHPENSEGCQKLGSRLHESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRC 196

Query: 4882 QNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNAD 4703
            +NC A NP IT PTFGWF    M  +  R N+I+GCK+ +TF    E  S ++ DA +A 
Sbjct: 197  KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTF--SGEVGSDIE-DANDAS 253

Query: 4702 DTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVK 4523
             +  G +  ++   E+     DG    A  K K     +P EFLKQ+ L SGPLLPSEVK
Sbjct: 254  SSEEGVDITKTKTPEIGFKGADGTSAKACKKAK-----VPLEFLKQKNLFSGPLLPSEVK 308

Query: 4522 NLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEV 4343
             ++KLLWENE  LCSLI  IQQQ     G+    SMFF+E +LVPP KFR P++     +
Sbjct: 309  KVMKLLWENEIELCSLINCIQQQGF---GEKVGYSMFFLETVLVPPIKFRAPTKGGDSVM 365

Query: 4342 EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRGT 4166
            EHPQ+VLLS V+Q N+SLG A+ N+ +  K++ R WM+LQQ+IN+LFDS+ A+ Q+   +
Sbjct: 366  EHPQTVLLSKVLQANISLGNAHNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVS 425

Query: 4165 SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTP 3986
             GICQL+E+KEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVTP
Sbjct: 426  PGICQLLERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 485

Query: 3985 WNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSL 3806
            WNV KLR A++NG+E+HPGATHY DK S  RLP                R A+T PGK+ 
Sbjct: 486  WNVVKLREAIINGSELHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRAAITQPGKNF 545

Query: 3805 DSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADF 3626
            D EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNADF
Sbjct: 546  DYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADF 605

Query: 3625 DGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLT 3446
            DGDE+NVHFPQDEISRAEA  I NAN QY+ P++G P+R LIQDHIVSAVLLTK+DTFL+
Sbjct: 606  DGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLS 665

Query: 3445 RDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITT 3266
            RDE++ LLY+SGVS  A    +GK GQKV   SS++ + P+ P I KPKPLWTGKQVIT 
Sbjct: 666  RDEFNQLLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPILPAILKPKPLWTGKQVITA 725

Query: 3265 ILNHITRGRPPFTVKKEGKIEDGCFYSEWKE------GNMVEXXXXXXXXXXXXXKLIIW 3104
            +LNHITRGRPPFTV+K GK     F +   E      G   +             K++I+
Sbjct: 726  VLNHITRGRPPFTVEKTGKTPRDFFKNRSNENKLKSGGQEGKDAEENSNKEPDEEKILIY 785

Query: 3103 KNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLL 2924
            KN+LV GVIDK QFA YG+VHTVQE YGSNTAG LLSV SRLFTVFLQMHGFTCGVDDLL
Sbjct: 786  KNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRLFTVFLQMHGFTCGVDDLL 845

Query: 2923 IVQHSDLKRKMILEKHENTGANIHSKFIGAKI---AEPVKLQMEIERAIRSHGESAVTYL 2753
            I+   D++RK  LE+ E      H +F   K+     P++LQ++IE+ IR  GE+A+T L
Sbjct: 846  IMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIELQLKIEKTIRRDGEAALTAL 905

Query: 2752 DMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLL 2588
            D  M   LN     GV TE    ++  GL+KP  RNC+SLMTTTGAKGS+VNF QISS L
Sbjct: 906  DRTMISVLNKNSSQGVLTE----LLSEGLVKPMGRNCISLMTTTGAKGSKVNFQQISSFL 961

Query: 2587 GQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLV 2408
            GQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFLTGLRPQEYYFHCMAGREGLV
Sbjct: 962  GQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQEYYFHCMAGREGLV 1021

Query: 2407 DTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFK 2228
            DTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH+ SF+T+F+
Sbjct: 1022 DTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGEDGIDVHQTSFVTKFE 1081

Query: 2227 LLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQK 2057
             LA N  ++ EKLS   G+  D+       LPD LR KA  FI    ++K       K K
Sbjct: 1082 ALALNCDVMSEKLSSMLGEPYDSGKI----LPDDLRDKAVQFIKDNRQQK------IKTK 1131

Query: 2056 NLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQE 1877
            N + L+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQE
Sbjct: 1132 NFLKLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1191

Query: 1876 ILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGA 1697
            IL  AS  I+TP+MTCPL KG T+ +A RLA K+K ++VA+I+ESM V V PF++H G  
Sbjct: 1192 ILMTASIDIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESMGVSVTPFAIHNGDI 1251

Query: 1696 STIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVT 1517
             +IYKLKM+L  P  Y   SDIT+ DC+  LEV F+RELED+IQ+H+ +LS+I GIK   
Sbjct: 1252 CSIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFM 1311

Query: 1516 NSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
                 N + ET E+ P S SH+                      DAQK+K QA DEMDY+
Sbjct: 1312 PDSRPNASSETDEDVPESRSHET----ENDDDTDDEGRAEDLGLDAQKQKQQATDEMDYE 1367

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDG----DYTLGGESEIMEGEDQIFDAED 1169
            DG        E+E  E     G E E D  ED+     +  +G ++E    +D IF    
Sbjct: 1368 DGS-------EEEQNEGASLAGLECENDMSEDENGTIENNVIGSDNE----KDDIFH--- 1413

Query: 1168 EAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFR 989
               GSP+  D  SKLK      + + K++K RG  I+K+TDRAI    KGL FE HF F 
Sbjct: 1414 ---GSPNAEDG-SKLKSREGNTRAEPKRKKMRGKFIRKETDRAISSATKGLVFEVHFKFV 1469

Query: 988  DEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKKGEV------TPS 851
            +EPH            KVY++    ID+C         V  Y ED K+ +        P+
Sbjct: 1470 NEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSGKANIPA 1529

Query: 850  LQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVD 671
            L TAGV+F AFW ++ +LD+R + SN+I+AMLNTYGVEAAR TI+ E+ NVF  Y I V+
Sbjct: 1530 LHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTSYGIGVN 1589

Query: 670  IRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESP 491
            IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIV+AA HG V+ LE+P
Sbjct: 1590 IRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLVDNLETP 1649

Query: 490  SARICLGLPVKMGTGCFDLMHN 425
            S+RICLGLPVKMGTG F LM N
Sbjct: 1650 SSRICLGLPVKMGTGSFGLMQN 1671


>XP_007028854.2 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2
            [Theobroma cacao]
          Length = 1689

 Score = 1769 bits (4581), Expect = 0.0
 Identities = 952/1704 (55%), Positives = 1152/1704 (67%), Gaps = 54/1704 (3%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF+F T EEVR HSF K+T+    D M RP+PGGL+D  LGP++D  PCKSCG   L CP
Sbjct: 16   RFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLEDRTPCKSCGLLKLHCP 75

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+P+YNPLLF  LHTL+++ CFFC+HFR  + +V+   SQL LI  GD V  
Sbjct: 76   GHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGA 135

Query: 5026 -------------RDLCEEDGVTDTSVHTKERSSTSNWTSFQYHEVKSILNKFMGENFKK 4886
                          D  E    + + VH  E      WTS Q  E  S+LN F+   + K
Sbjct: 136  KRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNK 195

Query: 4885 CQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNA 4706
            C+NC A NP IT P FGW  M+ ML A  R N+I+GCK+ +TF   A          ++A
Sbjct: 196  CKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDDA------GSGLEDA 249

Query: 4705 DDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEV 4526
            DD    GN V+  + + S     G  GN + K + K   +P EF+KQ+ L SGPLLPSEV
Sbjct: 250  DDVSSSGNGVDIAEMDTSEIGFTGSEGNGA-KARKKKAQVPLEFMKQKNLFSGPLLPSEV 308

Query: 4525 KNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGME 4346
            K + KLLWENE  LCS+I DIQQQ     GK    SMFF+E +LVPP KFR P++     
Sbjct: 309  KKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSV 365

Query: 4345 VEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRG 4169
            +EHPQ+VLLS V+Q N+SLG AY NN +  K V R WM+LQQ++N+LFDS+ A+ Q    
Sbjct: 366  MEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDV 425

Query: 4168 TSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVT 3989
            +SGICQL+EKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVT
Sbjct: 426  SSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 485

Query: 3988 PWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKS 3809
            PWNV KLR A++NG+E HPGATHY DK S  RLP                RGA+  PGK+
Sbjct: 486  PWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKN 545

Query: 3808 LDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNAD 3629
            LD EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNAD
Sbjct: 546  LDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNAD 605

Query: 3628 FDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFL 3449
            FDGDE+NVHFPQDEISRAEA  I NAN QY+ P++G PIR LIQDHIVSAVLLTK+DTFL
Sbjct: 606  FDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFL 665

Query: 3448 TRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVIT 3269
            +RDE++ LLY+SGVS+ A  S+ GK GQKV   +S++ + P+ P I KPKPLWTGKQVI+
Sbjct: 666  SRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVIS 725

Query: 3268 TILNHITRGRPPFTVKKEGKIEDGCFYSE--------------WKEGNMVEXXXXXXXXX 3131
            ++L+HITRGRPPFTV K  KI    F +                 +G   +         
Sbjct: 726  SVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQPKNDGQKAKVAEKNSKKE 785

Query: 3130 XXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHG 2951
                K++I++N+LV GVIDK QFA YG+VHTVQE YGSNTAGILLSV SRLFTVFLQMHG
Sbjct: 786  PDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGILLSVFSRLFTVFLQMHG 845

Query: 2950 FTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIAEPVKLQMEIERAIRSHGE 2771
            FTCGVDDLLI++  D++RK  LE  E      H +  G K+    +LQ+EIER IR  GE
Sbjct: 846  FTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSETELQLEIERTIRRDGE 905

Query: 2770 SAVTYLDMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFT 2606
            +A+T LD  M   LN     GV TE    ++  GL+K    NC+SLMTT+GAKGS+VNF 
Sbjct: 906  TALTALDRKMISVLNENSSKGVLTE----LLSEGLVKSMGENCISLMTTSGAKGSKVNFQ 961

Query: 2605 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMA 2426
            QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFL+GLRPQEYYFHCMA
Sbjct: 962  QISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMA 1021

Query: 2425 GREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKAS 2246
            GREGLVDTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH+ S
Sbjct: 1022 GREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTS 1081

Query: 2245 FITEFKLLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSL 2075
            FI +F+ LA NQ ++ EKL    G+ +D+       LPD LR KA+ FI    KK +   
Sbjct: 1082 FIAKFEALALNQDMMSEKLCSQLGEPDDSDKI----LPDGLRSKAEQFIREEIKKYQ--- 1134

Query: 2074 HLR-KQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTL 1898
            H + K K+ +NL+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTL
Sbjct: 1135 HQKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTL 1194

Query: 1897 GIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPF 1718
            GIPRLQEIL  AS  IRTP+MTCPL KG T+ +A  LA K+K ++VADI+ESMEV V PF
Sbjct: 1195 GIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPF 1254

Query: 1717 SVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKI 1538
            +V  G   +IYKLKM L  P+ Y   SDIT++DCE  L+V F+RELED+IQ+H+ +LSKI
Sbjct: 1255 AVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKI 1314

Query: 1537 RGIKAVTNSEEHNTTKETSEE-EPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQ 1361
             GIK      + N + E  E+   G                           DAQK+K Q
Sbjct: 1315 SGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQ 1374

Query: 1360 AKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIF 1181
              DEMDY+D  E        E  E       ESEID  ED+     G     M G D   
Sbjct: 1375 TTDEMDYEDDSEV-------EQNEGASLAALESEIDMSEDE----TGTIQINMIGSD--- 1420

Query: 1180 DAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAH 1001
            + +DE   S    +  S  K    +   + K++K +   ++K++DRAI   I+GL FE H
Sbjct: 1421 NGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVH 1480

Query: 1000 FCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK------GE 863
            F  ++EPH            KVY++    ID+C         V  Y ED KK       E
Sbjct: 1481 FKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKE 1540

Query: 862  VTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYA 683
              P+L T GV+F AFW ++D++D+R + SN I+AMLNTYGVEAAR TI++E+ +VF  Y 
Sbjct: 1541 KIPALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYG 1600

Query: 682  ISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVER 503
            I+V+IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIVEAA HG V+ 
Sbjct: 1601 IAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDN 1660

Query: 502  LESPSARICLGLPVKMGTGCFDLM 431
            LE+PS+RICLGLPVKMGTG FDLM
Sbjct: 1661 LETPSSRICLGLPVKMGTGSFDLM 1684


>XP_017977139.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
            [Theobroma cacao]
          Length = 1692

 Score = 1767 bits (4576), Expect = 0.0
 Identities = 953/1707 (55%), Positives = 1153/1707 (67%), Gaps = 57/1707 (3%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF+F T EEVR HSF K+T+    D M RP+PGGL+D  LGP++D  PCKSCG   L CP
Sbjct: 16   RFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLEDRTPCKSCGLLKLHCP 75

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+P+YNPLLF  LHTL+++ CFFC+HFR  + +V+   SQL LI  GD V  
Sbjct: 76   GHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGA 135

Query: 5026 -------------RDLCEEDGVTDTSVHTKERSSTSNWTSFQYHEVKSILNKFMGENFKK 4886
                          D  E    + + VH  E      WTS Q  E  S+LN F+   + K
Sbjct: 136  KRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNK 195

Query: 4885 CQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNA 4706
            C+NC A NP IT P FGW  M+ ML A  R N+I+GCK+ +TF   A          ++A
Sbjct: 196  CKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDDA------GSGLEDA 249

Query: 4705 DDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEV 4526
            DD    GN V+  + + S     G  GN + K + K   +P EF+KQ+ L SGPLLPSEV
Sbjct: 250  DDVSSSGNGVDIAEMDTSEIGFTGSEGNGA-KARKKKAQVPLEFMKQKNLFSGPLLPSEV 308

Query: 4525 KNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGME 4346
            K + KLLWENE  LCS+I DIQQQ     GK    SMFF+E +LVPP KFR P++     
Sbjct: 309  KKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSV 365

Query: 4345 VEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRG 4169
            +EHPQ+VLLS V+Q N+SLG AY NN +  K V R WM+LQQ++N+LFDS+ A+ Q    
Sbjct: 366  MEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDV 425

Query: 4168 TSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVT 3989
            +SGICQL+EKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVT
Sbjct: 426  SSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 485

Query: 3988 PWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKS 3809
            PWNV KLR A++NG+E HPGATHY DK S  RLP                RGA+  PGK+
Sbjct: 486  PWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKN 545

Query: 3808 LDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNAD 3629
            LD EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNAD
Sbjct: 546  LDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNAD 605

Query: 3628 FDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFL 3449
            FDGDE+NVHFPQDEISRAEA  I NAN QY+ P++G PIR LIQDHIVSAVLLTK+DTFL
Sbjct: 606  FDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFL 665

Query: 3448 TRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVIT 3269
            +RDE++ LLY+SGVS+ A  S+ GK GQKV   +S++ + P+ P I KPKPLWTGKQVI+
Sbjct: 666  SRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVIS 725

Query: 3268 TILNHITRGRPPFTVKKEGKIEDGCFYSE--------------WKEGNMVEXXXXXXXXX 3131
            ++L+HITRGRPPFTV K  KI    F +                 +G   +         
Sbjct: 726  SVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQPKNDGQKAKVAEKNSKKE 785

Query: 3130 XXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHG 2951
                K++I++N+LV GVIDK QFA YG+VHTVQE YGSNTAGILLSV SRLFTVFLQMHG
Sbjct: 786  PDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGILLSVFSRLFTVFLQMHG 845

Query: 2950 FTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKI---AEPVKLQMEIERAIRS 2780
            FTCGVDDLLI++  D++RK  LE  E      H +  G K+     P +LQ+EIER IR 
Sbjct: 846  FTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSETAPTELQLEIERTIRR 905

Query: 2779 HGESAVTYLDMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQV 2615
             GE+A+T LD  M   LN     GV TE    ++  GL+K    NC+SLMTT+GAKGS+V
Sbjct: 906  DGETALTALDRKMISVLNENSSKGVLTE----LLSEGLVKSMGENCISLMTTSGAKGSKV 961

Query: 2614 NFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFH 2435
            NF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFL+GLRPQEYYFH
Sbjct: 962  NFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFH 1021

Query: 2434 CMAGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVH 2255
            CMAGREGLVDTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH
Sbjct: 1022 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVH 1081

Query: 2254 KASFITEFKLLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKR 2084
            + SFI +F+ LA NQ ++ EKL    G+ +D+       LPD LR KA+ FI    KK +
Sbjct: 1082 QTSFIAKFEALALNQDMMSEKLCSQLGEPDDSDKI----LPDGLRSKAEQFIREEIKKYQ 1137

Query: 2083 DSLHLR-KQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMN 1907
               H + K K+ +NL+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMN
Sbjct: 1138 ---HQKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMN 1194

Query: 1906 VTLGIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCV 1727
            VTLGIPRLQEIL  AS  IRTP+MTCPL KG T+ +A  LA K+K ++VADI+ESMEV V
Sbjct: 1195 VTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSV 1254

Query: 1726 VPFSVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKML 1547
             PF+V  G   +IYKLKM L  P+ Y   SDIT++DCE  L+V F+RELED+IQ+H+ +L
Sbjct: 1255 APFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLL 1314

Query: 1546 SKIRGIKAVTNSEEHNTTKETSEE-EPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKR 1370
            SKI GIK      + N + E  E+   G                           DAQK+
Sbjct: 1315 SKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQ 1374

Query: 1369 KWQAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGED 1190
            K Q  DEMDY+D  E        E  E       ESEID  ED+     G     M G D
Sbjct: 1375 KQQTTDEMDYEDDSEV-------EQNEGASLAALESEIDMSEDE----TGTIQINMIGSD 1423

Query: 1189 QIFDAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKF 1010
               + +DE   S    +  S  K    +   + K++K +   ++K++DRAI   I+GL F
Sbjct: 1424 ---NGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCF 1480

Query: 1009 EAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK----- 869
            E HF  ++EPH            KVY++    ID+C         V  Y ED KK     
Sbjct: 1481 EVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPS 1540

Query: 868  -GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFK 692
              E  P+L T GV+F AFW ++D++D+R + SN I+AMLNTYGVEAAR TI++E+ +VF 
Sbjct: 1541 DKEKIPALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFT 1600

Query: 691  PYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGE 512
             Y I+V+IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIVEAA HG 
Sbjct: 1601 SYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGL 1660

Query: 511  VERLESPSARICLGLPVKMGTGCFDLM 431
            V+ LE+PS+RICLGLPVKMGTG FDLM
Sbjct: 1661 VDNLETPSSRICLGLPVKMGTGSFDLM 1687


>XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
            hirsutum]
          Length = 1674

 Score = 1766 bits (4575), Expect = 0.0
 Identities = 957/1700 (56%), Positives = 1163/1700 (68%), Gaps = 51/1700 (3%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            F+F T EEVR HS  K+T+    D M+RP+PGGL+D  LGP++D  PCKSCG   L CPG
Sbjct: 17   FNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLEDRTPCKSCGLLKLHCPG 76

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVRDL 5018
            HCGHIDLV+P+YNPLLF  LHTL+++ CFFC+HFR  R +V+   SQL LI KGD V   
Sbjct: 77   HCGHIDLVSPIYNPLLFNFLHTLVQRTCFFCYHFRAERTEVERCISQLKLIGKGDIVGAK 136

Query: 5017 CEEDGVTDTS---------------VHTKERSSTSNWTSFQYHEVKSILNKFMGENFKKC 4883
              +    D+S               +H  E  +   WTS Q  E  S+LNKF+   +K+C
Sbjct: 137  RLDTDSKDSSSHPENSEGCQKLGSRLHESEAVNPKEWTSLQLTEAISVLNKFLKVKYKRC 196

Query: 4882 QNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNAD 4703
            +NC A NP IT PTFGWF    M  +  R N+I+GCK+ +TF    E  S ++ DA +A 
Sbjct: 197  KNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTF--SGEVGSDIE-DANDAS 253

Query: 4702 DTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVK 4523
             +  G +  ++   E+     DG    A  K K     +P EFLKQ+ L SGPLLPSEVK
Sbjct: 254  SSEEGVDIKKTKTPEIGFKGADGTSAKARKKAK-----VPLEFLKQKNLFSGPLLPSEVK 308

Query: 4522 NLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEV 4343
             ++KLLWENE  LCSLI  IQQQ L   G+    SMFF+E +LVPP KFR P++     +
Sbjct: 309  KVMKLLWENEIELCSLINCIQQQGL---GEKVGFSMFFLETVLVPPIKFRAPTKGGDSVM 365

Query: 4342 EHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRGT 4166
            EHPQ+VLLS V+  N+SLG AY N+ +  K++ R WM+LQQ+IN+LFDS+ A+ Q+   +
Sbjct: 366  EHPQTVLLSKVLLANISLGNAYNNDLQSSKVIVRLWMDLQQSINLLFDSKTAMSQRRDVS 425

Query: 4165 SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTP 3986
             GICQL+E+KEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVTP
Sbjct: 426  PGICQLLERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTP 485

Query: 3985 WNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSL 3806
            WNV KLR A++NG+EIHPGATHY DK S  RLP                RGA+T PGK+ 
Sbjct: 486  WNVVKLREAIINGSEIHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRGAITQPGKNF 545

Query: 3805 DSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADF 3626
            D EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNADF
Sbjct: 546  DYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADF 605

Query: 3625 DGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLT 3446
            DGDE+NVHFPQDEISRAEA  I NAN QY+ P++G P+R LIQDHIVSAVLLTK+DTFL+
Sbjct: 606  DGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLS 665

Query: 3445 RDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITT 3266
            RDE++ LLY+SGVS  A    +GK GQKV   +S++ + P+ P I KPK LWTGKQVIT 
Sbjct: 666  RDEFNQLLYSSGVSGLAQHPRLGKSGQKVLISNSEEGMLPILPAILKPKTLWTGKQVITA 725

Query: 3265 ILNHITRGRPPFTVKKEGKIEDGCFYSEWKE------GNMVEXXXXXXXXXXXXXKLIIW 3104
            +LNHITRGRPPFTV+K GK     F +   E      G   +             K++I+
Sbjct: 726  VLNHITRGRPPFTVEKTGKTPRDFFKNRSNENKPKSGGQEGKDAGKNSNKEPDEEKILIY 785

Query: 3103 KNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLL 2924
            KN+LV GVIDK QFA YG+VHTVQE YGSNTAG LLSV SRLFTVFLQMHGFTCGVDDLL
Sbjct: 786  KNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRLFTVFLQMHGFTCGVDDLL 845

Query: 2923 IVQHSDLKRKMILEKHENTGANIHSKFIGAKI---AEPVKLQMEIERAIRSHGESAVTYL 2753
            I+   D++RK  LE+ E      H +F   K+     P++LQ++IE+ IR  GE+A+T L
Sbjct: 846  IMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDAEIAPIELQLKIEKTIRRDGEAALTAL 905

Query: 2752 DMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLL 2588
            D  M   LN     GV TE    ++  GL+KP  RNC+SLMTTTGAKGS+VNF QISS L
Sbjct: 906  DRTMISVLNKNSSQGVLTE----LLSEGLVKPMGRNCISLMTTTGAKGSKVNFQQISSFL 961

Query: 2587 GQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLV 2408
            GQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFLTGLRPQEYYFHCMAGREGLV
Sbjct: 962  GQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQEYYFHCMAGREGLV 1021

Query: 2407 DTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFK 2228
            DTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH+ SF+T+F+
Sbjct: 1022 DTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGEDGIDVHQTSFVTKFE 1081

Query: 2227 LLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLRKQK 2057
             LA N+ ++ EKLS   G+  D+       LPD LR K   FI    ++K       + K
Sbjct: 1082 ALALNRDVMSEKLSSMLGEPYDSGKI----LPDGLRDKVVQFIKDNRQQK------IRTK 1131

Query: 2056 NLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQE 1877
            N + L+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTLGIPRLQE
Sbjct: 1132 NFLKLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQE 1191

Query: 1876 ILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGA 1697
            IL  AS  I+TP+MTCPL KG T+ +A RLA K+K ++VA+I+ESM V V PF+V+ G  
Sbjct: 1192 ILMTASIDIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESMGVSVTPFAVYNGDI 1251

Query: 1696 STIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVT 1517
             +IYKLKM+L  P  Y   SDIT+ DC+  LEV F+RELED+IQ+H+ +LS+I GIK   
Sbjct: 1252 CSIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFM 1311

Query: 1516 NSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYD 1337
                 N + ET E+ P S SH+                      DAQK+K QA DEMDY+
Sbjct: 1312 PDSRPNASSETDEDVPESRSHET----ENDDDTDDEGRAEDLGLDAQKQKQQATDEMDYE 1367

Query: 1336 DGMESKVPIVEDELKESEQSTGFESEIDQVEDDG----DYTLGGESEIMEGEDQIFDAED 1169
            DG        E+E  E     G ESE D  ED+     +  +G ++E    +D IF    
Sbjct: 1368 DGS-------EEEQNEGASLAGLESENDMSEDENGTIENNVIGSDNE----KDDIFH--- 1413

Query: 1168 EAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFR 989
               GSP+  D  SKLK      + + K++K RG  I+K+TDRAI    KGL FE HF F 
Sbjct: 1414 ---GSPNAEDG-SKLKSREGNTRTEPKRKKMRGKFIRKETDRAIFSATKGLVFEVHFKFV 1469

Query: 988  DEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKKGEV------TPS 851
            +EPH            KVY++    ID+C         V  Y ED K+ +        P 
Sbjct: 1470 NEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSGKANRPG 1529

Query: 850  LQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVD 671
            L TAGV+F AFW ++ +LD+R + SN+I+AMLNTYGVEAAR TI+ E+ NVF  Y I V+
Sbjct: 1530 LHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTSYGIGVN 1589

Query: 670  IRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESP 491
            IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIV+AA HG V+ LE+P
Sbjct: 1590 IRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLVDNLETP 1649

Query: 490  SARICLGLPVKMGTGCFDLM 431
            S+RICLGLPVKMGTG F LM
Sbjct: 1650 SSRICLGLPVKMGTGSFGLM 1669


>EOY09356.1 Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1765 bits (4572), Expect = 0.0
 Identities = 951/1704 (55%), Positives = 1151/1704 (67%), Gaps = 54/1704 (3%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF+F T EEVR HSF K+T+    D M RP+PGGL+D  LGP++D  PCKSCG   L CP
Sbjct: 16   RFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLEDRTPCKSCGLLKLHCP 75

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+P+YNPLLF  LHTL+++ CFFC+HFR  + +V+   SQL LI  GD V  
Sbjct: 76   GHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGA 135

Query: 5026 -------------RDLCEEDGVTDTSVHTKERSSTSNWTSFQYHEVKSILNKFMGENFKK 4886
                          D  E    + + VH  E      WTS Q  E  S+LN F+   + K
Sbjct: 136  KRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNK 195

Query: 4885 CQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNA 4706
            C+NC A NP IT P FGW  M+ ML A  R N+I+GCK+ +TF   A          ++A
Sbjct: 196  CKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDEA------GSGLEDA 249

Query: 4705 DDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEV 4526
            DD    GN V+  + + S     G  GN + K + K   +P EF+KQ+ L SGPLLPSEV
Sbjct: 250  DDVSSSGNGVDIAEMDTSEIGFTGSEGNGA-KARKKKAQVPLEFMKQKNLFSGPLLPSEV 308

Query: 4525 KNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGME 4346
            K + KLLWENE  LCS+I DIQQQ     GK    SMFF+E +LVPP KFR P++     
Sbjct: 309  KKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSV 365

Query: 4345 VEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNR-WMNLQQTINVLFDSRKAIRQKDRG 4169
            +EHPQ+VLLS V+Q N+SLG AY NN +  K V R WM+LQQ++N+LFDS+ A+ Q    
Sbjct: 366  MEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDV 425

Query: 4168 TSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVT 3989
            +SGICQL+EKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++LTYPERVT
Sbjct: 426  SSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVT 485

Query: 3988 PWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKS 3809
            PWNV KLR A++NG+E HPGATHY DK S  RLP                RGA+  PGK+
Sbjct: 486  PWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKN 545

Query: 3808 LDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNAD 3629
            LD EFEGK+V RH+QDGD+VLVNRQPTLHKPS+MAHVVRVLKGEKT+RMHYANCSTYNAD
Sbjct: 546  LDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNAD 605

Query: 3628 FDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFL 3449
            FDGDE+NVHFPQDEISRAEA  I NAN QY+ P++G PIR LIQDHIVSAVLLTK+DTFL
Sbjct: 606  FDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFL 665

Query: 3448 TRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVIT 3269
            +RDE++ LLY+SGVS+ A  S+ GK GQKV   +S++ + P+ P I KPKPLWTGKQVI+
Sbjct: 666  SRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVIS 725

Query: 3268 TILNHITRGRPPFTVKKEGKIEDGCFYSE--------------WKEGNMVEXXXXXXXXX 3131
            ++L+HITRGRPPFTV K  KI    F +                 +G   +         
Sbjct: 726  SVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQPKNDGQKAKVAEKNSKKE 785

Query: 3130 XXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHG 2951
                K++I++N+LV GVIDK QFA YG+VHTVQE YGSNTAGILLSV SRLFTVFLQMHG
Sbjct: 786  PDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGILLSVFSRLFTVFLQMHG 845

Query: 2950 FTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIAEPVKLQMEIERAIRSHGE 2771
            FTCGVDDLLI++  D++RK  LE  E      H +  G K+    +LQ+EIER IR  GE
Sbjct: 846  FTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSETELQLEIERTIRRDGE 905

Query: 2770 SAVTYLDMLMSHELN-----GVTTEVNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFT 2606
            +A+T LD  M   LN     GV TE    ++  GL+K    NC+SLMTT+GAKGS+VNF 
Sbjct: 906  TALTALDRKMISVLNENSSKGVLTE----LLSEGLVKSMGENCISLMTTSGAKGSKVNFQ 961

Query: 2605 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMA 2426
            QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD AARAGGFI DRFL+GLRPQEYYFHCMA
Sbjct: 962  QISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMA 1021

Query: 2425 GREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKAS 2246
            GREGLVDTA+KTSRSGYLQRCLIKNLECL++ YDHTVRDADGS+VQF YGEDG+DVH+ S
Sbjct: 1022 GREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTS 1081

Query: 2245 FITEFKLLAQNQRIILEKLS---GQHEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSL 2075
            FI +F+ LA NQ ++ EKL    G+ +D+       LPD LR KA+ FI    KK +   
Sbjct: 1082 FIAKFEALALNQDMMSEKLCSQLGEPDDSDKI----LPDGLRSKAEQFIREEIKKYQ--- 1134

Query: 2074 HLR-KQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTL 1898
            H + K K+ +NL+K K+LSSLAQPGE VGVLAAQSVGEPSTQMTLNTFH AG+GEMNVTL
Sbjct: 1135 HQKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTL 1194

Query: 1897 GIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPF 1718
            GIPRLQEIL  AS  IRTP+MTCPL KG T+ +A  LA K+K ++VADI+ESMEV V PF
Sbjct: 1195 GIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPF 1254

Query: 1717 SVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKI 1538
            +V  G   +IYKLKM L  P+ Y   SDIT++DCE  L+V F+RELED+IQ+H+ +LSKI
Sbjct: 1255 AVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKI 1314

Query: 1537 RGIKAVTNSEEHNTTKETSEE-EPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQ 1361
             GIK      + N + E  E+   G                           DAQK+K Q
Sbjct: 1315 SGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQ 1374

Query: 1360 AKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIF 1181
              DEMDY+D  E        E  E       ESEID  ED+     G     M G D   
Sbjct: 1375 TTDEMDYEDDSEV-------EQNEGASLAALESEIDMSEDE----TGTIQINMIGSD--- 1420

Query: 1180 DAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAH 1001
            + +DE   S    +  S  K    +   + K++K +   ++K++DRAI   I+GL FE H
Sbjct: 1421 NGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVH 1480

Query: 1000 FCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK------GE 863
            F  ++EPH            KVY++    ID+C         V  Y ED KK       E
Sbjct: 1481 FKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKE 1540

Query: 862  VTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYA 683
               +L T GV+F AFW ++D++D+R + SN I+AMLNTYGVEAAR TI++E+ +VF  Y 
Sbjct: 1541 KIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYG 1600

Query: 682  ISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVER 503
            I+V+IRHLTLIAD+MT  G YRPM+R G      SP  KMSFETA+KFIVEAA HG V+ 
Sbjct: 1601 IAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDN 1660

Query: 502  LESPSARICLGLPVKMGTGCFDLM 431
            LE+PS+RICLGLPVKMGTG FDLM
Sbjct: 1661 LETPSSRICLGLPVKMGTGSFDLM 1684


>XP_010036456.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score = 1714 bits (4439), Expect = 0.0
 Identities = 931/1712 (54%), Positives = 1148/1712 (67%), Gaps = 62/1712 (3%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF F TDEEVR  S  K+T+ V  D++ RPV GGL+D A+G ++D   CKSCGQ +  CP
Sbjct: 15   RFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTACKSCGQRSFNCP 74

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGD---- 5033
            GHCGHIDLV+PVYNPLLF  L+ L+++ CFFC HFR  R +V A  S+L+LI KGD    
Sbjct: 75   GHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSKLELIAKGDVAGA 134

Query: 5032 -----------TVRDLCEEDGVT----------DTSVHTKERSSTSNWTSFQYHEVKSIL 4916
                       ++R+      V+          D+ VH K+      WTS Q++E  S+L
Sbjct: 135  KELDSKWATNSSLREASNGGDVSCSTVRSDLQHDSPVHQKQ----GEWTSLQFNEAMSVL 190

Query: 4915 NKFMGENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPR 4736
            NKF+   +K+C+NC A NPKI+ PTFGWF M  M  A TR NII+G K+D  F+ G    
Sbjct: 191  NKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRGNKMDGPFLDG---- 246

Query: 4735 SFMDGDAQNADDTML---GGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQ 4565
               DG+ ++ +   L   GGN  E+  +    A  DG+      + K KG  L  E++KQ
Sbjct: 247  ---DGEMESLEGAFLQDDGGNEAETQSSTF--ASPDGIGIAKKGQKKRKGHSLSDEYIKQ 301

Query: 4564 RKLLSGPLLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPP 4385
            +   SGPLLPSEVK ++KLLWENEA LCS I DIQQQ    +G S + SMFF+  +LVPP
Sbjct: 302  KNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFLGTVLVPP 358

Query: 4384 NKFRPPSRKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLF 4205
             KFRPPS+     +EHP +VLL+ V+Q N+SLG A+ +N  R  I++RWM+LQQ+IN+LF
Sbjct: 359  IKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQQSINLLF 416

Query: 4204 DSRKAIRQKDRGT-SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 4028
            DS+ A  Q  R   SGICQL+EKKEG+FRQ MMGKRVN+ACRSVISPDPYLAVNEIGIPP
Sbjct: 417  DSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEIGIPP 476

Query: 4027 YFAVKLTYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXX 3848
            YFA++LTYPERVTPWN   LR A++NG + HPGATHY DK S ++LP             
Sbjct: 477  YFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISRRL 536

Query: 3847 XXXRGAVTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTL 3668
               RG VT  G+S D+E EGK+VYRH++DGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTL
Sbjct: 537  PSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTL 596

Query: 3667 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHI 3488
            RMHYANCSTYNADFDGDEMNVHFPQD+ISRAEA  I NAN QY+ PT+G+PIR LIQDHI
Sbjct: 597  RMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQDHI 656

Query: 3487 VSAVLLTKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIW 3308
            VSA +LTKKDTFL  DE++ LLY+SGVS A SGS+  K G+KV     D+ + P+P  IW
Sbjct: 657  VSAAILTKKDTFLNYDEFNHLLYSSGVSAAGSGSF-RKLGKKVAINFEDNLLSPVP-AIW 714

Query: 3307 KPKPLWTGKQVITTILNHITRGRPPFTVKKEGKIEDGCF-----YSEWKEGNMVEXXXXX 3143
            KP+PLWTGKQ+I  +L+H+TRG PPFTV+K+GKI    F     +   K     +     
Sbjct: 715  KPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNKDKERE 774

Query: 3142 XXXXXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFL 2963
                     ++I+KN L+ GVIDK QF  YG+VHT QE YGSN AGILLS  SRLFT FL
Sbjct: 775  RNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRLFTAFL 834

Query: 2962 QMHGFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAK-IAEPVKLQMEIERAI 2786
            Q+HGFTCGVDDLL+ +  D KR+  LE+ EN G  +H + +G     +P +LQ++IE  I
Sbjct: 835  QLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVGVNDFIDPAELQLKIEEVI 894

Query: 2785 RSHGESAVTYLDMLMSHELNGVTTE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNF 2609
            RS+G+SA+T LD  M   LN ++++ +   ++  GL KP  +NC+SLMTT+GAKG   NF
Sbjct: 895  RSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAKGGTANF 954

Query: 2608 TQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCM 2429
             QISS LGQQ+LEG+RVPRMVSGKTLPCFPPWD A+RAGGFI DRFLTGLRPQEYYFHCM
Sbjct: 955  QQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQEYYFHCM 1014

Query: 2428 AGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKA 2249
            AGREGLVDTA+KTSRSGYLQRCL+KNLECL+V YDHTVRDADGS+VQF YGEDG+DVHK 
Sbjct: 1015 AGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDGIDVHKT 1074

Query: 2248 SFITEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFI--GTLSKKKRDSL 2075
            SF+ +F  L  N  I+  K S +    SN Y+ +LP+AL+ KA  FI    LS  +    
Sbjct: 1075 SFVAKFDALLANHDIMKAKYSTELR-KSNSYITDLPEALKDKANKFICDRNLSVPRLARN 1133

Query: 2074 HLRKQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLG 1895
             + K ++ +  V+ KY SSLAQPGE VG++AAQSVGEPSTQMTLNTFHHAG+GEMNVTLG
Sbjct: 1134 EILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLG 1193

Query: 1894 IPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFS 1715
            IPRLQEIL  AS  I+TPIMTCPL +G ++ +A  LA KLK ++VA+++ESMEV VVPF+
Sbjct: 1194 IPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIESMEVAVVPFA 1253

Query: 1714 VHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIR 1535
            V+     +IYKLKMKL  P+++      +++ CEE LEV ++RELED+IQ+H+ +LSKI 
Sbjct: 1254 VNNHQVCSIYKLKMKLKRPKVF------SVKHCEEILEVVYLRELEDAIQNHLLLLSKIS 1307

Query: 1534 GIKAVTNSEEHNTTKETSEEEPGSISHQV---XXXXXXXXXXXXXXXXXXXXXDAQKRKW 1364
            GIK  T+S       ET E+  GS S                           D QKRK 
Sbjct: 1308 GIKNFTSS-------ETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLGFDGQKRKR 1360

Query: 1363 QAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVED-----DGDYTLGGESEIME 1199
            QA DEM+Y+DG        E+E  E E S G ES+ DQ  D     DGD   G   EI+ 
Sbjct: 1361 QATDEMEYEDG-------YEEERNEPELSAGLESDGDQANDVDIGEDGDGPPGIAPEIV- 1412

Query: 1198 GEDQIFDAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKG 1019
                          SPSK     K  +S+ E K + + +      + K+ DRAI V   G
Sbjct: 1413 --------------SPSKTKKSKKNAKSDDEGKKRVRTK------VIKEFDRAIFVAANG 1452

Query: 1018 LKFEAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIG--------YEEDNKK-- 869
            L FE HF F +EPH            KVY++ S  I+ C VI         Y ED K+  
Sbjct: 1453 LDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQ 1512

Query: 868  ------GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEV 707
                   E  P++ T G +F A W +QD LDIR I SNDI+AML TYGVEAAR TI++EV
Sbjct: 1513 KIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREV 1572

Query: 706  YNVFKPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEA 527
             NVF  Y ISVD+RHLTLIAD+MT  GGYRPMNR G      SP  KMSFETA+KFIV+A
Sbjct: 1573 QNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDA 1632

Query: 526  ALHGEVERLESPSARICLGLPVKMGTGCFDLM 431
            A HG V+ LE+PSARICLGLP+KMGTG FDL+
Sbjct: 1633 AYHGVVDNLETPSARICLGLPMKMGTGSFDLL 1664


>XP_010036455.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score = 1714 bits (4439), Expect = 0.0
 Identities = 931/1712 (54%), Positives = 1148/1712 (67%), Gaps = 62/1712 (3%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            RF F TDEEVR  S  K+T+ V  D++ RPV GGL+D A+G ++D   CKSCGQ +  CP
Sbjct: 15   RFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTACKSCGQRSFNCP 74

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGD---- 5033
            GHCGHIDLV+PVYNPLLF  L+ L+++ CFFC HFR  R +V A  S+L+LI KGD    
Sbjct: 75   GHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSKLELIAKGDVAGA 134

Query: 5032 -----------TVRDLCEEDGVT----------DTSVHTKERSSTSNWTSFQYHEVKSIL 4916
                       ++R+      V+          D+ VH K+      WTS Q++E  S+L
Sbjct: 135  KELDSKWATNSSLREASNGGDVSCSTVRSDLQHDSPVHQKQ----GEWTSLQFNEAMSVL 190

Query: 4915 NKFMGENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPR 4736
            NKF+   +K+C+NC A NPKI+ PTFGWF M  M  A TR NII+G K+D  F+ G    
Sbjct: 191  NKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRGNKMDGPFLDG---- 246

Query: 4735 SFMDGDAQNADDTML---GGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQ 4565
               DG+ ++ +   L   GGN  E+  +    A  DG+      + K KG  L  E++KQ
Sbjct: 247  ---DGEMESLEGAFLQDDGGNEAETQSSTF--ASPDGIGIAKKGQKKRKGHSLSDEYIKQ 301

Query: 4564 RKLLSGPLLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPP 4385
            +   SGPLLPSEVK ++KLLWENEA LCS I DIQQQ    +G S + SMFF+  +LVPP
Sbjct: 302  KNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFLGTVLVPP 358

Query: 4384 NKFRPPSRKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLF 4205
             KFRPPS+     +EHP +VLL+ V+Q N+SLG A+ +N  R  I++RWM+LQQ+IN+LF
Sbjct: 359  IKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQQSINLLF 416

Query: 4204 DSRKAIRQKDRGT-SGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 4028
            DS+ A  Q  R   SGICQL+EKKEG+FRQ MMGKRVN+ACRSVISPDPYLAVNEIGIPP
Sbjct: 417  DSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEIGIPP 476

Query: 4027 YFAVKLTYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXX 3848
            YFA++LTYPERVTPWN   LR A++NG + HPGATHY DK S ++LP             
Sbjct: 477  YFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISRRL 536

Query: 3847 XXXRGAVTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTL 3668
               RG VT  G+S D+E EGK+VYRH++DGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTL
Sbjct: 537  PSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTL 596

Query: 3667 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHI 3488
            RMHYANCSTYNADFDGDEMNVHFPQD+ISRAEA  I NAN QY+ PT+G+PIR LIQDHI
Sbjct: 597  RMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQDHI 656

Query: 3487 VSAVLLTKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIW 3308
            VSA +LTKKDTFL  DE++ LLY+SGVS A SGS+  K G+KV     D+ + P+P  IW
Sbjct: 657  VSAAILTKKDTFLNYDEFNHLLYSSGVSAAGSGSF-RKLGKKVAINFEDNLLSPVP-AIW 714

Query: 3307 KPKPLWTGKQVITTILNHITRGRPPFTVKKEGKIEDGCF-----YSEWKEGNMVEXXXXX 3143
            KP+PLWTGKQ+I  +L+H+TRG PPFTV+K+GKI    F     +   K     +     
Sbjct: 715  KPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNKDKERE 774

Query: 3142 XXXXXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFL 2963
                     ++I+KN L+ GVIDK QF  YG+VHT QE YGSN AGILLS  SRLFT FL
Sbjct: 775  RNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRLFTAFL 834

Query: 2962 QMHGFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAK-IAEPVKLQMEIERAI 2786
            Q+HGFTCGVDDLL+ +  D KR+  LE+ EN G  +H + +G     +P +LQ++IE  I
Sbjct: 835  QLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVGVNDFIDPAELQLKIEEVI 894

Query: 2785 RSHGESAVTYLDMLMSHELNGVTTE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNF 2609
            RS+G+SA+T LD  M   LN ++++ +   ++  GL KP  +NC+SLMTT+GAKG   NF
Sbjct: 895  RSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAKGGTANF 954

Query: 2608 TQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCM 2429
             QISS LGQQ+LEG+RVPRMVSGKTLPCFPPWD A+RAGGFI DRFLTGLRPQEYYFHCM
Sbjct: 955  QQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQEYYFHCM 1014

Query: 2428 AGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKA 2249
            AGREGLVDTA+KTSRSGYLQRCL+KNLECL+V YDHTVRDADGS+VQF YGEDG+DVHK 
Sbjct: 1015 AGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDGIDVHKT 1074

Query: 2248 SFITEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFI--GTLSKKKRDSL 2075
            SF+ +F  L  N  I+  K S +    SN Y+ +LP+AL+ KA  FI    LS  +    
Sbjct: 1075 SFVAKFDALLANHDIMKAKYSTELR-KSNSYITDLPEALKDKANKFICDRNLSVPRLARN 1133

Query: 2074 HLRKQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLG 1895
             + K ++ +  V+ KY SSLAQPGE VG++AAQSVGEPSTQMTLNTFHHAG+GEMNVTLG
Sbjct: 1134 EILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLG 1193

Query: 1894 IPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFS 1715
            IPRLQEIL  AS  I+TPIMTCPL +G ++ +A  LA KLK ++VA+++ESMEV VVPF+
Sbjct: 1194 IPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIESMEVAVVPFA 1253

Query: 1714 VHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIR 1535
            V+     +IYKLKMKL  P+++      +++ CEE LEV ++RELED+IQ+H+ +LSKI 
Sbjct: 1254 VNNHQVCSIYKLKMKLKRPKVF------SVKHCEEILEVVYLRELEDAIQNHLLLLSKIS 1307

Query: 1534 GIKAVTNSEEHNTTKETSEEEPGSISHQV---XXXXXXXXXXXXXXXXXXXXXDAQKRKW 1364
            GIK  T+S       ET E+  GS S                           D QKRK 
Sbjct: 1308 GIKNFTSS-------ETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLGFDGQKRKR 1360

Query: 1363 QAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVED-----DGDYTLGGESEIME 1199
            QA DEM+Y+DG        E+E  E E S G ES+ DQ  D     DGD   G   EI+ 
Sbjct: 1361 QATDEMEYEDG-------YEEERNEPELSAGLESDGDQANDVDIGEDGDGPPGIAPEIV- 1412

Query: 1198 GEDQIFDAEDEAPGSPSKPDYLSKLKESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKG 1019
                          SPSK     K  +S+ E K + + +      + K+ DRAI V   G
Sbjct: 1413 --------------SPSKTKKSKKNAKSDDEGKKRVRTK------VIKEFDRAIFVAANG 1452

Query: 1018 LKFEAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIG--------YEEDNKK-- 869
            L FE HF F +EPH            KVY++ S  I+ C VI         Y ED K+  
Sbjct: 1453 LDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQ 1512

Query: 868  ------GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEV 707
                   E  P++ T G +F A W +QD LDIR I SNDI+AML TYGVEAAR TI++EV
Sbjct: 1513 KIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREV 1572

Query: 706  YNVFKPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEA 527
             NVF  Y ISVD+RHLTLIAD+MT  GGYRPMNR G      SP  KMSFETA+KFIV+A
Sbjct: 1573 QNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDA 1632

Query: 526  ALHGEVERLESPSARICLGLPVKMGTGCFDLM 431
            A HG V+ LE+PSARICLGLP+KMGTG FDL+
Sbjct: 1633 AYHGVVDNLETPSARICLGLPMKMGTGSFDLL 1664


>XP_017414824.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1 [Vigna
            angularis] XP_017414825.1 PREDICTED: DNA-directed RNA
            polymerase I subunit 1 isoform X2 [Vigna angularis]
            BAT96398.1 hypothetical protein VIGAN_08333300 [Vigna
            angularis var. angularis]
          Length = 1646

 Score = 1712 bits (4435), Expect = 0.0
 Identities = 914/1693 (53%), Positives = 1150/1693 (67%), Gaps = 44/1693 (2%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            FSF T ++++  S  KIT+P+  + +  PVPGGL+D A+GP+DD   CKSCGQ + LCPG
Sbjct: 17   FSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDDKSLCKSCGQASKLCPG 76

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVR-- 5024
            H GHI+LV+PVYNPL+F IL ++I++ CF C+HF+  R++V    +QL+LI+KGD +R  
Sbjct: 77   HFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRKEVDMRTTQLELIMKGDIIRAK 136

Query: 5023 -------DLCEEDGVTDTSVHTKERSSTSNWTSFQYHEVKSILNKFMGENFKKCQNCGAN 4865
                   D     G  D S H        NWTS Q+ E  SIL KF+   +KKCQNCG  
Sbjct: 137  SLDSINLDEFTHSGDGDESHHCSAEQQGENWTSLQFSEAMSILKKFLKRQYKKCQNCGVV 196

Query: 4864 NPKITSPTFGWFQMDDMLNADT-RANIIKGCKLDETFVRGAEPRSFMDGDAQNADDTMLG 4688
            NPKI+ PTFGWF M+ +L+AD  RAN I+                 ++ +  N D ++ G
Sbjct: 197  NPKISKPTFGWFHMN-VLSADAARANTIR----------------VVESEINNDDMSLGG 239

Query: 4687 GNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVKNLLKL 4508
            G + +  D    GAV          + K K G L  +   Q KL SG LLPS+VK +L+L
Sbjct: 240  GETTDEEDISSVGAVK---------RDKRKKGNLSHKLAAQNKL-SGSLLPSQVKGILEL 289

Query: 4507 LWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEVEHPQS 4328
            LWENEARLCS I DIQ Q     GK    SMFF+E + VPP KFRPP++     +EHPQ+
Sbjct: 290  LWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPAKAGDDVMEHPQT 346

Query: 4327 VLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAIRQKDRGTSGICQL 4148
            VLL+ V+Q N+SLG+A++N  +  K+++RWM+LQQ+IN+LFDS+ A  Q+D   +GICQL
Sbjct: 347  VLLTKVLQGNISLGEAHINKLDPSKVLSRWMDLQQSINLLFDSKTASGQRDVA-AGICQL 405

Query: 4147 IEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTPWNVNKL 3968
            +EKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L+YPERVTPWN  KL
Sbjct: 406  LEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAIRLSYPERVTPWNAMKL 465

Query: 3967 RHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSLDSEFEG 3788
            R+A++NG + HPGATHY+DK + V+L                 RG +   GK  D EFEG
Sbjct: 466  RNAILNGPDSHPGATHYSDKQATVKLQRSPKLLAMISRKLPSSRGVILDQGKISDQEFEG 525

Query: 3787 KVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMN 3608
            KVVYRH++DGD+VLVNRQPTLHKPS+MAH+VRVLKGEKT+RMHYANCSTYNADFDGDE+N
Sbjct: 526  KVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEIN 585

Query: 3607 VHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLTRDEYHM 3428
            VHFPQDEISRAEA  I NAN QY+ PTSG PIR LIQDHIVSA LLTKKDTF+T +E++ 
Sbjct: 586  VHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSASLLTKKDTFITYEEFNQ 645

Query: 3427 LLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITTILNHIT 3248
            LLY+SGVS A  GS+ GK GQKV   +S+ E+   PP IWKP+PLWTGKQVI+ +L +IT
Sbjct: 646  LLYSSGVSMAGVGSFSGKHGQKVFMTNSECEMFLFPPAIWKPEPLWTGKQVISALLYYIT 705

Query: 3247 RGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXKLIIWKNELVHGVIDKN 3068
            RG PPFTV+K  KI    F ++ +EG                 KL+I+KN LV GV+DK 
Sbjct: 706  RGSPPFTVEKNAKIPSNFFKTQVREGERYTRDKSRDKDLPDEDKLLIYKNNLVRGVVDKA 765

Query: 3067 QFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQHSDLKRKMI 2888
            QF  YG++HTVQEFYGSN AG LLS LSRLFT FLQMHGFTCGVDDL+I++  D++R   
Sbjct: 766  QFGDYGIIHTVQEFYGSNVAGNLLSALSRLFTSFLQMHGFTCGVDDLMIIEEKDVERMNQ 825

Query: 2887 LEKHENTGANIHSKFIGAKIAEPV---KLQMEIERAIRSHGESAVTYLDMLMSHELNGVT 2717
            L   E  G  +H +FIG    + +    +Q+ IE+ +RS+GE+A+TYLD  M   LN  T
Sbjct: 826  LSSCEEIGDIVHREFIGVMNGDNIDTTTMQLNIEKKVRSNGEAALTYLDRKMISNLNSRT 885

Query: 2716 TE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLLGQQQLEGKRVPRMVSG 2540
            +  +   ++  G+LKP  +NC+SLMTT+GAKGS VNF QISS LGQQ+LEGKRVPRMVSG
Sbjct: 886  SSGILKELLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSG 945

Query: 2539 KTLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLVDTAIKTSRSGYLQRCL 2360
            KTLPCF PWD + RAGGFI DRFLTGL PQEYYFHCMAGREGLVDTA+KTSRSGYLQRCL
Sbjct: 946  KTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 1005

Query: 2359 IKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFKLLAQNQRIILEKLSGQ 2180
            +KNLECL+VCYDHTVRDADGS++QF YGEDGVDVH+ SFI +F+ L+ N+ ++      Q
Sbjct: 1006 MKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRQ 1065

Query: 2179 HEDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLR----KQKNLMNLVKFKYLSSLA 2012
              D S+ Y+N+LPDAL+GKA++F        RDSL  R    K+++L+ L++ KY+S LA
Sbjct: 1066 -LDRSSPYINKLPDALKGKAENFF-------RDSLKQRNLGLKRRDLLKLMEHKYVSCLA 1117

Query: 2011 QPGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQEILQRASAKIRTPIMT 1832
            QPGE+VGVLA+QSVGEP+TQMTLNTFH AG+GEMNVTLGIPRLQEI+  AS  I+TP MT
Sbjct: 1118 QPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMT 1177

Query: 1831 CPLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGASTIYKLKMKLFPPEL 1652
            CPLR   +  +A  LA KLK ++VADI++SM+V VV  +VH G   +IYKL MKL+ P+ 
Sbjct: 1178 CPLRPNKSMEDAICLADKLKKITVADIIKSMKVSVVQVTVHAGQVCSIYKLVMKLYKPKQ 1237

Query: 1651 YPPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAVTNSEEHNTTKETSE-- 1478
            YP Y+DITLED E+TL V F+RELED+I+SH+ +LSKI GIK      + N +  + +  
Sbjct: 1238 YPKYTDITLEDWEDTLRVFFVRELEDAIESHMALLSKISGIKKFKTDPQSNYSNSSEDGH 1297

Query: 1477 --EEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYDDGMESKVPIVE 1304
              E       +                      DAQKRK Q  DE+DY+DG        E
Sbjct: 1298 GNESESETKGKNKDDDDDDGVVEDTEGYEDLGSDAQKRKRQGTDEVDYEDG-------PE 1350

Query: 1303 DELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGE-DQIFDAEDEAPGSPSKPDYLSK 1127
            +E+ + EQS       ++ E+D D   G + ++ E + D   DA +            S+
Sbjct: 1351 EEMHDGEQS-------EETENDED---GSDVDVNENDNDMTLDANN------------SQ 1388

Query: 1126 LKESNSELKP-----KAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFRDEPHXXXXX 962
              E +S+ KP       K+ K +   I KK DRA+ V  KG+ FE HF F  EPH     
Sbjct: 1389 GLEKSSKFKPIVEKNSLKREKKKSKAITKKYDRAVFVKAKGMHFEIHFKFTGEPHILLAQ 1448

Query: 961  XXXXXXXKVYVKRSENIDRC--------SVIGYEEDNKK--------GEVTPSLQTAGVN 830
                   KV ++    +  C         VI Y ED +          E  P+LQT+G++
Sbjct: 1449 IAQRTAKKVCIQNFGRVGECKAITCKESGVIYYGEDGRNRDDIPASMKEKIPALQTSGIH 1508

Query: 829  FRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVDIRHLTLI 650
            F+ FW LQD+LD+R I SN ++AML+ YGVEAAR TI++EV NVFK Y ISV+IRHLTLI
Sbjct: 1509 FKTFWELQDDLDVRYIYSNSVHAMLSAYGVEAARETIIREVQNVFKSYGISVNIRHLTLI 1568

Query: 649  ADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESPSARICLG 470
            AD+MT  GGY PMNR G     TSP  KM FETA+KFIVEAA HG+V+ LE+PS+RICLG
Sbjct: 1569 ADFMTHSGGYSPMNRTGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLG 1628

Query: 469  LPVKMGTGCFDLM 431
            LPVK+GTGC DL+
Sbjct: 1629 LPVKVGTGCHDLI 1641


>XP_011020318.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score = 1711 bits (4432), Expect = 0.0
 Identities = 944/1727 (54%), Positives = 1155/1727 (66%), Gaps = 78/1727 (4%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            FSF TDEEV  HSF KITS    D + +PVPGGL+D A+GP+ D  PCK+CGQ +  C G
Sbjct: 16   FSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE-PCKTCGQRSTNCTG 74

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV--- 5027
            HCGHIDL++PVYNPLLF  LH L+++ CFFC HFR    +V+ + SQL+LIIKGD V   
Sbjct: 75   HCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLELIIKGDVVGAK 134

Query: 5026 ---------RDLCEE-DGVTDT--SVHT------KERSSTSNWTSFQYHEVKSILNKFMG 4901
                       L E+ DG +++  ++H+       E+S  S WTS Q  E  SILN F+ 
Sbjct: 135  RLDSFSPIEASLPEDSDGSSESCSTIHSGAPHPNNEQSKQSEWTSLQLSEAMSILNNFLK 194

Query: 4900 ENFKKCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDG 4721
               KKC+NC A+NP I  PTFGWF    + NA  R+N+IK   ++  F    E       
Sbjct: 195  LESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPFGGAFE------- 247

Query: 4720 DAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPL 4541
            +  +A+D     N+ ES               N ++K   K   L  +F  Q+  LS  L
Sbjct: 248  ELIDAEDATKSPNNKESAT-------------NRNLKEHQK---LQHQFTSQKDALSSQL 291

Query: 4540 LPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSS-SMFFIEALLVPPNKFRPPS 4364
            LPSE  ++LKLLW+NEA LCSL+ DIQQQ +   GK ++  SMFF+  +LVPP KFRPP+
Sbjct: 292  LPSEAMDILKLLWKNEAGLCSLMSDIQQQGV---GKKKAGHSMFFLNTVLVPPIKFRPPT 348

Query: 4363 RKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAIR 4184
            +     +EHP SVLLS V++LN SL  A+ +N +   I  RW+ LQQ+INVLFDS  A  
Sbjct: 349  KGGDSVMEHPLSVLLSKVLELNGSLADAHRSN-DFPLIARRWLELQQSINVLFDSNTAKG 407

Query: 4183 QKDRGTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTY 4004
            QKD   SGICQ++EKKEG+FRQKMMGKRVN+ACRSVISPDPYL VNEIG+PP FAVKLTY
Sbjct: 408  QKDV-ISGICQILEKKEGMFRQKMMGKRVNYACRSVISPDPYLDVNEIGVPPCFAVKLTY 466

Query: 4003 PERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVT 3824
            PERVTPWNV KLR+A++NG E HPGATHY DK S  +LP                  A  
Sbjct: 467  PERVTPWNVAKLRNAVINGPESHPGATHYVDKLSTTKLPPNRKMRVSV---------ARK 517

Query: 3823 HPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCS 3644
              G+S D E+EGK+VYRH+QDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKTLRMHYANCS
Sbjct: 518  LSGRSFDYEYEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS 577

Query: 3643 TYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTK 3464
            TYNADFDGDEMNVHFPQDE+SRAE   I NAN QY+ P++G PIR LIQDHI+SAVLLTK
Sbjct: 578  TYNADFDGDEMNVHFPQDEVSRAEGYNIVNANNQYVRPSNGEPIRSLIQDHIISAVLLTK 637

Query: 3463 KDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTG 3284
            KDTFLT DE + LLY+SGVS A   S+ G+ G+KV  LS +DEI+ L P I KP  LW+G
Sbjct: 638  KDTFLTEDEVYQLLYSSGVSNARPTSFSGRAGRKVIFLSYEDEIETLDPAIRKPIYLWSG 697

Query: 3283 KQVITTILNHITRGRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXK---- 3116
            KQ+IT +LNHITRG PPFTV+K GK+    F S+ K G                 +    
Sbjct: 698  KQLITAVLNHITRGHPPFTVEKGGKLSYDFFKSKIKNGKSSNGEKVGVSKPMKEKESGKV 757

Query: 3115 -----------LIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNTAGILLSVLSRLFTV 2969
                       +II++N LV GVIDK QF +YG+VHTVQE +G+  AG LLSV SRLFT 
Sbjct: 758  NPKEKQLEDDKMIIFRNVLVQGVIDKAQFGEYGLVHTVQELFGAKAAGTLLSVFSRLFTA 817

Query: 2968 FLQMHGFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAKIA----EPVKLQME 2801
            +LQMHGFTCGVDDLLI +  D +RK  LE  E  G  IH KFIG K      +P++LQ  
Sbjct: 818  YLQMHGFTCGVDDLLITKIKDDERKKQLENCEKCGEQIHRKFIGIKDENIKIDPLELQSN 877

Query: 2800 IERAIRSHGESAVTYLDMLMSHELNGVTTE-VNDAIIPNGLLKPFPRNCLSLMTTTGAKG 2624
            IE+ IRS GESA+TYLD  M++ELN  T+  V + ++  GLLKP  +NC+SLMTT+GAKG
Sbjct: 878  IEKTIRSDGESALTYLDRQMTNELNSKTSSGVINELLSEGLLKPSGKNCISLMTTSGAKG 937

Query: 2623 SQVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGFIGDRFLTGLRPQEY 2444
            S+VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD AARAGG+I DRFLTGLRPQEY
Sbjct: 938  SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEY 997

Query: 2443 YFHCMAGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGV 2264
            YFHCMAGREGLVDTA+KTSRSGYLQRCLIKNLECLR+ YDHTVRDADGS+VQF YGEDGV
Sbjct: 998  YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGV 1057

Query: 2263 DVHKASFITEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRGKAKDFIGTLSKKKR 2084
            DVH+  FI +F+ LA N+ II EK         N Y++ELP+AL+ KA+ F+  ++ K++
Sbjct: 1058 DVHQTGFIAKFEALAANREIIYEK--SDELGTFNAYISELPEALKEKAEIFLRNIA-KEQ 1114

Query: 2083 DSLHLRKQKNLMNLV--------KFKYLSSLAQPGEAVGVLAAQSVGEPSTQMTLNTFHH 1928
             SLH   +    NLV        K K+  SLAQPGE VGVLAAQSVGEPSTQMTLNTFH 
Sbjct: 1115 SSLHDYTKDRSSNLVEHDFYKLLKQKFFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHL 1174

Query: 1927 AGQGEMNVTLGIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMVSVADIV 1748
            AG+GEMNVTLGIPRLQEIL  ASA I+TPIMTCPL++G T+ +AERL+ KLK V+VADI+
Sbjct: 1175 AGRGEMNVTLGIPRLQEILMTASADIKTPIMTCPLQEGRTKEDAERLSDKLKKVTVADII 1234

Query: 1747 ESMEVCVVPFSVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIRELEDSI 1568
            ESMEV V+PF+V   G   IYKLKMKL+ P  YP ++DI++E+ EETLEV F+RELED+I
Sbjct: 1235 ESMEVSVMPFAVQNDGICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAI 1294

Query: 1567 QSHIKMLSKIRGIKAVTNSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXXXXXXXX 1388
            Q+H+ +LSKI GIK         T  E  E+  G+ISH+                     
Sbjct: 1295 QNHLVLLSKISGIKNFLKESHSGTPIEAEEDVSGNISHE---GENDDDSDDEGEEADDLG 1351

Query: 1387 XDAQKRKWQAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYTLGGESE 1208
             D QKRK Q  DEMDYDDG E  +   E +L  S+  +G ES+ +  + + + +  G   
Sbjct: 1352 LDVQKRKQQVTDEMDYDDGSEGLLNEDEGDLSGSQAPSGSESDTEPADKESEISNTG--- 1408

Query: 1207 IMEGEDQIFDAEDEAPGSPSKPDYLSKLKESNSEL------------KPKAKQRKGRGHL 1064
            +++ + + F+      G+ SKP    K  ES+S++            K KAK +K R  L
Sbjct: 1409 MVDNDSEYFEKPSHL-GNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKL 1467

Query: 1063 IKKKTDRAILVVIKGLKFEAHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRC------ 902
            +KK  DR+I V  KGL FE H  F +EPH            KV ++    + RC      
Sbjct: 1468 VKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVTDCK 1527

Query: 901  --SVIGYEEDNKK--------GEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLN 752
               VI Y +D K+         +  P+L T GV+F  FW +QD+LD+R + SN I+ ML 
Sbjct: 1528 ENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLK 1587

Query: 751  TYGVEAARATILKEVYNVFKPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPL 572
             YGVEAAR TI++E+ +VF  Y ISV+ RHL+LIADYMT  G YRPM+R G      SPL
Sbjct: 1588 AYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPL 1647

Query: 571  CKMSFETATKFIVEAALHGEVERLESPSARICLGLPVKMGTGCFDLM 431
             KMSFETA+KFIVEA LH EV+ LE+PSAR+CLGLPVKMGTG FDLM
Sbjct: 1648 SKMSFETASKFIVEATLHREVDNLEAPSARVCLGLPVKMGTGSFDLM 1694


>XP_015866147.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Ziziphus jujuba]
          Length = 1767

 Score = 1706 bits (4417), Expect = 0.0
 Identities = 938/1768 (53%), Positives = 1152/1768 (65%), Gaps = 118/1768 (6%)
 Frame = -3

Query: 5380 RFSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCP 5201
            +F F TDE+VR HSF K+TSP+  +D+ RP+PGGL+D A+GP+ D   C SCGQ +  CP
Sbjct: 15   QFGFMTDEDVRKHSFVKVTSPILLNDVERPIPGGLYDPAMGPLHDDAYCISCGQRSYFCP 74

Query: 5200 GHCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTV-- 5027
            GHCGHIDLV+PVYNPLLF  L+ L+++ CF C+HFR  R++V    SQL+LI++GD V  
Sbjct: 75   GHCGHIDLVSPVYNPLLFDNLYDLLQRTCFSCYHFRAGRKQVDECISQLELIMRGDVVGA 134

Query: 5026 RDLCEEDGVT-------DTSVHTKERSSTSNWTSFQYHEVKSILNKFMGEN--------- 4895
            ++L  +           D S+     S    WTS  + EV S+L K +  N         
Sbjct: 135  KELDSDSPSQFSYAKDDDGSMCHSAESKQQVWTSLHFTEVMSVLKKVLKPNSAKRDSVKQ 194

Query: 4894 --FK--------KCQNCGANNPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGA 4745
              FK        KC NC A NPKI+ PTFGW     M  A  RAN+I G  ++  F  G 
Sbjct: 195  NPFKQKNKLKTTKCMNCSAKNPKISRPTFGWLHKS-MSGAHIRANVISGSNIEGPFADGH 253

Query: 4744 EPRSFMDGDAQNADDTMLGGNSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQ 4565
            +  S  D +  N  D+    N V+  +++   A+  G   +    HK+KG  +P ++ KQ
Sbjct: 254  QETSVSDEEIIN--DSPPWDNDVDKDNSDAFRALSPGSQSSVKKNHKTKGSKVPNKYFKQ 311

Query: 4564 RKLLSGPLLPSEVKNLLKLLWENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPP 4385
            +K  +GPLLPSEVK +L+LLWENEA+LCSLI +I+ Q     GK  S +MFF+E +LVPP
Sbjct: 312  KKSSTGPLLPSEVKEILRLLWENEAQLCSLICNIRHQGF---GKKASYTMFFLENVLVPP 368

Query: 4384 NKFRPPSRKNGMEVEHPQSVLLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLF 4205
             KFRPP++     +EHPQ+VLL+ V+Q N+ LG A++NNS   KIV+RWM LQQ+INV++
Sbjct: 369  IKFRPPAKGGDSVMEHPQTVLLTKVLQSNIDLGNAHINNSGYAKIVSRWMALQQSINVMY 428

Query: 4204 DSRKAIRQKDRGTSGICQLIEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 4025
            +S+ A  +K+  T GICQL+EKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPY
Sbjct: 429  NSKSAAGRKEMAT-GICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 487

Query: 4024 FAVKLTYPERVTPWNVNKLRHALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXX 3845
            FA++LTYPERVTPWNV KLR A++NG+EIHPGATHY DK S VRL               
Sbjct: 488  FALRLTYPERVTPWNVGKLRDAIINGSEIHPGATHYVDKLSTVRLLARKSRISVSRKLPS 547

Query: 3844 XXRGAVTHPGKSLDSEFEGKVVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLR 3665
               G V H GK  D E EGK VYRH+QDGDIVLVNRQPTLHKPS+MAHVVRVLKGEKT+R
Sbjct: 548  SRGGLVQH-GKFCDYESEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIR 606

Query: 3664 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIV 3485
            MHYANCSTYNADFDGDEMNVHFPQDEISRAEA  I NAN QY+ PTSG PIR LIQDHIV
Sbjct: 607  MHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIV 666

Query: 3484 SAVLLTKKDTFLTRDEYHMLLYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWK 3305
            SAVLL+KKDTFL  +E++ LLY+SGVS   S S   KFG KV   SS+DE+ PL P I K
Sbjct: 667  SAVLLSKKDTFLRWEEFNQLLYSSGVSAIGSKSLSRKFGHKVFMSSSEDEVFPLLPAIMK 726

Query: 3304 PKPLWTGKQVITTILNHITRGRPPFTVKKEGKI---------EDGCFYSEWKEGNM---- 3164
            P+PLWTGKQVIT +LNHIT+G  PFTV+K+ K+         ED     E + GN     
Sbjct: 727  PEPLWTGKQVITALLNHITKGFLPFTVEKDTKVPRDFFNDKTEDNKSNGENEAGNARSKK 786

Query: 3163 ---------VEXXXXXXXXXXXXXKLIIWKNELVHGVIDKNQFAKYGMVHTVQEFYGSNT 3011
                      +             KL I+KN LV GVIDK QF +YG+VHTVQE YGSNT
Sbjct: 787  VNKRRAQKEADKDRMKMKGEPDEDKLFIYKNNLVRGVIDKAQFGEYGLVHTVQELYGSNT 846

Query: 3010 AGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQHSDLKRKMILEKHENTGANIHSKFIGAK 2831
            AG LLS LSRLFTV+LQMHGFTCGVDDLL+V+  D +RK +L+K +  G  +H +F+  K
Sbjct: 847  AGNLLSALSRLFTVYLQMHGFTCGVDDLLLVEVKDRERKKLLDKCDEIGEEVHCQFVKLK 906

Query: 2830 IAE---PVKLQMEIERAIRSHGESAVTYLDMLMSHELNGVTTEVND--AIIPNGLLKPFP 2666
              E   P+ LQ  IE+ IRS+GE+A+  LD  M  +LN  T++  +   ++  GL KP  
Sbjct: 907  TNEKLDPMILQFNIEKTIRSNGEAALASLDRKMISQLNDRTSKSEELKGLLSKGLYKPPA 966

Query: 2665 RNCLSLMTTTGAKGSQVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDTAARAGGF 2486
            +NC+SLMTT+GAKG  VNF QISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD  +R+GG 
Sbjct: 967  KNCISLMTTSGAKGGAVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDWTSRSGGL 1026

Query: 2485 IGDRFLTGLRPQEYYFHCMAGREGLVDTAIKTSRSGYLQRCLIKNLECLRVCYDHTVRDA 2306
            + DRFL+GL PQEYYFHCMAGREGLVDTA+KTSRSGYLQRCLIKNLECL+VCYD+TVRD+
Sbjct: 1027 VIDRFLSGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDS 1086

Query: 2305 DGSVVQFCYGEDGVDVHKASFITEFKLLAQNQRIILEKLSGQHEDASNCYVNELPDALRG 2126
            DGS++QFCYGEDGVDVH+ SFI   +  A N+  I +K   Q  D SN Y+  LP AL  
Sbjct: 1087 DGSIIQFCYGEDGVDVHQTSFIANIEAFAANKETIYKKCHHQI-DKSNAYIKNLPPALIK 1145

Query: 2125 KAKDFIGTLSKKKRDSLHLRKQKNLMNLVKFKYLSSLAQPGEAVGVLAAQSVGEPSTQMT 1946
            K + F+  LS K+   L  R+   L+ L++ KYLSSLAQPGE VGVLAAQSVGEPSTQMT
Sbjct: 1146 KTEKFVQKLSMKQDHDLLNRE--GLLRLMEHKYLSSLAQPGEPVGVLAAQSVGEPSTQMT 1203

Query: 1945 LNTFHHAGQGEMNVTLGIPRLQEILQRASAKIRTPIMTCPLRKGTTRAEAERLAAKLKMV 1766
            LNTFH AG+GEMNVTLGIPRLQEIL  AS KI+TP MTCPL +G +  +A+RLA KLK +
Sbjct: 1204 LNTFHLAGRGEMNVTLGIPRLQEILMTASEKIKTPFMTCPLHEGISEEDAKRLADKLKKI 1263

Query: 1765 SVADIVESMEVCVVPFSVHQGGASTIYKLKMKLFPPELYPPYSDITLEDCEETLEVSFIR 1586
            +VADI++ M+V V PF++H      IYKL+MKL  PE YP Y+D + ED EETL   F+R
Sbjct: 1264 TVADIIDRMKVSVKPFALHHDKVCRIYKLEMKLHKPEHYPKYADGSSEDWEETLSTVFVR 1323

Query: 1585 ELEDSIQSHIKMLSKIRGIKAVTNSEEHNTTKETSEEEPGSISHQVXXXXXXXXXXXXXX 1406
            +LED I+ H+K+LSKI+GIK      +   + E  E+   + SH                
Sbjct: 1324 QLEDDIEKHVKLLSKIKGIKDFMADPKSKDSNEMEEDFSKNESHH--EEDGDDDGEHGEG 1381

Query: 1405 XXXXXXXDAQKRKWQAKDEMDYDDGMESKVPIVEDELKESEQSTGFESEIDQVEDDGDYT 1226
                   DAQKRK QA DE+DY+D           E+ E   S G +SE D+  +D    
Sbjct: 1382 TDEDLGLDAQKRKQQATDEVDYEDDANR-------EIDEGNMSAGSDSENDESVNDETDN 1434

Query: 1225 LGGESE---IMEGE---DQIFDAEDEAPGSPSKPDYLSKLKESNSELK------------ 1100
            LG + E   I  GE   D   DA+ +   +  K DY    KE   + K            
Sbjct: 1435 LGAKEERHHINHGEGIEDLRLDAQRQKQQATDKMDYEDGCKEKVGDGKMLFGYDSENYET 1494

Query: 1099 ----------------------PKAKQRKGRGHLIKKKT-------DRAILVVIKGLKFE 1007
                                  P+ K     G   + KT       DR I V  KG  FE
Sbjct: 1495 DNPSTKEDTAERQYEAGNLSELPQKKTMSNAGEEKRTKTKLKPNEKDRRIFVAAKGFHFE 1554

Query: 1006 AHFCFRDEPHXXXXXXXXXXXXKVYVKRSENIDRCSVIGYEEDN---------------- 875
             HF F +EPH            KVY++ S N++ C  I  +E+                 
Sbjct: 1555 IHFKFINEPHILLAQIAQEAAQKVYIQSSGNVNHCQQITCKENQVIYYGRNPKDREEISA 1614

Query: 874  KKGEVTPSLQTAGVNFRAFWNLQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVF 695
            K+ E  P+LQTAGV+F  FW LQD LD+R I SNDI+AMLNTYG+EAAR TI++EV NVF
Sbjct: 1615 KEKEKIPALQTAGVDFFTFWKLQDALDVRYIYSNDIHAMLNTYGIEAARETIIREVMNVF 1674

Query: 694  KPYAISVDIRHLTLIADYMTADGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHG 515
            K Y ISV+IRHL+LIAD+MT  G +R MNR G      SPL +M FETATKFI EAA HG
Sbjct: 1675 KSYGISVNIRHLSLIADFMTHTGKFRSMNRLGGISDSISPLSRMCFETATKFIREAAYHG 1734

Query: 514  EVERLESPSARICLGLPVKMGTGCFDLM 431
            E++ LE+PS+RICLGLPVK+GTG FDLM
Sbjct: 1735 EMDDLETPSSRICLGLPVKVGTGSFDLM 1762


>XP_014513718.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2 [Vigna
            radiata var. radiata]
          Length = 1647

 Score = 1706 bits (4417), Expect = 0.0
 Identities = 905/1687 (53%), Positives = 1141/1687 (67%), Gaps = 38/1687 (2%)
 Frame = -3

Query: 5377 FSFFTDEEVRSHSFKKITSPVPFDDMSRPVPGGLHDQALGPVDDGLPCKSCGQNALLCPG 5198
            FSF T ++++  S  KIT+P+  + +  PVPGGL+D A+GP+DD  PCKSCGQ + LCPG
Sbjct: 17   FSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDDKSPCKSCGQASKLCPG 76

Query: 5197 HCGHIDLVAPVYNPLLFRILHTLIRKACFFCHHFRLRREKVQAYASQLDLIIKGDTVRDL 5018
            H GHI+LV+PVYNPL+F IL ++I++ CF C+HF+  R +V    +QL+LI+KGD +R  
Sbjct: 77   HFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRREVDMRTTQLELIMKGDIIRAK 136

Query: 5017 CEEDGVTDTSVHTKERSST---------SNWTSFQYHEVKSILNKFMGENFKKCQNCGAN 4865
              +    D   H+ +              NWTS Q+ E  S+L KF+   +KKCQNCG  
Sbjct: 137  SLDSTNLDEFTHSGDGDENHGCSVEQQGENWTSVQFSETMSVLKKFLKRQYKKCQNCGVV 196

Query: 4864 NPKITSPTFGWFQMDDMLNADTRANIIKGCKLDETFVRGAEPRSFMDGDAQNADDTMLGG 4685
            NPKI+ PTFGWF ++D+    +RANII+                 ++ +  N D ++ GG
Sbjct: 197  NPKISKPTFGWFHVNDLSADASRANIIR----------------VLESEINNDDMSLGGG 240

Query: 4684 NSVESHDTELSGAVDDGMPGNASIKHKSKGGPLPPEFLKQRKLLSGPLLPSEVKNLLKLL 4505
             + +  D     AV          + K K G L  +   Q KL  G LLPS+VK +LK L
Sbjct: 241  ETTDEGDISSVEAVK---------RDKRKKGNLSHKLAAQNKL-PGSLLPSQVKYILKCL 290

Query: 4504 WENEARLCSLIFDIQQQSLFMTGKSRSSSMFFIEALLVPPNKFRPPSRKNGMEVEHPQSV 4325
            WENEARLCS I DIQ Q     GK    SMFF+E + VPP KFRPP++     +EHPQ+V
Sbjct: 291  WENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPAKAGDDVMEHPQTV 347

Query: 4324 LLSTVVQLNLSLGKAYMNNSEREKIVNRWMNLQQTINVLFDSRKAIRQKDRGTSGICQLI 4145
            LL+ V+Q N+SLG A++N  +  K+++RWM+LQQ++N+LFDS+ A  Q+D G +GICQL+
Sbjct: 348  LLTKVLQGNISLGDAHINKLDSSKVLSRWMDLQQSVNLLFDSKTASGQRDVG-AGICQLL 406

Query: 4144 EKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAVKLTYPERVTPWNVNKLR 3965
            EKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA++L+YPERVTPWN  KLR
Sbjct: 407  EKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNAMKLR 466

Query: 3964 HALVNGTEIHPGATHYADKSSIVRLPXXXXXXXXXXXXXXXXRGAVTHPGKSLDSEFEGK 3785
            +A++NG + HPGATHY+DK + V+L                 RG +   GK  D EFEGK
Sbjct: 467  NAILNGPDSHPGATHYSDKQATVKLQRNPKLLSMISRKLPSSRGVILDQGKISDQEFEGK 526

Query: 3784 VVYRHMQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNV 3605
            VVYRH++DGD+VLVNRQPTLHKPS+MAH+VRVLKGEKT+RMHYANCSTYNADFDGDE+NV
Sbjct: 527  VVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINV 586

Query: 3604 HFPQDEISRAEAIEIANANKQYIVPTSGAPIRGLIQDHIVSAVLLTKKDTFLTRDEYHML 3425
            HFPQDEISRAEA  I NAN QY+ PTSG PIR LIQDHIVSA LLTKKDTF+T +E++ L
Sbjct: 587  HFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSASLLTKKDTFITYEEFNQL 646

Query: 3424 LYASGVSTAASGSYVGKFGQKVCTLSSDDEIQPLPPVIWKPKPLWTGKQVITTILNHITR 3245
            LY+SGVS A  GS+ GK GQKV   +S+ E+   PP IWKP+PLWTGKQVI+ +L +ITR
Sbjct: 647  LYSSGVSMAGVGSFSGKHGQKVFMTNSECEMILFPPAIWKPEPLWTGKQVISALLYYITR 706

Query: 3244 GRPPFTVKKEGKIEDGCFYSEWKEGNMVEXXXXXXXXXXXXXKLIIWKNELVHGVIDKNQ 3065
            G PPFTV+K  KI    F ++ +EG                 KL+I+ N LV GV+DK Q
Sbjct: 707  GSPPFTVEKNAKIPSNFFKTQVREGERYTRDKSRDKDLPDEDKLLIYNNNLVRGVVDKAQ 766

Query: 3064 FAKYGMVHTVQEFYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQHSDLKRKMIL 2885
            F  YG++HTVQEFYGSN AG LLS LSRLFT FLQMHGFTCGVDDL+I++  D++R   L
Sbjct: 767  FGDYGIIHTVQEFYGSNVAGNLLSALSRLFTSFLQMHGFTCGVDDLMIIEEKDVERMNQL 826

Query: 2884 EKHENTGANIHSKFIGAKIAEPV---KLQMEIERAIRSHGESAVTYLDMLMSHELNGVTT 2714
               E  G  +H +FIG    + +    +Q+ IE+ +RS+GE+A+TYLD  M   LN  T+
Sbjct: 827  SSCEEIGDIVHREFIGVMNGDNIDTTTMQLNIEKKVRSNGEAALTYLDRKMISNLNSRTS 886

Query: 2713 E-VNDAIIPNGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLLGQQQLEGKRVPRMVSGK 2537
              +   ++  G+LKP  +NC+SLMTT+GAKGS VNF QISS LGQQ+LEGKRVPRMVSGK
Sbjct: 887  SGILKELLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGK 946

Query: 2536 TLPCFPPWDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREGLVDTAIKTSRSGYLQRCLI 2357
            TLPCF PWD + RAGGFI DRFLTGL PQEYYFHCMAGREGLVDTA+KTSRSGYLQRCL+
Sbjct: 947  TLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLM 1006

Query: 2356 KNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKASFITEFKLLAQNQRIILEKLSGQH 2177
            KNLECL+VCYDHTVRDADGS++QF YGEDGVDVH+ SFI +F+ L+ N+ ++      Q 
Sbjct: 1007 KNLECLKVCYDHTVRDADGSIIQFLYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRQ- 1065

Query: 2176 EDASNCYVNELPDALRGKAKDFIGTLSKKKRDSLHLR----KQKNLMNLVKFKYLSSLAQ 2009
             D S+ Y+N+LPD L+GKA++F        RDSL  R    K+++ + L++ KY+S LAQ
Sbjct: 1066 LDRSSPYINKLPDTLKGKAENFF-------RDSLKQRNLGLKRRDFLKLMEHKYVSCLAQ 1118

Query: 2008 PGEAVGVLAAQSVGEPSTQMTLNTFHHAGQGEMNVTLGIPRLQEILQRASAKIRTPIMTC 1829
            PGE+VGVLA+QSVGEP+TQMTLNTFH AG+GEMNVTLGIPRLQEI+  AS  I+TP MTC
Sbjct: 1119 PGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMTC 1178

Query: 1828 PLRKGTTRAEAERLAAKLKMVSVADIVESMEVCVVPFSVHQGGASTIYKLKMKLFPPELY 1649
            PLR   +  +A  LA KLK ++VADI++SM+V VV  +VH G   +IYKL MKL+ P+ Y
Sbjct: 1179 PLRPNKSMEDAICLADKLKKITVADIIKSMKVSVVQVTVHAGQICSIYKLVMKLYKPKQY 1238

Query: 1648 PPYSDITLEDCEETLEVSFIRELEDSIQSHIKMLSKIRGIKAV-----TNSEEHNTTKET 1484
            P Y+DITLED E+TL VSF+RELED+I+SH+ +LSKI GIK       +N    +    +
Sbjct: 1239 PKYTDITLEDWEDTLRVSFVRELEDAIESHMALLSKISGIKKFKTDPQSNYSHSSKNDHS 1298

Query: 1483 SEEEPGSISHQVXXXXXXXXXXXXXXXXXXXXXDAQKRKWQAKDEMDYDDGMESKVPIVE 1304
            +E E  +                          DAQKRK Q  DE+DY+DG E +  I +
Sbjct: 1299 NESESETKGKNKDDDDDEDGVVEDTEGYEDLGSDAQKRKRQGIDEVDYEDGPEEE--IHD 1356

Query: 1303 DELKESEQSTGFESEIDQVEDDGDYTLGGESEIMEGEDQIFDAEDEAPGSPSKPDYLSKL 1124
             E  E  ++    S++D  E+D D TL              ++E     S  KP     +
Sbjct: 1357 GEQSEETENDEDGSDVDVNENDNDMTLDAN-----------NSEGLEKSSKFKP-----I 1400

Query: 1123 KESNSELKPKAKQRKGRGHLIKKKTDRAILVVIKGLKFEAHFCFRDEPHXXXXXXXXXXX 944
             E NS      K+ K +   I KK DRA+ V  KG+ FE HF F  EPH           
Sbjct: 1401 VEKNS-----LKREKKKSKAITKKYDRAVFVKAKGMHFEIHFKFTGEPHILLAQIAQRAA 1455

Query: 943  XKVYVKRSENIDRC--------SVIGYEEDNKKGEVTP--------SLQTAGVNFRAFWN 812
             KV ++    +  C         VI Y ED +  +  P        +LQT+G++F+ FW 
Sbjct: 1456 KKVCIQNFGRVGECKAITCKESGVIYYGEDGRNRDDIPASVKEKIQALQTSGIHFKTFWE 1515

Query: 811  LQDNLDIRNIVSNDIYAMLNTYGVEAARATILKEVYNVFKPYAISVDIRHLTLIADYMTA 632
            LQD+LD+R I SN ++AML+ YGVEAAR TI++EV NVFK Y ISV+IRHLTLIAD+MT 
Sbjct: 1516 LQDDLDVRYIYSNSVHAMLSVYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTH 1575

Query: 631  DGGYRPMNRFGMADSGTSPLCKMSFETATKFIVEAALHGEVERLESPSARICLGLPVKMG 452
             GGY PMNR G     TSP  KM FETA+KFIVEAA HG+V+ LE+PS+RICLGLPVK+G
Sbjct: 1576 SGGYSPMNRTGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKVG 1635

Query: 451  TGCFDLM 431
            TGC DL+
Sbjct: 1636 TGCHDLI 1642